Miyakogusa Predicted Gene

Lj0g3v0212909.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0212909.1 NODE_55989_length_591_cov_38.724197.path1.1
         (198 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G30300.1 | Symbols:  | Metallo-hydrolase/oxidoreductase super...   336   5e-93
AT4G03610.2 | Symbols:  | Metallo-hydrolase/oxidoreductase super...   278   2e-75
AT4G03610.1 | Symbols:  | Metallo-hydrolase/oxidoreductase super...   243   5e-65
AT3G13800.1 | Symbols:  | Metallo-hydrolase/oxidoreductase super...   127   6e-30
AT3G13800.2 | Symbols:  | Metallo-hydrolase/oxidoreductase super...   126   7e-30

>AT1G30300.1 | Symbols:  | Metallo-hydrolase/oxidoreductase
           superfamily protein | chr1:10673084-10675061 FORWARD
           LENGTH=324
          Length = 324

 Score =  336 bits (862), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 155/197 (78%), Positives = 178/197 (90%)

Query: 2   VPNVMCLIQPSNPPCSVCVQSLTLPPDRNPNYRCNTSLLIDYRESNGDHNYILIDVGKTF 61
           VPN MCLIQ S+ PC VC QSL++PP++NPNYR NTSLLIDY +S+G H YI IDVGKTF
Sbjct: 33  VPNAMCLIQRSDNPCYVCSQSLSIPPEKNPNYRGNTSLLIDYCQSDGKHKYIQIDVGKTF 92

Query: 62  REGVLRWFTSHQIPRIDSIILTHEHADAVLGLDDIRAVQPFSPTNDIEPTPIYLSQHSMD 121
           RE VLRWFT H+IP++DSIILTHEHADAVLGLDDIR+VQPFSPTNDI+PTPI++SQ++M+
Sbjct: 93  REQVLRWFTLHKIPQVDSIILTHEHADAVLGLDDIRSVQPFSPTNDIDPTPIFVSQYAME 152

Query: 122 SIAEKFPYLVQKKLKEGQEVRRVAQMSWNIIADDCNQPFSASGLKFTPLPVMHGEDYICL 181
           S+A KFPYLVQKKLKEGQEVRRVAQ+ W +I +DC +PF ASGL FTPLPVMHGEDY+CL
Sbjct: 153 SLAVKFPYLVQKKLKEGQEVRRVAQLDWRVIEEDCEKPFVASGLSFTPLPVMHGEDYVCL 212

Query: 182 GFLFGEKSRVAYISDVS 198
           GFLFGEKSRVAYISDVS
Sbjct: 213 GFLFGEKSRVAYISDVS 229


>AT4G03610.2 | Symbols:  | Metallo-hydrolase/oxidoreductase
           superfamily protein | chr4:1605039-1606909 FORWARD
           LENGTH=295
          Length = 295

 Score =  278 bits (711), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 135/200 (67%), Positives = 165/200 (82%), Gaps = 5/200 (2%)

Query: 2   VPNVMCLIQPSNPPCSVCVQSLTLPPDRNPNYRCNTSLLIDY--RESNGDHNYILIDVGK 59
           VP+  CL+QPS+PPC VC QSL+L P  NPNYRCNTSLLIDY  +E +G H YILIDVGK
Sbjct: 24  VPDFRCLLQPSDPPCHVCSQSLSLLPHLNPNYRCNTSLLIDYCSKEEDGRHKYILIDVGK 83

Query: 60  TFREGVLRWFTSHQIPRIDSIILTHEHADAVLGLDDIRAVQPFSPT-NDIEPTPIYLSQH 118
           +FRE VLRWFT ++IPR+DSIILTHEHADAV GLD+IR++QP   T  D +P P++LSQ 
Sbjct: 84  SFREQVLRWFTFYKIPRVDSIILTHEHADAVHGLDEIRSLQPRGATIVDTDPLPVFLSQF 143

Query: 119 SMDSIAEKFPYLVQKKLKEGQEVRRVAQMSWNIIADDCNQPFSASGLKFTPLPVMHGEDY 178
           +M+SIA +FPYLV+KK+KE    RRV+ + W  I ++C++PF+ASGL FTPLPVMHGEDY
Sbjct: 144 TMESIATRFPYLVEKKVKEVP--RRVSLLDWKNIEENCDEPFAASGLSFTPLPVMHGEDY 201

Query: 179 ICLGFLFGEKSRVAYISDVS 198
           I LGFLFG+KS+VAYISDVS
Sbjct: 202 IALGFLFGDKSKVAYISDVS 221


>AT4G03610.1 | Symbols:  | Metallo-hydrolase/oxidoreductase
           superfamily protein | chr4:1605039-1606917 FORWARD
           LENGTH=303
          Length = 303

 Score =  243 bits (620), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 124/200 (62%), Positives = 151/200 (75%), Gaps = 20/200 (10%)

