Miyakogusa Predicted Gene

Lj0g3v0212799.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0212799.1 Non Chatacterized Hit- tr|D2UZU4|D2UZU4_NAEGR
Putative uncharacterized protein OS=Naegleria gruberi
,31.78,1e-18,NT5C,5'(3')-deoxyribonucleotidase; HTH_ARAC_FAMILY_2,DNA
binding HTH domain, AraC-type; no
descripti,NODE_60074_length_1689_cov_24.650089.path1.1
         (317 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33140.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...   343   6e-95

>AT4G33140.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr4:15981648-15984135
           FORWARD LENGTH=353
          Length = 353

 Score =  343 bits (881), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 172/284 (60%), Positives = 206/284 (72%), Gaps = 18/284 (6%)

Query: 34  FTLRGCYDASGSVNGNRVFLKKENTKGFSYLPRPPLLGGLEKGTSVRDDGRDANHVNVEH 93
           FTLR C+D+           KK + K  +       L  L  G S  ++   A   ++  
Sbjct: 86  FTLRSCFDSH----------KKPDQKARALTQHRRFLHDLGSGPS--EERAAAGTTDLAD 133

Query: 94  GSPGGNPAIPFCFPDQHASQKLVVAVDVDEVLGNFVSALNKFIADRYSSNHSVSEYHVYE 153
           G  G      F       + K+VVAVD+DEVLGNFVSALN+FIADRY SNHSVSEYHVYE
Sbjct: 134 GR-GAYLRTRF-----QGNDKIVVAVDIDEVLGNFVSALNRFIADRYLSNHSVSEYHVYE 187

Query: 154 FFKIWNCSRDEANNRVHEFFNTPYFKSGIHPIPGAQVALQNLSRFCNLSIVTSRQNAIKD 213
           FFKIWNCSR+EA+ RVHEFF T YFK GIHP+PGA   L  LS++C++S+VTSRQNAIK+
Sbjct: 188 FFKIWNCSRNEADLRVHEFFKTSYFKKGIHPLPGAHKTLHKLSKYCDMSVVTSRQNAIKE 247

Query: 214 HTIEWIDKNFSGLFQEIHFGNHFALDGASRPKSEICRSLNAKVLIDDNPRYAIECAEVGI 273
           HT+EWI+ +F GLF++IHFGNHFAL G SRPKSEICRS  A++LIDDNPRYA ECA +G+
Sbjct: 248 HTLEWIEIHFPGLFKQIHFGNHFALHGESRPKSEICRSFGAEILIDDNPRYAEECANIGM 307

Query: 274 RVLLFDYENSYPWCKTEFADQHPLVKRVKNWEEVEQQLMSLVVS 317
           +VLLFDYENSYPW KTE  D+HPLV RV NWEEVEQQ++SL VS
Sbjct: 308 KVLLFDYENSYPWSKTESVDRHPLVTRVHNWEEVEQQILSLAVS 351