Miyakogusa Predicted Gene
- Lj0g3v0211269.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0211269.1 tr|G7ITP9|G7ITP9_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_2g0,29.28,3e-18,PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; OS05G0107000 PROTEIN,NULL; FAMILY NOT
,CUFF.13570.1
(356 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 427 e-120
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 262 3e-70
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 9e-70
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 5e-68
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 6e-68
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 5e-65
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 8e-65
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 1e-64
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 241 6e-64
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 6e-64
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 240 1e-63
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 1e-63
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 2e-63
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 4e-63
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 1e-62
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 235 3e-62
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 4e-62
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 234 5e-62
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 233 1e-61
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 3e-61
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 232 3e-61
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 229 2e-60
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 6e-60
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 1e-59
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 1e-59
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 1e-59
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 1e-59
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 4e-59
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 7e-59
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 223 2e-58
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 3e-58
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 3e-58
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 5e-58
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 5e-58
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 1e-57
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 2e-57
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 4e-57
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 7e-57
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 217 1e-56
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 2e-56
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 2e-56
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 2e-56
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 3e-56
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 3e-56
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 4e-56
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 4e-56
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 214 6e-56
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 6e-56
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 1e-55
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 1e-55
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 212 3e-55
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 5e-55
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 5e-55
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 1e-54
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 210 1e-54
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 1e-54
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 1e-54
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 1e-54
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 210 2e-54
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 209 2e-54
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 209 2e-54
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 4e-54
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 4e-54
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 2e-53
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 3e-53
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 3e-53
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 3e-53
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 4e-53
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 5e-53
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 9e-53
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 203 2e-52
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 4e-52
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 201 4e-52
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 6e-52
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 1e-51
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 200 2e-51
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 6e-51
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 6e-51
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 197 6e-51
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 197 1e-50
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 1e-50
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 196 2e-50
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 6e-50
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 8e-50
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 194 9e-50
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 1e-49
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 193 1e-49
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 2e-49
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 2e-49
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 3e-49
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 3e-49
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 8e-49
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 9e-49
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 1e-48
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 1e-48
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 190 1e-48
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 1e-48
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 190 2e-48
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 189 2e-48
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 2e-48
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 189 3e-48
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 3e-48
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 5e-48
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 188 6e-48
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 6e-48
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 7e-48
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 3e-47
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 185 4e-47
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 184 7e-47
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 8e-47
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 1e-46
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 3e-46
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 3e-46
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 5e-46
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 6e-46
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 8e-46
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 181 8e-46
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 181 8e-46
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 1e-45
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 1e-45
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 179 2e-45
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 2e-45
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 179 2e-45
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 3e-45
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 1e-44
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 5e-44
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 9e-44
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 1e-43
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 2e-43
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 3e-43
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 3e-43
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 3e-43
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 4e-43
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 7e-43
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 1e-42
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 2e-42
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 3e-42
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 168 4e-42
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 168 6e-42
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 168 6e-42
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 7e-42
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 2e-41
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 3e-41
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 166 3e-41
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 3e-41
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 1e-40
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 2e-40
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 7e-40
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 2e-39
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 3e-39
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 3e-39
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 159 4e-39
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 5e-39
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 7e-39
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 3e-38
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 154 6e-38
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 1e-37
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 2e-37
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 1e-36
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 149 4e-36
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 3e-35
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 6e-35
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 4e-34
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 2e-32
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 116 3e-26
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 7e-23
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 7e-21
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 98 8e-21
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 1e-20
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 1e-20
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 97 1e-20
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 97 2e-20
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 6e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 7e-20
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 94 1e-19
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 4e-19
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 6e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 5e-18
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 7e-18
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 7e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 1e-17
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 86 4e-17
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-17
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 1e-16
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 84 1e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 1e-16
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 5e-16
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 6e-16
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 7e-16
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 7e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 3e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 4e-15
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 79 4e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 79 5e-15
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 78 9e-15
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 78 1e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 3e-14
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 75 8e-14
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 4e-13
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 69 5e-12
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 6e-12
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 8e-12
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 68 8e-12
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 68 8e-12
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 65 5e-11
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 65 5e-11
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 65 6e-11
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 63 4e-10
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 62 5e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 6e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 62 7e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 62 9e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 60 3e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 60 3e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 59 6e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 3e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 56 5e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 53 3e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 52 7e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 9e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 427 bits (1098), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/332 (61%), Positives = 257/332 (77%), Gaps = 4/332 (1%)
Query: 20 VLGRLL---MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETD 76
++G LL MIED+ QLF M E+DS+SW +MI G QNGL +EAI+ FREM+ + L+ D
Sbjct: 211 LMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMD 269
Query: 77 QYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK 136
QY FGS+L ACGG+ A+ EG Q H+ II+T F+D+IY GSAL+DMYCKC+ + A+TVF
Sbjct: 270 QYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFD 329
Query: 137 EMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE 196
M KNVVSWTAM+VGYGQ G +EEAVKIF DMQ+ G+ PD +TLG IS+C N++SLEE
Sbjct: 330 RMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEE 389
Query: 197 GAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQ 256
G+QFHG A+ SGLI +VTVSN+LV+LYGKCG I+D RLF+EM +D VSWTA+VSAY+Q
Sbjct: 390 GSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQ 449
Query: 257 FGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQD 316
FG+A ETI+LF+ M+ HGLKPD VT GV+S CSR LVEKG + F+ MT E+GI+P
Sbjct: 450 FGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIG 509
Query: 317 HYSCIIDLFSRAGRLEEARDFINQMLFRDSVL 348
HYSC+IDLFSR+GRLEEA FIN M F +
Sbjct: 510 HYSCMIDLFSRSGRLEEAMRFINGMPFPPDAI 541
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 170/365 (46%), Gaps = 33/365 (9%)
Query: 15 WDSYLV-LGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM-RSEM 72
W++ L+ + +I + F + +RD ++W +I G + +GL A+ + M R
Sbjct: 75 WNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFS 134
Query: 73 LETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAE 132
+ T +ML + G Q H +IK GF+ + GS L+ MY + A+
Sbjct: 135 ANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAK 194
Query: 133 TVFKEMSYKNV------------------------------VSWTAMLVGYGQNGYSEEA 162
VF + +N VSW AM+ G QNG ++EA
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEA 254
Query: 163 VKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSL 222
++ F +M+ G+ D + GSV+ +CG L ++ EG Q H + + + V +AL+ +
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314
Query: 223 YGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTF 282
Y KC + +F M K+ VSWTA+V Y Q G+A E +++F M G+ PD T
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 283 IGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQML 342
+S C+ +E+G+Q F G+I + ++ L+ + G ++++ N+M
Sbjct: 375 GQAISACANVSSLEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 343 FRDSV 347
RD+V
Sbjct: 434 VRDAV 438
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 40/274 (14%)
Query: 109 KDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCD 168
+ N+++ + L+ Y K + E+ F+++ ++ V+W ++ GY +G AVK +
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 169 MQK-YGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGK-- 225
M + + TL +++ + + G Q HG + G S++ V + L+ +Y
Sbjct: 129 MMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 226 -----------------------------CGSIEDCHRLFSEMTFKDEVSWTALVSAYSQ 256
CG IED +LF M KD VSW A++ +Q
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQ 247
Query: 257 FGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQD 316
G A E I F M GLK D+ F VL C + +G QI + + + QD
Sbjct: 248 NGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN----FQD 303
Query: 317 HY---SCIIDLFSRAGRLEEARDFINQMLFRDSV 347
H S +ID++ + L A+ ++M ++ V
Sbjct: 304 HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 262 bits (669), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/330 (39%), Positives = 205/330 (62%), Gaps = 6/330 (1%)
Query: 29 DSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM-RSEMLETDQYTFGSMLTAC 87
D+R++F +M E D I WT+++S ++N L+ EA+ +F M R + L D TFG++LTAC
Sbjct: 216 DARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC 275
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
G + L++G + H +I G N+ S+L+DMY KC SV+ A VF MS KN VSW+
Sbjct: 276 GNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWS 335
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
A+L GY QNG E+A++IF +M++ D + G+V+ +C LA++ G + HG +
Sbjct: 336 ALLGGYCQNGEHEKAIEIFREMEE----KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRR 391
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
G V V +AL+ LYGK G I+ R++S+M+ ++ ++W A++SA +Q G+ E + F
Sbjct: 392 GCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFF 451
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSR 327
M+ G+KPD ++FI +L+ C T +V++G F M K +GI P +HYSC+IDL R
Sbjct: 452 NDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGR 511
Query: 328 AGRLEEARDFINQMLFR-DSVLMQLVGQPC 356
AG EEA + + + R D+ L ++ PC
Sbjct: 512 AGLFEEAENLLERAECRNDASLWGVLLGPC 541
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 181/324 (55%), Gaps = 10/324 (3%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ ++R++F +D+ISWTSM+SG H +A++VF EM S L+ +++T S + A
Sbjct: 113 MRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKA 172
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + ++ G H +I GF+ N + S L +Y R A VF EM +V+ W
Sbjct: 173 CSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICW 232
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQK-YGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
TA+L + +N EEA+ +F M + G+VPD T G+V+++CGNL L++G + HG +
Sbjct: 233 TAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLI 292
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
+G+ S V V ++L+ +YGKCGS+ + ++F+ M+ K+ VSW+AL+ Y Q G+ + I
Sbjct: 293 TNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIE 352
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKE--HGIIPIQDHYSCIID 323
+F M + D F VL C+ V G +I + G + ++ S +ID
Sbjct: 353 IFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE---SALID 405
Query: 324 LFSRAGRLEEARDFINQMLFRDSV 347
L+ ++G ++ A ++M R+ +
Sbjct: 406 LYGKSGCIDSASRVYSKMSIRNMI 429
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 133/232 (57%), Gaps = 6/232 (2%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
G+ + ++RQ+F M +++S+SW++++ G QNG H +AI++FREM E D Y FG
Sbjct: 311 GKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFG 366
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
++L AC G+ A++ G + H ++ G N+ SAL+D+Y K + SA V+ +MS +
Sbjct: 367 TVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR 426
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
N+++W AML QNG EEAV F DM K G+ PD + +++++CG+ ++EG +
Sbjct: 427 NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYF 486
Query: 202 GIALVS-GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALV 251
+ S G+ + ++ L G+ G E+ L +++ S W L+
Sbjct: 487 VLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLL 538
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 147/290 (50%), Gaps = 3/290 (1%)
Query: 60 EAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALV 119
EAI + S + + S+L C V + G Q H++++K+G + + G++L+
Sbjct: 44 EAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLL 103
Query: 120 DMYCKC-RSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDD 178
+Y K ++ VF K+ +SWT+M+ GY +A+++F +M +G+ ++
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANE 163
Query: 179 FTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSE 238
FTL S + +C L + G FHG+ + G +S+ L LYG D R+F E
Sbjct: 164 FTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDE 223
Query: 239 MTFKDEVSWTALVSAYSQFGKANETIRLFESM-LTHGLKPDKVTFIGVLSVCSRTRLVEK 297
M D + WTA++SA+S+ E + LF +M GL PD TF VL+ C R +++
Sbjct: 224 MPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQ 283
Query: 298 GNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
G +I + +GI S ++D++ + G + EAR N M ++SV
Sbjct: 284 GKEIHGKLIT-NGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSV 332
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I+ + +++ M R+ I+W +M+S QNG EA+ F +M + ++ D +F ++LTA
Sbjct: 413 IDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTA 472
Query: 87 CGGVMALQEGNQ-----AHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
CG + EG A SY IK G + S ++D+ + + AE + + +
Sbjct: 473 CGHTGMVDEGRNYFVLMAKSYGIKPGTEHY----SCMIDLLGRAGLFEEAENLLERAECR 528
Query: 142 NVVSWTAMLVG 152
N S +L+G
Sbjct: 529 NDASLWGVLLG 539
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 260 bits (665), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 123/312 (39%), Positives = 201/312 (64%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ ++ ++F +R+SI+W++M++G +QNG EA+ +F M S ++ +YT +L A
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNA 331
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + L+EG Q HS+++K GF+ +++A +ALVDMY K + A F + ++V W
Sbjct: 332 CSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALW 391
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
T+++ GY QN +EEA+ ++ M+ G++P+D T+ SV+ +C +LA+LE G Q HG +
Sbjct: 392 TSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK 451
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
G V + +AL ++Y KCGS+ED + +F KD VSW A++S S G+ +E + L
Sbjct: 452 HGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALEL 511
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
FE ML G++PD VTF+ ++S CS VE+G F M+ + G+ P DHY+C++DL S
Sbjct: 512 FEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLS 571
Query: 327 RAGRLEEARDFI 338
RAG+L+EA++FI
Sbjct: 572 RAGQLKEAKEFI 583
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 176/317 (55%), Gaps = 12/317 (3%)
Query: 40 RDSISWTSMISGCTQNG---LHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEG 96
+D +SW S+I+G +QNG + +FREMR++ + + YT + A + + G
Sbjct: 78 KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVG 137
Query: 97 NQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQN 156
QAH+ ++K +IY ++LV MYCK V+ VF M +N +W+ M+ GY
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATR 197
Query: 157 GYSEEAVKIFCDM--QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT 214
G EEA+K+F +K D+ +V+SS + G Q H I + +GL+ FV
Sbjct: 198 GRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVA 257
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
+SNALV++Y KC S+ + ++F ++ ++W+A+V+ YSQ G++ E ++LF M + G
Sbjct: 258 LSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317
Query: 275 LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY---SCIIDLFSRAGRL 331
+KP + T +GVL+ CS +E+G Q+ + K + + H + ++D++++AG L
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK----LGFERHLFATTALVDMYAKAGCL 373
Query: 332 EEARDFINQMLFRDSVL 348
+AR + + RD L
Sbjct: 374 ADARKGFDCLQERDVAL 390
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 166/327 (50%), Gaps = 9/327 (2%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLE--TDQYTFGSM 83
++ED ++F M ER++ +W++M+SG G EAI VF E E Y F ++
Sbjct: 168 LVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAV 227
Query: 84 LTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV 143
L++ + + G Q H IK G + +ALV MY KC S+ A +F +N
Sbjct: 228 LSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNS 287
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGI 203
++W+AM+ GY QNG S EAVK+F M G+ P ++T+ V+++C ++ LEEG Q H
Sbjct: 288 ITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSF 347
Query: 204 ALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANET 263
L G + + ALV +Y K G + D + F + +D WT+L+S Y Q E
Sbjct: 348 LLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEA 407
Query: 264 IRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGI---IPIQDHYSC 320
+ L+ M T G+ P+ T VL CS +E G Q+ T +HG +PI S
Sbjct: 408 LILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV-HGHTIKHGFGLEVPIG---SA 463
Query: 321 IIDLFSRAGRLEEARDFINQMLFRDSV 347
+ ++S+ G LE+ + +D V
Sbjct: 464 LSTMYSKCGSLEDGNLVFRRTPNKDVV 490
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 135/263 (51%), Gaps = 12/263 (4%)
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
L G H II+TG I + LV+ Y KC + A ++F + K+VVSW +++ G
Sbjct: 30 LVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITG 89
Query: 153 YGQNG---YSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
Y QNG S +++F +M+ ++P+ +TL + + +L S G Q H ALV +
Sbjct: 90 YSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAH--ALVVKM 147
Query: 210 ISF--VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
SF + V +LV +Y K G +ED ++F+ M ++ +W+ +VS Y+ G+ E I++F
Sbjct: 148 SSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF 207
Query: 268 ESML---THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
L G D V F VLS + T V G QI +T ++G++ + ++ +
Sbjct: 208 NLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQI-HCITIKNGLLGFVALSNALVTM 265
Query: 325 FSRAGRLEEARDFINQMLFRDSV 347
+S+ L EA + R+S+
Sbjct: 266 YSKCESLNEACKMFDSSGDRNSI 288
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 8/176 (4%)
Query: 176 PDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRL 235
P TL ++ +L G HG + +G + + +N LV+ Y KCG + H +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 236 FSEMTFKDEVSWTALVSAYSQFGKANET---IRLFESMLTHGLKPDKVTFIGVLSVCSRT 292
F+ + KD VSW +L++ YSQ G + + ++LF M + P+ T G+ S
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 293 RLVEKGNQIFESMTKEHGIIPIQDHY--SCIIDLFSRAGRLEEARDFINQMLFRDS 346
+ G Q + K + D Y + ++ ++ +AG +E+ M R++
Sbjct: 132 QSSTVGRQAHALVVK---MSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNT 184
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 254 bits (650), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/320 (40%), Positives = 193/320 (60%), Gaps = 3/320 (0%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+R+LF ++ ERD++SW SMISG ++ G ++A+D+FR+M E E D+ T SML AC
Sbjct: 186 ARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSH 245
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
+ L+ G I + + GS L+ MY KC + SA VF +M K+ V+WTAM
Sbjct: 246 LGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAM 305
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
+ Y QNG S EA K+F +M+K GV PD TL +V+S+CG++ +LE G Q A L
Sbjct: 306 ITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSL 365
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFES 269
+ V+ LV +YGKCG +E+ R+F M K+E +W A+++AY+ G A E + LF+
Sbjct: 366 QHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDR 425
Query: 270 MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAG 329
M + P +TFIGVLS C LV +G + F M+ G++P +HY+ IIDL SRAG
Sbjct: 426 M---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAG 482
Query: 330 RLEEARDFINQMLFRDSVLM 349
L+EA +F+ + + +M
Sbjct: 483 MLDEAWEFMERFPGKPDEIM 502
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 175/319 (54%), Gaps = 12/319 (3%)
Query: 33 LFCDMRERDSISWTSMISGCTQN-GLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
LF E + S+ MI G T H A+ ++R M+ L+ D++T+ + AC +
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLE 146
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLV 151
+ G HS + K G + +++ +L+ MY KC V A +F E++ ++ VSW +M+
Sbjct: 147 EIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMIS 206
Query: 152 GYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS--GL 209
GY + GY+++A+ +F M++ G PD+ TL S++ +C +L L G +A+ GL
Sbjct: 207 GYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL 266
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFES 269
+F+ + L+S+YGKCG ++ R+F++M KD V+WTA+++ YSQ GK++E +LF
Sbjct: 267 STFL--GSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFE 324
Query: 270 MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQI---FESMTKEHGIIPIQDHYSCIIDLFS 326
M G+ PD T VLS C +E G QI ++ +H I + ++D++
Sbjct: 325 MEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVA----TGLVDMYG 380
Query: 327 RAGRLEEARDFINQMLFRD 345
+ GR+EEA M ++
Sbjct: 381 KCGRVEEALRVFEAMPVKN 399
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 124/229 (54%), Gaps = 5/229 (2%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++ +R++F M ++D ++WT+MI+ +QNG EA +F EM + D T ++L+A
Sbjct: 284 LDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSA 343
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
CG V AL+ G Q ++ + + NIY + LVDMY KC V+ A VF+ M KN +W
Sbjct: 344 CGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATW 403
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIAL 205
AM+ Y G+++EA+ +F M V P D T V+S+C + + +G + FH ++
Sbjct: 404 NAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSS 460
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSA 253
+ GL+ + ++ L + G +++ K DE+ A++ A
Sbjct: 461 MFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGA 509
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 254 bits (649), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/361 (35%), Positives = 206/361 (57%), Gaps = 39/361 (10%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ D++++F +M +R+ +SW S+I+ QNG EA+DVF+ M +E D+ T S+++A
Sbjct: 203 VNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISA 262
Query: 87 CGGVMALQEGNQAHSYIIKTG-FKDNIYAGSALVDMYCKCR------------------- 126
C + A++ G + H ++K +++I +A VDMY KC
Sbjct: 263 CASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIA 322
Query: 127 ------------SVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGV 174
S K+A +F +M+ +NVVSW A++ GY QNG +EEA+ +FC +++ V
Sbjct: 323 ETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESV 382
Query: 175 VPDDFTLGSVISSCGNLASLEEGAQFH------GIALVSGLISFVTVSNALVSLYGKCGS 228
P ++ +++ +C +LA L G Q H G SG + V N+L+ +Y KCG
Sbjct: 383 CPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGC 442
Query: 229 IEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSV 288
+E+ + +F +M +D VSW A++ ++Q G NE + LF ML G KPD +T IGVLS
Sbjct: 443 VEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSA 502
Query: 289 CSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFR-DSV 347
C VE+G F SMT++ G+ P++DHY+C++DL RAG LEEA+ I +M + DSV
Sbjct: 503 CGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSV 562
Query: 348 L 348
+
Sbjct: 563 I 563
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 194/377 (51%), Gaps = 44/377 (11%)
Query: 12 IRKWDSYLV-LGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRS 70
I W+S + L +L ++++ LF M ERD +W SM+SG Q+ EA+ F M
Sbjct: 86 IYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHK 145
Query: 71 EMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKS 130
E ++Y+F S+L+AC G+ + +G Q HS I K+ F ++Y GSALVDMY KC +V
Sbjct: 146 EGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVND 205
Query: 131 AETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGN 190
