Miyakogusa Predicted Gene

Lj0g3v0211729.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0211729.1 Non Chatacterized Hit- tr|G7JTY2|G7JTY2_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,66.74,0,seg,NULL,CUFF.13630.1
         (925 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G44180.1 | Symbols:  | Homeodomain-like transcriptional regul...   439   e-123
AT1G28420.1 | Symbols: HB-1 | homeobox-1 | chr1:9979936-9987460 ...   379   e-105
AT5G44180.2 | Symbols:  | Homeodomain-like transcriptional regul...   224   2e-58
AT4G12750.1 | Symbols:  | Homeodomain-like transcriptional regul...   116   6e-26

>AT5G44180.1 | Symbols:  | Homeodomain-like transcriptional regulator
            | chr5:17783172-17789872 FORWARD LENGTH=1694
          Length = 1694

 Score =  439 bits (1128), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 272/668 (40%), Positives = 377/668 (56%), Gaps = 73/668 (10%)

Query: 20   AEDPEIDDLETETDKKKEVSNSLGFSENTVIESRKDNGEVLQTTDAWPDKVDEGL--APV 77
             EDPE+D      + KKE  N L       +E   +NG++    D  P K + GL   P 
Sbjct: 811  GEDPEVD-----VNLKKEDPNPLKVENLIGVEPLLENGKL----DTVPMKTELGLPLTPS 861

Query: 78   VAEGLNKHKIVSTSSKIAVCSNAVTISDIDGED---VDDSIPGEPWVQGLMEGEYSDLSV 134
            + E +   K   T     +   ++  +  +GED    D+S  GE WVQGL+EG+YS+LS 
Sbjct: 862  LPEEMKDEKRDDT-----LADQSLEDAVANGEDSACFDESKLGEQWVQGLVEGDYSNLSS 916

Query: 135  EERLQAFVALIGVATEGNSIRVXXXXXXXXXXXXKKQMWAEAQLDKRRIKEDYFVKMQPI 194
            EERL A VALIG+ATEGN+IR+            KKQMW E QLDKR  KE+  ++   +
Sbjct: 917  EERLNALVALIGIATEGNTIRIALEERLEVASALKKQMWGEVQLDKR-WKEESLIRANYL 975

Query: 195  SYLCNKNEPAVAFLSEGGKQCALPTADVKHDKDLLTPCDQLEQTNALQENQNNLHSSPLE 254
            SY   K    +A  + G ++ +  +ADV       TP    +  +  Q + NN+ + P  
Sbjct: 976  SYPTAKPGLNIATPASGNQESS--SADV-------TPISSQDPVSLPQIDVNNVIAGP-- 1024

Query: 255  VNMHMQDCSTGPDNYSFQQS-GYAA--EKSRSILKSYIGHLAEQTYMYRALPLGLDRRRN 311
             ++ +Q+   G +N  +QQ  GY A  E+ R+ LK+Y+G+ AE+ Y+YR+LPLG DRRRN
Sbjct: 1025 -SLQLQENVPGVENLQYQQQQGYTADRERLRAQLKAYVGYKAEELYVYRSLPLGQDRRRN 1083

Query: 312  RYWQFITSASRNDPGCGRIFVELRDGCWKLIDSEEGFDALLASLDVRGIRESYLHMMLER 371
            RYW+F  SASRNDPGCGRIFVEL+DG W+LIDSEE FD L+ SLDVRG+RES+LH ML +
Sbjct: 1084 RYWRFSASASRNDPGCGRIFVELQDGRWRLIDSEEAFDYLVKSLDVRGVRESHLHFMLLK 1143

Query: 372  VEMSFKESVRRNVLNSNMRMQNGDTVRRLKTEAVEMAEQDCSADIHCPTTVGIDNLDASE 431
            +E SFKE++RRNV                            +    C  +  +D+ D +E
Sbjct: 1144 IEASFKEALRRNV---------------------------AANPGVCSISSSLDS-DTAE 1175

Query: 432  TSTSFVVQLGKSEADDK-DACTRYQDFEKWMRKECLNSPLLCALKFGKKRCNQLLAICDV 490
             ST+F ++LG S A ++     R+  FEKWM    L+   L A K+G K+ + L  IC +
Sbjct: 1176 ISTTFKIELGDSNAVERCSVLQRFHSFEKWMWDNMLHPSALSAFKYGAKQSSPLFRICRI 1235

