Miyakogusa Predicted Gene

Lj0g3v0213429.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0213429.1 Non Chatacterized Hit- tr|I1JY03|I1JY03_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.46001
PE,88.57,0.0000000008,Copine,Copine,CUFF.13726.1
         (46 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G63970.2 | Symbols:  | Copine (Calcium-dependent phospholipid...    60   2e-10
AT5G63970.1 | Symbols:  | Copine (Calcium-dependent phospholipid...    60   2e-10
AT1G79380.1 | Symbols:  | Ca(2)-dependent phospholipid-binding p...    60   3e-10
AT5G14420.2 | Symbols: RGLG2 | RING domain ligase2 | chr5:464835...    58   1e-09
AT5G14420.4 | Symbols: RGLG2 | RING domain ligase2 | chr5:464835...    58   1e-09
AT5G14420.3 | Symbols: RGLG2 | RING domain ligase2 | chr5:464835...    58   1e-09
AT5G14420.1 | Symbols: RGLG2 | RING domain ligase2 | chr5:464835...    58   1e-09
AT3G01650.1 | Symbols: RGLG1 | RING domain ligase1 | chr3:242734...    55   8e-09
AT1G67800.2 | Symbols:  | Copine (Calcium-dependent phospholipid...    54   1e-08
AT1G67800.4 | Symbols:  | Copine (Calcium-dependent phospholipid...    54   2e-08
AT1G67800.3 | Symbols:  | Copine (Calcium-dependent phospholipid...    54   2e-08
AT1G67800.1 | Symbols:  | Copine (Calcium-dependent phospholipid...    54   2e-08

>AT5G63970.2 | Symbols:  | Copine (Calcium-dependent
           phospholipid-binding protein) family |
           chr5:25607006-25608916 REVERSE LENGTH=367
          Length = 367

 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/35 (80%), Positives = 32/35 (91%)

Query: 8   TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
           +GPTSFAPVIDA I+ VE++N QYHVLVIIADGQV
Sbjct: 136 SGPTSFAPVIDAAINIVEQNNMQYHVLVIIADGQV 170


>AT5G63970.1 | Symbols:  | Copine (Calcium-dependent
           phospholipid-binding protein) family |
           chr5:25607006-25608916 REVERSE LENGTH=367
          Length = 367

 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/35 (80%), Positives = 32/35 (91%)

Query: 8   TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
           +GPTSFAPVIDA I+ VE++N QYHVLVIIADGQV
Sbjct: 136 SGPTSFAPVIDAAINIVEQNNMQYHVLVIIADGQV 170


>AT1G79380.1 | Symbols:  | Ca(2)-dependent phospholipid-binding
           protein (Copine) family | chr1:29860812-29863023 FORWARD
           LENGTH=401
          Length = 401

 Score = 60.1 bits (144), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/35 (68%), Positives = 32/35 (91%)

Query: 8   TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
           +GPTS+ P+IDA +D VE++NGQ+HVLVI+ADGQV
Sbjct: 178 SGPTSYGPLIDAAVDIVEKNNGQFHVLVIVADGQV 212


>AT5G14420.2 | Symbols: RGLG2 | RING domain ligase2 |
           chr5:4648355-4650563 REVERSE LENGTH=468
          Length = 468

 Score = 57.8 bits (138), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/34 (76%), Positives = 29/34 (85%)

Query: 9   GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
           GPTSFAP+ID  +  VE+S GQYHVLVIIADGQV
Sbjct: 222 GPTSFAPIIDMAMTIVEQSGGQYHVLVIIADGQV 255


>AT5G14420.4 | Symbols: RGLG2 | RING domain ligase2 |
           chr5:4648355-4650563 REVERSE LENGTH=468
          Length = 468

 Score = 57.8 bits (138), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/34 (76%), Positives = 29/34 (85%)

Query: 9   GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
           GPTSFAP+ID  +  VE+S GQYHVLVIIADGQV
Sbjct: 222 GPTSFAPIIDMAMTIVEQSGGQYHVLVIIADGQV 255


>AT5G14420.3 | Symbols: RGLG2 | RING domain ligase2 |
           chr5:4648355-4650563 REVERSE LENGTH=468
          Length = 468

 Score = 57.8 bits (138), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/34 (76%), Positives = 29/34 (85%)

Query: 9   GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
           GPTSFAP+ID  +  VE+S GQYHVLVIIADGQV
Sbjct: 222 GPTSFAPIIDMAMTIVEQSGGQYHVLVIIADGQV 255


>AT5G14420.1 | Symbols: RGLG2 | RING domain ligase2 |
           chr5:4648355-4650563 REVERSE LENGTH=468
          Length = 468

 Score = 57.8 bits (138), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/34 (76%), Positives = 29/34 (85%)

Query: 9   GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
           GPTSFAP+ID  +  VE+S GQYHVLVIIADGQV
Sbjct: 222 GPTSFAPIIDMAMTIVEQSGGQYHVLVIIADGQV 255


>AT3G01650.1 | Symbols: RGLG1 | RING domain ligase1 |
           chr3:242734-245062 FORWARD LENGTH=489
          Length = 489

 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 25/34 (73%), Positives = 30/34 (88%)

Query: 9   GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
           GPTSFAP+I+  +  VE+S+GQYHVLVIIADGQV
Sbjct: 256 GPTSFAPIIEMAMTVVEQSSGQYHVLVIIADGQV 289


>AT1G67800.2 | Symbols:  | Copine (Calcium-dependent
           phospholipid-binding protein) family |
           chr1:25421029-25423297 REVERSE LENGTH=453
          Length = 453

 Score = 54.3 bits (129), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 8   TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
           +GPTSFAP+I+  +  VE S GQYHVL+IIADGQV
Sbjct: 212 SGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQV 246


>AT1G67800.4 | Symbols:  | Copine (Calcium-dependent
           phospholipid-binding protein) family |
           chr1:25421029-25423237 REVERSE LENGTH=433
          Length = 433

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 8   TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
           +GPTSFAP+I+  +  VE S GQYHVL+IIADGQV
Sbjct: 192 SGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQV 226


>AT1G67800.3 | Symbols:  | Copine (Calcium-dependent
           phospholipid-binding protein) family |
           chr1:25421029-25423237 REVERSE LENGTH=433
          Length = 433

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 8   TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
           +GPTSFAP+I+  +  VE S GQYHVL+IIADGQV
Sbjct: 192 SGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQV 226


>AT1G67800.1 | Symbols:  | Copine (Calcium-dependent
           phospholipid-binding protein) family |
           chr1:25421029-25423237 REVERSE LENGTH=433
          Length = 433

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 8   TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
           +GPTSFAP+I+  +  VE S GQYHVL+IIADGQV
Sbjct: 192 SGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQV 226