A+ VF EM +NVVSW +++ + QNG + EA+ +F M + V PD+ TL SVIS+C +
Sbjct: 206 AQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACAS 265
Query: 191 LASLEEGAQFHG-IALVSGLISFVTVSNALVSLYGKCGSIED------------------ 231
L++++ G + HG + L + + +SNA V +Y KC I++
Sbjct: 266 LSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS 325
Query: 232 -------------CHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPD 278
+F++M ++ VSW AL++ Y+Q G+ E + LF + + P
Sbjct: 326 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 385
Query: 279 KVTFIGVLSVCSRTRLVEKGNQI--------FESMTKEHGIIPIQDHYSCIIDLFSRAGR 330
+F +L C+ + G Q F+ + E I + + +ID++ + G
Sbjct: 386 HYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGN---SLIDMYVKCGC 442
Query: 331 LEEARDFINQMLFRDSV 347
+EE +M+ RD V
Sbjct: 443 VEEGYLVFRKMMERDCV 459
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 152/305 (49%), Gaps = 32/305 (10%)
Query: 75 TDQYTFGSMLTAC-GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAET 133
TD F +L +C ++ H+ +IK+GF + I+ + L+D Y KC S++
Sbjct: 17 TDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 134 VFKEMSYKNVVSWTA-------------------------------MLVGYGQNGYSEEA 162
VF +M +N+ +W + M+ G+ Q+ EEA
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 163 VKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSL 222
+ F M K G V ++++ SV+S+C L + +G Q H + S +S V + +ALV +
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 223 YGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTF 282
Y KCG++ D R+F EM ++ VSW +L++ + Q G A E + +F+ ML ++PD+VT
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 283 IGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQML 342
V+S C+ ++ G ++ + K + + +D++++ R++EAR + M
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 343 FRDSV 347
R+ +
Sbjct: 317 IRNVI 321
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 205/341 (60%), Gaps = 3/341 (0%)
Query: 9 WICIRKWDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM 68
++C D Y LG+L + + + +D +SWT+MI+G TQ +A+ FR+M
Sbjct: 526 YVCSVLIDMYAKLGKL---DTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 582
Query: 69 RSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSV 128
+ +D+ + ++AC G+ AL+EG Q H+ +GF ++ +ALV +Y +C +
Sbjct: 583 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 642
Query: 129 KSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSC 188
+ + F++ + ++W A++ G+ Q+G +EEA+++F M + G+ ++FT GS + +
Sbjct: 643 EESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAA 702
Query: 189 GNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWT 248
A++++G Q H + +G S V NAL+S+Y KCGSI D + F E++ K+EVSW
Sbjct: 703 SETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWN 762
Query: 249 ALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKE 308
A+++AYS+ G +E + F+ M+ ++P+ VT +GVLS CS LV+KG FESM E
Sbjct: 763 AIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSE 822
Query: 309 HGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLM 349
+G+ P +HY C++D+ +RAG L A++FI +M + L+
Sbjct: 823 YGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALV 863
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 162/308 (52%), Gaps = 1/308 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
IE + F + + + W M+ R + +FR+M+ E + +QYT+ S+L
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + L+ G Q HS IIKT F+ N Y S L+DMY K + +A + + K+VVSW
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSW 559
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
T M+ GY Q + ++A+ F M G+ D+ L + +S+C L +L+EG Q H A V
Sbjct: 560 TTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV 619
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
SG S + NALV+LY +CG IE+ + F + D ++W ALVS + Q G E +R+
Sbjct: 620 SGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRV 679
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
F M G+ + TF + S T +++G Q+ +TK G + + +I +++
Sbjct: 680 FVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYA 738
Query: 327 RAGRLEEA 334
+ G + +A
Sbjct: 739 KCGSISDA 746
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 170/328 (51%), Gaps = 8/328 (2%)
Query: 9 WICIRKWDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM 68
++C Y LG L+ E +F +M +RD++++ ++I+G +Q G +A+++F+ M
Sbjct: 324 YVCNALVSLYFHLGNLISAE---HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 69 RSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSV 128
+ LE D T S++ AC L G Q H+Y K GF N AL+++Y KC +
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 129 KSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSC 188
++A F E +NVV W MLV YG + +IF MQ +VP+ +T S++ +C
Sbjct: 441 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 189 GNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWT 248
L LE G Q H + + V + L+ +Y K G ++ + KD VSWT
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560
Query: 249 ALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFES--MT 306
+++ Y+Q+ ++ + F ML G++ D+V +S C+ + +++G QI ++
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 620
Query: 307 KEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
+P Q+ ++ L+SR G++EE+
Sbjct: 621 GFSSDLPFQN---ALVTLYSRCGKIEES 645
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 169/323 (52%), Gaps = 5/323 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++ +R++F +R +D SW +MISG ++N EAI +F +M + Y F S+L+A
Sbjct: 238 VDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA 297
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + +L+ G Q H ++K GF + Y +ALV +Y ++ SAE +F MS ++ V++
Sbjct: 298 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTY 357
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
++ G Q GY E+A+++F M G+ PD TL S++ +C +L G Q H
Sbjct: 358 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK 417
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
G S + AL++LY KC IE F E ++ V W ++ AY + R+
Sbjct: 418 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 477
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC--IIDL 324
F M + P++ T+ +L C R +E G QI + K + + + Y C +ID+
Sbjct: 478 FRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL---NAYVCSVLIDM 534
Query: 325 FSRAGRLEEARDFINQMLFRDSV 347
+++ G+L+ A D + + +D V
Sbjct: 535 YAKLGKLDTAWDILIRFAGKDVV 557
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 168/335 (50%), Gaps = 5/335 (1%)
Query: 15 WDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLE 74
+D YL G L + ++F +M ER +W MI L E +F M SE +
Sbjct: 127 FDFYLFKGDLY---GAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVT 183
Query: 75 TDQYTFGSMLTAC-GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAET 133
++ TF +L AC GG +A Q H+ I+ G +D+ + L+D+Y + V A
Sbjct: 184 PNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARR 243
Query: 134 VFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLAS 193
VF + K+ SW AM+ G +N EA+++FCDM G++P + SV+S+C + S
Sbjct: 244 VFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIES 303
Query: 194 LEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSA 253
LE G Q HG+ L G S V NALVSLY G++ +FS M+ +D V++ L++
Sbjct: 304 LEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING 363
Query: 254 YSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIP 313
SQ G + + LF+ M GL+PD T ++ CS + +G Q+ TK G
Sbjct: 364 LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK-LGFAS 422
Query: 314 IQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVL 348
+++L+++ +E A D+ + + VL
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVENVVL 457
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 124/296 (41%), Gaps = 20/296 (6%)
Query: 65 FREMRSEMLET-----DQYTFGSMLTACGGVM-ALQEGNQAHSYIIKTGFKDNIYAGSAL 118
F+E R + +E + T +L C +L EG + HS I+K G N L
Sbjct: 67 FQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKL 126
Query: 119 VDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDD 178
D Y + A VF EM + + +W M+ E +F M V P++
Sbjct: 127 FDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNE 186
Query: 179 FTLGSVISSC-GNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFS 237
T V+ +C G + + Q H L GL V N L+ LY + G ++ R+F
Sbjct: 187 GTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD 246
Query: 238 EMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEK 297
+ KD SW A++S S+ E IRLF M G+ P F VLS C + +E
Sbjct: 247 GLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 306
Query: 298 GNQIFESMTKEHGIIPI----QDHYSC--IIDLFSRAGRLEEARDFINQMLFRDSV 347
G Q+ HG++ D Y C ++ L+ G L A + M RD+V
Sbjct: 307 GEQL-------HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV 355
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 244 bits (624), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/317 (39%), Positives = 193/317 (60%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E +RQ+F M ER +SW +MI T+N + EA+D+F EMR+E + ++T S+L+A
Sbjct: 112 VELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSA 171
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
CG E + H +KT N+Y G+AL+D+Y KC +K A VF+ M K+ V+W
Sbjct: 172 CGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTW 231
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
++M+ GY QN EEA+ ++ Q+ + + FTL SVI +C NLA+L EG Q H +
Sbjct: 232 SSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK 291
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
SG S V V+++ V +Y KCGS+ + + +FSE+ K+ W ++S +++ + E + L
Sbjct: 292 SGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMIL 351
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
FE M G+ P++VTF +LSVC T LVE+G + F+ M +G+ P HYSC++D+
Sbjct: 352 FEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILG 411
Query: 327 RAGRLEEARDFINQMLF 343
RAG L EA + I + F
Sbjct: 412 RAGLLSEAYELIKSIPF 428
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 137/230 (59%), Gaps = 2/230 (0%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
MI+D+ Q+F M+++ S++W+SM++G QN + EA+ ++R + LE +Q+T S++
Sbjct: 212 MIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVIC 271
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
AC + AL EG Q H+ I K+GF N++ S+ VDMY KC S++ + +F E+ KN+
Sbjct: 272 ACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL 331
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W ++ G+ ++ +E + +F MQ+ G+ P++ T S++S CG+ +EEG +F +
Sbjct: 332 WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMR 391
Query: 206 VS-GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSA 253
+ GL V + +V + G+ G + + + L + F S W +L+++
Sbjct: 392 TTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 125/252 (49%), Gaps = 1/252 (0%)
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN 142
+L C A+ E H II+ + ++ + L++ Y KC V+ A VF M ++
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
+VSW M+ Y +N EA+ IF +M+ G +FT+ SV+S+CG E + H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
+++ + + + V AL+ LY KCG I+D ++F M K V+W+++V+ Y Q E
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
+ L+ L+ ++ T V+ CS + +G Q+ + K G S +
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKS-GFGSNVFVASSAV 305
Query: 323 DLFSRAGRLEEA 334
D++++ G L E+
Sbjct: 306 DMYAKCGSLRES 317
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 244 bits (622), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 117/315 (37%), Positives = 192/315 (60%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I+ R++F M +D +S+ ++I+G Q+G++ +A+ + REM + L+ D +T S+L
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
+ + +G + H Y+I+ G ++Y GS+LVDMY K ++ +E VF + ++ +SW
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
+++ GY QNG EA+++F M V P SVI +C +LA+L G Q HG L
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
G S + +++ALV +Y KCG+I+ ++F M DEVSWTA++ ++ G +E + L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
FE M G+KP++V F+ VL+ CS LV++ F SMTK +G+ +HY+ + DL
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 491
Query: 327 RAGRLEEARDFINQM 341
RAG+LEEA +FI++M
Sbjct: 492 RAGKLEEAYNFISKM 506
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 174/357 (48%), Gaps = 51/357 (14%)
Query: 34 FCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMAL 93
F ++ ++W S+I T L +A+ F EMR+ D F S+L +C +M L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 94 QEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKS----------------------- 130
+ G H +I++ G ++Y G+AL++MY K + S
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 131 -AET------------VFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPD 177
AET VF+ M K+VVS+ ++ GY Q+G E+A+++ +M + PD
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 178 DFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFS 237
FTL SV+ + +G + HG + G+ S V + ++LV +Y K IED R+FS
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 238 EMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEK 297
+ +D +SW +LV+ Y Q G+ NE +RLF M+T +KP V F V+ C+ +
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 298 GNQIFESMTKEHGIIPIQDHY-------SCIIDLFSRAGRLEEARDFINQMLFRDSV 347
G Q+ HG + ++ + S ++D++S+ G ++ AR ++M D V
Sbjct: 362 GKQL-------HGYV-LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEV 410
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 128/291 (43%), Gaps = 42/291 (14%)
Query: 95 EGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYG 154
+ Q H+ I+T + A S ++ +Y + + A +FK + V++W +++ +
Sbjct: 23 QAKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81
Query: 155 QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT 214
+A+ F +M+ G PD SV+ SC + L G HG + G+ +
Sbjct: 82 DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 215 VSNALVSLYGKC---GS---------------------------------IEDCHRLFSE 238
NAL+++Y K GS I+ R+F
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201
Query: 239 MTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKG 298
M KD VS+ +++ Y+Q G + +R+ M T LKPD T VL + S V KG
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 299 NQIFESMTKEHGIIPIQDHY--SCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+I + ++ GI D Y S ++D+++++ R+E++ +++ RD +
Sbjct: 262 KEIHGYVIRK-GI--DSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 192/318 (60%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++D LF +M ERD +SWTS+I + G +A++ F +MR+ + ++ TF SM +A
Sbjct: 260 MQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSA 319
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + L G Q H ++ G D++ ++++ MY C ++ SA +F+ M ++++SW
Sbjct: 320 CASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISW 379
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
+ ++ GY Q G+ EE K F M++ G P DF L S++S GN+A +E G Q H +AL
Sbjct: 380 STIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALC 439
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
GL TV ++L+++Y KCGSI++ +F E D VS TA+++ Y++ GK+ E I L
Sbjct: 440 FGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDL 499
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
FE L G +PD VTFI VL+ C+ + ++ G F M + + + P ++HY C++DL
Sbjct: 500 FEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLC 559
Query: 327 RAGRLEEARDFINQMLFR 344
RAGRL +A IN+M ++
Sbjct: 560 RAGRLSDAEKMINEMSWK 577
Score = 177 bits (449), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 172/313 (54%), Gaps = 3/313 (0%)
Query: 23 RLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM-RSEMLETDQYTFG 81
R+ I+ S ++F +M R++++WT++I+G G ++E + F EM RSE L +D YTF
Sbjct: 155 RVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL-SDTYTFA 213
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
L AC G+ ++ G H+++I GF + ++L MY +C ++ +F+ MS +
Sbjct: 214 IALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER 273
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
+VVSWT+++V Y + G +AV+ F M+ V P++ T S+ S+C +L+ L G Q H
Sbjct: 274 DVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLH 333
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKAN 261
L GL ++VSN+++ +Y CG++ LF M +D +SW+ ++ Y Q G
Sbjct: 334 CNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGE 393
Query: 262 ETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCI 321
E + F M G KP +LSV ++E G Q+ ++ G+ S +
Sbjct: 394 EGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQV-HALALCFGLEQNSTVRSSL 452
Query: 322 IDLFSRAGRLEEA 334
I+++S+ G ++EA
Sbjct: 453 INMYSKCGSIKEA 465
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 142/272 (52%), Gaps = 3/272 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR--SEMLETDQYTFGSML 84
+ +RQ+F M D +SWTS+I EA+ +F MR + D +L
Sbjct: 56 LRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV 144
ACG + G H+Y +KT ++Y GS+L+DMY + + + VF EM ++N V
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAV 175
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
+WTA++ G G +E + F +M + + D +T + +C L ++ G H
Sbjct: 176 TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHV 235
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
+V G ++ + V+N+L ++Y +CG ++D LF M+ +D VSWT+L+ AY + G+ + +
Sbjct: 236 IVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAV 295
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVC-SRTRLV 295
F M + P++ TF + S C S +RLV
Sbjct: 296 ETFIKMRNSQVPPNEQTFASMFSACASLSRLV 327
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 142/285 (49%), Gaps = 10/285 (3%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMA 92
LF MR RD ISW+++I G Q G E F MR + + S+L+ G +
Sbjct: 367 LFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAV 426
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
++ G Q H+ + G + N S+L++MY KC S+K A +F E ++VS TAM+ G
Sbjct: 427 IEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMING 486
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISF 212
Y ++G S+EA+ +F K G PD T SV+++C + L+ G FH ++ +
Sbjct: 487 YAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG--FHYFNMMQETYNM 544
Query: 213 VTVSN---ALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFGKANETIRLFE 268
+V L + G + D ++ +EM++K D+V WT L+ A G R E
Sbjct: 545 RPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAE 604
Query: 269 SMLTHGLKPDKVT-FIGVLSVCSRTRLVEKGNQIFESMTKEHGII 312
+L L P T + + ++ S T +E+ + ++M K G+I
Sbjct: 605 RILE--LDPTCATALVTLANIYSSTGNLEEAANVRKNM-KAKGVI 646
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 3/223 (1%)
Query: 127 SVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQ--KYGVVPDDFTLGSV 184
++++A VF +M + ++VSWT+++ Y S+EA+ +F M+ + V PD L V
Sbjct: 55 NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVV 114
Query: 185 ISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDE 244
+ +CG +++ G H A+ + L+S V V ++L+ +Y + G I+ R+FSEM F++
Sbjct: 115 LKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNA 174
Query: 245 VSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFES 304
V+WTA+++ G+ E + F M D TF L C+ R V+ G I
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTH 234
Query: 305 MTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ G + + + +++ G +++ M RD V
Sbjct: 235 VIVR-GFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVV 276
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 241 bits (615), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 135/350 (38%), Positives = 199/350 (56%), Gaps = 35/350 (10%)
Query: 34 FCDMRERDSISWTSMISGCTQNGLHREAIDVFREM-RSEMLETDQYTFGSMLTACGGVMA 92
F M ERD ++W SMISG Q G A+D+F +M R +L D++T S+L+AC +
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSA--------------------- 131
L G Q HS+I+ TGF + +AL+ MY +C V++A
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 132 ------------ETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDF 179
+ +F + ++VV+WTAM+VGY Q+G EA+ +F M G P+ +
Sbjct: 355 DGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSY 414
Query: 180 TLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEM 239
TL +++S +LASL G Q HG A+ SG I V+VSNAL+++Y K G+I R F +
Sbjct: 415 TLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLI 474
Query: 240 TF-KDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKG 298
+D VSWT+++ A +Q G A E + LFE+ML GL+PD +T++GV S C+ LV +G
Sbjct: 475 RCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQG 534
Query: 299 NQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVL 348
Q F+ M IIP HY+C++DLF RAG L+EA++FI +M V+
Sbjct: 535 RQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVV 584
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 172/368 (46%), Gaps = 66/368 (17%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
+ F + +RDS+SWT+MI G G + +AI V +M E +E Q+T ++L +
Sbjct: 101 EFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATR 160
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKC---------------RSVKS------ 130
++ G + HS+I+K G + N+ ++L++MY KC R + S
Sbjct: 161 CMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIA 220
Query: 131 ----------AETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV-PDDF 179
A F++M+ +++V+W +M+ G+ Q GY A+ IF M + ++ PD F
Sbjct: 221 LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRF 280
Query: 180 TLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRL---- 235
TL SV+S+C NL L G Q H + +G V NAL+S+Y +CG +E RL
Sbjct: 281 TLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 236 -----------------------------FSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
F + +D V+WTA++ Y Q G E I L
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
F SM+ G +P+ T +LSV S + G QI S K I + + +I +++
Sbjct: 401 FRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS-NALITMYA 459
Query: 327 RAGRLEEA 334
+AG + A
Sbjct: 460 KAGNITSA 467
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 133/241 (55%), Gaps = 6/241 (2%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
D Y+ LG + ++ +F +++RD ++WT+MI G Q+G + EAI++FR M
Sbjct: 355 DGYIKLGDM---NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRP 411
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
+ YT +ML+ + +L G Q H +K+G ++ +AL+ MY K ++ SA F
Sbjct: 412 NSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAF 471
Query: 136 KEMS-YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASL 194
+ ++ VSWT+M++ Q+G++EEA+++F M G+ PD T V S+C + +
Sbjct: 472 DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLV 531
Query: 195 EEGAQ-FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVS 252
+G Q F + V +I ++ +V L+G+ G +++ +M + D V+W +L+S
Sbjct: 532 NQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLS 591
Query: 253 A 253
A
Sbjct: 592 A 592
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 41/269 (15%)
Query: 113 YAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKY 172
++ + ++ Y K + S F ++ ++ VSWT M+VGY G +A+++ DM K
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 173 GVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDC 232
G+ P FTL +V++S +E G + H + GL V+VSN+L+++Y KCG
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 233 HRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG------------------ 274
+F M +D SW A+++ + Q G+ + + FE M
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 275 --------------LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKE----HGIIPIQD 316
L PD+ T VLS C+ + G QI + GI+
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV---- 316
Query: 317 HYSCIIDLFSRAGRLEEARDFINQMLFRD 345
+ +I ++SR G +E AR I Q +D
Sbjct: 317 -LNALISMYSRCGGVETARRLIEQRGTKD 344
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 44/206 (21%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
ERD++SWTSMI Q+G EA+++F M E L D T+ + +AC + +G Q
Sbjct: 477 ERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536
Query: 99 AHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGY 158
DM +K + + +S+ + M+ +G+ G
Sbjct: 537 -------------------YFDM------MKDVDKIIPTLSH-----YACMVDLFGRAGL 566
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV-----SGLISFV 213
+EA + ++K + PD T GS++S+C +++ G L+ SG S
Sbjct: 567 LQEAQEF---IEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYS-- 621
Query: 214 TVSNALVSLYGKCGSIEDCHRLFSEM 239
AL +LY CG E+ ++ M
Sbjct: 622 ----ALANLYSACGKWEEAAKIRKSM 643
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 44/211 (20%)
Query: 176 PDDFTLGSVISSCGNL--ASLEEG-----AQF-HGIALVSGLISFVTVSNALVSLYGKCG 227
P +L +++ C NL S+ + AQ H + SGL+ V + N L+++Y K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 228 SIEDCHRLFSEMTFKDEVSWTALVSAYSQ------------------------------- 256
+LF EM + SW ++SAYS+
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 257 FGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK--EHGIIPI 314
G+ ++ IR+ M+ G++P + T VL+ + TR +E G ++ + K G + +
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 315 QDHYSCIIDLFSRAGRLEEARDFINQMLFRD 345
+ +++++++ G A+ ++M+ RD
Sbjct: 184 SN---SLLNMYAKCGDPMMAKFVFDRMVVRD 211
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 241 bits (614), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 197/327 (60%), Gaps = 6/327 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNG----LHREAIDVFREMRSEMLETDQYTFGS 82
+ D+R++F D + + +MI G ++ G LH EA+++FR+MR ++ TF S
Sbjct: 401 LTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELH-EALNIFRDMRFRLIRPSLLTFVS 459
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN 142
+L A + +L Q H + K G +I+AGSAL+D+Y C +K + VF EM K+
Sbjct: 460 LLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKD 519
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
+V W +M GY Q +EEA+ +F ++Q PD+FT +++++ GNLAS++ G +FH
Sbjct: 520 LVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHC 579
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
L GL ++NAL+ +Y KCGS ED H+ F +D V W +++S+Y+ G+ +
Sbjct: 580 QLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKK 639
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
+++ E M++ G++P+ +TF+GVLS CS LVE G + FE M + GI P +HY C++
Sbjct: 640 ALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMV 698
Query: 323 DLFSRAGRLEEARDFINQMLFRDSVLM 349
L RAGRL +AR+ I +M + + ++
Sbjct: 699 SLLGRAGRLNKARELIEKMPTKPAAIV 725
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 173/330 (52%), Gaps = 16/330 (4%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM-RSEMLETDQYTFGSMLTACG 88
+R++F M ER+ +SW++M+S C +G++ E++ VF E R+ ++Y S + AC
Sbjct: 98 ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS 157
Query: 89 GVMALQEGN------QAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN 142
G+ +G Q S+++K+GF ++Y G+ L+D Y K ++ A VF + K+
Sbjct: 158 GL----DGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKS 213
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
V+WT M+ G + G S ++++F + + VVPD + L +V+S+C L LE G Q H
Sbjct: 214 TVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHA 273
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
L GL ++ N L+ Y KCG + H+LF+ M K+ +SWT L+S Y Q E
Sbjct: 274 HILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKE 333
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY--SC 320
+ LF SM GLKPD +L+ C+ + G Q+ K + D Y +
Sbjct: 334 AMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKAN---LGNDSYVTNS 390
Query: 321 IIDLFSRAGRLEEARDFINQMLFRDSVLMQ 350
+ID++++ L +AR + D VL
Sbjct: 391 LIDMYAKCDCLTDARKVFDIFAAADVVLFN 420
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 183/336 (54%), Gaps = 7/336 (2%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
D YL G I+ +R +F + E+ +++WT+MISGC + G ++ +F ++ + +
Sbjct: 191 DFYLKDGN---IDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVP 247
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
D Y ++L+AC + L+ G Q H++I++ G + + + L+D Y KC V +A +F
Sbjct: 248 DGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLF 307
Query: 136 KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE 195
M KN++SWT +L GY QN +EA+++F M K+G+ PD + S+++SC +L +L
Sbjct: 308 NGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALG 367
Query: 196 EGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYS 255
G Q H + + L + V+N+L+ +Y KC + D ++F D V + A++ YS
Sbjct: 368 FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYS 427
Query: 256 QFG---KANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGII 312
+ G + +E + +F M ++P +TF+ +L + + QI M K +G+
Sbjct: 428 RLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK-YGLN 486
Query: 313 PIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVL 348
S +ID++S L+++R ++M +D V+
Sbjct: 487 LDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVI 522
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 4/252 (1%)
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
L N H II G + + Y + L+++Y + + A VF++M +N+VSW+ M+
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 153 YGQNGYSEEAVKIFCDM-QKYGVVPDDFTLGSVISSCGNLASLEEGA--QFHGIALVSGL 209
+G EE++ +F + + P+++ L S I +C L Q + SG
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGF 179
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFES 269
V V L+ Y K G+I+ +F + K V+WT ++S + G++ +++LF
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 270 MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAG 329
++ + PD VLS CS +E G QI + + +G+ + +ID + + G
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCG 298
Query: 330 RLEEARDFINQM 341
R+ A N M
Sbjct: 299 RVIAAHKLFNGM 310
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
ED+ + F RD + W S+IS +G ++A+ + +M SE +E + TF +L+AC
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC 666
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN-VVSW 146
+++G + +++ G + +V + + + A + ++M K + W
Sbjct: 667 SHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVW 726
Query: 147 TAMLVGYGQNGYSEEA 162
++L G + G E A
Sbjct: 727 RSLLSGCAKAGNVELA 742
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 187/320 (58%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+R LF M E D + + SM G ++ E +F E+ + + D YTF S+L AC
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
AL+EG Q H +K G DN+Y L++MY +C V SA VF + VV + AM
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
+ GY + EA+ +F +MQ + P++ TL SV+SSC L SL+ G H A
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFES 269
+V V+ AL+ ++ KCGS++D +F +M +KD +W+A++ AY+ GKA +++ +FE
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 270 MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAG 329
M + ++PD++TF+G+L+ CS T VE+G + F M + GI+P HY ++DL SRAG
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 330 RLEEARDFINQMLFRDSVLM 349
LE+A +FI+++ + ++
Sbjct: 382 NLEDAYEFIDKLPISPTPML 401
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 140/255 (54%), Gaps = 8/255 (3%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++ +R +F + E + + +MI+G + EA+ +FREM+ + L+ ++ T S+L++
Sbjct: 180 VDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSS 239
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + +L G H Y K F + +AL+DM+ KC S+ A ++F++M YK+ +W
Sbjct: 240 CALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAW 299
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
+AM+V Y +G +E+++ +F M+ V PD+ T ++++C + +EEG ++ +V
Sbjct: 300 SAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFS-QMV 358
Query: 207 S--GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKD-EVSWTALVSAYSQFGKAN-- 261
S G++ + ++V L + G++ED + ++ + W L++A S +
Sbjct: 359 SKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLA 418
Query: 262 ETI--RLFESMLTHG 274
E + R+FE +HG
Sbjct: 419 EKVSERIFELDDSHG 433
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 134/259 (51%), Gaps = 7/259 (2%)
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKS----AETVFKEMSYKNVVSWT 147
+L+E Q +Y IK+ +D + + +C +S A +F+ MS ++V +
Sbjct: 41 SLRELMQIQAYAIKSHIEDVSFVAKLI--NFCTESPTESSMSYARHLFEAMSEPDIVIFN 98
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
+M GY + E +F ++ + G++PD++T S++ +C +LEEG Q H +++
Sbjct: 99 SMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKL 158
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
GL V V L+++Y +C ++ +F + V + A+++ Y++ + NE + LF
Sbjct: 159 GLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF 218
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSR 327
M LKP+++T + VLS C+ ++ G I + K+H + +ID+F++
Sbjct: 219 REMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHK-YAKKHSFCKYVKVNTALIDMFAK 277
Query: 328 AGRLEEARDFINQMLFRDS 346
G L++A +M ++D+
Sbjct: 278 CGSLDDAVSIFEKMRYKDT 296
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/323 (38%), Positives = 187/323 (57%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E+S +LF + +D+ W SMISG + G REAI +F EM + D+ T ++LT