Query: 491  CHHVCFFGEVRCPSCHKTFSTCK-NNSSSSEHIAHSEGKVKIGTDYF----SPSSPLRMR 545
            C  + F G++ CPSC +  +         +E +A     ++ G   F    S  SPLR+R
Sbjct: 1236 CAELHFVGDICCPSCGQMHAGPDVGELCFAEQVAQLGDNLRRGDTGFILRSSILSPLRIR 1295

Query: 546  LLKILLSVVEVSLPQEALLPLWTEKYRKPWSIKLEASSSTEDLLQILTALEGAIKREYLA 605
            LLK+ L++VE SLP E L   WTE  RK W +KL +SSS EDL Q+LT LE A+KR++L+
Sbjct: 1296 LLKVQLALVEASLPPEGLEAFWTENLRKSWGMKLLSSSSHEDLYQVLTTLEAALKRDFLS 1355

Query: 606  SNYETAHELLGSLSTSECPINDFIGGERIPVLPWVPCTTSAVALRLMELDACIFYTSRQK 665
            SN+ET  ELLG    +    +D   G  + VLPW+P T   VALRL + D+ I YT  Q 
Sbjct: 1356 SNFETTSELLGLQEGALA--SDLTCG--VNVLPWIPKTAGGVALRLFDFDSSIVYTPDQN 1411

Query: 666  LESEKDKK 673
             +  KDK+
Sbjct: 1412 NDPLKDKE 1419


>AT1G28420.1 | Symbols: HB-1 | homeobox-1 | chr1:9979936-9987460
            FORWARD LENGTH=1705
          Length = 1705

 Score =  379 bits (973), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 232/558 (41%), Positives = 316/558 (56%), Gaps = 47/558 (8%)

Query: 111  VDDSIPGEPWVQGLMEGEYSDLSVEERLQAFVALIGVATEGNSIRVXXXXXXXXXXXXKK 170
            +D+S  G+ W+QGL EG+Y  LSVEERL A VAL+G+A EGNSIR             KK
Sbjct: 927  IDESNQGQSWIQGLTEGDYCHLSVEERLNALVALVGIANEGNSIRTGLEDRMEAANALKK 986

Query: 171  QMWAEAQLDKRRIKEDYFVKMQPISYLCNKNEPAVAFLSEGGKQCALPTADVKHDKDLLT 230
            QMWAEAQLD   +++   + +Q ++   +K E  +           + ++  + D     
Sbjct: 987  QMWAEAQLDNSCMRDVLKLDLQNLA--SSKTESTIGL-------PIIQSSTRERDSFDRD 1037

Query: 231  PCDQLEQTNALQENQNNLHSSPLEVNMHMQDCSTGPDNYSFQQSGYAAEKSRSILKSYIG 290
            P   L++T  L++  N+LH S  E  +  QD +         Q  YA+++SRS LKSYIG
Sbjct: 1038 PSQLLDETKPLEDLSNDLHKSSAERALINQDAN-------ISQENYASKRSRSQLKSYIG 1090

Query: 291  HLAEQTYMYRALPLGLDRRRNRYWQFITSASRNDPGCGRIFVELRDGCWKLIDSEEGFDA 350
            H AE+ Y YR+LPLG DRR NRYW F  S S++DP    +FVEL DG W LIDSEE FD 
Sbjct: 1091 HKAEEVYPYRSLPLGQDRRHNRYWHFAVSVSKSDPCSRLLFVELHDGKWLLIDSEEAFDI 1150

Query: 351  LLASLDVRGIRESYLHMMLERVEMSFKESVRRNV-LNSNMRMQNGDTVRRLKTEAVEMAE 409
            L+ASLD+RGIRES+L +ML+++E SFKE+  +++ L  N  +     V    T++V  + 
Sbjct: 1151 LVASLDMRGIRESHLRIMLQKIEGSFKENACKDIKLARNPFLTEKSVVNHSPTDSVSPSS 1210

Query: 410  QDCSADIHCPTTVGIDNLDASETSTSFVVQLGKSEADDKDACTRYQDFEKWMRKECLNSP 469
               S            N D+ ETSTS  V LG+++ ++K+   R+ DF++WM  E  +S 
Sbjct: 1211 SAISG----------SNSDSMETSTSIRVDLGRNDTENKNLSKRFHDFQRWMWTETYSSL 1260

Query: 470  LLCALKFGKKRCNQLLAICDVCHHVCFFGEVRCPSCHKTFSTCKNNSSSSEHIAHSEGKV 529
              CA K+GKKR ++LLA CD C          C SCH+      ++      +A      
Sbjct: 1261 PSCARKYGKKR-SELLATCDACVASYLSEYTFCSSCHQRLDVVDSSEILDSGLA------ 1313

