Miyakogusa Predicted Gene

Lj0g3v0213209.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0213209.1 tr|B9GGT7|B9GGT7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_841270 PE=4
SV=1,44,6e-19,Prolamin_like,Prolamin-like domain,CUFF.13713.1
         (183 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G76750.1 | Symbols:  | Protein of unknown function (DUF1278) ...   123   7e-29
AT2G21750.1 | Symbols:  | Protein of unknown function (DUF1278) ...    91   6e-19
AT2G21740.1 | Symbols:  | Protein of unknown function (DUF1278) ...    89   1e-18
AT4G39340.1 | Symbols:  | Protein of unknown function (DUF1278) ...    86   1e-17
AT5G64720.1 | Symbols:  | Protein of unknown function (DUF1278) ...    52   2e-07

>AT1G76750.1 | Symbols:  | Protein of unknown function (DUF1278) |
           chr1:28811107-28811583 FORWARD LENGTH=158
          Length = 158

 Score =  123 bits (309), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 61/113 (53%), Positives = 76/113 (67%), Gaps = 8/113 (7%)

Query: 79  TKISFLVAFVTCATILVAAPSVVESRPLSKPS------TMSLAVRLKLN--SGNCWESLM 130
           +K SF+  F     +L+ A S V +RPL KPS      T SL  RLKL+  +G CW+SLM
Sbjct: 3   SKSSFMATFNIVTLMLMVASSTVTARPLMKPSMGTSSPTTSLVYRLKLDEDTGYCWDSLM 62

Query: 131 QLQACSGEIIAFFMNGETYIGNGCCQAIKVIGHDCWPNIVASLGFTTQETNIL 183
           QLQ CSGE+I FF+NGETYIG GCC AI+ IG  CWP ++  LGFT QE ++L
Sbjct: 63  QLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWPTMIGVLGFTAQEGDML 115


>AT2G21750.1 | Symbols:  | Protein of unknown function (DUF1278) |
           chr2:9283367-9283744 REVERSE LENGTH=125
          Length = 125

 Score = 90.5 bits (223), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 53/112 (47%), Positives = 70/112 (62%), Gaps = 11/112 (9%)

Query: 75  MASPTKISFLVAFVTCATILVAAPSVVESRPLSKPSTMSLAVRLKLNSGN---CWESLMQ 131
           MAS T  SFL  FVT   +LV     V SR L  P   S  +  +L  G    CW++L +
Sbjct: 1   MASNT--SFL--FVTVTLLLVLN---VSSRAL-PPVADSTNIAARLTGGGLMQCWDALYE 52

Query: 132 LQACSGEIIAFFMNGETYIGNGCCQAIKVIGHDCWPNIVASLGFTTQETNIL 183
           L++C+ EI+ FF+NGET +G GCC A+ VI  DCWP ++ SLGFT +ETN+L
Sbjct: 53  LKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAMLTSLGFTLEETNVL 104


>AT2G21740.1 | Symbols:  | Protein of unknown function (DUF1278) |
           chr2:9281986-9282363 REVERSE LENGTH=125
          Length = 125

 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/112 (48%), Positives = 74/112 (66%), Gaps = 11/112 (9%)

Query: 75  MASPTKISFLVAFVTCATILVAAPSVVESRPLSKPSTMSLAVRLKLNSGN---CWESLMQ 131
           MAS T  SFL  F T A +LV   S   + P ++ ST ++A RL  N G    CW +L +
Sbjct: 1   MASNT--SFL--FATIAILLVLNISG-RTLPETEDST-NIAARL--NGGGLMECWNALYE 52

Query: 132 LQACSGEIIAFFMNGETYIGNGCCQAIKVIGHDCWPNIVASLGFTTQETNIL 183
           L++C+ EI+ FF+NGET +G  CCQA++VI  DCWP ++ SLGFT+ ETN+L
Sbjct: 53  LKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDETNVL 104


>AT4G39340.1 | Symbols:  | Protein of unknown function (DUF1278) |
           chr4:18293129-18293512 REVERSE LENGTH=127
          Length = 127

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 72/112 (64%), Gaps = 9/112 (8%)

Query: 75  MASPTKISFLVAFVTCATILVAAPSVVESRPLSKPSTMSLAVRLKLNSGN---CWESLMQ 131
           MAS T  +FL + VT   IL+   + V  R L   S+ ++A RL+  SG    CW +L +
Sbjct: 1   MASNT--TFLFSTVTLLIILLN--TTVSGRDLPAESSTNIAARLQ--SGGLMECWNALYE 54

Query: 132 LQACSGEIIAFFMNGETYIGNGCCQAIKVIGHDCWPNIVASLGFTTQETNIL 183
           L++C+ EI+ FF+NGET +G  CC+++ +I  +CWP ++ SLGFT +E N+L
Sbjct: 55  LKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAMLTSLGFTPEEANVL 106


>AT5G64720.1 | Symbols:  | Protein of unknown function (DUF1278) |
           chr5:25872346-25872813 REVERSE LENGTH=155
          Length = 155

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 8/68 (11%)

Query: 124 NCWESLMQLQACSGEIIAFFMNG--------ETYIGNGCCQAIKVIGHDCWPNIVASLGF 175
           +CW + ++L++C+ EI+ FF++         +  I   CC AI ++  DCW  +  SLG 
Sbjct: 52  DCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVKDCWSVMFTSLGL 111

Query: 176 TTQETNIL 183
           TT E N L
Sbjct: 112 TTMEGNNL 119