Sbjct: 501 LEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTV 560
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C +L G + H Y ++ G + GSALV+MY KC S+K A V+ + + VS
Sbjct: 561 CSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSC 620
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
++++ GY Q+G ++ +F DM G D F + S++ + GAQ H
Sbjct: 621 SSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITK 680
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
GL + +V ++L+++Y K GSI+DC + FS++ D ++WTAL+++Y+Q GKANE +++
Sbjct: 681 IGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQV 740
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
+ M G KPDKVTF+GVLS CS LVE+ SM K++GI P HY C++D
Sbjct: 741 YNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALG 800
Query: 327 RAGRLEEARDFINQMLFRDSVLM 349
R+GRL EA FIN M + L+
Sbjct: 801 RSGRLREAESFINNMHIKPDALV 823
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 174/329 (52%), Gaps = 6/329 (1%)
Query: 20 VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYT 79
V + L ED+ ++F D + W ++I+G +N + D+F EM + D YT
Sbjct: 194 VFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYT 253
Query: 80 FGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS 139
+ S+L AC + L+ G + +IK G +D ++ +A+VD+Y KC + A VF +
Sbjct: 254 YSSVLAACASLEKLRFGKVVQARVIKCGAED-VFVCTAIVDLYAKCGHMAEAMEVFSRIP 312
Query: 140 YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ 199
+VVSWT ML GY ++ + A++IF +M+ GV ++ T+ SVIS+CG + + E +Q
Sbjct: 313 NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQ 372
Query: 200 FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEM-TFKDEVSWTALVSAYSQFG 258
H SG +V+ AL+S+Y K G I+ ++F ++ + + +++++SQ
Sbjct: 373 VHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSK 432
Query: 259 KANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY 318
K + IRLF ML GL+ D+ + +LSV L G Q+ T + G++
Sbjct: 433 KPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL---GKQV-HGYTLKSGLVLDLTVG 488
Query: 319 SCIIDLFSRAGRLEEARDFINQMLFRDSV 347
S + L+S+ G LEE+ + F+D+
Sbjct: 489 SSLFTLYSKCGSLEESYKLFQGIPFKDNA 517
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 165/309 (53%), Gaps = 7/309 (2%)
Query: 27 IEDSRQLFCDMR--ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSML 84
I+ S Q+F D+ +R +I MI+ +Q+ +AI +F M E L TD+++ S+L
Sbjct: 402 IDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL 460
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV 144
+ + L G Q H Y +K+G ++ GS+L +Y KC S++ + +F+ + +K+
Sbjct: 461 SV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNA 517
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
W +M+ G+ + GY EA+ +F +M G PD+ TL +V++ C + SL G + HG
Sbjct: 518 CWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYT 577
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
L +G+ + + +ALV++Y KCGS++ +++ + D VS ++L+S YSQ G +
Sbjct: 578 LRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGF 637
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
LF M+ G D +L + + G Q+ +TK G+ S ++ +
Sbjct: 638 LLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITK-IGLCTEPSVGSSLLTM 696
Query: 325 FSRAGRLEE 333
+S+ G +++
Sbjct: 697 YSKFGSIDD 705
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 153/319 (47%), Gaps = 7/319 (2%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ D+ +LF + + D +S MISG Q+ L E++ F +M E ++ ++GS+++A
Sbjct: 100 MADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISA 159
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + A + IK G+ SAL+D++ K + A VF++ NV W
Sbjct: 160 CSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCW 219
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
++ G +N +F +M PD +T SV+++C +L L G +
Sbjct: 220 NTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIK 279
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
G V V A+V LY KCG + + +FS + VSWT ++S Y++ A + +
Sbjct: 280 CGAED-VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEI 338
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
F+ M G++ + T V+S C R +V + +Q+ + K G + +I ++S
Sbjct: 339 FKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKS-GFYLDSSVAAALISMYS 397
Query: 327 RAGRLEEARDFINQMLFRD 345
++G ++ +++ +F D
Sbjct: 398 KSGDID-----LSEQVFED 411
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 10/235 (4%)
Query: 111 NIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQ 170
+++ +L+ Y S+ A +F + +VVS M+ GY Q+ EE+++ F M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 171 KYGVVPDDFTLGSVISSCGNLAS--LEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGS 228
G ++ + GSVIS+C L + E H I + G + V +AL+ ++ K
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKM--GYFFYEVVESALIDVFSKNLR 200
Query: 229 IEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSV 288
ED +++F + + W +++ + LF M KPD T+ VL+
Sbjct: 201 FEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAA 260
Query: 289 CSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC--IIDLFSRAGRLEEARDFINQM 341
C+ + G + + K +D + C I+DL+++ G + EA + +++
Sbjct: 261 CASLEKLRFGKVVQARVIK----CGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRI 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 7/140 (5%)
Query: 209 LISF-VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
L+ F V ++ +L+S Y GS+ D +LF + D VS ++S Y Q E++R F
Sbjct: 79 LLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFF 138
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSR 327
M G + +++++ V+S CS + +++ T + G + S +ID+FS+
Sbjct: 139 SKMHFLGFEANEISYGSVISACSALQ-APLFSELVCCHTIKMGYFFYEVVESALIDVFSK 197
Query: 328 AGRLEEARDFINQMLFRDSV 347
R E+A +FRDS+
Sbjct: 198 NLRFEDAYK-----VFRDSL 212
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 192/300 (64%), Gaps = 5/300 (1%)
Query: 43 ISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSY 102
+SWT+MISG QN EA+D+F EM+ + + +++T+ +LTA + + ++ H+
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQ 418
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEA 162
++KT ++ + G+AL+D Y K V+ A VF + K++V+W+AML GY Q G +E A
Sbjct: 419 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAA 478
Query: 163 VKIFCDMQKYGVVPDDFTLGSVISSCGNL-ASLEEGAQFHGIALVSGLISFVTVSNALVS 221
+K+F ++ K G+ P++FT S+++ C AS+ +G QFHG A+ S L S + VS+AL++
Sbjct: 479 IKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLT 538
Query: 222 LYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVT 281
+Y K G+IE +F KD VSW +++S Y+Q G+A + + +F+ M +K D VT
Sbjct: 539 MYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVT 598
Query: 282 FIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
FIGV + C+ LVE+G + F+ M ++ I P ++H SC++DL+SRAG+LE+A I M
Sbjct: 599 FIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 170/322 (52%), Gaps = 5/322 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ +R LF + ++W SMISG NGL EA+ +F MR + + +F S++
Sbjct: 245 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKL 304
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS-YKNVVS 145
C + L+ Q H ++K GF + +AL+ Y KC ++ A +FKE+ NVVS
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVS 364
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
WTAM+ G+ QN EEAV +F +M++ GV P++FT ++++ ++ ++ H +
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVV 420
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
+ TV AL+ Y K G +E+ ++FS + KD V+W+A+++ Y+Q G+ I+
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
+F + G+KP++ TF +L+VC+ T + F + + S ++ ++
Sbjct: 481 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 540
Query: 326 SRAGRLEEARDFINQMLFRDSV 347
++ G +E A + + +D V
Sbjct: 541 AKKGNIESAEEVFKRQREKDLV 562
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 166/312 (53%), Gaps = 14/312 (4%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
+D R++F +M+ER+ ++WT++ISG +N ++ E + +F M++E + + +TF + L
Sbjct: 145 KDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAAL--- 201
Query: 88 GGVMALQ----EGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV 143
GV+A + G Q H+ ++K G I ++L+++Y KC +V+ A +F + K+V
Sbjct: 202 -GVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV 260
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGI 203
V+W +M+ GY NG EA+ +F M+ V + + SVI C NL L Q H
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCS 320
Query: 204 ALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT-FKDEVSWTALVSAYSQFGKANE 262
+ G + + AL+ Y KC ++ D RLF E+ + VSWTA++S + Q E
Sbjct: 321 VVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEE 380
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
+ LF M G++P++ T+ +L+ E Q+ ++ + + + ++
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVG-----TALL 435
Query: 323 DLFSRAGRLEEA 334
D + + G++EEA
Sbjct: 436 DAYVKLGKVEEA 447
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 154/299 (51%), Gaps = 1/299 (0%)
Query: 29 DSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACG 88
++ LF RD S+ S++ G +++G +EA +F + +E D F S+L
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
+ G Q H IK GF D++ G++LVD Y K + K VF EM +NVV+WT
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
++ GY +N ++E + +F MQ G P+ FT + + G Q H + + +G
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
L + VSN+L++LY KCG++ LF + K V+W +++S Y+ G E + +F
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSR 327
SM + ++ + +F V+ +C+ + + Q+ S+ K +G + Q+ + ++ +S+
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK-YGFLFDQNIRTALMVAYSK 342
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 129/226 (57%), Gaps = 5/226 (2%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
D+Y+ LG+ +E++ ++F + ++D ++W++M++G Q G AI +F E+ ++
Sbjct: 436 DAYVKLGK---VEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKP 492
Query: 76 DQYTFGSMLTACGGVMA-LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETV 134
+++TF S+L C A + +G Q H + IK+ ++ SAL+ MY K +++SAE V
Sbjct: 493 NEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEV 552
Query: 135 FKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASL 194
FK K++VSW +M+ GY Q+G + +A+ +F +M+K V D T V ++C + +
Sbjct: 553 FKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLV 612
Query: 195 EEGAQFHGIALVSGLISFVTVSNA-LVSLYGKCGSIEDCHRLFSEM 239
EEG ++ I + I+ N+ +V LY + G +E ++ M
Sbjct: 613 EEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 238 bits (608), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 189/323 (58%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ D+ ++F +M + D + W+ MI+ QNG EA+D+F MR + +++T S+L
Sbjct: 298 MSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNG 357
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C G Q H ++K GF +IY +AL+D+Y KC + +A +F E+S KN VSW
Sbjct: 358 CAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSW 417
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
++VGY G +A +F + + V + T S + +C +LAS++ G Q HG+A+
Sbjct: 418 NTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIK 477
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
+ V VSN+L+ +Y KCG I+ +F+EM D SW AL+S YS G + +R+
Sbjct: 478 TNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRI 537
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
+ M KP+ +TF+GVLS CS L+++G + FESM ++HGI P +HY+C++ L
Sbjct: 538 LDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLG 597
Query: 327 RAGRLEEARDFINQMLFRDSVLM 349
R+G+L++A I + + SV++
Sbjct: 598 RSGQLDKAMKLIEGIPYEPSVMI 620
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 165/326 (50%), Gaps = 4/326 (1%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
++Y V G ++ +R +F + +D + W ++S +NG +++ + MR
Sbjct: 189 NAYSVCGS---VDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMP 245
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
+ YTF + L A G+ A H I+KT + + G L+ +Y + + A VF
Sbjct: 246 NNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVF 305
Query: 136 KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE 195
EM +VV W+ M+ + QNG+ EAV +F M++ VVP++FTL S+++ C
Sbjct: 306 NEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG 365
Query: 196 EGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYS 255
G Q HG+ + G + VSNAL+ +Y KC ++ +LF+E++ K+EVSW ++ Y
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYE 425
Query: 256 QFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ 315
G+ + +F L + + +VTF L C+ ++ G Q+ K + +
Sbjct: 426 NLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVA 485
Query: 316 DHYSCIIDLFSRAGRLEEARDFINQM 341
S +ID++++ G ++ A+ N+M
Sbjct: 486 VSNS-LIDMYAKCGDIKFAQSVFNEM 510
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 162/320 (50%), Gaps = 5/320 (1%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
+D+ LF +M ER+++S+ ++ G ++ I ++ + E E + + F S L
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHREGHELNPHVFTSFLKLF 156
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
+ + HS I+K G+ N + G+AL++ Y C SV SA TVF+ + K++V W
Sbjct: 157 VSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWA 216
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
++ Y +NGY E+++K+ M+ G +P+++T + + + L + + HG L +
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
+ V L+ LY + G + D ++F+EM D V W+ +++ + Q G NE + LF
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSR 327
M + P++ T +L+ C+ + G Q+ + K + I + +ID++++
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVS-NALIDVYAK 395
Query: 328 AGRLEEARDFINQMLFRDSV 347
+++ A ++ ++ V
Sbjct: 396 CEKMDTAVKLFAELSSKNEV 415
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 4/207 (1%)
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
D + +G+ML C H I+K G +++A + L++ Y K K A +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 136 KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE 195
EM +N VS+ + GY ++ + ++ + + G + S + +L E
Sbjct: 108 DEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 196 EGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYS 255
H + G S V AL++ Y CGS++ +F + KD V W +VS Y
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 256 QFGKANETIRLFESMLTHGLKPDKVTF 282
+ G ++++L M G P+ TF
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTF 250
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 195/348 (56%), Gaps = 32/348 (9%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ +SR LF R I W SMISG N + EA+ +F EMR+E E D T +++ A
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE-DSRTLAAVINA 327
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRS------------------- 127
C G+ L+ G Q H + K G D+I S L+DMY KC S
Sbjct: 328 CIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILL 387
Query: 128 ------------VKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV 175
+ A+ VF+ + K+++SW +M G+ QNG + E ++ F M K +
Sbjct: 388 NSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLP 447
Query: 176 PDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRL 235
D+ +L SVIS+C +++SLE G Q A + GL S VS++L+ LY KCG +E R+
Sbjct: 448 TDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRV 507
Query: 236 FSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLV 295
F M DEV W +++S Y+ G+ E I LF+ M G++P ++TF+ VL+ C+ LV
Sbjct: 508 FDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLV 567
Query: 296 EKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLF 343
E+G ++FESM +HG +P ++H+SC++DL +RAG +EEA + + +M F
Sbjct: 568 EEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPF 615
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 168/380 (44%), Gaps = 67/380 (17%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+R+LF M E+D ++ S++ G NG EA+ +F+E+ D T ++L AC
Sbjct: 143 ARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN---FSADAITLTTVLKACAE 199
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSA------------------ 131
+ AL+ G Q H+ I+ G + + S+LV++Y KC ++ A
Sbjct: 200 LEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSAL 259
Query: 132 -------------ETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDD 178
+F S + V+ W +M+ GY N EA+ +F +M+ D
Sbjct: 260 ISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN-ETREDS 318
Query: 179 FTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGS---------- 228
TL +VI++C L LE G Q H A GLI + V++ L+ +Y KCGS
Sbjct: 319 RTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSE 378
Query: 229 ---------------------IEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
I+D R+F + K +SW ++ + +SQ G ET+ F
Sbjct: 379 VESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYF 438
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSR 327
M L D+V+ V+S C+ +E G Q+F T G+ Q S +IDL+ +
Sbjct: 439 HQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIV-GLDSDQVVSSSLIDLYCK 497
Query: 328 AGRLEEARDFINQMLFRDSV 347
G +E R + M+ D V
Sbjct: 498 CGFVEHGRRVFDTMVKSDEV 517
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 153/351 (43%), Gaps = 73/351 (20%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+R LF +M +R+ SW +MI G +G ++ F M E D Y++
Sbjct: 81 ARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFF----DMMPERDGYSWN-------- 128
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
++ +GF K + A +F M K+VV+ ++
Sbjct: 129 -------------VVVSGF--------------AKAGELSVARRLFNAMPEKDVVTLNSL 161
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
L GY NGY+EEA+++F ++ D TL +V+ +C L +L+ G Q H L+ G+
Sbjct: 162 LHGYILNGYAEEALRLF---KELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGV 218
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE- 268
++++LV++Y KCG + + ++ D+ S +AL+S Y+ G+ NE+ LF+
Sbjct: 219 ECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDR 278
Query: 269 ----------SMLT-------------------HGLKPDKVTFIGVLSVCSRTRLVEKGN 299
SM++ + + D T V++ C +E G
Sbjct: 279 KSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGK 338
Query: 300 QIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLMQ 350
Q+ K G+I S ++D++S+ G EA +++ D++L+
Sbjct: 339 QMHCHACK-FGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLN 388
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 235 bits (600), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 191/321 (59%), Gaps = 6/321 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++ +R++F R+R W ++ T G E + ++ +M +E+D++T+ +L A
Sbjct: 128 VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKA 187
Query: 87 CGG----VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN 142
C V L +G + H+++ + G+ ++Y + LVDMY + V A VF M +N
Sbjct: 188 CVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN 247
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQK--YGVVPDDFTLGSVISSCGNLASLEEGAQF 200
VVSW+AM+ Y +NG + EA++ F +M + P+ T+ SV+ +C +LA+LE+G
Sbjct: 248 VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 307
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKA 260
HG L GL S + V +ALV++YG+CG +E R+F M +D VSW +L+S+Y G
Sbjct: 308 HGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYG 367
Query: 261 NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC 320
+ I++FE ML +G P VTF+ VL CS LVE+G ++FE+M ++HGI P +HY+C
Sbjct: 368 KKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC 427
Query: 321 IIDLFSRAGRLEEARDFINQM 341
++DL RA RL+EA + M
Sbjct: 428 MVDLLGRANRLDEAAKMVQDM 448
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 145/311 (46%), Gaps = 11/311 (3%)
Query: 43 ISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSY 102
IS +I + G ++AI V + S Q T+ ++ CG +L + + H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEA 162
I+ G + + + L+ MY SV A VF + + + W A+ G+ EE
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 163 VKIFCDMQKYGVVPDDFTLGSVISSC----GNLASLEEGAQFHGIALVSGLISFVTVSNA 218
+ ++ M + GV D FT V+ +C + L +G + H G S V +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 219 LVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESML--THGLK 276
LV +Y + G ++ +F M ++ VSW+A+++ Y++ GKA E +R F M+ T
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 277 PDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARD 336
P+ VT + VL C+ +E+G I + + G+ I S ++ ++ R G+LE +
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRR-GLDSILPVISALVTMYGRCGKLEVGQR 341
Query: 337 FINQMLFRDSV 347
++M RD V
Sbjct: 342 VFDRMHDRDVV 352
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
GR +E +++F M +RD +SW S+IS +G ++AI +F EM + TF
Sbjct: 331 GRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFV 390
Query: 82 SMLTACGGVMALQEGNQAHSYIIKT-GFKDNIYAGSALVDMYCKCRSVKSAETVFKEM 138
S+L AC ++EG + + + G K I + +VD+ + + A + ++M
Sbjct: 391 SVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 448
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 235 bits (599), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/357 (34%), Positives = 200/357 (56%), Gaps = 33/357 (9%)
Query: 20 VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEM-LETDQY 78
V G+ + Q+F +M RD I+W S+++ Q L + + VF + S L D +
Sbjct: 47 VYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDF 106
Query: 79 TFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM 138
F +++ AC + ++ G Q H + I + + ++ S+LVDMY KC + SA+ VF +
Sbjct: 107 VFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSI 166
Query: 139 SYKNVVSWTAMLVGYGQNGYSEEAVK-------------------------------IFC 167
KN +SWTAM+ GY ++G EEA++ +F
Sbjct: 167 RVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFT 226
Query: 168 DMQKYGV-VPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKC 226
+M++ V + D L S++ +C NLA+ G Q HG+ + G S V +SNAL+ +Y KC
Sbjct: 227 EMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKC 286
Query: 227 GSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVL 286
+ +FS M +D VSWT+L+ +Q G+A + + L++ M++HG+KP++VTF+G++
Sbjct: 287 SDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLI 346
Query: 287 SVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLF 343
CS VEKG ++F+SMTK++GI P HY+C++DL R+G L+EA + I+ M F
Sbjct: 347 YACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPF 403
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 146/259 (56%), Gaps = 3/259 (1%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET-DQYTFGSMLTA 86
E++ +LF + ++ SWT++ISG Q+G EA VF EMR E ++ D S++ A
Sbjct: 188 EEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGA 247
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + A G Q H +I GF ++ +AL+DMY KC V +A+ +F M +++VVSW
Sbjct: 248 CANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSW 307
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIAL 205
T+++VG Q+G +E+A+ ++ DM +GV P++ T +I +C ++ +E+G + F +
Sbjct: 308 TSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTK 367
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFGKANETI 264
G+ + L+ L G+ G +++ L M F DE +W AL+SA + G+ I
Sbjct: 368 DYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGI 427
Query: 265 RLFESMLTHGLKPDKVTFI 283
R+ + +++ D T+I
Sbjct: 428 RIADHLVSSFKLKDPSTYI 446
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 129/303 (42%), Gaps = 46/303 (15%)
Query: 84 LTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV 143
L C L H++I+K G + LV++Y KC + A VF EM +++
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV-PDDFTLGSVISSCGNLASLEEGAQFHG 202
++W ++L Q S + + +F + + PDDF +++ +C NL S++ G Q H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
+VS + V ++LV +Y KCG + +F + K+ +SWTA+VS Y++ G+ E
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 263 TIRLFESMLTHGLKP--------------------------------DKVTFIGVLSVCS 290
+ LF + L D + ++ C+
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 291 RTRLVEKGNQIFESMTKEHGIIPIQDHYSCI------IDLFSRAGRLEEARDFINQMLFR 344
G Q+ HG++ SC+ ID++++ + A+D ++M R
Sbjct: 250 NLAASIAGRQV-------HGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHR 302
Query: 345 DSV 347
D V
Sbjct: 303 DVV 305
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 234 bits (598), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 188/320 (58%), Gaps = 1/320 (0%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
++++F M + ++ T ++ G TQ G R+A+ +F ++ +E +E D + F +L AC
Sbjct: 238 AKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACAS 297
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
+ L G Q H+ + K G + + G+ LVD Y KC S +SA F+E+ N VSW+A+
Sbjct: 298 LEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAI 357
Query: 150 LVGYGQNGYSEEAVKIFCDMQ-KYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
+ GY Q EEAVK F ++ K + + FT S+ +C LA G Q H A+
Sbjct: 358 ISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRS 417
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
LI +AL+++Y KCG ++D + +F M D V+WTA +S ++ +G A+E +RLFE
Sbjct: 418 LIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFE 477
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
M++ G+KP+ VTFI VL+ CS LVE+G ++M +++ + P DHY C+ID+++R+
Sbjct: 478 KMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARS 537
Query: 329 GRLEEARDFINQMLFRDSVL 348
G L+EA F+ M F +
Sbjct: 538 GLLDEALKFMKNMPFEPDAM 557
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 164/322 (50%), Gaps = 2/322 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ED+ +LF +M E +++S T+MIS + G+ +A+ +F M + + + ++L +
Sbjct: 134 LEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKS 193
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
AL G Q H+++I+ G N + +V+MY KC + A+ VF +M+ K V+
Sbjct: 194 LVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAC 253
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
T ++VGY Q G + +A+K+F D+ GV D F V+ +C +L L G Q H
Sbjct: 254 TGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAK 313
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
GL S V+V LV Y KC S E R F E+ ++VSW+A++S Y Q + E ++
Sbjct: 314 LGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKT 373
Query: 267 FESMLTHGLKP-DKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
F+S+ + + T+ + CS G Q+ K +I Q S +I ++
Sbjct: 374 FKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKR-SLIGSQYGESALITMY 432
Query: 326 SRAGRLEEARDFINQMLFRDSV 347
S+ G L++A + M D V
Sbjct: 433 SKCGCLDDANEVFESMDNPDIV 454
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 127/253 (50%), Gaps = 3/253 (1%)
Query: 58 HR---EAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYA 114
HR EA + +EM + Y++ + AC + +L G H + ++
Sbjct: 61 HRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLL 120
Query: 115 GSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGV 174
+ ++ MYC+CRS++ A+ +F EMS N VS T M+ Y + G ++AV +F M G
Sbjct: 121 QNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGD 180
Query: 175 VPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHR 234
P +++ S N +L+ G Q H + +GL S ++ +V++Y KCG + R
Sbjct: 181 KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKR 240
Query: 235 LFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRL 294
+F +M K V+ T L+ Y+Q G+A + ++LF ++T G++ D F VL C+
Sbjct: 241 VFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEE 300
Query: 295 VEKGNQIFESMTK 307
+ G QI + K
Sbjct: 301 LNLGKQIHACVAK 313
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++D+ ++F M D ++WT+ ISG G EA+ +F +M S ++ + TF ++LTA
Sbjct: 438 LDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTA 497
Query: 87 CGGVMALQEGNQA-HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK-NVV 144
C +++G + + K I ++D+Y + + A K M ++ + +
Sbjct: 498 CSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAM 557
Query: 145 SWTAMLVG 152
SW L G
Sbjct: 558 SWKCFLSG 565
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 187/322 (58%), Gaps = 2/322 (0%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
+D+R+LF ++ ER+ +W + IS +G REAI+ F E R + TF + L AC
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 219
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
+ L G Q H ++++GF ++ + L+D Y KC+ ++S+E +F EM KN VSW
Sbjct: 220 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 279
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
+++ Y QN E+A ++ +K V DF + SV+S+C +A LE G H A+ +
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
+ + V +ALV +YGKCG IED + F EM K+ V+ +L+ Y+ G+ + + LF
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 399
Query: 268 ESMLTH--GLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
E M G P+ +TF+ +LS CSR VE G +IF+SM +GI P +HYSCI+D+
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 459
Query: 326 SRAGRLEEARDFINQMLFRDSV 347
RAG +E A +FI +M + ++
Sbjct: 460 GRAGMVERAYEFIKKMPIQPTI 481
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 161/336 (47%), Gaps = 9/336 (2%)
Query: 17 SYLV--LGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLE 74
+YL+ +L E +R + R+ +SWTS+ISG QNG A+ F EMR E +
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV 105
Query: 75 TDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETV 134
+ +TF A + G Q H+ +K G +++ G + DMYCK R A +
Sbjct: 106 PNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKL 165
Query: 135 FKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASL 194
F E+ +N+ +W A + +G EA++ F + ++ P+ T + +++C + L
Sbjct: 166 FDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHL 225
Query: 195 EEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAY 254
G Q HG+ L SG + V+V N L+ YGKC I +F+EM K+ VSW +LV+AY
Sbjct: 226 NLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAY 285
Query: 255 SQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK---EHGI 311
Q + + L+ ++ VLS C+ +E G I K E I
Sbjct: 286 VQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTI 345
Query: 312 IPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
S ++D++ + G +E++ ++M ++ V
Sbjct: 346 FV----GSALVDMYGKCGCIEDSEQAFDEMPEKNLV 377
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 126/243 (51%), Gaps = 4/243 (1%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
G+ I S +F +M ++++SW S+++ QN +A ++ R +++ET +
Sbjct: 255 GKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMIS 314
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
S+L+AC G+ L+ G H++ +K + I+ GSALVDMY KC ++ +E F EM K
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKY--GVVPDDFTLGSVISSCGNLASLEEGAQ 199
N+V+ +++ GY G + A+ +F +M G P+ T S++S+C ++E G +
Sbjct: 375 NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMK 434
Query: 200 -FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSAYSQF 257
F + G+ + +V + G+ G +E + +M + +S W AL +A
Sbjct: 435 IFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMH 494
Query: 258 GKA 260
GK
Sbjct: 495 GKP 497
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 1/213 (0%)
Query: 79 TFGSMLTACGGVMALQEGNQAHSYIIKT-GFKDNIYAGSALVDMYCKCRSVKSAETVFKE 137
G +L +++ G H+ I+KT + + L++MY K +SA V +
Sbjct: 8 ALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRL 67
Query: 138 MSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG 197
+NVVSWT+++ G QNG+ A+ F +M++ GVVP+DFT + +L G
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127
Query: 198 AQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQF 257
Q H +A+ G I V V + +Y K +D +LF E+ ++ +W A +S
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIGVLSVCS 290
G+ E I F P+ +TF L+ CS
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 220
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 194/331 (58%), Gaps = 4/331 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ED+R++ +M E++ +SWT+MIS +Q G EA+ VF EM + +++TF ++LT+
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C L G Q H I+K + +I+ GS+L+DMY K +K A +F+ + ++VVS
Sbjct: 163 CIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSC 222
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
TA++ GY Q G EEA+++F + G+ P+ T S++++ LA L+ G Q H L
Sbjct: 223 TAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR 282
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
L + + N+L+ +Y KCG++ RLF M + +SW A++ YS+ G E + L
Sbjct: 283 RELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLEL 342
Query: 267 FESMLTHG-LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK-EHGIIPIQDHYSCIIDL 324
F M +KPD VT + VLS CS R+ + G IF+ M E+G P +HY CI+D+
Sbjct: 343 FRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDM 402
Query: 325 FSRAGRLEEARDFINQMLFRDS--VLMQLVG 353
RAGR++EA +FI +M + + VL L+G
Sbjct: 403 LGRAGRIDEAFEFIKRMPSKPTAGVLGSLLG 433
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 160/300 (53%), Gaps = 6/300 (2%)
Query: 49 ISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGF 108
IS NG +EA+ EM E + + ++L AC AL++G + H+++IKT +
Sbjct: 27 ISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY 83