Query: 530  KIGTDYFSPSSPLRMRLLKILLSVVEVSLPQEALLPLWTEKYRKPWSIKLEASSSTEDLL 589
                   SP  P  +RLLK LL  +E S+P EAL   WTE  RK W  +L  SSS  +LL
Sbjct: 1314 ------VSP-LPFGVRLLKPLLVFLEASVPDEALESFWTEDQRKKWGFRLNTSSSPGELL 1366

Query: 590  QILTALEGAIKREYLASNYETAHELLGSLSTSECPINDFIGGERIPVLPWVPCTTSAVAL 649
            Q+LT+LE AIK+E L+SN+ +A ELLG+ +       D  G   + VLPW+P T SAVAL
Sbjct: 1367 QVLTSLESAIKKESLSSNFMSAKELLGAANAEA----DDQGS--VDVLPWIPKTVSAVAL 1420

Query: 650  RLMELDACIFYTSRQKLE 667
            RL ELDA I Y   +K E
Sbjct: 1421 RLSELDASIIYVKPEKPE 1438


>AT5G44180.2 | Symbols:  | Homeodomain-like transcriptional regulator
            | chr5:17783172-17789872 FORWARD LENGTH=1507
          Length = 1507

 Score =  224 bits (571), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 157/425 (36%), Positives = 228/425 (53%), Gaps = 62/425 (14%)

Query: 20   AEDPEIDDLETETDKKKEVSNSLGFSENTVIESRKDNGEVLQTTDAWPDKVDEGL--APV 77
             EDPE+D      + KKE  N L       +E   +NG++    D  P K + GL   P 
Sbjct: 811  GEDPEVD-----VNLKKEDPNPLKVENLIGVEPLLENGKL----DTVPMKTELGLPLTPS 861

Query: 78   VAEGLNKHKIVSTSSKIAVCSNAVTISDIDGED---VDDSIPGEPWVQGLMEGEYSDLSV 134
            + E +   K   T     +   ++  +  +GED    D+S  GE WVQGL+EG+YS+LS 
Sbjct: 862  LPEEMKDEKRDDT-----LADQSLEDAVANGEDSACFDESKLGEQWVQGLVEGDYSNLSS 916

Query: 135  EERLQAFVALIGVATEGNSIRVXXXXXXXXXXXXKKQMWAEAQLDKRRIKEDYFVKMQPI 194
            EERL A VALIG+ATEGN+IR+            KKQMW E QLDKR  KE+  ++   +
Sbjct: 917  EERLNALVALIGIATEGNTIRIALEERLEVASALKKQMWGEVQLDKR-WKEESLIRANYL 975

Query: 195  SYLCNKNEPAVAFLSEGGKQCALPTADVKHDKDLLTPCDQLEQTNALQENQNNLHSSPLE 254
            SY   K    +A  + G ++ +  +ADV       TP    +  +  Q + NN+ + P  
Sbjct: 976  SYPTAKPGLNIATPASGNQESS--SADV-------TPISSQDPVSLPQIDVNNVIAGP-- 1024

Query: 255  VNMHMQDCSTGPDNYSFQQS-GYAA--EKSRSILKSYIGHLAEQTYMYRALPLGLDRRRN 311
             ++ +Q+   G +N  +QQ  GY A  E+ R+ LK+Y+G+ AE+ Y+YR+LPLG DRRRN
Sbjct: 1025 -SLQLQENVPGVENLQYQQQQGYTADRERLRAQLKAYVGYKAEELYVYRSLPLGQDRRRN 1083

Query: 312  RYWQFITSASRNDPGCGRIFVELRDGCWKLIDSE------EGFDALLASLDVRGIRESY- 364
            RYW+F  SASRNDPGCGRIFVEL+DG W+LIDSE      EG +A         +R+S+ 
Sbjct: 1084 RYWRFSASASRNDPGCGRIFVELQDGRWRLIDSEEASLPPEGLEAFW----TENLRKSWG 1139

Query: 365  -------LHMMLERVEMSFKESVRRNVLNSNMRMQNGDTVRRLKTEAVEMAEQDCSADIH 417
                    H  L +V  + + +++R+ L+SN             +E + + E   ++D+ 
Sbjct: 1140 MKLLSSSSHEDLYQVLTTLEAALKRDFLSSNFET---------TSELLGLQEGALASDLT 1190

