Miyakogusa Predicted Gene
- Lj0g3v0211669.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0211669.1 tr|A9TWW4|A9TWW4_PHYPA ATP-binding cassette
transporter, subfamily C, member 3, group MRP protein
Pp,33.12,1e-18,PREDICTED: SIMILAR TO ATP-BINDING CASSETTE C5 SPLICING
VARIANT A,NULL; FAMILY NOT NAMED,NULL,gene.g16339.t1.1
(184 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G30400.2 | Symbols: ATMRP1, EST1, ABCC1 | multidrug resistanc... 133 7e-32
AT1G30400.1 | Symbols: ATMRP1, EST1, ABCC1, ATABCC1, MRP1 | mult... 133 7e-32
AT2G34660.2 | Symbols: MRP2, ABCC2, AtABCC2 | multidrug resistan... 127 3e-30
AT2G34660.1 | Symbols: ATMRP2, EST4, MRP2, ABCC2, AtABCC2 | mult... 127 3e-30
AT1G30410.1 | Symbols: ATMRP13, MRP13, ABCC12 | multidrug resist... 61 5e-10
AT1G30420.1 | Symbols: ATMRP12, MRP12, ABCC11 | multidrug resist... 57 5e-09
>AT1G30400.2 | Symbols: ATMRP1, EST1, ABCC1 | multidrug
resistance-associated protein 1 | chr1:10728139-10737697
FORWARD LENGTH=1622
Length = 1622
Score = 133 bits (334), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 113/168 (67%), Gaps = 2/168 (1%)
Query: 19 VLEYGSPEELLKNEESAFNKMVQSTGPANAEYLCSLVF--GRTKNNSGEYNKGQESHTRQ 76
V E+ SPE LL N ES+F+KMVQSTG ANAEYL S+ RT+ +G+ ++ E +
Sbjct: 1449 VQEFSSPENLLSNGESSFSKMVQSTGTANAEYLRSITLENKRTREANGDDSQPLEGQRKW 1508
Query: 77 LVFTHWAAATKFAIASTLSSLHNNLQKPSSKENKDFLDETKDAVTTLQEVLEGKHDEAIE 136
+ WAAA +FA+A +L+S HN+LQ +++ L +TKDAV TL+ VLEGKHD+ IE
Sbjct: 1509 QASSRWAAAAQFALAVSLTSSHNDLQSLEIEDDNSILKKTKDAVVTLRSVLEGKHDKEIE 1568
Query: 137 ETLTKYHVPTYRWWSTLHQVIEGLDILIRLPPDNIQQLEPDFEGRSFD 184
++L + + RWW +L++++EGL ++ RL + +Q + + EG+SFD
Sbjct: 1569 DSLNQSDISRERWWPSLYKMVEGLAVMSRLARNRMQHPDYNLEGKSFD 1616
>AT1G30400.1 | Symbols: ATMRP1, EST1, ABCC1, ATABCC1, MRP1 | multidrug
resistance-associated protein 1 | chr1:10728139-10737697
FORWARD LENGTH=1622
Length = 1622
Score = 133 bits (334), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 113/168 (67%), Gaps = 2/168 (1%)
Query: 19 VLEYGSPEELLKNEESAFNKMVQSTGPANAEYLCSLVF--GRTKNNSGEYNKGQESHTRQ 76
V E+ SPE LL N ES+F+KMVQSTG ANAEYL S+ RT+ +G+ ++ E +
Sbjct: 1449 VQEFSSPENLLSNGESSFSKMVQSTGTANAEYLRSITLENKRTREANGDDSQPLEGQRKW 1508
Query: 77 LVFTHWAAATKFAIASTLSSLHNNLQKPSSKENKDFLDETKDAVTTLQEVLEGKHDEAIE 136
+ WAAA +FA+A +L+S HN+LQ +++ L +TKDAV TL+ VLEGKHD+ IE
Sbjct: 1509 QASSRWAAAAQFALAVSLTSSHNDLQSLEIEDDNSILKKTKDAVVTLRSVLEGKHDKEIE 1568
Query: 137 ETLTKYHVPTYRWWSTLHQVIEGLDILIRLPPDNIQQLEPDFEGRSFD 184
++L + + RWW +L++++EGL ++ RL + +Q + + EG+SFD
Sbjct: 1569 DSLNQSDISRERWWPSLYKMVEGLAVMSRLARNRMQHPDYNLEGKSFD 1616