Query: 109 KDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCD 168
Y + L+ Y KC ++ A V EM KNVVSWTAM+ Y Q G+S EA+ +F +
Sbjct: 84 LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 169 MQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGS 228
M + P++FT +V++SC + L G Q HG+ + S + V ++L+ +Y K G
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 203
Query: 229 IEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSV 288
I++ +F + +D VS TA+++ Y+Q G E + +F + + G+ P+ VT+ +L+
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 289 CSRTRLVEKGNQIF-ESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
S L++ G Q + +E + + +ID++S+ G L AR + M R ++
Sbjct: 264 LSGLALLDHGKQAHCHVLRRELPFYAVLQ--NSLIDMYSKCGNLSYARRLFDNMPERTAI 321
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 189/316 (59%), Gaps = 1/316 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++ ++ +F +M +R +S+TSMI+G + GL EA+ +F EM E + D YT ++L
Sbjct: 347 LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 406
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C L EG + H +I + +I+ +AL+DMY KC S++ AE VF EM K+++SW
Sbjct: 407 CARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISW 466
Query: 147 TAMLVGYGQNGYSEEAVKIF-CDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
++ GY +N Y+ EA+ +F +++ PD+ T+ V+ +C +L++ ++G + HG +
Sbjct: 467 NTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 526
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
+G S V+N+LV +Y KCG++ H LF ++ KD VSWT +++ Y G E I
Sbjct: 527 RNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIA 586
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
LF M G++ D+++F+ +L CS + LV++G + F M E I P +HY+CI+D+
Sbjct: 587 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDML 646
Query: 326 SRAGRLEEARDFINQM 341
+R G L +A FI M
Sbjct: 647 ARTGDLIKAYRFIENM 662
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 180/333 (54%), Gaps = 19/333 (5%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++ +R++F +M ERD ISW S+I+G NGL + + VF +M +E D T S+
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + G HS +K F + L+DMY KC + SA+ VF+EMS ++VVS+
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
T+M+ GY + G + EAVK+F +M++ G+ PD +T+ +V++ C L+EG + H
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
+ L + VSNAL+ +Y KCGS+++ +FSEM KD +SW ++ YS+ ANE + L
Sbjct: 426 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSL 485
Query: 267 FESMLTHG-LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYS------ 319
F +L PD+ T VL C+ +KG +I HG I ++S
Sbjct: 486 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI-------HGYIMRNGYFSDRHVAN 538
Query: 320 CIIDLFSRAGRLEEARDFINQMLFRDSVLMQLV 352
++D++++ G L + MLF D LV
Sbjct: 539 SLVDMYAKCGAL-----LLAHMLFDDIASKDLV 566
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 180/319 (56%), Gaps = 1/319 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++++ ++F +++ ++ W +++ ++G +I +F++M S +E D YTF + +
Sbjct: 145 LKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKS 204
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
+ ++ G Q H +I+K+GF + G++LV Y K + V SA VF EM+ ++V+SW
Sbjct: 205 FSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISW 264
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
+++ GY NG +E+ + +F M G+ D T+ SV + C + + G H I +
Sbjct: 265 NSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVK 324
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
+ N L+ +Y KCG ++ +F EM+ + VS+T++++ Y++ G A E ++L
Sbjct: 325 ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
FE M G+ PD T VL+ C+R RL+++G ++ E + KE+ + + ++D+++
Sbjct: 385 FEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI-KENDLGFDIFVSNALMDMYA 443
Query: 327 RAGRLEEARDFINQMLFRD 345
+ G ++EA ++M +D
Sbjct: 444 KCGSMQEAELVFSEMRVKD 462
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 135/275 (49%), Gaps = 3/275 (1%)
Query: 74 ETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAET 133
+ D T S+L C +L++G + ++I GF + GS L MY C +K A
Sbjct: 91 DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150
Query: 134 VFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLAS 193
VF E+ + + W ++ ++G ++ +F M GV D +T V S +L S
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 194 LEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSA 253
+ G Q HG L SG +V N+LV+ Y K ++ ++F EMT +D +SW ++++
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 254 YSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIP 313
Y G A + + +F ML G++ D T + V + C+ +RL+ G + K
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVK--ACFS 328
Query: 314 IQDHY-SCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+D + + ++D++S+ G L+ A+ +M R V
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVV 363
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 3/207 (1%)
Query: 141 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
++V L + ++G E AVK+ C K+ + P TL SV+ C + SL++G +
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEV 116
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKA 260
+G + + + L +Y CG +++ R+F E+ + + W L++ ++ G
Sbjct: 117 DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF 176
Query: 261 NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC 320
+ +I LF+ M++ G++ D TF V S R V G Q+ + K G +
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKS-GFGERNSVGNS 235
Query: 321 IIDLFSRAGRLEEARDFINQMLFRDSV 347
++ + + R++ AR ++M RD +
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVI 262
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 197/316 (62%), Gaps = 5/316 (1%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
++ D+ QLF M +R+ ISWT+MIS ++ +H++A+++ M + + + YT+ S+L
Sbjct: 111 LLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR 170
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
+C G + + H IIK G + +++ SAL+D++ K + A +VF EM + +
Sbjct: 171 SCNG---MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W +++ G+ QN S+ A+++F M++ G + + TL SV+ +C LA LE G Q H + +
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH-VHI 286
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
V + ++NALV +Y KCGS+ED R+F++M +D ++W+ ++S +Q G + E ++
Sbjct: 287 VKYDQDLI-LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALK 345
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
LFE M + G KP+ +T +GVL CS L+E G F SM K +GI P+++HY C+IDL
Sbjct: 346 LFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLL 405
Query: 326 SRAGRLEEARDFINQM 341
+AG+L++A +N+M
Sbjct: 406 GKAGKLDDAVKLLNEM 421
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 134/236 (56%), Gaps = 4/236 (1%)
Query: 20 VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYT 79
V +L ED+ +F +M D+I W S+I G QN A+++F+ M+ +Q T
Sbjct: 203 VFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQAT 262
Query: 80 FGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS 139
S+L AC G+ L+ G QAH +I+K + ++ +ALVDMYCKC S++ A VF +M
Sbjct: 263 LTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMK 320
Query: 140 YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG-A 198
++V++W+ M+ G QNGYS+EA+K+F M+ G P+ T+ V+ +C + LE+G
Sbjct: 321 ERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWY 380
Query: 199 QFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSA 253
F + + G+ ++ L GK G ++D +L +EM + D V+W L+ A
Sbjct: 381 YFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 145/296 (48%), Gaps = 7/296 (2%)
Query: 52 CTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDN 111
C Q L R A+ ++S L D T+ ++ C A+ EGN ++ G +
Sbjct: 37 CYQRDLPR-AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 112 IYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQK 171
++ + L++MY K + A +F +M +NV+SWT M+ Y + ++A+++ M +
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 172 YGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIED 231
V P+ +T SV+ SC ++ + H + GL S V V +AL+ ++ K G ED
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 232 CHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSR 291
+F EM D + W +++ ++Q +++ + LF+ M G ++ T VL C+
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 292 TRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
L+E G Q + K + + + ++D++ + G LE+A NQM RD +
Sbjct: 273 LALLELGMQAHVHIVKYDQDLILNN---ALVDMYCKCGSLEDALRVFNQMKERDVI 325
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 94/191 (49%), Gaps = 10/191 (5%)
Query: 161 EAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALV 220
A+K +Q +G+ D T +I C + ++ EG +G + + N L+
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 221 SLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKV 280
++Y K + D H+LF +M ++ +SWT ++SAYS+ + + L ML ++P+
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 281 TFIGVLSVC---SRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDF 337
T+ VL C S R++ G I E + + + S +ID+F++ G E+A
Sbjct: 164 TYSSVLRSCNGMSDVRMLHCG-IIKEGLESDVFV------RSALIDVFAKLGEPEDALSV 216
Query: 338 INQMLFRDSVL 348
++M+ D+++
Sbjct: 217 FDEMVTGDAIV 227
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 228 bits (580), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 186/324 (57%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
MI D+R+LF ++ ER+ S+ S+ISG G + EA ++F+ M E+ + + +TF ML
Sbjct: 173 MIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLR 232
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
A G+ ++ G Q H +K G DN + L+DMY KC ++ A F+ M K V+
Sbjct: 233 ASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVA 292
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W ++ GY +GYSEEA+ + DM+ GV D FTL +I LA LE Q H +
Sbjct: 293 WNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLI 352
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
+G S + + ALV Y K G ++ +F ++ K+ +SW AL+ Y+ G+ + ++
Sbjct: 353 RNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVK 412
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
LFE M+ + P+ VTF+ VLS C+ + L E+G +IF SM++ HGI P HY+C+I+L
Sbjct: 413 LFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELL 472
Query: 326 SRAGRLEEARDFINQMLFRDSVLM 349
R G L+EA FI + + +V M
Sbjct: 473 GRDGLLDEAIAFIRRAPLKTTVNM 496
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 157/329 (47%), Gaps = 6/329 (1%)
Query: 23 RLLMIEDSRQLFCDMR-ERDSISWTSMISGCTQNGLHREAIDVFR--EMRSEMLETDQYT 79
R+ + E Q+ D + + ++ S I REA ++F E+R + T
Sbjct: 67 RIEVKESKDQILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCS-FKVGVST 125
Query: 80 FGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS 139
+ +++ AC + +++ + + +++ GF+ Y + ++ M+ KC + A +F E+
Sbjct: 126 YDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIP 185
Query: 140 YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ 199
+N+ S+ +++ G+ G EA ++F M + + T ++ + L S+ G Q
Sbjct: 186 ERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQ 245
Query: 200 FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
H AL G++ VS L+ +Y KCG IED F M K V+W +++ Y+ G
Sbjct: 246 LHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGY 305
Query: 260 ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYS 319
+ E + L M G+ D+ T ++ + ++ +E Q S+ + +G +
Sbjct: 306 SEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIR-NGFESEIVANT 364
Query: 320 CIIDLFSRAGRLEEARDFINQMLFRDSVL 348
++D +S+ GR++ AR ++ L R +++
Sbjct: 365 ALVDFYSKWGRVDTAR-YVFDKLPRKNII 392
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/315 (37%), Positives = 191/315 (60%), Gaps = 8/315 (2%)
Query: 28 EDSRQLFCDMRERDS--ISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
E + ++F M +RDS +W S+ISG + G + +A+ ++ +M + ++ D++TF +L
Sbjct: 144 EVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLK 203
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
ACGG+ ++Q G H ++K GF ++Y +ALV MY KC + A VF + +K+ VS
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVS 263
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W +ML GY +G EA+ IF M + G+ PD + SV++ + S + G Q HG +
Sbjct: 264 WNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLA---RVLSFKHGRQLHGWVI 320
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
G+ ++V+NAL+ LY K G + +F +M +D VSW A++SA+S K + ++
Sbjct: 321 RRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHS---KNSNGLK 377
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
FE M KPD +TF+ VLS+C+ T +VE G ++F M+KE+GI P +HY+C+++L+
Sbjct: 378 YFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLY 437
Query: 326 SRAGRLEEARDFINQ 340
RAG +EEA I Q
Sbjct: 438 GRAGMMEEAYSMIVQ 452
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 141/280 (50%), Gaps = 16/280 (5%)
Query: 75 TDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETV 134
T+ F S+L C + A+ G + H I ++N+ S LV +Y C + A V
Sbjct: 90 TEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEV 149
Query: 135 FKEMSYKN--VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLA 192
F MS ++ +W +++ GY + G E+A+ ++ M + GV PD FT V+ +CG +
Sbjct: 150 FDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIG 209
Query: 193 SLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVS 252
S++ G H + G V V NALV +Y KCG I +F + KD VSW ++++
Sbjct: 210 SVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLT 269
Query: 253 AYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQ-----IFESMTK 307
Y G +E + +F M+ +G++PDKV + SV +R + G Q I M
Sbjct: 270 GYLHHGLLHEALDIFRLMVQNGIEPDKV---AISSVLARVLSFKHGRQLHGWVIRRGMEW 326
Query: 308 EHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
E + + +I L+S+ G+L +A +QML RD+V
Sbjct: 327 ELSVA------NALIVLYSKRGQLGQACFIFDQMLERDTV 360
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 145/304 (47%), Gaps = 29/304 (9%)
Query: 15 WDSYLVLGRLLM------IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM 68
+D Y++ ++M I +R +F + +D +SW SM++G +GL EA+D+FR M
Sbjct: 228 YDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLM 287
Query: 69 RSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSV 128
+E D+ S+L V++ + G Q H ++I+ G + + +AL+ +Y K +
Sbjct: 288 VQNGIEPDKVAISSVLAR---VLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQL 344
Query: 129 KSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSC 188
A +F +M ++ VSW A++ + +N +K F M + PD T SV+S C
Sbjct: 345 GQACFIFDQMLERDTVSWNAIISAHSKNS---NGLKYFEQMHRANAKPDGITFVSVLSLC 401
Query: 189 GNLASLEEGAQ-FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLF-SEMTFK-DEV 245
N +E+G + F ++ G+ + +V+LYG+ G +E+ + + EM +
Sbjct: 402 ANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPT 461
Query: 246 SWTALVSAYSQFGKAN----ETIRLFESMLTHGLKPDKVT----FIGVLSVCSRTRLVEK 297
W AL+ A G + RLFE L+PD I + S R VE+
Sbjct: 462 VWGALLYACYLHGNTDIGEVAAQRLFE------LEPDNEHNFELLIRIYSKAKRAEDVER 515
Query: 298 GNQI 301
Q+
Sbjct: 516 VRQM 519
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/329 (35%), Positives = 188/329 (57%), Gaps = 1/329 (0%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
R + +R++F + D+ SW +I+G NG EA+ VF +MRS D +
Sbjct: 316 ARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM-SY 140
S+L A MAL +G Q HSYIIK GF ++ ++L+ MY C + +F++ +
Sbjct: 376 SLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNN 435
Query: 141 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
+ VSW +L Q+ E +++F M PD T+G+++ C ++SL+ G+Q
Sbjct: 436 ADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQV 495
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKA 260
H +L +GL + N L+ +Y KCGS+ R+F M +D VSW+ L+ Y+Q G
Sbjct: 496 HCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFG 555
Query: 261 NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC 320
E + LF+ M + G++P+ VTF+GVL+ CS LVE+G +++ +M EHGI P ++H SC
Sbjct: 556 EEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSC 615
Query: 321 IIDLFSRAGRLEEARDFINQMLFRDSVLM 349
++DL +RAGRL EA FI++M V++
Sbjct: 616 VVDLLARAGRLNEAERFIDEMKLEPDVVV 644
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 175/327 (53%), Gaps = 3/327 (0%)
Query: 23 RLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRS-EMLETDQYTFG 81
R + D+ ++F + +D ISW+S+I+G +Q G EA+ +EM S + ++Y FG
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
S L AC ++ G+Q H IK+ N AG +L DMY +C + SA VF ++
Sbjct: 275 SSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP 334
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
+ SW ++ G NGY++EAV +F M+ G +PD +L S++ + +L +G Q H
Sbjct: 335 DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIH 394
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEM-TFKDEVSWTALVSAYSQFGKA 260
+ G ++ +TV N+L+++Y C + C LF + D VSW +++A Q +
Sbjct: 395 SYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQP 454
Query: 261 NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC 320
E +RLF+ ML +PD +T +L C ++ G+Q+ + + G+ P Q +
Sbjct: 455 VEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQV-HCYSLKTGLAPEQFIKNG 513
Query: 321 IIDLFSRAGRLEEARDFINQMLFRDSV 347
+ID++++ G L +AR + M RD V
Sbjct: 514 LIDMYAKCGSLGQARRIFDSMDNRDVV 540
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 163/301 (54%), Gaps = 7/301 (2%)
Query: 14 KWDSYL------VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFRE 67
K+D+ L + G+ + D+R++F M ER+ +S+TS+I+G +QNG EAI ++ +
Sbjct: 99 KYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLK 158
Query: 68 MRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRS 127
M E L DQ+ FGS++ AC + G Q H+ +IK ++ A +AL+ MY +
Sbjct: 159 MLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQ 218
Query: 128 VKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV-PDDFTLGSVIS 186
+ A VF + K+++SW++++ G+ Q G+ EA+ +M +GV P+++ GS +
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 187 SCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS 246
+C +L + G+Q HG+ + S L +L +Y +CG + R+F ++ D S
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 247 WTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMT 306
W +++ + G A+E + +F M + G PD ++ +L ++ + +G QI +
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 307 K 307
K
Sbjct: 399 K 399
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 157/307 (51%), Gaps = 15/307 (4%)
Query: 49 ISGCTQNGLHREAIDVFR-EMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTG 107
I+ ++ +REA++ F ++ + T+ S++ AC +L +G + H +I+ +
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 108 FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFC 167
K + + ++ MY KC S++ A VF M +N+VS+T+++ GY QNG EA++++
Sbjct: 98 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYL 157
Query: 168 DMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCG 227
M + +VPD F GS+I +C + + + G Q H + S + NAL+++Y +
Sbjct: 158 KMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFN 217
Query: 228 SIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGL-KPDKVTFIGVL 286
+ D R+F + KD +SW+++++ +SQ G E + + ML+ G+ P++ F L
Sbjct: 218 QMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSL 277
Query: 287 SVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII------DLFSRAGRLEEARDFINQ 340
CS + G+QI HG+ + I D+++R G L AR +Q
Sbjct: 278 KACSSLLRPDYGSQI-------HGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQ 330
Query: 341 MLFRDSV 347
+ D+
Sbjct: 331 IERPDTA 337
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 180/309 (58%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D ++W +M++G TQ+ + + +F M + +D +T ++ CG + A+ +G Q H
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSE 160
+Y IK+G+ +++ S ++DMY KC + +A+ F + + V+WT M+ G +NG E
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 161 EAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALV 220
A +F M+ GV+PD+FT+ ++ + L +LE+G Q H AL + V +LV
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLV 660
Query: 221 SLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKV 280
+Y KCGSI+D + LF + + +W A++ +Q G+ ET++LF+ M + G+KPDKV
Sbjct: 661 DMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV 720
Query: 281 TFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQ 340
TFIGVLS CS + LV + + SM ++GI P +HYSC+ D RAG +++A + I
Sbjct: 721 TFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIES 780
Query: 341 MLFRDSVLM 349
M S M
Sbjct: 781 MSMEASASM 789
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 166/308 (53%), Gaps = 7/308 (2%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+R +F +M ERD ISW S+I+G QNGL EA+ +F ++ L+ DQYT S+L A
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS 428
Query: 90 VM-ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
+ L Q H + IK + + +AL+D Y + R +K AE +F+ ++ ++V+W A
Sbjct: 429 LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNA 487
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
M+ GY Q+ + +K+F M K G DDFTL +V +CG L ++ +G Q H A+ SG
Sbjct: 488 MMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG 547
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
+ VS+ ++ +Y KCG + F + D+V+WT ++S + G+ +F
Sbjct: 548 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFS 607
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY--SCIIDLFS 326
M G+ PD+ T + S +E+G QI + K + D + + ++D+++
Sbjct: 608 QMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK---LNCTNDPFVGTSLVDMYA 664
Query: 327 RAGRLEEA 334
+ G +++A
Sbjct: 665 KCGSIDDA 672
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 7/297 (2%)
Query: 54 QNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIY 113
+G + + F +M +E DQ TF ML V +L G Q H +K G +
Sbjct: 292 HSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLT 351
Query: 114 AGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYG 173
++L++MYCK R A TVF MS ++++SW +++ G QNG EAV +F + + G
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 174 VVPDDFTLGSVISSCGNLA---SLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIE 230
+ PD +T+ SV+ + +L SL + H I + + SF VS AL+ Y + ++
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF--VSTALIDAYSRNRCMK 469
Query: 231 DCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCS 290
+ LF F D V+W A+++ Y+Q ++T++LF M G + D T V C
Sbjct: 470 EAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528
Query: 291 RTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ +G Q+ K + + S I+D++ + G + A+ + + D V
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVS-SGILDMYVKCGDMSAAQFAFDSIPVPDDV 584
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 144/321 (44%), Gaps = 38/321 (11%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGL-----HREAIDVFREMRSEMLETDQYTFGSML 84
+R++F M +RD +SW S+++ Q+ ++A +FR +R +++ T + T ML
Sbjct: 93 ARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPML 152
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV 144
C + H Y K G + + ALV++Y K VK + +F+EM Y++VV
Sbjct: 153 KLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVV 212
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
W ML Y + G+ EEA+ + G+ P++ TL + A+ G
Sbjct: 213 LWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL-------------ARISGDD 259
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
+G + N S+ SE+ F+++ +S Y G+ + +
Sbjct: 260 SDAGQVKSFANGNDASSV--------------SEIIFRNKG-----LSEYLHSGQYSALL 300
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
+ F M+ ++ D+VTFI +L+ + + G Q+ M + G+ + + +I++
Sbjct: 301 KCFADMVESDVECDQVTFILMLATAVKVDSLALGQQV-HCMALKLGLDLMLTVSNSLINM 359
Query: 325 FSRAGRLEEARDFINQMLFRD 345
+ + + AR + M RD
Sbjct: 360 YCKLRKFGFARTVFDNMSERD 380
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 5/195 (2%)
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
L G H+ I+ + + L+ MY KC S+ A VF +M +++VSW ++L
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 153 YGQNGYS-----EEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
Y Q+ ++A +F +++ V TL ++ C + + FHG A
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
GL V+ ALV++Y K G +++ LF EM ++D V W ++ AY + G E I L
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 268 ESMLTHGLKPDKVTF 282
+ + GL P+++T
Sbjct: 235 SAFHSSGLNPNEITL 249
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 135/326 (41%), Gaps = 53/326 (16%)
Query: 18 YLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQ 77
YL G+ +++ + LF +M RD + W M+ + G EAID+ S L ++
Sbjct: 190 YLKFGK---VKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNE 246
Query: 78 YTFGSML------TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSA 131
T + + G V + GN A S +
Sbjct: 247 ITLRLLARISGDDSDAGQVKSFANGNDASSV----------------------------S 278
Query: 132 ETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNL 191
E +F+ L Y +G +K F DM + V D T ++++ +
Sbjct: 279 EIIFRNKG----------LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKV 328
Query: 192 ASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALV 251
SL G Q H +AL GL +TVSN+L+++Y K +F M+ +D +SW +++
Sbjct: 329 DSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVI 388
Query: 252 SAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSR-TRLVEKGNQIFESMTKEHG 310
+ +Q G E + LF +L GLKPD+ T VL S + Q+ K
Sbjct: 389 AGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIK--- 445
Query: 311 IIPIQDHY--SCIIDLFSRAGRLEEA 334
I + D + + +ID +SR ++EA
Sbjct: 446 INNVSDSFVSTALIDAYSRNRCMKEA 471
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I+D+ LF + + +W +M+ G Q+G +E + +F++M+S ++ D+ TF +L+A
Sbjct: 669 IDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728
Query: 87 CGGVMALQEG-NQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS 139
C + E S G K I S L D + VK AE + + MS
Sbjct: 729 CSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMS 782
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 199/338 (58%), Gaps = 11/338 (3%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLE- 74
D Y GR I ++ ++F + +R ISW +MI+G G +A+D F M+ ++
Sbjct: 150 DMYSKCGR---INEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE 206
Query: 75 -TDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGF--KDNIYAGSALVDMYCKCRSVKSA 131
D++T S+L AC + G Q H +++++GF + +LVD+Y KC + SA
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 132 ETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNL 191
F ++ K ++SW+++++GY Q G EA+ +F +Q+ D F L S+I +
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADF 326
Query: 192 ASLEEGAQFHGIA--LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTA 249
A L +G Q +A L SGL + +V N++V +Y KCG +++ + F+EM KD +SWT
Sbjct: 327 ALLRQGKQMQALAVKLPSGLET--SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTV 384
Query: 250 LVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEH 309
+++ Y + G +++R+F ML H ++PD+V ++ VLS CS + ++++G ++F + + H
Sbjct: 385 VITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETH 444
Query: 310 GIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
GI P +HY+C++DL RAGRL+EA+ I+ M + +V
Sbjct: 445 GIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNV 482
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 178/323 (55%), Gaps = 11/323 (3%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
++F M ER+ +SW++++SG NG + ++ +F EM + + +++TF + L ACG +
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLV 151
AL++G Q H + +K GF+ + G++LVDMY KC + AE VF+ + ++++SW AM+
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181
Query: 152 GYGQNGYSEEAVKIFCDMQKYGVV--PDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
G+ GY +A+ F MQ+ + PD+FTL S++ +C + + G Q HG + SG
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 210 --ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
S T++ +LV LY KCG + + F ++ K +SW++L+ Y+Q G+ E + LF
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF 301
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC---IIDL 324
+ + + D ++ V + L+ +G Q+ K +P S ++D+
Sbjct: 302 KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVK----LPSGLETSVLNSVVDM 357
Query: 325 FSRAGRLEEARDFINQMLFRDSV 347
+ + G ++EA +M +D +
Sbjct: 358 YLKCGLVDEAEKCFAEMQLKDVI 380
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 146/281 (51%), Gaps = 19/281 (6%)
Query: 72 MLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSA 131
M+ + S+L C +G Q H Y++K+G N+ + L+DMYCKCR A
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 132 ETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNL 191
VF M +NVVSW+A++ G+ NG + ++ +F +M + G+ P++FT + + +CG L
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 192 ASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALV 251
+LE+G Q HG L G V V N+LV +Y KCG I + ++F + + +SW A++
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 252 SAYSQFGKANETIRLFESMLTHGLK--PDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEH 309
+ + G ++ + F M +K PD+ T +L CS T ++ G QI H
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQI-------H 233
Query: 310 GIIPIQDHYSC---------IIDLFSRAGRLEEARDFINQM 341
G + ++ + C ++DL+ + G L AR +Q+
Sbjct: 234 GFL-VRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQI 273
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 181/316 (57%), Gaps = 2/316 (0%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSE--MLETDQYTFGSMLT 85
D+ +F M E+D ++W S+ISG +NG +EA+ VF +M+ + L+ D S+
Sbjct: 425 PDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTN 484
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
AC G+ AL+ G Q H +IKTG N++ GS+L+D+Y KC + A VF MS +N+V+
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA 544
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W +M+ Y +N E ++ +F M G+ PD ++ SV+ + + ASL +G HG L
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL 604
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
G+ S + NAL+ +Y KCG + +F +M K ++W ++ Y G +
Sbjct: 605 RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALS 664
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
LF+ M G PD VTF+ ++S C+ + VE+G IFE M +++GI P +HY+ ++DL
Sbjct: 665 LFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLL 724
Query: 326 SRAGRLEEARDFINQM 341
RAG LEEA FI M
Sbjct: 725 GRAGLLEEAYSFIKAM 740
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 172/331 (51%), Gaps = 7/331 (2%)
Query: 26 MIEDSRQLF-CDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSML 84
M+ ++ +F C + +R I W +M++ +N A+D+F MR + + D +T +++
Sbjct: 322 MVGEAETVFSCVVDKRLEI-WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVI 380
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV 144
+ C + G H+ + K + SAL+ +Y KC A VFK M K++V
Sbjct: 381 SCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMV 440
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQ--KYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
+W +++ G +NG +EA+K+F DM+ + PD + SV ++C L +L G Q HG
Sbjct: 441 AWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHG 500
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
+ +GL+ V V ++L+ LY KCG E ++F+ M+ ++ V+W +++S YS+
Sbjct: 501 SMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPEL 560
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY-SCI 321
+I LF ML+ G+ PD V+ VL S T + KG + T G IP H + +
Sbjct: 561 SIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL-HGYTLRLG-IPSDTHLKNAL 618
Query: 322 IDLFSRAGRLEEARDFINQMLFRDSVLMQLV 352
ID++ + G + A + +M + + L+
Sbjct: 619 IDMYVKCGFSKYAENIFKKMQHKSLITWNLM 649
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 156/316 (49%), Gaps = 4/316 (1%)
Query: 29 DSRQLFCDMRERDSIS-WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
D+ ++F ++ ++ ++ W MI G +G+ ++D++ ++ ++ +F L AC
Sbjct: 223 DAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGAC 282
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
G Q H ++K G ++ Y ++L+ MY KC V AETVF + K + W
Sbjct: 283 SQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWN 342
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
AM+ Y +N Y A+ +F M++ V+PD FTL +VIS C L G H
Sbjct: 343 AMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR 402
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
+ S T+ +AL++LY KCG D + +F M KD V+W +L+S + GK E +++F
Sbjct: 403 PIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVF 462
Query: 268 ESML--THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
M LKPD V + C+ + G Q+ SM K G++ S +IDL+
Sbjct: 463 GDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLY 521
Query: 326 SRAGRLEEARDFINQM 341
S+ G E A M
Sbjct: 522 SKCGLPEMALKVFTSM 537
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 149/289 (51%), Gaps = 6/289 (2%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
+ E + ++F M + ++W SMIS ++N L +ID+F M S+ + D + S+L
Sbjct: 526 LPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLV 585
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