Query: 418  CPTTV 422
            C   V
Sbjct: 1191 CGVNV 1195



 Score =  108 bits (271), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/124 (47%), Positives = 76/124 (61%), Gaps = 4/124 (3%)

Query: 550  LLSVVEVSLPQEALLPLWTEKYRKPWSIKLEASSSTEDLLQILTALEGAIKREYLASNYE 609
            L+   E SLP E L   WTE  RK W +KL +SSS EDL Q+LT LE A+KR++L+SN+E
Sbjct: 1113 LIDSEEASLPPEGLEAFWTENLRKSWGMKLLSSSSHEDLYQVLTTLEAALKRDFLSSNFE 1172

Query: 610  TAHELLGSLSTSECPINDFIGGERIPVLPWVPCTTSAVALRLMELDACIFYTSRQKLESE 669
            T  ELLG    +    +D   G  + VLPW+P T   VALRL + D+ I YT  Q  +  
Sbjct: 1173 TTSELLGLQEGALA--SDLTCG--VNVLPWIPKTAGGVALRLFDFDSSIVYTPDQNNDPL 1228

Query: 670  KDKK 673
            KDK+
Sbjct: 1229 KDKE 1232


>AT4G12750.1 | Symbols:  | Homeodomain-like transcriptional regulator
            | chr4:7498009-7503920 REVERSE LENGTH=1131
          Length = 1131

 Score =  116 bits (291), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 173/376 (46%), Gaps = 37/376 (9%)

Query: 290  GHLAEQTYMYRALPLGLDRRRNRYWQFITSASRNDPGCGRIFVEL-RDGCWKLIDSEEGF 348
            G+ A   +  +++ LG DRR NRYW F+ + + NDPG   +F E   DG W++I+++E  
Sbjct: 758  GNRANNVHPMQSVYLGSDRRFNRYWLFLGTCNANDPGHRCVFFESSEDGHWEVINNKEAL 817

Query: 349  DALLASLDVRGIRESYLHMMLERVEMSFKESVRRNVLNSNMRMQNGDTVRRLKTEAVEMA 408
             ALL+ LD RG RE+ L   LE+ E    +++    +  +      D VR   +  V   
Sbjct: 818  RALLSVLDDRGRREARLIESLEKRESFLCQAMLSRQVTQSETAHFTDIVREDSSSPVSDI 877

Query: 409  EQDCSADIHCPTTVGIDNLDASETSTSFVVQLGKSEADDKDACTRYQDFEKWMRKEC--- 465
            + +      C   +  D    S    + V ++G S+ +     +  Q+F+ W+       
Sbjct: 878  DNNL-----CLNEIANDQF--SSQHAAIVFEIG-SKREKSLLWSLIQEFDDWIWANFNFN 929

Query: 466  LNSPLLCALKFGKKRCNQLLAICDVCHHVCFFGEVRCPSCHKTFST-CKNNSSSSEHIAH 524
            LNS     +K  ++     L  C  CH + +  E  C  CH TF          + H A 
Sbjct: 930  LNS-----VKHRRRSYLDSLTRCKSCHDLYWRDEKHCKICHATFEVDIDLEERYAIHAAT 984

Query: 525  SEGKVKIGT--DYFSPSSPLRMRLLKILLSVVEVSLPQEALLPLWTEKYRKPWSIKLEAS 582
               K +  T  D+   SS L+   LK  +  +E ++P++AL+  W +   + W+ +L  S
Sbjct: 985  CMRKEECDTFPDHKVLSSQLQS--LKAAVYAIESAMPEDALIGAWRKSAHRLWAKRLRRS 1042

Query: 583  SSTEDLLQILTALEGAIKREYLASNYETAHELLGSLSTSECPINDFIGGERIPVLPWVPC 642
            SS  ++ Q++    GAI  E+L    +    L+G +      IN F         P +P 
Sbjct: 1043 SSVSEITQVIGDFVGAINEEWLWHCSDQGQTLMGEI------INCF---------PSMPQ 1087

Query: 643  TTSAVALRLMELDACI 658
            TTSA+AL L++LD  I
Sbjct: 1088 TTSAIALWLVKLDTLI 1103



 Score = 69.7 bits (169), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 30/47 (63%), Positives = 40/47 (85%)

Query: 110 DVDDSIPGEPWVQGLMEGEYSDLSVEERLQAFVALIGVATEGNSIRV 156
           ++D+S PGEPW+ GLMEGEYSDLSVEE+L  FVALI + + G++IR+
Sbjct: 639 EIDESHPGEPWLLGLMEGEYSDLSVEEKLDVFVALIDLLSSGSTIRM 685