Miyakogusa Predicted Gene

Lj0g3v0211999.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0211999.1 Non Chatacterized Hit- tr|I1JKW6|I1JKW6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,62.79,2e-19,no
description,NULL,NODE_90043_length_251_cov_26.139442.path2.1
         (85 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G14460.1 | Symbols:  | LRR and NB-ARC domains-containing dise...    53   3e-08

>AT3G14460.1 | Symbols:  | LRR and NB-ARC domains-containing disease
            resistance protein | chr3:4851990-4856264 REVERSE
            LENGTH=1424
          Length = 1424

 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 5/79 (6%)

Query: 12   SLRSLSLGNCSSVRSFPGDCLPASLKNLRIKDFRKLEF-----PKQQHELLQSLYINSSC 66
            +L  L +  C S+ SFPG   P +LK L I+D +KL F     P + +  L+ L+I SSC
Sbjct: 1117 NLHELLIIACHSLESFPGSHPPTTLKTLYIRDCKKLNFTESLQPTRSYSQLEYLFIGSSC 1176

Query: 67   DSLTSLLLESFPNLHSLTI 85
             +L +  L  FP L SL+I
Sbjct: 1177 SNLVNFPLSLFPKLRSLSI 1195