A +L +G H Y ++ G + + +AL+DMY KC K AE +FK+M +K++++
Sbjct: 586 AISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLIT 645
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIA 204
W M+ GYG +G A+ +F +M+K G PDD T S+IS+C + +EEG F +
Sbjct: 646 WNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMK 705
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSAYSQFGKANET 263
G+ + +V L G+ G +E+ + M + + S W L+SA
Sbjct: 706 QDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELG 765
Query: 264 IRLFESMLTHGLKPDK-VTFIGVLSVCSRTRLVEKGNQIFESMTKEHGI 311
I E +L ++P++ T++ ++++ L + ++ + KE G+
Sbjct: 766 ILSAEKLLR--MEPERGSTYVQLINLYMEAGLKNEAAKLL-GLMKEKGL 811
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 140/314 (44%), Gaps = 10/314 (3%)
Query: 40 RDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA-CG-GVMALQEGN 97
RD W SMI G + +E + FR M + D ++ +++ C G +EG
Sbjct: 131 RDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGK 190
Query: 98 QAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK-NVVSWTAMLVGYGQN 156
Q H ++++ + + +AL+DMY K A VF E+ K NVV W M+VG+G +
Sbjct: 191 QIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGS 250
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
G E ++ ++ + V + + +C + G Q H + GL + V
Sbjct: 251 GICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVC 310
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLK 276
+L+S+Y KCG + + +FS + K W A+V+AY++ + LF M +
Sbjct: 311 TSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL 370
Query: 277 PDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY---SCIIDLFSRAGRLEE 333
PD T V+S CS L G + + K PIQ S ++ L+S+ G +
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKR----PIQSTSTIESALLTLYSKCGCDPD 426
Query: 334 ARDFINQMLFRDSV 347
A M +D V
Sbjct: 427 AYLVFKSMEEKDMV 440
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 142/306 (46%), Gaps = 18/306 (5%)
Query: 44 SWTSMISGCTQNGLHREAIDVF-REMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSY 102
S S I Q G + +A+ ++ + S T +TF S+L AC + L G H
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF-------KEMSYKNVVSWTAMLVGYGQ 155
++ G++ + + ++LV+MY KC + A VF +S ++V W +M+ GY +
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 156 NGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSC---GNLASLEEGAQFHGIALVSGLISF 212
+E V F M +GV PD F+L V+S GN EEG Q HG L + L +
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRR-EEGKQIHGFMLRNSLDTD 204
Query: 213 VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSAYSQFGKANETIRLFESML 271
+ AL+ +Y K G D R+F E+ K V W ++ + G ++ L+
Sbjct: 205 SFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAK 264
Query: 272 THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC--IIDLFSRAG 329
+ +K +F G L CS++ G QI + K G+ D Y C ++ ++S+ G
Sbjct: 265 NNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK-MGL--HNDPYVCTSLLSMYSKCG 321
Query: 330 RLEEAR 335
+ EA
Sbjct: 322 MVGEAE 327
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/325 (37%), Positives = 190/325 (58%), Gaps = 6/325 (1%)
Query: 26 MIEDSRQLFCDMRE-RDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSML 84
++ ++ +F M E RD +SW SMI Q+ +A+ +++EM + + D +T S+L
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKC---RSVKSAETVFKEMSYK 141
A + L G Q H +IK GF N + GS L+D Y KC + +E VF+E+
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP 307
Query: 142 NVVSWTAMLVGYGQNG-YSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
++V W M+ GY N SEEAVK F MQ+ G PDD + V S+C NL+S + Q
Sbjct: 308 DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQI 367
Query: 201 HGIALVSGLIS-FVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
HG+A+ S + S ++V+NAL+SLY K G+++D +F M + VS+ ++ Y+Q G
Sbjct: 368 HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGH 427
Query: 260 ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYS 319
E + L++ ML G+ P+K+TF+ VLS C+ V++G + F +M + I P +HYS
Sbjct: 428 GTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYS 487
Query: 320 CIIDLFSRAGRLEEARDFINQMLFR 344
C+IDL RAG+LEEA FI+ M ++
Sbjct: 488 CMIDLLGRAGKLEEAERFIDAMPYK 512
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 160/322 (49%), Gaps = 11/322 (3%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I +RQLF ++ + D++S+ ++ISG A+ +F+ MR E D +T ++ A
Sbjct: 90 IHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAA 149
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS-YKNVVS 145
C + L + Q H + + GF +A V Y K ++ A +VF M ++ VS
Sbjct: 150 CCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVS 207
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W +M+V YGQ+ +A+ ++ +M G D FTL SV+++ +L L G QFHG +
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 206 VSGLISFVTVSNALVSLYGKCGSIE---DCHRLFSEMTFKDEVSWTALVSAYSQFGK-AN 261
+G V + L+ Y KCG + D ++F E+ D V W ++S YS + +
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 262 ETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ--DHYS 319
E ++ F M G +PD +F+ V S CS + QI K H IP +
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH--IPSNRISVNN 385
Query: 320 CIIDLFSRAGRLEEARDFINQM 341
+I L+ ++G L++AR ++M
Sbjct: 386 ALISLYYKSGNLQDARWVFDRM 407
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 117/229 (51%), Gaps = 4/229 (1%)
Query: 29 DSRQLFCDMRERDSISWTSMISGCTQN-GLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
DS ++F ++ D + W +MISG + N L EA+ FR+M+ D +F + +AC
Sbjct: 296 DSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSAC 355
Query: 88 GGVMALQEGNQAHSYIIKTGFKDN-IYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
+ + + Q H IK+ N I +AL+ +Y K +++ A VF M N VS+
Sbjct: 356 SNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSF 415
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIAL 205
M+ GY Q+G+ EA+ ++ M G+ P+ T +V+S+C + ++EG + F+ +
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKD-EVSWTALVSA 253
+ + ++ L G+ G +E+ R M +K V+W AL+ A
Sbjct: 476 TFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 4/222 (1%)
Query: 109 KDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCD 168
+ N+++ + +V Y K + A +F E+ + VS+ ++ GY + A+ +F
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 169 MQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGS 228
M+K G D FTL +I++C + L + Q H ++ G S+ +V+NA V+ Y K G
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 229 IEDCHRLFSEM-TFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLS 287
+ + +F M +DEVSW +++ AY Q + + + L++ M+ G K D T VL+
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 288 VCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAG 329
+ + G Q + K G S +ID +S+ G
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKA-GFHQNSHVGSGLIDFYSKCG 289
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/317 (37%), Positives = 187/317 (58%), Gaps = 8/317 (2%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I+++RQLF + +D +WT+M+SG QN + EA RE+ +M E ++ ++ +ML
Sbjct: 266 IDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEA----RELFDKMPERNEVSWNAMLA- 320
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
G V E + + N+ + ++ Y +C + A+ +F +M ++ VSW
Sbjct: 321 -GYVQG--ERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSW 377
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
AM+ GY Q+G+S EA+++F M++ G + + S +S+C ++ +LE G Q HG +
Sbjct: 378 AAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 437
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
G + V NAL+ +Y KCGSIE+ + LF EM KD VSW +++ YS+ G +R
Sbjct: 438 GGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRF 497
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
FESM GLKPD T + VLS CS T LV+KG Q F +MT+++G++P HY+C++DL
Sbjct: 498 FESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLG 557
Query: 327 RAGRLEEARDFINQMLF 343
RAG LE+A + + M F
Sbjct: 558 RAGLLEDAHNLMKNMPF 574
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 140/234 (59%), Gaps = 2/234 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I +++ LF M +RD +SW +MI+G +Q+G EA+ +F +M E ++ +F S L+
Sbjct: 359 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALST 418
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C V+AL+ G Q H ++K G++ + G+AL+ MYCKC S++ A +FKEM+ K++VSW
Sbjct: 419 CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSW 478
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIAL 205
M+ GY ++G+ E A++ F M++ G+ PDD T+ +V+S+C + +++G Q F+ +
Sbjct: 479 NTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ 538
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFG 258
G++ +V L G+ G +ED H L M F+ D W L+ A G
Sbjct: 539 DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 163/342 (47%), Gaps = 36/342 (10%)
Query: 12 IRKWD----SYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFRE 67
I++W+ SY+ GR ++ ++F M S+S+ MISG +NG ++ R+
Sbjct: 64 IKEWNVAISSYMRTGR---CNEALRVFKRMPRWSSVSYNGMISGYLRNG----EFELARK 116
Query: 68 MRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRS 127
+ EM E D ++ M+ G V G + I + ++ + + ++ Y +
Sbjct: 117 LFDEMPERDLVSWNVMIK--GYVRNRNLGKARELFEIMP--ERDVCSWNTMLSGYAQNGC 172
Query: 128 VKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISS 187
V A +VF M KN VSW A+L Y QN EEA +F + + +V + LG +
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 188 CGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSW 247
+ E QF V ++S+ N +++ Y + G I++ +LF E +D +W
Sbjct: 233 ----KKIVEARQFFDSMNVRDVVSW----NTIITGYAQSGKIDEARQLFDESPVQDVFTW 284
Query: 248 TALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK 307
TA+VS Y Q E LF+ M ++V++ +L+ + +E ++F+
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFD---- 336
Query: 308 EHGIIPIQD--HYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
++P ++ ++ +I +++ G++ EA++ ++M RD V
Sbjct: 337 ---VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 117/245 (47%), Gaps = 22/245 (8%)
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEA 162
++K G D I + + Y + A VFK M + VS+ M+ GY +NG E A
Sbjct: 56 LLKCGDSD-IKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELA 114
Query: 163 VKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSL 222
K+F +M + +V + + + + +L + + I + S+ N ++S
Sbjct: 115 RKLFDEMPERDLVSWNVMIKGYVRN----RNLGKARELFEIMPERDVCSW----NTMLSG 166
Query: 223 YGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTF 282
Y + G ++D +F M K++VSW AL+SAY Q K E LF+S L V++
Sbjct: 167 YAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSW 222
Query: 283 IGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQD--HYSCIIDLFSRAGRLEEARDFINQ 340
+L + + + + Q F+SM ++D ++ II ++++G+++EAR ++
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMN-------VRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 341 MLFRD 345
+D
Sbjct: 276 SPVQD 280
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 179/321 (55%)
Query: 29 DSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACG 88
++R LF +M E D +S+ +IS +Q + ++ FREM+ + + F +ML+
Sbjct: 303 ETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAA 362
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
+ +LQ G Q H + ++ G++LVDMY KC + AE +FK + + VSWTA
Sbjct: 363 NLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTA 422
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
++ GY Q G +K+F M+ + D T +V+ + + ASL G Q H + SG
Sbjct: 423 LISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG 482
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
+ V + LV +Y KCGSI+D ++F EM ++ VSW AL+SA++ G I F
Sbjct: 483 NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFA 542
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
M+ GL+PD V+ +GVL+ CS VE+G + F++M+ +GI P + HY+C++DL R
Sbjct: 543 KMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRN 602
Query: 329 GRLEEARDFINQMLFRDSVLM 349
GR EA +++M F +M
Sbjct: 603 GRFAEAEKLMDEMPFEPDEIM 623
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 158/288 (54%), Gaps = 3/288 (1%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
M E++ +F + +R ++SWT++ISG Q GLH + +F +MR L DQ TF ++L
Sbjct: 401 MFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLK 460
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
A +L G Q H++II++G +N+++GS LVDMY KC S+K A VF+EM +N VS
Sbjct: 461 ASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS 520
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIA 204
W A++ + NG E A+ F M + G+ PD ++ V+++C + +E+G + F ++
Sbjct: 521 WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMS 580
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFGKANET 263
+ G+ ++ L G+ G + +L EM F+ DE+ W+++++A +
Sbjct: 581 PIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLA 640
Query: 264 IRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGI 311
R E + + D ++ + ++ + EK + ++M +E GI
Sbjct: 641 ERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAM-RERGI 687
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 163/315 (51%), Gaps = 1/315 (0%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMA 92
LF ++ E+DS+++ ++I+G ++GL+ E+I +F +MR + +TF +L A G+
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
G Q H+ + TGF + G+ ++D Y K V +F EM + VS+ ++
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISF 212
Y Q E ++ F +MQ G +F +++S NL+SL+ G Q H AL++ S
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385
Query: 213 VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLT 272
+ V N+LV +Y KC E+ +F + + VSWTAL+S Y Q G ++LF M
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 273 HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLE 332
L+ D+ TF VL + + G Q+ + + + + S ++D++++ G ++
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG-SGLVDMYAKCGSIK 504
Query: 333 EARDFINQMLFRDSV 347
+A +M R++V
Sbjct: 505 DAVQVFEEMPDRNAV 519
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 153/327 (46%), Gaps = 9/327 (2%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM--RSEMLETDQYTFGSML 84
+ +R LF M +R ++WT ++ +N EA +FR+M S D TF ++L
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIY--AGSALVDMYCKCRSVKSAETVFKEMSYKN 142
C + Q H++ +K GF N + + L+ YC+ R + A +F+E+ K+
Sbjct: 155 PGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKD 214
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
V++ ++ GY ++G E++ +F M++ G P DFT V+ + L G Q H
Sbjct: 215 SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA 274
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
+++ +G +V N ++ Y K + + LF EM D VS+ ++S+YSQ +
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA 334
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIF--ESMTKEHGIIPIQDHYSC 320
++ F M G F +LS+ + ++ G Q+ + I+ + +
Sbjct: 335 SLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGN---S 391
Query: 321 IIDLFSRAGRLEEARDFINQMLFRDSV 347
++D++++ EEA + R +V
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLPQRTTV 418
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 5/246 (2%)
Query: 111 NIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQ 170
N + + ++ + K V SA +F M + VV+WT ++ Y +N + +EA K+F M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 171 KYG--VVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLIS--FVTVSNALVSLYGKC 226
+ +PD T +++ C + Q H A+ G + F+TVSN L+ Y +
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 227 GSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVL 286
++ LF E+ KD V++ L++ Y + G E+I LF M G +P TF GVL
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 287 SVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDS 346
G Q+ +++ G + I+D +S+ R+ E R ++M D
Sbjct: 258 KAVVGLHDFALGQQL-HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDF 316
Query: 347 VLMQLV 352
V +V
Sbjct: 317 VSYNVV 322
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 196/354 (55%), Gaps = 23/354 (6%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
G+ + ++ ++F +MR RD++SW ++I+ QNG E + +F M +E D++TFG
Sbjct: 428 GKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFG 487
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETV------- 134
S+L AC G +L G + HS I+K+G N G +L+DMY KC ++ AE +
Sbjct: 488 SILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR 546
Query: 135 ---------FKEMSYKNV----VSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTL 181
++M K + VSW +++ GY SE+A +F M + G+ PD FT
Sbjct: 547 ANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTY 606
Query: 182 GSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF 241
+V+ +C NLAS G Q H + L S V + + LV +Y KCG + D +F +
Sbjct: 607 ATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLR 666
Query: 242 KDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQI 301
+D V+W A++ Y+ GK E I+LFE M+ +KP+ VTFI +L C+ L++KG +
Sbjct: 667 RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEY 726
Query: 302 FESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFR--DSVLMQLVG 353
F M +++G+ P HYS ++D+ ++G+++ A + I +M F D + L+G
Sbjct: 727 FYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 780
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 180/319 (56%), Gaps = 2/319 (0%)
Query: 29 DSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACG 88
+S ++F + E++S+SW+++I+GC QN L A+ F+EM+ Q + S+L +C
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
+ L+ G Q H++ +K+ F + +A +DMY KC +++ A+ +F N S+ A
Sbjct: 293 ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNA 352
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
M+ GY Q + +A+ +F + G+ D+ +L V +C + L EG Q +G+A+ S
Sbjct: 353 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
L V V+NA + +YGKC ++ + R+F EM +D VSW A+++A+ Q GK ET+ LF
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 472
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
SML ++PD+ TF +L C+ L G +I S+ K G+ +ID++S+
Sbjct: 473 SMLRSRIEPDEFTFGSILKACTGGSL-GYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKC 530
Query: 329 GRLEEARDFINQMLFRDSV 347
G +EEA ++ R +V
Sbjct: 531 GMIEEAEKIHSRFFQRANV 549
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 160/322 (49%), Gaps = 9/322 (2%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+ F M RD +SW SM+SG QNG ++I+VF +M E +E D TF +L C
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSF 192
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
+ G Q H +++ G ++ A SAL+DMY K + + VF+ + KN VSW+A+
Sbjct: 193 LEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAI 252
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
+ G QN A+K F +MQK SV+ SC L+ L G Q H AL S
Sbjct: 253 IAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 312
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFES 269
+ V A + +Y KC +++D LF + S+ A+++ YSQ + + LF
Sbjct: 313 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR 372
Query: 270 MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCI----IDLF 325
+++ GL D+++ GV C+ + + +G QI+ K + + C+ ID++
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV-----CVANAAIDMY 427
Query: 326 SRAGRLEEARDFINQMLFRDSV 347
+ L EA ++M RD+V
Sbjct: 428 GKCQALAEAFRVFDEMRRRDAV 449
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 168/343 (48%), Gaps = 26/343 (7%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++D++ LF + + S+ +MI+G +Q +A+ +F + S L D+ + + A
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 391
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C V L EG Q + IK+ ++ +A +DMY KC+++ A VF EM ++ VSW
Sbjct: 392 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSW 451
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
A++ + QNG E + +F M + + PD+FT GS++ +C SL G + H +
Sbjct: 452 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVK 510
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDE--------------------VS 246
SG+ S +V +L+ +Y KCG IE+ ++ S + VS
Sbjct: 511 SGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVS 570
Query: 247 WTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMT 306
W +++S Y ++ + LF M+ G+ PDK T+ VL C+ G QI +
Sbjct: 571 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI 630
Query: 307 KEHGIIPIQDHYSC--IIDLFSRAGRLEEARDFINQMLFRDSV 347
K+ D Y C ++D++S+ G L ++R + L RD V
Sbjct: 631 KKE---LQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFV 670
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 133/303 (43%), Gaps = 45/303 (14%)
Query: 79 TFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM 138
F + C AL+ G QAH+++I +GF+ + + L+ +Y R SA VF +M
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 139 SYKNVVSWT-------------------------------AMLVGYGQNGYSEEAVKIFC 167
++VVSW +ML GY QNG S +++++F
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 168 DMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCG 227
DM + G+ D T ++ C L G Q HGI + G + V ++AL+ +Y K
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 228 SIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLS 287
+ R+F + K+ VSW+A+++ Q + ++ F+ M + + VL
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 288 VCSRTRLVEKGNQIFESMTKE----HGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLF 343
C+ + G Q+ K GI+ + +D++++ +++A Q+LF
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVR-----TATLDMYAKCDNMQDA-----QILF 339
Query: 344 RDS 346
+S
Sbjct: 340 DNS 342
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 224 bits (571), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 193/341 (56%), Gaps = 4/341 (1%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
D Y+ G+ +++ + + E+D + T++I G +Q G EA+ F+ M E ++
Sbjct: 209 DMYVKFGK---TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQP 265
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
++YT+ S+L +CG + + G H ++K+GF+ + + ++L+ MY +C V + VF
Sbjct: 266 NEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVF 325
Query: 136 KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE 195
K + Y N VSWT+++ G QNG E A+ F M + + P+ FTL S + C NLA E
Sbjct: 326 KCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFE 385
Query: 196 EGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYS 255
EG Q HGI G + L+ LYGKCG + +F ++ D +S ++ +Y+
Sbjct: 386 EGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYA 445
Query: 256 QFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ 315
Q G E + LFE M+ GL+P+ VT + VL C+ +RLVE+G ++F+S K+ I+
Sbjct: 446 QNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDK-IMLTN 504
Query: 316 DHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLMQLVGQPC 356
DHY+C++DL RAGRLEEA +++ D VL + + C
Sbjct: 505 DHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSAC 545
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 171/316 (54%), Gaps = 14/316 (4%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I+ +RQ+F M ER ++W S+I+ ++ +EA++++R M + + D+YT S+ A
Sbjct: 115 IDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKA 174
Query: 87 CGGVMALQEGNQAHSYIIKTGFK-DNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
+ +E ++H + G + N++ GSALVDMY K + A+ V + K+VV
Sbjct: 175 FSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVL 234
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
TA++VGY Q G EAVK F M V P+++T SV+ SCGNL + G HG+ +
Sbjct: 235 ITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMV 294
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
SG S + +L+++Y +C ++D R+F + + ++VSWT+L+S Q G+ +
Sbjct: 295 KSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALI 354
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPI----QDHY--S 319
F M+ +KP+ T L CS + E+G QI HGI+ +D Y S
Sbjct: 355 EFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI-------HGIVTKYGFDRDKYAGS 407
Query: 320 CIIDLFSRAGRLEEAR 335
+IDL+ + G + AR
Sbjct: 408 GLIDLYGKCGCSDMAR 423
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 127/234 (54%), Gaps = 2/234 (0%)
Query: 75 TDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETV 134
T + F +L C ++ ++++K+GF I +GS LVD KC + A V
Sbjct: 63 TTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYARQV 121
Query: 135 FKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASL 194
F MS +++V+W +++ ++ S+EAV+++ M V+PD++TL SV + +L+
Sbjct: 122 FDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLE 181
Query: 195 EEGAQFHGIALVSGL-ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSA 253
+E + HG+A++ GL +S V V +ALV +Y K G + + + KD V TAL+
Sbjct: 182 KEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVG 241
Query: 254 YSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK 307
YSQ G+ E ++ F+SML ++P++ T+ VL C + + G I M K
Sbjct: 242 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVK 295
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
L SG + ++ S LV KCG I+ ++F M+ + V+W +L++ + ++ E +
Sbjct: 92 LKSGFPAEISGSK-LVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAV 150
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGI-----IPIQDHY- 318
++ M+T+ + PD+ T V S L EK Q + HG+ + + + +
Sbjct: 151 EMYRLMITNNVLPDEYTLSSVFKAFSDLSL-EKEAQ------RSHGLAVILGLEVSNVFV 203
Query: 319 -SCIIDLFSRAGRLEEARDFINQMLFRDSVLM 349
S ++D++ + G+ EA+ ++++ +D VL+
Sbjct: 204 GSALVDMYVKFGKTREAKLVLDRVEEKDVVLI 235
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 177/321 (55%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E +RQLF M ER+ +SW SMI QN +EA+ +F++M E ++ + L A
Sbjct: 287 LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHA 346
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + L+ G H ++ G N+ ++L+ MYCKC+ V +A ++F ++ + +VSW
Sbjct: 347 CADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSW 406
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
AM++G+ QNG +A+ F M+ V PD FT SVI++ L+ HG+ +
Sbjct: 407 NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
S L V V+ ALV +Y KCG+I +F M+ + +W A++ Y G + L
Sbjct: 467 SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALEL 526
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
FE M +KP+ VTF+ V+S CS + LVE G + F M + + I DHY ++DL
Sbjct: 527 FEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLG 586
Query: 327 RAGRLEEARDFINQMLFRDSV 347
RAGRL EA DFI QM + +V
Sbjct: 587 RAGRLNEAWDFIMQMPVKPAV 607
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 174/325 (53%), Gaps = 21/325 (6%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ ++R++F M ERD +SW ++++G +QNG+ R A+++ + M E L+ T S+L A
Sbjct: 186 VNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA 245
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
+ + G + H Y +++GF + +ALVDMY KC S+++A +F M +NVVSW
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSW 305
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
+M+ Y QN +EA+ IF M GV P D ++ + +C +L LE G H +++
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
GL V+V N+L+S+Y KC ++ +F ++ + VSW A++ ++Q G+ + +
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC------ 320
F M + +KPD T++ V++ + + I HG++ SC
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI-------HGVV----MRSCLDKNVF 474
Query: 321 ----IIDLFSRAGRLEEARDFINQM 341
++D++++ G + AR + M
Sbjct: 475 VTTALVDMYAKCGAIMIARLIFDMM 499
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 152/277 (54%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++++ ++F + + ++ + +M+ G + +A+ F MR + +E Y F +L
Sbjct: 85 VDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKV 144
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
CG L+ G + H ++K+GF +++A + L +MY KCR V A VF M +++VSW
Sbjct: 145 CGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSW 204
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
++ GY QNG + A+++ M + + P T+ SV+ + L + G + HG A+
Sbjct: 205 NTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMR 264
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
SG S V +S ALV +Y KCGS+E +LF M ++ VSW +++ AY Q E + +
Sbjct: 265 SGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLI 324
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFE 303
F+ ML G+KP V+ +G L C+ +E+G I +
Sbjct: 325 FQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHK 361
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 1/256 (0%)
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLV 151
+L+E Q + K G + + LV ++C+ SV A VF+ + K V + ML
Sbjct: 49 SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLK 108
Query: 152 GYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLIS 211
G+ + ++A++ F M+ V P + ++ CG+ A L G + HG+ + SG
Sbjct: 109 GFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL 168
Query: 212 FVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESML 271
+ L ++Y KC + + ++F M +D VSW +V+ YSQ G A + + +SM
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 272 THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRL 331
LKP +T + VL S RL+ G +I G + + + ++D++++ G L
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEI-HGYAMRSGFDSLVNISTALVDMYAKCGSL 287
Query: 332 EEARDFINQMLFRDSV 347
E AR + ML R+ V
Sbjct: 288 ETARQLFDGMLERNVV 303
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 185/342 (54%), Gaps = 32/342 (9%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
E + +F +M +R + +W MISG G + +F+EM + D YTF S++ AC
Sbjct: 155 EAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNAC 214
Query: 88 GGVMA-LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRS------------------- 127
+ + G H+ ++K G+ + A ++++ Y K S
Sbjct: 215 SADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSW 274
Query: 128 -------VKSAET-----VFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV 175
+K ET VF KN+V+WT M+ GYG+NG E+A++ F +M K GV
Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVD 334
Query: 176 PDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRL 235
D F G+V+ +C LA L G HG + G + V NALV+LY KCG I++ R
Sbjct: 335 SDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRA 394
Query: 236 FSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLV 295
F ++ KD VSW ++ A+ G A++ ++L+++M+ G+KPD VTFIG+L+ CS + LV
Sbjct: 395 FGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLV 454
Query: 296 EKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDF 337
E+G IFESM K++ I DH +C+ID+F R G L EA+D
Sbjct: 455 EEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDL 496
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 179/392 (45%), Gaps = 78/392 (19%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I +RQ+F M E D+++W +M++ ++ GLH+EAI +F ++R + D Y+F ++L+
Sbjct: 20 IASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILST 79
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM--SYKNVV 144
C + ++ G + S +I++GF ++ ++L+DMY KC SA VF++M +N V
Sbjct: 80 CASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEV 139
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQK-----YGVV------------------------ 175
+W ++L Y E A+ +F +M K + ++
Sbjct: 140 TWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESE 199
Query: 176 --PDDFTLGSVISSC-GNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDC 232
PD +T S++++C + +++ G H + L +G S V N+++S Y K GS +D
Sbjct: 200 FKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDA 259
Query: 233 HR-------------------------------LFSEMTFKDEVSWTALVSAYSQFGKAN 261
R +F K+ V+WT +++ Y + G
Sbjct: 260 MRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGE 319
Query: 262 ETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGII---PIQDHY 318
+ +R F M+ G+ D + VL CS L+ G I HG + Q +
Sbjct: 320 QALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMI-------HGCLIHCGFQGYA 372
Query: 319 ---SCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ +++L+++ G ++EA + +D V
Sbjct: 373 YVGNALVNLYAKCGDIKEADRAFGDIANKDLV 404
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 207/343 (60%), Gaps = 17/343 (4%)
Query: 10 ICIRK-WDSYLVLGRLLM--------IEDSRQLFCDMRERDSISWTSMISGCTQNGLHRE 60
+CI++ ++S L +G +LM +E + +F M ER+ +SWT+MIS +
Sbjct: 301 LCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----D 355
Query: 61 AIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVD 120
A+ +F MR + + ++ TF ++ A ++EG + H IKTGF G++ +
Sbjct: 356 AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFIT 415
Query: 121 MYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFT 180
+Y K +++ A+ F++++++ ++SW AM+ G+ QNG+S EA+K+F +P+++T
Sbjct: 416 LYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAE-TMPNEYT 474
Query: 181 LGSVISSCG--NLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSE 238
GSV+++ S+++G + H L GL S VS+AL+ +Y K G+I++ ++F+E
Sbjct: 475 FGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNE 534
Query: 239 MTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKG 298
M+ K++ WT+++SAYS G + LF M+ + PD VTF+ VL+ C+R +V+KG