>AT2G34660.2 | Symbols: MRP2, ABCC2, AtABCC2 | multidrug
resistance-associated protein 2 | chr2:14603267-14612387
FORWARD LENGTH=1623
Length = 1623
Score = 127 bits (320), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 115/168 (68%), Gaps = 6/168 (3%)
Query: 19 VLEYGSPEELLKNEESAFNKMVQSTGPANAEYLCSLVFG--RTKNNSGEYNKGQESHTRQ 76
V E+ SPE LL NE S+F+KMVQSTG ANAEYL SLV R K++S + +GQ +
Sbjct: 1454 VQEFSSPENLLSNEGSSFSKMVQSTGAANAEYLRSLVLDNKRAKDDS-HHLQGQR---KW 1509
Query: 77 LVFTHWAAATKFAIASTLSSLHNNLQKPSSKENKDFLDETKDAVTTLQEVLEGKHDEAIE 136
L + WAAA +FA+A++L+S HN+LQ +++ L T DAV TL+ VLEGKHD+ I
Sbjct: 1510 LASSRWAAAAQFALAASLTSSHNDLQSLEIEDDSSILKRTNDAVVTLRSVLEGKHDKEIA 1569
Query: 137 ETLTKYHVPTYRWWSTLHQVIEGLDILIRLPPDNIQQLEPDFEGRSFD 184
E+L ++++ W S+L++++EGL ++ RL + +QQ + +FEG +FD
Sbjct: 1570 ESLEEHNISREGWLSSLYRMVEGLAVMSRLARNRMQQPDYNFEGNTFD 1617
>AT2G34660.1 | Symbols: ATMRP2, EST4, MRP2, ABCC2, AtABCC2 | multidrug
resistance-associated protein 2 | chr2:14603267-14612387
FORWARD LENGTH=1623
Length = 1623
Score = 127 bits (320), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 115/168 (68%), Gaps = 6/168 (3%)
Query: 19 VLEYGSPEELLKNEESAFNKMVQSTGPANAEYLCSLVFG--RTKNNSGEYNKGQESHTRQ 76
V E+ SPE LL NE S+F+KMVQSTG ANAEYL SLV R K++S + +GQ +
Sbjct: 1454 VQEFSSPENLLSNEGSSFSKMVQSTGAANAEYLRSLVLDNKRAKDDS-HHLQGQR---KW 1509
Query: 77 LVFTHWAAATKFAIASTLSSLHNNLQKPSSKENKDFLDETKDAVTTLQEVLEGKHDEAIE 136
L + WAAA +FA+A++L+S HN+LQ +++ L T DAV TL+ VLEGKHD+ I
Sbjct: 1510 LASSRWAAAAQFALAASLTSSHNDLQSLEIEDDSSILKRTNDAVVTLRSVLEGKHDKEIA 1569
Query: 137 ETLTKYHVPTYRWWSTLHQVIEGLDILIRLPPDNIQQLEPDFEGRSFD 184
E+L ++++ W S+L++++EGL ++ RL + +QQ + +FEG +FD
Sbjct: 1570 ESLEEHNISREGWLSSLYRMVEGLAVMSRLARNRMQQPDYNFEGNTFD 1617
>AT1G30410.1 | Symbols: ATMRP13, MRP13, ABCC12 | multidrug
resistance-associated protein 13 | chr1:10739357-10747017
FORWARD LENGTH=1468
Length = 1468
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 37/51 (72%)
Query: 12 LTISLVNVLEYGSPEELLKNEESAFNKMVQSTGPANAEYLCSLVFGRTKNN 62
L +S VLEY SP+ELL + SAF +MV STGPANA+YL +LVF R +N
Sbjct: 1413 LVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGPANAQYLSNLVFERRENG 1463
>AT1G30420.1 | Symbols: ATMRP12, MRP12, ABCC11 | multidrug
resistance-associated protein 12 | chr1:10748816-10756316
FORWARD LENGTH=1495
Length = 1495
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 34/51 (66%)
Query: 12 LTISLVNVLEYGSPEELLKNEESAFNKMVQSTGPANAEYLCSLVFGRTKNN 62
L +S VLEY SP+ELL + SAF KMV STGP N +YL +LVF R N
Sbjct: 1440 LVLSSGQVLEYDSPQELLSRDTSAFFKMVHSTGPENGQYLSNLVFERRGNG 1490