Miyakogusa Predicted Gene

Lj0g3v0213389.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0213389.2 tr|D7KV17|D7KV17_ARALL Calmodulin binding protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_,28.93,5e-18,
,CUFF.13725.2
         (262 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67310.1 | Symbols:  | Calmodulin-binding transcription activ...    97   1e-20

>AT1G67310.1 | Symbols:  | Calmodulin-binding transcription
           activator protein with CG-1 and Ankyrin domains |
           chr1:25198182-25203126 REVERSE LENGTH=1016
          Length = 1016

 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 47/279 (16%)

Query: 16  AKVLRQLEEQLSLNEDSFKEFSPLYSKDEFPHDLTPCQDQILVYKEDISSAFSRPDDHK- 74
            + L+ L+EQLS+ ++      P Y + E    L   +   + +    ++ + RP+++K 
Sbjct: 222 GQALKMLKEQLSIGDEHVNSVDPHYIQPESLDSLQFLEYSDIDHLAQPTTVYQRPENNKL 281

Query: 75  -EHYDGYNGRQDDSRNDYHALLDHDCPDG-------HEKSL------------------- 107
              Y G  G Q  ++ND + L    C  G       H  +L                   
Sbjct: 282 ERCYGGNFGAQYSAKNDSNKL--ERCYGGYVGGAEYHSSNLMLVKNGSGPSGGTGGSGDQ 339

Query: 108 ---SWTEMLESCKPSSVIKLPEQHPYEAFENEKLLSSSRREIIANQESSHWLISNSNNAE 164
              SW ++LE+C+ S  +      P          SS++  +   QE S+W  S SN  +
Sbjct: 340 GSESWKDVLEACEASIPLNSEGSTP----------SSAKGLLAGLQEDSNW--SYSNQVD 387

Query: 165 KNFAFSFPQDIGGVTSPL-YSLEETQGTNSDYYTTFFDQIQIQEPLGTDSSLIVSEKQKF 223
           ++  F  PQD+G    P  YS       N +Y     D ++I  P   +  +  +  QKF
Sbjct: 388 QS-TFLLPQDLGSFQLPASYSALVAPENNGEYCGMMEDGMKIGLPFEQEMRVTGAHNQKF 446

Query: 224 TIREVSPEYCYATETTKVIIIGSFLLPSSDSRWGCMFGD 262
           TI+++SP++ YA ETTKVIIIGSFL   ++S W CMFG+
Sbjct: 447 TIQDISPDWGYANETTKVIIIGSFLCDPTESTWSCMFGN 485