Sbjct: 535 MSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKG 594
Query: 299 NQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+IF M + + + P +HYSC++D+ RAGRL+EA + ++++
Sbjct: 595 YEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 637
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 183/315 (58%), Gaps = 10/315 (3%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNG-LHREAIDVFREMRSEMLETDQYTFGSMLTACG 88
+R++F +M +D ISW S++SG +Q G EA+ +FR+M E +E D +F S++T C
Sbjct: 228 ARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCC 287
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
L+ Q H IK G++ + G+ L+ Y KC +++ ++VF +MS +NVVSWT
Sbjct: 288 HETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTT 347
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
M+ + ++AV IF +M+ GV P++ T +I++ ++EG + HG+ + +G
Sbjct: 348 MI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTG 402
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
+S +V N+ ++LY K ++ED + F ++TF++ +SW A++S ++Q G ++E +++F
Sbjct: 403 FVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFL 462
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTR--LVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
S + P++ TF VL+ + V++G + + K G+ S ++D+++
Sbjct: 463 SAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK-LGLNSCPVVSSALLDMYA 520
Query: 327 RAGRLEEARDFINQM 341
+ G ++E+ N+M
Sbjct: 521 KRGNIDESEKVFNEM 535
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 172/314 (54%), Gaps = 10/314 (3%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMA 92
+F ++ + D +SW +++SG N + A++ M+S + D +T+ + L+ C G
Sbjct: 133 IFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEG 189
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
G Q S ++KTG + ++ G++ + MY + S + A VF EMS+K+++SW ++L G
Sbjct: 190 FLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSG 249
Query: 153 YGQNG-YSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLIS 211
Q G + EAV IF DM + GV D + SVI++C + L+ Q HG+ + G S
Sbjct: 250 LSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES 309
Query: 212 FVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESML 271
+ V N L+S Y KCG +E +F +M+ ++ VSWT ++S+ ++ + +F +M
Sbjct: 310 LLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMR 364
Query: 272 THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRL 331
G+ P++VTF+G+++ +++G +I + + G + + I L+++ L
Sbjct: 365 FDGVYPNEVTFVGLINAVKCNEQIKEGLKI-HGLCIKTGFVSEPSVGNSFITLYAKFEAL 423
Query: 332 EEARDFINQMLFRD 345
E+A+ + FR+
Sbjct: 424 EDAKKAFEDITFRE 437
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 7/273 (2%)
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
D+ T L AC G L+ G Q H + +GF + +A++ MY K +A +F
Sbjct: 77 DEVTLCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 134
Query: 136 KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE 195
+ + +VVSW +L G+ N + A+ M+ GVV D FT + +S C
Sbjct: 135 ENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL 191
Query: 196 EGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYS 255
G Q + +GL S + V N+ +++Y + GS R+F EM+FKD +SW +L+S S
Sbjct: 192 LGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLS 251
Query: 256 QFGKAN-ETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPI 314
Q G E + +F M+ G++ D V+F V++ C ++ QI + + G +
Sbjct: 252 QEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQI-HGLCIKRGYESL 310
Query: 315 QDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ + ++ +S+ G LE + +QM R+ V
Sbjct: 311 LEVGNILMSRYSKCGVLEAVKSVFHQMSERNVV 343
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 8/177 (4%)
Query: 172 YGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIED 231
+G D+ TL + +C L+ G Q HG + SG SFV VSNA++ +Y K G ++
Sbjct: 72 FGRHMDEVTLCLALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDN 129
Query: 232 CHRLFSEMTFKDEVSWTALVSAYSQFGKA-NETIRLFESMLTHGLKPDKVTFIGVLSVCS 290
+F + D VSW ++S + A N +R M + G+ D T+ LS C
Sbjct: 130 ALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVR----MKSAGVVFDAFTYSTALSFCV 185
Query: 291 RTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ G Q+ ++ K G+ + I ++SR+G AR ++M F+D +
Sbjct: 186 GSEGFLLGLQLQSTVVKT-GLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMI 241
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 113/311 (36%), Positives = 185/311 (59%), Gaps = 1/311 (0%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
+LF ++D ++WT+MI G +NG EA+ F EM+ + ++ T S+L A G V
Sbjct: 159 RLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVE 218
Query: 92 ALQEGNQAHSYIIKTG-FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAML 150
++ G H ++TG K +++ GS+LVDMY KC A+ VF EM +NVV+WTA++
Sbjct: 219 DVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALI 278
Query: 151 VGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLI 210
GY Q+ ++ + +F +M K V P++ TL SV+S+C ++ +L G + H + + +
Sbjct: 279 AGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIE 338
Query: 211 SFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESM 270
T L+ LY KCG +E+ +F + K+ +WTA+++ ++ G A + LF +M
Sbjct: 339 INTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTM 398
Query: 271 LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGR 330
L+ + P++VTF+ VLS C+ LVE+G ++F SM + P DHY+C++DLF R G
Sbjct: 399 LSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGL 458
Query: 331 LEEARDFINQM 341
LEEA+ I +M
Sbjct: 459 LEEAKALIERM 469
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 164/312 (52%), Gaps = 13/312 (4%)
Query: 30 SRQLFCDMRERDSISWTSMIS----GCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
+R+L C ++ W S+I G T N R + +R MR + ++TF +L
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLN--RRLSFLAYRHMRRNGVIPSRHTFPPLLK 112
Query: 86 ACGGVMALQEGN--QAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV 143
A V L++ N Q H++I+K G + + ++L+ Y A +F K+V
Sbjct: 113 A---VFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDV 169
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGI 203
V+WTAM+ G+ +NG + EA+ F +M+K GV ++ T+ SV+ + G + + G HG+
Sbjct: 170 VTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGL 229
Query: 204 ALVSGLISF-VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
L +G + V + ++LV +YGKC +D ++F EM ++ V+WTAL++ Y Q ++
Sbjct: 230 YLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDK 289
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
+ +FE ML + P++ T VLS C+ + +G ++ M K I + +I
Sbjct: 290 GMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAG-TTLI 348
Query: 323 DLFSRAGRLEEA 334
DL+ + G LEEA
Sbjct: 349 DLYVKCGCLEEA 360
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 126/227 (55%), Gaps = 6/227 (2%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
+D++++F +M R+ ++WT++I+G Q+ + + VF EM + ++ T S+L+AC
Sbjct: 257 DDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSAC 316
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
V AL G + H Y+IK + N AG+ L+D+Y KC ++ A VF+ + KNV +WT
Sbjct: 317 AHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWT 376
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
AM+ G+ +GY+ +A +F M V P++ T +V+S+C + +EEG + +
Sbjct: 377 AMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRL--FLSMK 434
Query: 208 GLISFVTVSN---ALVSLYGKCGSIEDCHRLFSEMTFKD-EVSWTAL 250
G + ++ +V L+G+ G +E+ L M + V W AL
Sbjct: 435 GRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGAL 481
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 221 bits (563), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 193/322 (59%), Gaps = 7/322 (2%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEM--LETDQYT 79
G+ +I ++R++F + +RD + W +++S NG+ EA + + M S+ D +T
Sbjct: 188 GKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFT 247
Query: 80 FGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS 139
F S+L+AC +++G Q H+ + K ++ +I +AL++MY K + A F+ M
Sbjct: 248 FSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMV 303
Query: 140 YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ 199
+NVVSW AM+VG+ QNG EA+++F M + PD+ T SV+SSC +++ E Q
Sbjct: 304 VRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQ 363
Query: 200 FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
+ G F++V+N+L+S Y + G++ + F + D VSWT+++ A + G
Sbjct: 364 VQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGF 423
Query: 260 ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYS 319
A E++++FESML L+PDK+TF+ VLS CS LV++G + F+ MT+ + I +HY+
Sbjct: 424 AEESLQMFESML-QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYT 482
Query: 320 CIIDLFSRAGRLEEARDFINQM 341
C+IDL RAG ++EA D +N M
Sbjct: 483 CLIDLLGRAGFIDEASDVLNSM 504
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 154/314 (49%), Gaps = 12/314 (3%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQ---NGLHREAIDV--FREMRSEMLETDQYTFGS 82
+D+ +LF +M R+ ++W +I G Q + HR + + + D +F
Sbjct: 88 DDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMG 147
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN 142
++ C ++ G Q H ++K G + + + ++LV Y KC + A VF+ + ++
Sbjct: 148 LIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRD 207
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDM--QKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
+V W A++ Y NG +EA + M K D FT S++S+C +E+G Q
Sbjct: 208 LVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQI 263
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKA 260
H I + V+ AL+++Y K + D F M ++ VSW A++ ++Q G+
Sbjct: 264 HAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEG 323
Query: 261 NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC 320
E +RLF ML L+PD++TF VLS C++ + + Q+ ++M + G +
Sbjct: 324 REAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQV-QAMVTKKGSADFLSVANS 382
Query: 321 IIDLFSRAGRLEEA 334
+I +SR G L EA
Sbjct: 383 LISSYSRNGNLSEA 396
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 132/264 (50%), Gaps = 16/264 (6%)
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
L + Q H +++K G ++++ + L+ Y K R A+ +F EM +N+V+W ++ G
Sbjct: 52 LSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHG 111
Query: 153 YGQ-NGYSEEAVKI-FCDMQKY---GVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
Q +G + + FC + + V D + +I C + +++ G Q H + +
Sbjct: 112 VIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQ 171
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
GL S S +LV YGKCG I + R+F + +D V W ALVS+Y G +E L
Sbjct: 172 GLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLL 231
Query: 268 ESMLT--HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK--EHGIIPIQDHYSCIID 323
+ M + + + D TF +LS C +E+G QI + K IP+ + +++
Sbjct: 232 KLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVA---TALLN 284
Query: 324 LFSRAGRLEEARDFINQMLFRDSV 347
+++++ L +AR+ M+ R+ V
Sbjct: 285 MYAKSNHLSDARECFESMVVRNVV 308
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 189 GNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWT 248
+L L + Q HG + G+ + + + N L+ Y K +D +LF EM ++ V+W
Sbjct: 47 ASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWN 106
Query: 249 ALVSAYSQF-GKANETIRL----FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFE 303
L+ Q G N L +L + D V+F+G++ +C+ + ++ G Q+
Sbjct: 107 ILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHC 166
Query: 304 SMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVL 348
M K+ G+ + ++ + + G + EAR +L RD VL
Sbjct: 167 LMVKQ-GLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVL 210
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 185/313 (59%), Gaps = 2/313 (0%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMA 92
+F D++ ++ ++WT++I+G T G + ++++M E E Y + A + +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS 228
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
+ G Q H+ +IK GF+ N+ ++++D+YC+C + A+ F EM K++++W L+
Sbjct: 229 VTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT-LIS 287
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISF 212
+ S EA+ +F + G VP+ +T S++++C N+A+L G Q HG G
Sbjct: 288 ELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKN 347
Query: 213 VTVSNALVSLYGKCGSIEDCHRLFSEMT-FKDEVSWTALVSAYSQFGKANETIRLFESML 271
V ++NAL+ +Y KCG+I D R+F E+ ++ VSWT+++ Y G E + LF+ M+
Sbjct: 348 VELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMV 407
Query: 272 THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRL 331
+ G++PD++ F+ VLS C LVEKG + F M E+GI P +D Y+C++DL RAG++
Sbjct: 408 SSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKI 467
Query: 332 EEARDFINQMLFR 344
EA + + +M F+
Sbjct: 468 GEAYELVERMPFK 480
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 170/324 (52%), Gaps = 3/324 (0%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
++E++R LF +M +RD ++WT+MI+G + + A + F EM + +++T S+L
Sbjct: 60 LVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLK 119
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCR-SVKSAETVFKEMSYKNVV 144
+C + L G H ++K G + ++Y +A+++MY C ++++A +F+++ KN V
Sbjct: 120 SCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDV 179
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
+WT ++ G+ G +K++ M + + + + ++ S+ G Q H
Sbjct: 180 TWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASV 239
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
+ G S + V N+++ LY +CG + + F EM KD ++W L+S + ++E +
Sbjct: 240 IKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELER-SDSSEAL 298
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
+F+ + G P+ TF +++ C+ + G Q+ + + G + + +ID+
Sbjct: 299 LMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFR-RGFNKNVELANALIDM 357
Query: 325 FSRAGRLEEARDFINQMLFRDSVL 348
+++ G + +++ +++ R +++
Sbjct: 358 YAKCGNIPDSQRVFGEIVDRRNLV 381
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 133/254 (52%), Gaps = 7/254 (2%)
Query: 95 EGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYG 154
E +Q Y K +I A + +V + K V+ A ++F EM ++VV+WTAM+ GY
Sbjct: 29 ESSQNTEYPPYKPKKHHILATNLIVSYFEKGL-VEEARSLFDEMPDRDVVAWTAMITGYA 87
Query: 155 QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT 214
+ Y+ A + F +M K G P++FTL SV+ SC N+ L GA HG+ + G+ +
Sbjct: 88 SSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLY 147
Query: 215 VSNALVSLYGKCG-SIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTH 273
V NA++++Y C ++E +F ++ K++V+WT L++ ++ G +++++ ML
Sbjct: 148 VDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLE 207
Query: 274 GLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKE--HGIIPIQDHYSCIIDLFSRAGRL 331
+ + + V G QI S+ K +P+ + I+DL+ R G L
Sbjct: 208 NAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMN---SILDLYCRCGYL 264
Query: 332 EEARDFINQMLFRD 345
EA+ + ++M +D
Sbjct: 265 SEAKHYFHEMEDKD 278
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 180/331 (54%), Gaps = 4/331 (1%)
Query: 9 WICIRKWDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM 68
++C + Y+ G++ +++ LF M +RD I WT+M++G Q G +A++ +REM
Sbjct: 152 FVCSSVLNLYMKCGKM---DEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREM 208
Query: 69 RSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSV 128
++E D+ +L A G + + G H Y+ +TG N+ ++LVDMY K +
Sbjct: 209 QNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFI 268
Query: 129 KSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSC 188
+ A VF M +K VSW +++ G+ QNG + +A + +MQ G PD TL V+ +C
Sbjct: 269 EVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVAC 328
Query: 189 GNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWT 248
+ SL+ G H L ++ VT + AL+ +Y KCG++ +F + KD V W
Sbjct: 329 SQVGSLKTGRLVHCYILKRHVLDRVTAT-ALMDMYSKCGALSSSREIFEHVGRKDLVCWN 387
Query: 249 ALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKE 308
++S Y G E + LF M ++PD TF +LS S + LVE+G F M +
Sbjct: 388 TMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINK 447
Query: 309 HGIIPIQDHYSCIIDLFSRAGRLEEARDFIN 339
+ I P + HY C+IDL +RAGR+EEA D IN
Sbjct: 448 YKIQPSEKHYVCLIDLLARAGRVEEALDMIN 478
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 175/326 (53%), Gaps = 2/326 (0%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
GR+ I +R++F ++ +R + SMI ++ E + ++ +M +E ++ D TF
Sbjct: 61 GRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFT 120
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
+ AC + L++G + G+K++++ S+++++Y KC + AE +F +M+ +
Sbjct: 121 MTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKR 180
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
+V+ WT M+ G+ Q G S +AV+ + +MQ G D + ++ + G+L + G H
Sbjct: 181 DVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVH 240
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKAN 261
G +GL V V +LV +Y K G IE R+FS M FK VSW +L+S ++Q G AN
Sbjct: 241 GYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLAN 300
Query: 262 ETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCI 321
+ M + G +PD VT +GVL CS+ ++ G + + K H + + + +
Sbjct: 301 KAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA--TAL 358
Query: 322 IDLFSRAGRLEEARDFINQMLFRDSV 347
+D++S+ G L +R+ + +D V
Sbjct: 359 MDMYSKCGALSSSREIFEHVGRKDLV 384
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 199 QFHGIALVSG-LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQF 257
Q H + +G L++ ++S L++ G+ G I ++F E+ + + +++ YS+
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH 317
+E +RL++ M+ ++PD TF + C ++EKG ++ K D
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVW---CKAVDFGYKNDV 151
Query: 318 YSC--IIDLFSRAGRLEEARDFINQMLFRDSV 347
+ C +++L+ + G+++EA +M RD +
Sbjct: 152 FVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVI 183
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 179/314 (57%)
Query: 31 RQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGV 90
R +F M R+ I+ T++ISG +N LH + + +F MR ++ + T+ S L AC G
Sbjct: 210 RGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGS 269
Query: 91 MALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAML 150
+ EG Q H+ + K G + + SAL+DMY KC S++ A T+F+ + + VS T +L
Sbjct: 270 QRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVIL 329
Query: 151 VGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLI 210
VG QNG EEA++ F M + GV D + +V+ SL G Q H + +
Sbjct: 330 VGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFS 389
Query: 211 SFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESM 270
V+N L+++Y KCG + D +F M ++ VSW ++++A+++ G ++L+E M
Sbjct: 390 GNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEM 449
Query: 271 LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGR 330
T +KP VTF+ +L CS L++KG ++ M + HGI P +HY+CIID+ RAG
Sbjct: 450 TTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGL 509
Query: 331 LEEARDFINQMLFR 344
L+EA+ FI+ + +
Sbjct: 510 LKEAKSFIDSLPLK 523
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 164/342 (47%), Gaps = 19/342 (5%)
Query: 15 WDSYLVL----GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRS 70
W+S L L G+L+ D+ +LF +M RD IS + G +N RE F ++
Sbjct: 93 WNSLLSLYAKCGKLV---DAIKLFDEMPMRDVISQNIVFYGFLRN---RETESGFVLLK- 145
Query: 71 EMLET---DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRS 127
ML + D T +L+ C H+ I +G+ I G+ L+ Y KC
Sbjct: 146 RMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGC 205
Query: 128 VKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISS 187
S VF MS++NV++ TA++ G +N E+ +++F M++ V P+ T S +++
Sbjct: 206 SVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAA 265
Query: 188 CGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSW 247
C + EG Q H + G+ S + + +AL+ +Y KCGSIED +F T DEVS
Sbjct: 266 CSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSM 325
Query: 248 TALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK 307
T ++ +Q G E I+ F ML G++ D VL V + G Q+ + K
Sbjct: 326 TVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIK 385
Query: 308 EH--GIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
G + + +I+++S+ G L +++ +M R+ V
Sbjct: 386 RKFSGNTFVNN---GLINMYSKCGDLTDSQTVFRRMPKRNYV 424
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 109/251 (43%), Gaps = 31/251 (12%)
Query: 132 ETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVP--------------- 176
E V ++ +V W ++L Y + G +A+K+F +M V+
Sbjct: 79 EPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETE 138
Query: 177 ---------------DDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVS 221
D TL V+S C H +A++SG ++V N L++
Sbjct: 139 SGFVLLKRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLIT 198
Query: 222 LYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVT 281
Y KCG +F M+ ++ ++ TA++S + + +RLF M + P+ VT
Sbjct: 199 SYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVT 258
Query: 282 FIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
++ L+ CS ++ + +G QI + K +GI S ++D++S+ G +E+A
Sbjct: 259 YLSALAACSGSQRIVEGQQIHALLWK-YGIESELCIESALMDMYSKCGSIEDAWTIFEST 317
Query: 342 LFRDSVLMQLV 352
D V M ++
Sbjct: 318 TEVDEVSMTVI 328
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ DS+ +F M +R+ +SW SMI+ ++G A+ ++ EM + ++ TF S+L A
Sbjct: 408 LTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHA 467
Query: 87 CGGVMALQEGNQAHSYIIKT-GFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK-NVV 144
C V + +G + + + + G + + ++DM + +K A++ + K +
Sbjct: 468 CSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCK 527
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPD 177
W A+L +G +E V + Q + PD
Sbjct: 528 IWQALLGACSFHGDTE--VGEYAAEQLFQTAPD 558
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 182/323 (56%), Gaps = 3/323 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I ++R++F + D + WT+MI G T NG EA+ +F++M+ ++ + T S+L+
Sbjct: 293 ISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSG 352
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
CG + L+ G H IK G D A +ALV MY KC + A+ VF+ S K++V+W
Sbjct: 353 CGLIENLELGRSVHGLSIKVGIWDTNVA-NALVHMYAKCYQNRDAKYVFEMESEKDIVAW 411
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
+++ G+ QNG EA+ +F M V P+ T+ S+ S+C +L SL G+ H ++
Sbjct: 412 NSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVK 471
Query: 207 SGLI--SFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
G + S V V AL+ Y KCG + +F + K+ ++W+A++ Y + G ++
Sbjct: 472 LGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSL 531
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
LFE ML KP++ TF +LS C T +V +G + F SM K++ P HY+C++D+
Sbjct: 532 ELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDM 591
Query: 325 FSRAGRLEEARDFINQMLFRDSV 347
+RAG LE+A D I +M + V
Sbjct: 592 LARAGELEQALDIIEKMPIQPDV 614
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 182/331 (54%), Gaps = 8/331 (2%)
Query: 12 IRKWDSYLVLGRLLM------IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVF 65
+ +D+ ++ G L M I+ + ++F D+ R+ + WTSMI+G +N L E + +F
Sbjct: 171 VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLF 230
Query: 66 REMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKC 125
MR + ++YT+G+++ AC + AL +G H ++K+G + + ++L+DMY KC
Sbjct: 231 NRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKC 290
Query: 126 RSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVI 185
+ +A VF E S+ ++V WTAM+VGY NG EA+ +F M+ + P+ T+ SV+
Sbjct: 291 GDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVL 350
Query: 186 SSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEV 245
S CG + +LE G HG+++ G+ V+NALV +Y KC D +F + KD V
Sbjct: 351 SGCGLIENLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIV 409
Query: 246 SWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESM 305
+W +++S +SQ G +E + LF M + + P+ VT + S C+ + G+ +
Sbjct: 410 AWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYS 469
Query: 306 TKEHGIIPIQDHY-SCIIDLFSRAGRLEEAR 335
K + H + ++D +++ G + AR
Sbjct: 470 VKLGFLASSSVHVGTALLDFYAKCGDPQSAR 500
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 145/274 (52%), Gaps = 1/274 (0%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
+D+R +F + E D W M+ N E + ++ + D F L AC
Sbjct: 93 KDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKAC 152
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
+ L G + H ++K DN+ + L+DMY KC +KSA VF +++ +NVV WT
Sbjct: 153 TELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWT 211
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
+M+ GY +N EE + +F M++ V+ +++T G++I +C L++L +G FHG + S
Sbjct: 212 SMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKS 271
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
G+ + +L+ +Y KCG I + R+F+E + D V WTA++ Y+ G NE + LF
Sbjct: 272 GIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLF 331
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQI 301
+ M +KP+ VT VLS C +E G +
Sbjct: 332 QKMKGVEIKPNCVTIASVLSGCGLIENLELGRSV 365
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 126/267 (47%), Gaps = 7/267 (2%)
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN 142
+L+ C + +L+ Q+H + G +I + LV +Y K A VF ++ +
Sbjct: 50 LLSKCTNIDSLR---QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
W ML Y N S E VK++ + K+G DD + +C L L+ G + H
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH- 165
Query: 203 IALVSGLISFVTVS-NALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKAN 261
LV + SF V L+ +Y KCG I+ H++F+++T ++ V WT++++ Y +
Sbjct: 166 CQLVK-VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 224
Query: 262 ETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCI 321
E + LF M + + ++ T+ ++ C++ + +G + K GI + +
Sbjct: 225 EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKS-GIELSSCLVTSL 283
Query: 322 IDLFSRAGRLEEARDFINQMLFRDSVL 348
+D++ + G + AR N+ D V+
Sbjct: 284 LDMYVKCGDISNARRVFNEHSHVDLVM 310
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 218 bits (554), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 180/318 (56%), Gaps = 2/318 (0%)
Query: 26 MIEDSRQLFCDMRERDSIS--WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSM 83
++ D+R++F + + +S + ++ISG T N +A +FR M+ + D T +
Sbjct: 103 LVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGL 162
Query: 84 LTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV 143
+ C L G H +K G + ++ + MY KC SV++ +F EM K +
Sbjct: 163 VPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGL 222
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGI 203
++W A++ GY QNG + + ++++ M+ GV PD FTL SV+SSC +L + + G + +
Sbjct: 223 ITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKL 282
Query: 204 ALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANET 263
+G + V VSNA +S+Y +CG++ +F M K VSWTA++ Y G
Sbjct: 283 VESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIG 342
Query: 264 IRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIID 323
+ LF+ M+ G++PD F+ VLS CS + L +KG ++F +M +E+ + P +HYSC++D
Sbjct: 343 LMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVD 402
Query: 324 LFSRAGRLEEARDFINQM 341
L RAGRL+EA +FI M
Sbjct: 403 LLGRAGRLDEAMEFIESM 420
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 154/308 (50%), Gaps = 3/308 (0%)
Query: 42 SISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHS 101
S W + L E+I ++R M D ++F +L +C + G Q H
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 102 YIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE--MSYKNVVSWTAMLVGYGQNGYS 159
++ K G + + +AL+ MYCKC V A VF+E S + V + A++ GY N
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 160 EEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNAL 219
+A +F M++ GV D T+ ++ C L G HG + GL S V V N+
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197
Query: 220 VSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDK 279
+++Y KCGS+E RLF EM K ++W A++S YSQ G A + + L+E M + G+ PD
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
Query: 280 VTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFIN 339
T + VLS C+ + G+++ + + + +G +P + I +++R G L +AR +
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGK-LVESNGFVPNVFVSNASISMYARCGNLAKARAVFD 316
Query: 340 QMLFRDSV 347
M + V
Sbjct: 317 IMPVKSLV 324
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 173/319 (54%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
G+ +E +R++F M + ++W SMI G G + +++ M E Q T
Sbjct: 254 GKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLT 313
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
S+L AC L G H Y+I++ +IY +L+D+Y KC AETVF +
Sbjct: 314 SILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
SW M+ Y G +AV+++ M GV PD T SV+ +C LA+LE+G Q H
Sbjct: 374 VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIH 433
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKAN 261
S L + + +AL+ +Y KCG+ ++ R+F+ + KD VSWT ++SAY G+
Sbjct: 434 LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPR 493
Query: 262 ETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCI 321
E + F+ M GLKPD VT + VLS C L+++G + F M ++GI PI +HYSC+
Sbjct: 494 EALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCM 553
Query: 322 IDLFSRAGRLEEARDFINQ 340
ID+ RAGRL EA + I Q
Sbjct: 554 IDILGRAGRLLEAYEIIQQ 572
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 176/322 (54%), Gaps = 1/322 (0%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
+ E+S Q+F +M ERD SW ++IS Q+G +A+++F M S E + + ++
Sbjct: 157 LFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAIS 216
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
AC ++ L+ G + H +K GF+ + Y SALVDMY KC ++ A VF++M K++V+
Sbjct: 217 ACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVA 276
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W +M+ GY G S+ V+I M G P TL S++ +C +L G HG +
Sbjct: 277 WNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVI 336
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
S + + + V+ +L+ LY KCG +FS+ SW ++S+Y G + +
Sbjct: 337 RSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVE 396
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
+++ M++ G+KPD VTF VL CS+ +EKG QI S++ E + + S ++D++
Sbjct: 397 VYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS-ESRLETDELLLSALLDMY 455
Query: 326 SRAGRLEEARDFINQMLFRDSV 347
S+ G +EA N + +D V
Sbjct: 456 SKCGNEKEAFRIFNSIPKKDVV 477
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 155/296 (52%), Gaps = 5/296 (1%)
Query: 36 DMRERDSISWTSMISGCTQNGLHREAIDVF-REMRSEMLETDQYTFGSMLTACGGVMALQ 94
D+R D W S++SG ++N + + ++VF R + + D +TF +++ A G +
Sbjct: 66 DIRS-DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREF 124
Query: 95 EGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYG 154
G H+ ++K+G+ ++ S+LV MY K +++ VF EM ++V SW ++ +
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 155 QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT 214
Q+G +E+A+++F M+ G P+ +L IS+C L LE G + H + G
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
V++ALV +YGKC +E +F +M K V+W +++ Y G + + + M+ G
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 275 LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC-IIDLFSRAG 329
+P + T +L CSR+R + G I + + ++ + +C +IDL+ + G
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR--SVVNADIYVNCSLIDLYFKCG 358
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 8/265 (3%)
Query: 82 SMLTAC-GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY 140
S+L C +L+ H I+ G + ++ +L+++Y C+ SA VF+
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 141 K-NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGV-VPDDFTLGSVISSCGNLASLEEGA 198
+ +V W +++ GY +N + +++F + + VPD FT +VI + G L G
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 199 QFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFG 258
H + + SG + V V+++LV +Y K E+ ++F EM +D SW ++S + Q G
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 259 KANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY 318
+A + + LF M + G +P+ V+ +S CSR +E+G +I K+ + D Y
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL---DEY 244
Query: 319 --SCIIDLFSRAGRLEEARDFINQM 341
S ++D++ + LE AR+ +M
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKM 269
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 188/305 (61%), Gaps = 2/305 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
IE++++LF ++ +D +SW +MISG + G ++EA+++F++M + D+ T ++++A
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C +++ G Q H +I GF N+ +AL+D+Y KC +++A +F+ + YK+V+SW
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGI--A 204
++ GY +EA+ +F +M + G P+D T+ S++ +C +L +++ G H
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
+ G+ + ++ +L+ +Y KCG IE H++F+ + K SW A++ ++ G+A+ +
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 455