Query: 2   VPNVMCLIQPSNPPCSVCVQSLTLPPDRNPNYRCNTSLLIDY--RESNGDHNYILIDVGK 59
           VP+  CL+QPS+PPC VC QSL+L P  NPNYRCNTSLLIDY  +E +G H YILIDVGK
Sbjct: 24  VPDFRCLLQPSDPPCHVCSQSLSLLPHLNPNYRCNTSLLIDYCSKEEDGRHKYILIDVGK 83

Query: 60  TFREGVLRWFTSHQIPRIDSIILTHEHADAVLGLDDIRAVQPFSPT-NDIEPTPIYLSQH 118
           +FRE                IILTHEHADAV GLD+IR++QP   T  D +P P++LSQ 
Sbjct: 84  SFRE---------------QIILTHEHADAVHGLDEIRSLQPRGATIVDTDPLPVFLSQF 128

Query: 119 SMDSIAEKFPYLVQKKLKEGQEVRRVAQMSWNIIADDCNQPFSASGLKFTPLPVMHGEDY 178
           +M+SIA +FPYLV+KK+KE    RRV+ + W  I ++C++PF+ASGL FTPLPVMHGEDY
Sbjct: 129 TMESIATRFPYLVEKKVKEVP--RRVSLLDWKNIEENCDEPFAASGLSFTPLPVMHGEDY 186

Query: 179 ICLGFLFGEKSRVAYISDVS 198
           I LGFLFG+KS+VAYISDVS
Sbjct: 187 IALGFLFGDKSKVAYISDVS 206


>AT3G13800.1 | Symbols:  | Metallo-hydrolase/oxidoreductase
           superfamily protein | chr3:4538879-4541366 FORWARD
           LENGTH=361
          Length = 361

 Score =  127 bits (318), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/198 (40%), Positives = 114/198 (57%), Gaps = 18/198 (9%)

Query: 2   VPNVMCLIQPSNPPCSVCVQSLTLPPDRNPNYRCNTSLLIDYRESNGDHNYILIDVGKTF 61
           +P V CL  P    CSVC ++ T P +RN   R NTS+L+ Y   +G  N ILID GK F
Sbjct: 91  IPRVSCLTNPLKT-CSVCTKA-TEPGNRN--RRLNTSILVRYIRPSGTSN-ILIDCGKFF 145

Query: 62  REGVLRWFTSHQIPRIDSIILTHEHADAVLGLDDIRAVQPFSPTNDIEP-TPIYLSQHSM 120
               LRWF +  +  +D++++TH HADA+ GLDD+R       TN+++P  PIY +   +
Sbjct: 146 YHSALRWFPTFGLRTLDAVVITHSHADAIGGLDDLR-----DWTNNVQPHIPIYTAIRDL 200

Query: 121 DSIAEKFPYLVQKKLKEGQEVRRVAQMSWNIIADDCNQPFSASGLKFTPLPVMHGEDYIC 180
           + + +   YLV   +        V+++ + +I +D  QPF  + LK TPLPV HG +Y  
Sbjct: 201 EVMKKTHYYLVDTSVIIPGAA--VSELEFKVIHED--QPFVVNDLKITPLPVWHGSNYRS 256

Query: 181 LGFLFGEKSRVAYISDVS 198
           LGF FG    V YISDVS
Sbjct: 257 LGFRFGN---VCYISDVS 271


>AT3G13800.2 | Symbols:  | Metallo-hydrolase/oxidoreductase
           superfamily protein | chr3:4539372-4541366 FORWARD
           LENGTH=279
          Length = 279

 Score =  126 bits (317), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 81/198 (40%), Positives = 114/198 (57%), Gaps = 18/198 (9%)

Query: 2   VPNVMCLIQPSNPPCSVCVQSLTLPPDRNPNYRCNTSLLIDYRESNGDHNYILIDVGKTF 61
           +P V CL  P    CSVC ++ T P +RN   R NTS+L+ Y   +G  N ILID GK F
Sbjct: 9   IPRVSCLTNPLKT-CSVCTKA-TEPGNRN--RRLNTSILVRYIRPSGTSN-ILIDCGKFF 63

Query: 62  REGVLRWFTSHQIPRIDSIILTHEHADAVLGLDDIRAVQPFSPTNDIEP-TPIYLSQHSM 120
               LRWF +  +  +D++++TH HADA+ GLDD+R       TN+++P  PIY +   +
Sbjct: 64  YHSALRWFPTFGLRTLDAVVITHSHADAIGGLDDLR-----DWTNNVQPHIPIYTAIRDL 118

Query: 121 DSIAEKFPYLVQKKLKEGQEVRRVAQMSWNIIADDCNQPFSASGLKFTPLPVMHGEDYIC 180
           + + +   YLV   +        V+++ + +I +D  QPF  + LK TPLPV HG +Y  
Sbjct: 119 EVMKKTHYYLVDTSVIIPGAA--VSELEFKVIHED--QPFVVNDLKITPLPVWHGSNYRS 174

Query: 181 LGFLFGEKSRVAYISDVS 198
           LGF FG    V YISDVS
Sbjct: 175 LGFRFGN---VCYISDVS 189