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
LF M G++PD +TF+G+LS CS + +++ G IF +MT+++ + P +HY C+IDL
Sbjct: 456 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 515
Query: 325 FSRAG 329
+G
Sbjct: 516 LGHSG 520
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 166/344 (48%), Gaps = 32/344 (9%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMA 92
+F ++E + + W +M G + A+ ++ M S L + YTF +L +C A
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
+EG Q H +++K G ++Y ++L+ MY + ++ A VF + +++VVS+TA++ G
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 153 YGQNGYSE-------------------------------EAVKIFCDMQKYGVVPDDFTL 181
Y GY E EA+++F DM K V PD+ T+
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 182 GSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF 241
+V+S+C S+E G Q H G S + + NAL+ LY KCG +E LF + +
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 242 KDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQI 301
KD +SW L+ Y+ E + LF+ ML G P+ VT + +L C+ ++ G I
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 302 FESMTKE-HGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFR 344
+ K G+ + +ID++++ G +E A N +L +
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 433
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 141/301 (46%), Gaps = 40/301 (13%)
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYC----KCRSVKSAETVFKE 137
S+L C LQ H+ +IK G + YA S L++ +C + A +VFK
Sbjct: 38 SLLHNCK---TLQSLRIIHAQMIKIGLHNTNYALSKLIE-FCILSPHFEGLPYAISVFKT 93
Query: 138 MSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG 197
+ N++ W M G+ + A+K++ M G++P+ +T V+ SC + +EG
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 198 AQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCH------------------------ 233
Q HG L G + V +L+S+Y + G +ED H
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 234 -------RLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVL 286
+LF E+ KD VSW A++S Y++ G E + LF+ M+ ++PD+ T + V+
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 287 SVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDS 346
S C+++ +E G Q+ +HG + +IDL+S+ G LE A ++ ++D
Sbjct: 274 SACAQSGSIELGRQV-HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 332
Query: 347 V 347
+
Sbjct: 333 I 333
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 171/309 (55%), Gaps = 3/309 (0%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMA 92
LF + R+ D +++ +MI G T NG ++ +F+E+ T S++ G +M
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML 337
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
+ H Y +K+ F + +AL +Y K ++SA +F E K++ SW AM+ G
Sbjct: 338 IY---AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISF 212
Y QNG +E+A+ +F +MQK P+ T+ ++S+C L +L G H + + S
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 213 VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLT 272
+ VS AL+ +Y KCGSI + RLF MT K+EV+W ++S Y G+ E + +F ML
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 273 HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLE 332
G+ P VTF+ VL CS LV++G++IF SM +G P HY+C++D+ RAG L+
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 333 EARDFINQM 341
A FI M
Sbjct: 575 RALQFIEAM 583
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 171/347 (49%), Gaps = 25/347 (7%)
Query: 16 DSYLVLG--------RLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFRE 67
DS L+LG + +ED+R++F M E+D+I W +MISG +N ++ E+I VFR+
Sbjct: 151 DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRD 210
Query: 68 MRSEM-LETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCR 126
+ +E D T +L A + L+ G Q HS KTG + Y + + +Y KC
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270
Query: 127 SVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVIS 186
+K +F+E ++V++ AM+ GY NG +E ++ +F ++ G TL S++
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330
Query: 187 SCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS 246
G+L + HG L S +S +VS AL ++Y K IE +LF E K S
Sbjct: 331 VSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Query: 247 WTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMT 306
W A++S Y+Q G + I LF M P+ VT +LS C++ + G +
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV----- 442
Query: 307 KEHGIIPIQDHYSCI------IDLFSRAGRLEEARDFINQMLFRDSV 347
H ++ D S I I ++++ G + EAR + M ++ V
Sbjct: 443 --HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEV 487
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 136/270 (50%), Gaps = 4/270 (1%)
Query: 20 VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYT 79
V +L IE +R+LF + E+ SW +MISG TQNGL +AI +FREM+ + T
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 80 FGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS 139
+L+AC + AL G H + T F+ +IY +AL+ MY KC S+ A +F M+
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 482
Query: 140 YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ 199
KN V+W M+ GYG +G +EA+ IF +M G+ P T V+ +C + ++EG +
Sbjct: 483 KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDE 542
Query: 200 -FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSAYSQF 257
F+ + G V +V + G+ G ++ + M+ + S W L+ A
Sbjct: 543 IFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH 602
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIGVLS 287
N + E + L PD V + +LS
Sbjct: 603 KDTNLARTVSEKLFE--LDPDNVGYHVLLS 630
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 122/268 (45%), Gaps = 2/268 (0%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR-SEMLETDQYTFGSMLTACG 88
+R +F ++ D + ++ G + N ++ VF +R S L+ + T+ ++A
Sbjct: 71 ARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
G + G H + G + GS +V MY K V+ A VF M K+ + W
Sbjct: 131 GFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNT 190
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVP-DDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
M+ GY +N E++++F D+ D TL ++ + L L G Q H +A +
Sbjct: 191 MISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT 250
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
G S V +SLY KCG I+ LF E D V++ A++ Y+ G+ ++ LF
Sbjct: 251 GCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLV 295
+ ++ G + T + ++ V L+
Sbjct: 311 KELMLSGARLRSSTLVSLVPVSGHLMLI 338
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 112/250 (44%), Gaps = 8/250 (3%)
Query: 98 QAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNG 157
Q H+ II GF+++I + L ++ A +F + +V + ++ G+ N
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 158 YSEEAVKIFCDMQK-YGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
++ +F ++K + P+ T IS+ G HG A+V G S + +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG-L 275
+ +V +Y K +ED ++F M KD + W ++S Y + E+I++F ++
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 276 KPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEAR 335
+ D T + +L + + + G QI S+ + G + I L+S+ G+++
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQI-HSLATKTGCYSHDYVLTGFISLYSKCGKIK--- 273
Query: 336 DFINQMLFRD 345
+ LFR+
Sbjct: 274 --MGSALFRE 281
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 182/337 (54%), Gaps = 34/337 (10%)
Query: 43 ISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSY 102
+++ +MISG G ++EA+++ R M S +E D++T+ S++ AC LQ G Q H+Y
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 103 IIKTGFKD-NIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGY-------- 153
+++ +D + + ++LV +Y KC A +F++M K++VSW A+L GY
Sbjct: 312 VLRR--EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369
Query: 154 -----------------------GQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGN 190
+NG+ EE +K+F M++ G P D+ I SC
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 191 LASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTAL 250
L + G Q+H L G S ++ NAL+++Y KCG +E+ ++F M D VSW AL
Sbjct: 430 LGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNAL 489
Query: 251 VSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHG 310
++A Q G E + ++E ML G++PD++T + VL+ CS LV++G + F+SM +
Sbjct: 490 IAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYR 549
Query: 311 IIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
I P DHY+ +IDL R+G+ +A I + F+ +
Sbjct: 550 IPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTA 586
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 165/388 (42%), Gaps = 76/388 (19%)
Query: 40 RDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGN-- 97
RD++ + +MI+G + N AI++F +M+ E + D +TF S+L ++A E
Sbjct: 111 RDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLA-LVADDEKQCV 169
Query: 98 QAHSYIIKTGFKDNIYAGSALVDMYCKCRS----VKSAETVFKEMSYKNVVSWTAMLVGY 153
Q H+ +K+G +ALV +Y KC S + SA VF E+ K+ SWT M+ GY
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY 229
Query: 154 GQNGY--------------------------------SEEAVKIFCDMQKYGVVPDDFTL 181
+NGY +EA+++ M G+ D+FT
Sbjct: 230 VKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTY 289
Query: 182 GSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF 241
SVI +C L+ G Q H L SF N+LVSLY KCG ++ +F +M
Sbjct: 290 PSVIRACATAGLLQLGKQVHAYVLRREDFSF-HFDNSLVSLYYKCGKFDEARAIFEKMPA 348
Query: 242 KDEVSWTALVSAY-------------------------------SQFGKANETIRLFESM 270
KD VSW AL+S Y ++ G E ++LF M
Sbjct: 349 KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCM 408
Query: 271 LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGR 330
G +P F G + C+ G Q + K G + +I ++++ G
Sbjct: 409 KREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI-GFDSSLSAGNALITMYAKCGV 467
Query: 331 LEEARDFINQMLFRDSV----LMQLVGQ 354
+EEAR M DSV L+ +GQ
Sbjct: 468 VEEARQVFRTMPCLDSVSWNALIAALGQ 495
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 139/331 (41%), Gaps = 82/331 (24%)
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS------------ 139
+LQ H II GF+ + + L+D+YCK + A +F E+S
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 140 ---------------------YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDD 178
++ V + AM+ G+ N A+ +FC M+ G PD+
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 179 FTLGSVISSCGNLASLEEG-AQFHGIALVSGLISFVTVSNALVSLYGKCGS----IEDCH 233
FT SV++ +A E+ QFH AL SG +VSNALVS+Y KC S +
Sbjct: 149 FTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208
Query: 234 RLFSEMTFKDEVSWT--------------------------------ALVSAYSQFGKAN 261
++F E+ KDE SWT A++S Y G
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268
Query: 262 ETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYS-- 319
E + + M++ G++ D+ T+ V+ C+ L++ G Q+ H + ++ +S
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQV-------HAYVLRREDFSFH 321
Query: 320 ---CIIDLFSRAGRLEEARDFINQMLFRDSV 347
++ L+ + G+ +EAR +M +D V
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLV 352
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 20/177 (11%)
Query: 15 WDSYLVLGRLLM--------IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFR 66
+DS L G L+ +E++RQ+F M DS+SW ++I+ Q+G EA+DV+
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYE 507
Query: 67 EMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHS-----YIIKTGFKDNIYAGSALVDM 121
EM + + D+ T ++LTAC + +G + Y I G + YA L+D+
Sbjct: 508 EMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPG--ADHYA--RLIDL 563
Query: 122 YCKCRSVKSAETVFKEMSYKNVVS-WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPD 177
C+ AE+V + + +K W A+L G +G E + I + +G++P+
Sbjct: 564 LCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNME--LGIIAADKLFGLIPE 618
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 184/316 (58%), Gaps = 7/316 (2%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ S +F MRERD +SW +MIS QNGL E + + EM+ + + D T ++L+A
Sbjct: 369 VHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSA 428
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAG--SALVDMYCKCRSVKSAETVFKEMSY--KN 142
+ + G Q H+++I+ G + + G S L+DMY K ++ ++ +F+ Y ++
Sbjct: 429 ASNLRNKEIGKQTHAFLIRQGIQ---FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERD 485
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
+W +M+ GY QNG++E+ +F M + + P+ T+ S++ +C + S++ G Q HG
Sbjct: 486 QATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHG 545
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
++ L V V++ALV +Y K G+I+ +FS+ ++ V++T ++ Y Q G
Sbjct: 546 FSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGER 605
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
I LF SM G+KPD +TF+ VLS CS + L+++G +IFE M + + I P +HY CI
Sbjct: 606 AISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCIT 665
Query: 323 DLFSRAGRLEEARDFI 338
D+ R GR+ EA +F+
Sbjct: 666 DMLGRVGRVNEAYEFV 681
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 175/334 (52%), Gaps = 25/334 (7%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFRE-MRSEMLETDQYTFGSMLT 85
IE SR++F ER+ W +MI QN E+I++F E + S+ + +D+ T+ L
Sbjct: 267 IESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTY---LL 323
Query: 86 ACGGVMALQE---GNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN 142
A V ALQ+ G Q H ++ K + I ++L+ MY +C SV + VF M ++
Sbjct: 324 AASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERD 383
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
VVSW M+ + QNG +E + + +MQK G D T+ +++S+ NL + E G Q H
Sbjct: 384 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHA 443
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLF--SEMTFKDEVSWTALVSAYSQFGKA 260
+ G I F +++ L+ +Y K G I +LF S +D+ +W +++S Y+Q G
Sbjct: 444 FLIRQG-IQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHT 502
Query: 261 NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY-- 318
+T +F ML ++P+ VT +L CS+ V+ G Q+ HG I+ +
Sbjct: 503 EKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQL-------HG-FSIRQYLDQ 554
Query: 319 -----SCIIDLFSRAGRLEEARDFINQMLFRDSV 347
S ++D++S+AG ++ A D +Q R+SV
Sbjct: 555 NVFVASALVDMYSKAGAIKYAEDMFSQTKERNSV 588
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 157/319 (49%), Gaps = 10/319 (3%)
Query: 31 RQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGV 90
R++F +MR ++ ++W ++IS + G + EA F M ++ +F ++ A
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
Query: 91 MALQEGNQAHSYIIKTG--FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
++++ N + ++K G + +++ S+ + MY + ++S+ VF +N+ W
Sbjct: 228 RSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNT 287
Query: 149 MLVGYGQNGYSEEAVKIFCD-MQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
M+ Y QN E++++F + + +V D+ T S+ L +E G QFHG +
Sbjct: 288 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
+ + N+L+ +Y +CGS+ +F M +D VSW ++SA+ Q G +E + L
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSR 327
M G K D +T +LS S R E G Q + ++ I + S +ID++S+
Sbjct: 408 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG--IQFEGMNSYLIDMYSK 465
Query: 328 AGRLEEARDFINQMLFRDS 346
+G + I+Q LF S
Sbjct: 466 SGLIR-----ISQKLFEGS 479
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 153/329 (46%), Gaps = 12/329 (3%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR--SEMLETDQYTFGSMLTAC 87
+RQLF + + ++ W ++I G N L EA+ + M+ + D YT+ S L AC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKS------AETVFKEMSYK 141
L+ G H ++I+ + ++L++MY C + VF M K
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
NVV+W ++ Y + G + EA + F M + V P + +V + S+++ F+
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 202 GIALVSG--LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
G+ L G + + V ++ +S+Y + G IE R+F ++ W ++ Y Q
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDC 297
Query: 260 ANETIRLF-ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY 318
E+I LF E++ + + D+VT++ S S + VE G Q ++K +PI
Sbjct: 298 LVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVN 357
Query: 319 SCIIDLFSRAGRLEEARDFINQMLFRDSV 347
S ++ ++SR G + ++ M RD V
Sbjct: 358 SLMV-MYSRCGSVHKSFGVFLSMRERDVV 385
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 108/233 (46%), Gaps = 11/233 (4%)
Query: 123 CKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVP--DDFT 180
C+ + + A +F + V W +++G+ N EA+ + M+K D +T
Sbjct: 50 CQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYT 109
Query: 181 LGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDC------HR 234
S + +C +L+ G H + S V N+L+++Y C + DC +
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRK 169
Query: 235 LFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRL 294
+F M K+ V+W L+S Y + G+ E R F M+ +KP V+F+ V S +R
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 295 VEKGNQIFESMTKEHGIIPIQDHY--SCIIDLFSRAGRLEEARDFINQMLFRD 345
++K N +F + + G ++D + S I +++ G +E +R + + R+
Sbjct: 230 IKKAN-VFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERN 281
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 188/350 (53%), Gaps = 32/350 (9%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
M+ +R +F M ERD +SW +M+ G Q+G EA+ ++E R ++ ++++F +LT
Sbjct: 128 MLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLT 187
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSA-------------- 131
AC LQ QAH ++ GF N+ +++D Y KC ++SA
Sbjct: 188 ACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHI 247
Query: 132 -----------------ETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGV 174
E +F EM KN VSWTA++ GY + G A+ +F M GV
Sbjct: 248 WTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGV 307
Query: 175 VPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHR 234
P+ FT S + + ++ASL G + HG + + + V ++L+ +Y K GS+E R
Sbjct: 308 KPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASER 367
Query: 235 LFSEMTFK-DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTR 293
+F K D V W ++SA +Q G ++ +R+ + M+ ++P++ T + +L+ CS +
Sbjct: 368 VFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSG 427
Query: 294 LVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLF 343
LVE+G + FESMT +HGI+P Q+HY+C+IDL RAG +E I +M F
Sbjct: 428 LVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPF 477
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 142/316 (44%), Gaps = 64/316 (20%)
Query: 80 FGSMLTACGGVMALQEGNQAHSYIIKTGFK-DNIYAGSALVDMYCKCRS----------- 127
S+L CG +L++G H ++ TGFK N + L+ MY KC
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 128 ---------------VKS-----AETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFC 167
VKS A VF M ++VVSW M++GY Q+G EA+ +
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 168 DMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCG 227
+ ++ G+ ++F+ ++++C L+ Q HG LV+G +S V +S +++ Y KCG
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 228 SIEDCHRLFSEMTFKD-------------------------------EVSWTALVSAYSQ 256
+E R F EMT KD VSWTAL++ Y +
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 257 FGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQD 316
G N + LF M+ G+KP++ TF L + + G +I M + + + P
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN-VRPNAI 347
Query: 317 HYSCIIDLFSRAGRLE 332
S +ID++S++G LE
Sbjct: 348 VISSLIDMYSKSGSLE 363
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 47/224 (20%)
Query: 161 EAVKIFCDMQKYGV-VPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTV-SNA 218
+AV + + G+ +P D L S++ CG+ SL++G H ++G T+ SN
Sbjct: 29 QAVSRLESLTQQGIRLPFDL-LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNH 87
Query: 219 LVSLYGKCGSIEDCHRLFSEMTFK-------------------------------DEVSW 247
L+ +Y KCG D ++F +M + D VSW
Sbjct: 88 LIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSW 147
Query: 248 TALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK 307
+V Y+Q G +E + ++ G+K ++ +F G+L+ C ++R ++ Q
Sbjct: 148 NTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQ------- 200
Query: 308 EHGIIPIQDHYS------CIIDLFSRAGRLEEARDFINQMLFRD 345
HG + + S IID +++ G++E A+ ++M +D
Sbjct: 201 AHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKD 244
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 187/333 (56%), Gaps = 3/333 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E R++F + + +W +M+SG + + EAI FR+M+ + L+ D+ T +L++
Sbjct: 366 VETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSS 425
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE-MSYKNVVS 145
C + L+ G Q H +I+T N + S L+ +Y +C ++ +E +F + ++ ++
Sbjct: 426 CARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIAC 485
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVV-PDDFTLGSVISSCGNLASLEEGAQFHGIA 204
W +M+ G+ N +A+ +F M + V+ P++ + +V+SSC L SL G QFHG+
Sbjct: 486 WNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLV 545
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
+ SG +S V AL +Y KCG I+ + F + K+ V W ++ Y G+ +E +
Sbjct: 546 VKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAV 605
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
L+ M++ G KPD +TF+ VL+ CS + LVE G +I SM + HGI P DHY CI+D
Sbjct: 606 GLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDC 665
Query: 325 FSRAGRLEEARDFINQMLFR-DSVLMQLVGQPC 356
RAGRLE+A ++ SVL +++ C
Sbjct: 666 LGRAGRLEDAEKLAEATPYKSSSVLWEILLSSC 698
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 178/345 (51%), Gaps = 16/345 (4%)
Query: 12 IRKWDSYLVLG-RLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRS 70
+ W+++L ++ + ++ ++F M ERD +SW +MIS + G +A+ V++ M
Sbjct: 72 VYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVC 131
Query: 71 EMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCR-SVK 129
+ ++T S+L+AC V+ G + H +KTG NI+ G+AL+ MY KC V
Sbjct: 132 DGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVD 191
Query: 130 SAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVIS--- 186
VF+ +S N VS+TA++ G + EAV++F M + GV D L +++S
Sbjct: 192 YGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISA 251
Query: 187 ---SCGNLASL---EEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT 240
C +L+ + E G Q H +AL G + ++N+L+ +Y K + +F+EM
Sbjct: 252 PREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMP 311
Query: 241 FKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQ 300
+ VSW ++ + Q ++++++ M G +P++VT I VL C R+ VE G +
Sbjct: 312 EVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRR 371
Query: 301 IFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRD 345
IF S+ + P ++ ++ +S EEA QM F++
Sbjct: 372 IFSSIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQN 411
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 51/290 (17%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACG--- 88
++F + + + +S+T++I G + EA+ +FR M + ++ D ++L+
Sbjct: 195 RVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPRE 254
Query: 89 GVMALQE------GNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN 142
G +L E G Q H ++ GF +++ ++L+++Y K + + AE +F EM N
Sbjct: 255 GCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVN 314
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
VVSW M+VG+GQ S+++V+ M+ G P++ T SV+ +C
Sbjct: 315 VVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC-------------- 360
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
+ G +E R+FS + +W A++S YS + E
Sbjct: 361 ---------------------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEE 399
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGII 312
I F M LKPDK T +LS C+R R +E G QI HG++
Sbjct: 400 AISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI-------HGVV 442
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 32/225 (14%)
Query: 96 GNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAML----- 150
G H +I++ G K + Y + L+D+Y +C A VF EMS ++V SW A L
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 151 VG--------------------------YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSV 184
VG + G+ E+A+ ++ M G +P FTL SV
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 185 ISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCH-RLFSEMTFKD 243
+S+C + G + HG+A+ +GL + V NAL+S+Y KCG I D R+F ++ +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 244 EVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSV 288
EVS+TA++ ++ K E +++F M G++ D V +LS+
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSI 249
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 199/365 (54%), Gaps = 34/365 (9%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
D Y GR I +R +F +M RD ++W +MI + GL EA +F EM+ +
Sbjct: 154 DMYASCGR---INYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMP 210
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFK-------------------------- 109
D+ ++++ACG ++ + ++I+ +
Sbjct: 211 DEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFF 270
Query: 110 -----DNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVK 164
N++ +A+V Y KC + A+ +F + K++V WT M+ Y ++ Y +EA++
Sbjct: 271 RKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALR 330
Query: 165 IFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYG 224
+F +M G+ PD ++ SVIS+C NL L++ H V+GL S ++++NAL+++Y
Sbjct: 331 VFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYA 390
Query: 225 KCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIG 284
KCG ++ +F +M ++ VSW+++++A S G+A++ + LF M ++P++VTF+G
Sbjct: 391 KCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVG 450
Query: 285 VLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFR 344
VL CS + LVE+G +IF SMT E+ I P +HY C++DLF RA L EA + I M
Sbjct: 451 VLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVA 510
Query: 345 DSVLM 349
+V++
Sbjct: 511 SNVVI 515
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 161/338 (47%), Gaps = 32/338 (9%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
+SI + + +++ R I ++ +R DQ++F +L A V AL EG + H
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 134
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSE 160
K + + + +DMY C + A VF EMS+++VV+W M+ Y + G +
Sbjct: 135 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD 194
Query: 161 EAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH----------GIALVSGLI 210
EA K+F +M+ V+PD+ L +++S+CG ++ + L++ L+
Sbjct: 195 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALV 254
Query: 211 SFVT---------------------VSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTA 249
+ VS A+VS Y KCG ++D +F + KD V WT
Sbjct: 255 TMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTT 314
Query: 250 LVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEH 309
++SAY + E +R+FE M G+KPD V+ V+S C+ +++K + S +
Sbjct: 315 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWV-HSCIHVN 373
Query: 310 GIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
G+ + +I+++++ G L+ RD +M R+ V
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVV 411
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 184/307 (59%), Gaps = 2/307 (0%)
Query: 45 WTSMISGCTQNGLHREAIDVFREMR-SEMLETDQYTFGSMLTACGGVMALQEGNQAHSYI 103
W ++I G + G A ++REMR S ++E D +T+ ++ A + ++ G HS +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 104 IKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAV 163
I++GF IY ++L+ +Y C V SA VF +M K++V+W +++ G+ +NG EEA+
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 164 KIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLY 223
++ +M G+ PD FT+ S++S+C + +L G + H + GL + SN L+ LY
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 224 GKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESM-LTHGLKPDKVTF 282
+CG +E+ LF EM K+ VSWT+L+ + G E I LF+ M T GL P ++TF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 283 IGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQML 342
+G+L CS +V++G + F M +E+ I P +H+ C++DL +RAG++++A ++I M
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387
Query: 343 FRDSVLM 349
+ +V++
Sbjct: 388 MQPNVVI 394
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 134/238 (56%), Gaps = 3/238 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ + ++F M E+D ++W S+I+G +NG EA+ ++ EM S+ ++ D +T S+L+A
Sbjct: 172 VASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSA 231
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + AL G + H Y+IK G N+++ + L+D+Y +C V+ A+T+F EM KN VSW
Sbjct: 232 CAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW 291
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKY-GVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIA 204
T+++VG NG+ +EA+++F M+ G++P + T ++ +C + ++EG + F +
Sbjct: 292 TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR 351
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSAYSQFGKAN 261
+ + +V L + G ++ + M + V W L+ A + G ++
Sbjct: 352 EEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD 409
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 138/265 (52%), Gaps = 7/265 (2%)
Query: 89 GVMALQEGNQAHSYIIKTGFK-DNIYAGSALVDMYCKCRSVKS---AETVFKEMSYK-NV 143
GV ++ + Q H++ I+ G + G L+ S A VF ++ NV
Sbjct: 26 GVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV 85
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV-PDDFTLGSVISSCGNLASLEEGAQFHG 202
W ++ GY + G S A ++ +M+ G+V PD T +I + +A + G H
Sbjct: 86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
+ + SG S + V N+L+ LY CG + +++F +M KD V+W ++++ +++ GK E
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
+ L+ M + G+KPD T + +LS C++ + G ++ M K G+ + ++
Sbjct: 206 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-GLTRNLHSSNVLL 264
Query: 323 DLFSRAGRLEEARDFINQMLFRDSV 347
DL++R GR+EEA+ ++M+ ++SV
Sbjct: 265 DLYARCGRVEEAKTLFDEMVDKNSV 289
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 184/315 (58%), Gaps = 1/315 (0%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
++ +F D + +T+MISG NGL+ +++++FR + + ++ T S+L G
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGI 453
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
++AL+ G + H +IIK GF + G A++DMY KC + A +F+ +S +++VSW +M
Sbjct: 454 LLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSM 513
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
+ Q+ A+ IF M G+ D ++ + +S+C NL S G HG + L
Sbjct: 514 ITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSL 573
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFES 269
S V + L+ +Y KCG+++ +F M K+ VSW ++++A GK +++ LF
Sbjct: 574 ASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHE 633
Query: 270 ML-THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
M+ G++PD++TF+ ++S C V++G + F SMT+++GI P Q+HY+C++DLF RA
Sbjct: 634 MVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRA 693
Query: 329 GRLEEARDFINQMLF 343
GRL EA + + M F
Sbjct: 694 GRLTEAYETVKSMPF 708
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 163/314 (51%), Gaps = 1/314 (0%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
+D+ +LF M D+++W MISG Q+GL E++ F EM S + D TF S+L +
Sbjct: 291 DDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSV 350
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
L+ Q H YI++ +I+ SAL+D Y KCR V A+ +F + + +VV +T
Sbjct: 351 SKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
AM+ GY NG +++++F + K + P++ TL S++ G L +L+ G + HG +
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
G + + A++ +Y KCG + + +F ++ +D VSW ++++ +Q + I +F
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIF 530
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSR 327
M G+ D V+ LS C+ G I M K H + S +ID++++
Sbjct: 531 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAK 589
Query: 328 AGRLEEARDFINQM 341
G L+ A + M
Sbjct: 590 CGNLKAAMNVFKTM 603
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 163/338 (48%), Gaps = 18/338 (5%)
Query: 17 SYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETD 76
+YL G+ I+ +LF + ++D + W M++G + G I F MR + + +
Sbjct: 182 AYLEYGK---IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPN 238
Query: 77 QYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK 136
TF +L+ C + + G Q H ++ +G ++L+ MY KC A +F+
Sbjct: 239 AVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFR 298
Query: 137 EMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE 196
MS + V+W M+ GY Q+G EE++ F +M GV+PD T S++ S +LE
Sbjct: 299 MMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEY 358
Query: 197 GAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQ 256
Q H + + + +++AL+ Y KC + +FS+ D V +TA++S Y
Sbjct: 359 CKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLH 418
Query: 257 FGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQD 316
G +++ +F ++ + P+++T + +L V ++ G ++ HG I I+
Sbjct: 419 NGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGREL-------HGFI-IKK 470
Query: 317 HYS-------CIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ +ID++++ GR+ A + ++ RD V
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIV 508
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 131/266 (49%)
Query: 36 DMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQE 95
D+R W S+IS +NGL +A+ + +M + D TF ++ AC + +
Sbjct: 97 DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKG 156
Query: 96 GNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQ 155
+ + G N + S+L+ Y + + +F + K+ V W ML GY +
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 156 NGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTV 215
G + +K F M+ + P+ T V+S C + ++ G Q HG+ +VSG+ ++
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 216 SNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGL 275
N+L+S+Y KCG +D +LF M+ D V+W ++S Y Q G E++ F M++ G+
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 276 KPDKVTFIGVLSVCSRTRLVEKGNQI 301
PD +TF +L S+ +E QI
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQI 362
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 133/288 (46%), Gaps = 27/288 (9%)
Query: 74 ETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAET 133
ET +L AC L++G Q H+++I + Y ++ MY C S
Sbjct: 32 ETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGK 91
Query: 134 VFKEMSYK--NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNL 191
+F + + ++ W +++ + +NG +A+ + M +GV PD T ++ +C L
Sbjct: 92 MFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL 151
Query: 192 ASLEEGAQFHGIALVSGLISFVT------VSNALVSLYGKCGSIEDCHRLFSEMTFKDEV 245
+ F GI +S +S + V+++L+ Y + G I+ +LF + KD V
Sbjct: 152 KN------FKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCV 205
Query: 246 SWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESM 305
W +++ Y++ G + I+ F M + P+ VTF VLSVC+ L++ G Q+
Sbjct: 206 IWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL---- 261
Query: 306 TKEHGIIPIQ------DHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
HG++ + + ++ ++S+ GR ++A M D+V
Sbjct: 262 ---HGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTV 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 78/176 (44%), Gaps = 5/176 (2%)
Query: 175 VPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHR 234
+P +L ++ +C N L +G Q H +V+ + ++ +Y CGS DC +
Sbjct: 34 IPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGK 91
Query: 235 LFSEMTFKDEV--SWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRT 292
+F + + W +++S++ + G N+ + + ML G+ PD TF ++ C
Sbjct: 92 MFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL 151
Query: 293 RLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVL 348
+ KG G+ + S +I + G+++ +++L +D V+
Sbjct: 152 KNF-KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVI 206
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 190/325 (58%), Gaps = 2/325 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQN-GLHREAIDVFREMRSE-MLETDQYTFGSML 84
++D R++F M + +SWT++I+G +N L EAI++F EM ++ +E + +TF S
Sbjct: 321 VDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAF 380
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV 144
ACG + + G Q K G N ++++ M+ K ++ A+ F+ +S KN+V
Sbjct: 381 KACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLV 440
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
S+ L G +N E+A K+ ++ + + FT S++S N+ S+ +G Q H
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQV 500
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
+ GL V NAL+S+Y KCGSI+ R+F+ M ++ +SWT++++ +++ G A +
Sbjct: 501 VKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVL 560
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
F M+ G+KP++VT++ +LS CS LV +G + F SM ++H I P +HY+C++DL
Sbjct: 561 ETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDL 620
Query: 325 FSRAGRLEEARDFINQMLFRDSVLM 349
RAG L +A +FIN M F+ VL+
Sbjct: 621 LCRAGLLTDAFEFINTMPFQADVLV 645
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 167/325 (51%), Gaps = 8/325 (2%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
E++ ++F M E + ++WT MI+ C Q G REAI F +M E+D++T S+ +AC
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCR---SVKSAETVFKEMSYKNVV 144
+ L G Q HS+ I++G D++ +LVDMY KC SV VF M +V+
Sbjct: 280 AELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVM 337
Query: 145 SWTAMLVGYGQN-GYSEEAVKIFCDMQKYG-VVPDDFTLGSVISSCGNLASLEEGAQFHG 202
SWTA++ GY +N + EA+ +F +M G V P+ FT S +CGNL+ G Q G
Sbjct: 338 SWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLG 397
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
A GL S +V+N+++S++ K +ED R F ++ K+ VS+ + + +
Sbjct: 398 QAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQ 457
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
+L + L TF +LS + + KG QI + K G+ Q + +I
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALI 516
Query: 323 DLFSRAGRLEEARDFINQMLFRDSV 347
++S+ G ++ A N M R+ +
Sbjct: 517 SMYSKCGSIDTASRVFNFMENRNVI 541
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 159/304 (52%), Gaps = 10/304 (3%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
+RD +SW++M++ NG +AI VF E L + Y + +++ AC + G
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 99 AHSYIIKTG-FKDNIYAGSALVDMYCKC-RSVKSAETVFKEMSYKNVVSWTAMLVGYGQN 156
+++KTG F+ ++ G +L+DM+ K S ++A VF +MS NVV+WT M+ Q
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
G+ EA++ F DM G D FTL SV S+C L +L G Q H A+ SGL+ V S
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS 307
Query: 217 NALVSLYGKC---GSIEDCHRLFSEMTFKDEVSWTALVSAY-SQFGKANETIRLFESMLT 272
LV +Y KC GS++DC ++F M +SWTAL++ Y A E I LF M+T
Sbjct: 308 --LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365
Query: 273 HG-LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRL 331
G ++P+ TF C G Q+ K G+ + +I +F ++ R+
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLASNSSVANSVISMFVKSDRM 424
Query: 332 EEAR 335
E+A+
Sbjct: 425 EDAQ 428
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 142/282 (50%), Gaps = 13/282 (4%)
Query: 69 RSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSV 128
R + D TF S+L +C + G H+ +I+ + + ++L+ +Y K
Sbjct: 54 RDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDS 113
Query: 129 KSAETVFKEM---SYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVI 185
AE VF+ M ++VVSW+AM+ YG NG +A+K+F + + G+VP+D+ +VI
Sbjct: 114 AKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVI 173
Query: 186 SSCGNLASLEEGAQFHGIALVSGLI-SFVTVSNALVSLYGKC-GSIEDCHRLFSEMTFKD 243
+C N + G G + +G S V V +L+ ++ K S E+ +++F +M+ +
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN 233
Query: 244 EVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFE 303
V+WT +++ Q G E IR F M+ G + DK T V S C+ + G Q+
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL-H 292
Query: 304 SMTKEHGIIPIQDHYSC-IIDLFSRA---GRLEEARDFINQM 341
S G++ D C ++D++++ G +++ R ++M
Sbjct: 293 SWAIRSGLV---DDVECSLVDMYAKCSADGSVDDCRKVFDRM 331
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 189/340 (55%), Gaps = 19/340 (5%)
Query: 18 YLVLGRLLMIEDSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEML 73
Y +GR ED+ +LF M+E D ++W++ ISG Q GL EA+ V R+M S +
Sbjct: 305 YSQIGRF---EDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Query: 74 ETDQYTFGSMLTACGGVMALQEGNQAHSYIIK-------TGFKDNIYAGSALVDMYCKCR 126
+ ++ T S+L+ C V AL G + H Y IK G D + L+DMY KC+
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK 421
Query: 127 SVKSAETVFKEMSYK--NVVSWTAMLVGYGQNGYSEEAVKIFCDM--QKYGVVPDDFTLG 182
V +A +F +S K +VV+WT M+ GY Q+G + +A+++ +M + P+ FT+
Sbjct: 422 KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTIS 481
Query: 183 SVISSCGNLASLEEGAQFHGIALVSGLISF-VTVSNALVSLYGKCGSIEDCHRLFSEMTF 241
+ +C +LA+L G Q H AL + + + VSN L+ +Y KCGSI D +F M
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMA 541
Query: 242 KDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQI 301
K+EV+WT+L++ Y G E + +F+ M G K D VT + VL CS + ++++G +
Sbjct: 542 KNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEY 601
Query: 302 FESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
F M G+ P +HY+C++DL RAGRL A I +M
Sbjct: 602 FNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 172/339 (50%), Gaps = 42/339 (12%)
Query: 45 WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYII 104
W S+I NG + + +F M S D YTF + ACG + +++ G AH+ +
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVK 164
TGF N++ G+ALV MY +CRS+ A VF EMS +VVSW +++ Y + G + A++
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 165 IFCDM-QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLY 223
+F M ++G PD+ TL +V+ C +L + G Q H A+ S +I + V N LV +Y
Sbjct: 215 MFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMY 274
Query: 224 GKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFES-------------- 269
KCG +++ + +FS M+ KD VSW A+V+ YSQ G+ + +RLFE
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 270 ---------------------MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKE 308
ML+ G+KP++VT I VLS C+ + G +I K
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 309 HGIIPIQDH------YSCIIDLFSRAGRLEEARDFINQM 341
+ H + +ID++++ +++ AR + +
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL 433
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 175/373 (46%), Gaps = 49/373 (13%)
Query: 23 RLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEM-LETDQYTFG 81
R + D+R++F +M D +SW S+I + G + A+++F M +E D T
Sbjct: 174 RCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLV 233
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
++L C + G Q H + + + N++ G+ LVDMY KC + A TVF MS K
Sbjct: 234 NVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK 293
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQK------------------------------ 171
+VVSW AM+ GY Q G E+AV++F MQ+
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 172 -----YGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV-------SGLISFVTVSNAL 219
G+ P++ TL SV+S C ++ +L G + H A+ +G V N L
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQL 413
Query: 220 VSLYGKCGSIEDCHRLFSEMTFK--DEVSWTALVSAYSQFGKANETIRLFESMLTHG--L 275
+ +Y KC ++ +F ++ K D V+WT ++ YSQ G AN+ + L M
Sbjct: 414 IDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT 473
Query: 276 KPDKVTFIGVLSVCSRTRLVEKGNQIFE-SMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
+P+ T L C+ + G QI ++ + +P+ +C+ID++++ G + +A
Sbjct: 474 RPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDA 532
Query: 335 RDFINQMLFRDSV 347
R + M+ ++ V
Sbjct: 533 RLVFDNMMAKNEV 545
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 126/238 (52%), Gaps = 10/238 (4%)
Query: 116 SALVDMYCKCRSVKSAETVFKEM--SYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYG 173
S L+ Y + A ++ + S V W +++ YG NG + + + +F M
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLS 122
Query: 174 VVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCH 233
PD++T V +CG ++S+ G H ++LV+G IS V V NALV++Y +C S+ D
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDAR 182
Query: 234 RLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTH-GLKPDKVTFIGVLSVCSRT 292
++F EM+ D VSW +++ +Y++ GK + +F M G +PD +T + VL C+
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 293 RLVEKGNQIF-ESMTKEHGIIPIQDHY--SCIIDLFSRAGRLEEARDFINQMLFRDSV 347
G Q+ ++T E IQ+ + +C++D++++ G ++EA + M +D V
Sbjct: 243 GTHSLGKQLHCFAVTSEM----IQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVV 296
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 189/340 (55%), Gaps = 35/340 (10%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
E + +SW ++SG ++G H+EA+ +F+++ DQ T S+L + G L G
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 99 AHSYIIKTGFKDNIYAGSALVDMYCKCRSV------------------------------ 128
H Y+IK G + SA++DMY K V
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 129 --KSAET--VFKEMSYK-NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGS 183
K+ E +FKE + + NVVSWT+++ G QNG EA+++F +MQ GV P+ T+ S
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 184 VISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKD 243
++ +CGN+A+L G HG A+ L+ V V +AL+ +Y KCG I +F+ M K+
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 244 EVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFE 303
V W +L++ +S GKA E + +FES++ LKPD ++F +LS C + L ++G + F+
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 304 SMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLF 343
M++E+GI P +HYSC+++L RAG+L+EA D I +M F
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPF 553
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 140/239 (58%), Gaps = 6/239 (2%)
Query: 21 LGRLLMIEDSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETD 76
L R +++ + ++F +E+ + +SWTS+I+GC QNG EA+++FREM+ ++ +
Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPN 387
Query: 77 QYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK 136
T SML ACG + AL G H + ++ DN++ GSAL+DMY KC + ++ VF
Sbjct: 388 HVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFN 447
Query: 137 EMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE 196
M KN+V W +++ G+ +G ++E + IF + + + PD + S++S+CG + +E
Sbjct: 448 MMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDE 507
Query: 197 GAQ-FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSA 253
G + F ++ G+ + + +V+L G+ G +++ + L EM F+ D W AL+++
Sbjct: 508 GWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNS 566
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 154/374 (41%), Gaps = 71/374 (18%)
Query: 44 SWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYI 103
S++S+I T+ L ++I VF M S L D + ++ C + A + G Q H
Sbjct: 83 SFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVS 142
Query: 104 IKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK---------------------- 141
+G + + ++ MY +C + A VF MS K
Sbjct: 143 CVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVV 202
Query: 142 -------------NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSC 188
N+VSW +L G+ ++GY +EAV +F + G PD T+ SV+ S
Sbjct: 203 RILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSV 262
Query: 189 GNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT-------- 240
G+ L G HG + GL+ V +A++ +YGK G + LF++
Sbjct: 263 GDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCN 322
Query: 241 ---------------------FKDE------VSWTALVSAYSQFGKANETIRLFESMLTH 273
FK++ VSWT++++ +Q GK E + LF M
Sbjct: 323 AYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVA 382
Query: 274 GLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEE 333
G+KP+ VT +L C + G + H + + S +ID++++ GR+
Sbjct: 383 GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVG-SALIDMYAKCGRINL 441
Query: 334 ARDFINQMLFRDSV 347
++ N M ++ V
Sbjct: 442 SQIVFNMMPTKNLV 455
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 129/256 (50%), Gaps = 5/256 (1%)
Query: 98 QAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNG 157
QAH+ I+K+G +++ Y + L+ Y A+ V + + + S+++++ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 158 YSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSN 217
+++ +F M +G++PD L ++ C L++ + G Q H ++ VSGL V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 218 ALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKP 277
++ +Y +CG + D ++F M+ KD V+ +AL+ AY++ G E +R+ M + G++
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 278 DKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDF 337
+ V++ G+LS +R+ ++ +F+ + G P Q S ++ + L R
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKI-HHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 338 ----INQMLFRDSVLM 349
I Q L +D ++
Sbjct: 275 HGYVIKQGLLKDKCVI 290
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
D Y GR I S+ +F M ++ + W S+++G + +G +E + +F + L+
Sbjct: 431 DMYAKCGR---INLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP 487
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKT-GFKDNIYAGSALVDMYCKCRSVKSAETV 134
D +F S+L+ACG V EG + + + G K + S +V++ + ++ A +
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDL 547
Query: 135 FKEMSYK-NVVSWTAML 150
KEM ++ + W A+L
Sbjct: 548 IKEMPFEPDSCVWGALL 564
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 192/335 (57%), Gaps = 4/335 (1%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
+ Y+ G L+ ++R++F +M +R +W +MI+G Q + E + +FREM
Sbjct: 33 NGYVRAGDLV---NARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSP 89
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
D+YT GS+ + G+ ++ G Q H Y IK G + ++ S+L MY + ++ E V
Sbjct: 90 DEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVI 149
Query: 136 KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE 195
+ M +N+V+W +++G QNG E + ++ M+ G P+ T +V+SSC +LA
Sbjct: 150 RSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRG 209
Query: 196 EGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYS 255
+G Q H A+ G S V V ++L+S+Y KCG + D + FSE +DEV W++++SAY
Sbjct: 210 QGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYG 269
Query: 256 QFGKANETIRLFESMLTH-GLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPI 314
G+ +E I LF +M ++ ++V F+ +L CS + L +KG ++F+ M +++G P
Sbjct: 270 FHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPG 329
Query: 315 QDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLM 349
HY+C++DL RAG L++A I M + +++
Sbjct: 330 LKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVI 364
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 123/240 (51%), Gaps = 1/240 (0%)
Query: 109 KDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCD 168
K N + + L++ Y + + +A VF EM + + +W AM+ G Q ++EE + +F +
Sbjct: 22 KKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFRE 81
Query: 169 MQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGS 228
M G PD++TLGSV S L S+ G Q HG + GL + V+++L +Y + G
Sbjct: 82 MHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGK 141
Query: 229 IEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSV 288
++D + M ++ V+W L+ +Q G + L++ M G +P+K+TF+ VLS
Sbjct: 142 LQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSS 201
Query: 289 CSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVL 348
CS + +G QI K G + S +I ++S+ G L +A ++ D V+
Sbjct: 202 CSDLAIRGQGQQIHAEAIKI-GASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVM 260
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 144/303 (47%), Gaps = 14/303 (4%)
Query: 18 YLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQ 77
Y+ G+L +D + M R+ ++W ++I G QNG + +++ M+ ++
Sbjct: 136 YMRNGKL---QDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNK 192
Query: 78 YTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE 137
TF ++L++C + +G Q H+ IK G + S+L+ MY KC + A F E
Sbjct: 193 ITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE 252
Query: 138 MSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDM-QKYGVVPDDFTLGSVISSCGNLASLEE 196
++ V W++M+ YG +G +EA+++F M ++ + ++ +++ +C + ++
Sbjct: 253 REDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDK 312
Query: 197 GAQ-FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAY 254
G + F + G + +V L G+ G ++ + M K D V W L+SA
Sbjct: 313 GLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSAC 372
Query: 255 SQFGKANETIRLFESMLTHGLKP-DKVTFIGVLSVCSRTRLVEKGNQIFESM-----TKE 308
+ A R+F+ +L + P D ++ + +V + + +++ +SM KE
Sbjct: 373 NIHKNAEMAQRVFKEILQ--IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKE 430
Query: 309 HGI 311
GI
Sbjct: 431 AGI 433
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/327 (36%), Positives = 190/327 (58%), Gaps = 5/327 (1%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
+I+D+R++F + E +S ++I+G +QN L EA+ +F+EM + + + TF +++
Sbjct: 579 IIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVE 637
Query: 86 ACGGVMALQEGNQAHSYIIKTGFK-DNIYAGSALVDMYCKCRSVKSAETVFKEMS-YKNV 143
AC +L G Q H I K GF + Y G +L+ MY R + A +F E+S K++
Sbjct: 638 ACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSI 697
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGI 203
V WT M+ G+ QNG+ EEA+K + +M+ GV+PD T +V+ C L+SL EG H +
Sbjct: 698 VLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSL 757
Query: 204 ALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEV-SWTALVSAYSQFGKANE 262
SN L+ +Y KCG ++ ++F EM + V SW +L++ Y++ G A +
Sbjct: 758 IFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAED 817
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
+++F+SM + PD++TF+GVL+ CS V G +IFE M ++GI DH +C++
Sbjct: 818 ALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMV 877
Query: 323 DLFSRAGRLEEARDFIN-QMLFRDSVL 348
DL R G L+EA DFI Q L D+ L
Sbjct: 878 DLLGRWGYLQEADDFIEAQNLKPDARL 904
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 180/326 (55%), Gaps = 4/326 (1%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
++Y+ LG+L +D+R LF +M D ++W MISG + G AI+ F MR +++
Sbjct: 269 NTYIRLGKL---KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKS 325
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
+ T GS+L+A G V L G H+ IK G NIY GS+LV MY KC +++A VF
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 136 KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE 195
+ + KN V W AM+ GY NG S + +++F DM+ G DDFT S++S+C LE
Sbjct: 386 EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445
Query: 196 EGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYS 255
G+QFH I + L + V NALV +Y KCG++ED ++F M +D V+W ++ +Y
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 256 QFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ 315
Q +E LF+ M G+ D L C+ + +G Q+ ++ + G+
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV-HCLSVKCGLDRDL 564
Query: 316 DHYSCIIDLFSRAGRLEEARDFINQM 341
S +ID++S+ G +++AR + +
Sbjct: 565 HTGSSLIDMYSKCGIIKDARKVFSSL 590
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 155/281 (55%), Gaps = 1/281 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E + ++F + E++ + W +MI G NG + +++F +M+S D +TF S+L+
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C L+ G+Q HS IIK N++ G+ALVDMY KC +++ A +F+ M ++ V+W
Sbjct: 438 CAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTW 497
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
++ Y Q+ EA +F M G+V D L S + +C ++ L +G Q H +++
Sbjct: 498 NTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK 557
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
GL + ++L+ +Y KCG I+D ++FS + VS AL++ YSQ E + L
Sbjct: 558 CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVL 616
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK 307
F+ MLT G+ P ++TF ++ C + + G Q +TK
Sbjct: 617 FQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITK 657
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 162/321 (50%), Gaps = 36/321 (11%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I D+R++F + + +++ WT + SG + GL EA+ VF MR E D F
Sbjct: 211 ISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAF------ 264
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
+++ Y + +K A +F EMS +VV+W
Sbjct: 265 -----------------------------VTVINTYIRLGKLKDARLLFGEMSSPDVVAW 295
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
M+ G+G+ G A++ F +M+K V TLGSV+S+ G +A+L+ G H A+
Sbjct: 296 NVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIK 355
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
GL S + V ++LVS+Y KC +E ++F + K++V W A++ Y+ G++++ + L
Sbjct: 356 LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMEL 415
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
F M + G D TF +LS C+ + +E G+Q F S+ + + + ++D+++
Sbjct: 416 FMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYA 474
Query: 327 RAGRLEEARDFINQMLFRDSV 347
+ G LE+AR +M RD+V
Sbjct: 475 KCGALEDARQIFERMCDRDNV 495
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 1/217 (0%)
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
+AL+ G HS + G G+A+VD+Y KC V AE F + K+V +W +M
Sbjct: 73 ALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSM 131
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
L Y G + ++ F + + + P+ FT V+S+C ++E G Q H + GL
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFES 269
ALV +Y KC I D R+F + + V WT L S Y + G E + +FE
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 270 MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMT 306
M G +PD + F+ V++ R ++ +F M+
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS 288
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 112/253 (44%), Gaps = 35/253 (13%)
Query: 36 DMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQE 95
D E+D +W SM+S + G + + F + + +++TF +L+ C ++
Sbjct: 119 DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEF 178
Query: 96 GNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQ 155
G Q H +IK G + N Y G ALVDMY KC + A VF+ + N V WT + GY +
Sbjct: 179 GRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVK 238
Query: 156 NGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTV 215
G EEAV +F M+ G PD ++FVTV
Sbjct: 239 AGLPEEAVLVFERMRDEGHRPDH-------------------------------LAFVTV 267
Query: 216 SNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGL 275
N + L G ++D LF EM+ D V+W ++S + + G I F +M +
Sbjct: 268 INTYIRL----GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSV 323
Query: 276 KPDKVTFIGVLSV 288
K + T VLS
Sbjct: 324 KSTRSTLGSVLSA 336
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 191/322 (59%), Gaps = 5/322 (1%)
Query: 27 IEDSRQLFCDMR-ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
I ++ LF M E+++++WTSM++G +QNG +AI+ FR++R E +++QYTF S+LT
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLT 235
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
AC V A + G Q H I+K+GFK NIY SAL+DMY KCR ++SA + + M +VVS
Sbjct: 236 ACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVS 295
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE--GAQFHGI 203
W +M+VG + G EA+ +F M + + DDFT+ S++ +C L+ E + H +
Sbjct: 296 WNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL-NCFALSRTEMKIASSAHCL 354
Query: 204 ALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANET 263
+ +G ++ V+NALV +Y K G ++ ++F M KD +SWTALV+ + G +E
Sbjct: 355 IVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEA 414
Query: 264 IRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIID 323
++LF +M G+ PDK+ VLS + L+E G Q+ + K G + ++
Sbjct: 415 LKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKS-GFPSSLSVNNSLVT 473
Query: 324 LFSRAGRLEEARDFINQMLFRD 345
++++ G LE+A N M RD
Sbjct: 474 MYTKCGSLEDANVIFNSMEIRD 495
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 166/316 (52%), Gaps = 36/316 (11%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E +R L M D +SW SMI GC + GL EA+ +F M ++ D +T S+L
Sbjct: 278 MESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNC 337
Query: 87 CG-GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
++ + AH I+KTG+ +ALVDMY K + SA VF+ M K+V+S
Sbjct: 338 FALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVIS 397
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
WTA++ G NG +EA+K+FC+M+ G+ PD SV+S+ L LE G Q HG +
Sbjct: 398 WTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYI 457
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
SG S ++V+N+LV++Y KCGS+ED + +F+ M +D ++WT L+ Y++ G + R
Sbjct: 458 KSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQR 517
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
F+SM T +GI P +HY+C+IDLF
Sbjct: 518 YFDSMRT-----------------------------------VYGITPGPEHYACMIDLF 542
Query: 326 SRAGRLEEARDFINQM 341
R+G + ++QM
Sbjct: 543 GRSGDFVKVEQLLHQM 558
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 176/322 (54%), Gaps = 1/322 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ D+ +LF +++ISW ++ISG ++G EA ++F EM+S+ ++ ++YT GS+L
Sbjct: 75 LSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRM 134
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS-YKNVVS 145
C ++ L G Q H + IKTGF ++ + L+ MY +C+ + AE +F+ M KN V+
Sbjct: 135 CTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVT 194
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
WT+ML GY QNG++ +A++ F D+++ G + +T SV+++C ++++ G Q H +
Sbjct: 195 WTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIV 254
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
SG + + V +AL+ +Y KC +E L M D VSW +++ + G E +
Sbjct: 255 KSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALS 314
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
+F M +K D T +L+ + +R K + + G + + ++D++
Sbjct: 315 MFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMY 374
Query: 326 SRAGRLEEARDFINQMLFRDSV 347
++ G ++ A M+ +D +
Sbjct: 375 AKRGIMDSALKVFEGMIEKDVI 396
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 137/289 (47%), Gaps = 41/289 (14%)
Query: 62 IDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDM 121
+D R+M +M E D++T+ +M+ A
Sbjct: 44 VDEARQMFDKMPERDEFTWNTMIVA----------------------------------- 68
Query: 122 YCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTL 181
Y R + AE +F+ KN +SW A++ GY ++G EA +F +MQ G+ P+++TL
Sbjct: 69 YSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTL 128
Query: 182 GSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF 241
GSV+ C +L L G Q HG + +G V V N L+++Y +C I + LF M
Sbjct: 129 GSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG 188
Query: 242 -KDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQ 300
K+ V+WT++++ YSQ G A + I F + G + ++ TF VL+ C+ G Q
Sbjct: 189 EKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQ 248
Query: 301 IFESMTKE--HGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ + K I +Q S +ID++++ +E AR + M D V
Sbjct: 249 VHCCIVKSGFKTNIYVQ---SALIDMYAKCREMESARALLEGMEVDDVV 294
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 132/258 (51%), Gaps = 9/258 (3%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
+++ + ++F M E+D ISWT++++G T NG + EA+ +F MR + D+ S+L+
Sbjct: 379 IMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLS 438
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
A + L+ G Q H IK+GF ++ ++LV MY KC S++ A +F M +++++
Sbjct: 439 ASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLIT 498
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQK-YGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGI 203
WT ++VGY +NG E+A + F M+ YG+ P +I G + Q H +
Sbjct: 499 WTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQM 558
Query: 204 ALVSGLISFVTVSNALVSLYGKCGSIEDCHR---LFSEMTFKDEVSWTALVSAYSQFGKA 260
+ TV A+++ K G+IE+ R E+ + V + L + YS G+
Sbjct: 559 EVEPD----ATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQ 614
Query: 261 NETIRLFESMLTHGLKPD 278
+E + M + + +
Sbjct: 615 DEAANVRRLMKSRNISKE 632
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 186/326 (57%), Gaps = 15/326 (4%)
Query: 23 RLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGS 82
R + E ++ F M +D+ SW +MI+G + G +A RE+ M+E ++ ++ +
Sbjct: 136 RNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKA----RELFYSMMEKNEVSWNA 191
Query: 83 MLTA---CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS 139
M++ CG + + S+ K + A +A++ Y K + V+ AE +FK+M+
Sbjct: 192 MISGYIECGDL-------EKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMT 244
Query: 140 Y-KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGA 198
KN+V+W AM+ GY +N E+ +K+F M + G+ P+ L S + C L++L+ G
Sbjct: 245 VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGR 304
Query: 199 QFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFG 258
Q H I S L + VT +L+S+Y KCG + D +LF M KD V+W A++S Y+Q G
Sbjct: 305 QIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHG 364
Query: 259 KANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY 318
A++ + LF M+ + ++PD +TF+ VL C+ LV G FESM +++ + P DHY
Sbjct: 365 NADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY 424
Query: 319 SCIIDLFSRAGRLEEARDFINQMLFR 344
+C++DL RAG+LEEA I M FR
Sbjct: 425 TCMVDLLGRAGKLEEALKLIRSMPFR 450
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 148/323 (45%), Gaps = 50/323 (15%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHR-EAIDVFREMRSEMLETDQYTFGSMLT 85
I+ + ++F MR +++I+W S++ G +++ EA +F E+ E D +++ ML+
Sbjct: 77 IDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLF----DEIPEPDTFSYNIMLS 132
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
Y + + + A++ F M +K+ S
Sbjct: 133 C-----------------------------------YVRNVNFEKAQSFFDRMPFKDAAS 157
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W M+ GY + G E+A ++F M + V + + I CG+ LE+ + F +A
Sbjct: 158 WNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYI-ECGD---LEKASHFFKVAP 213
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF-KDEVSWTALVSAYSQFGKANETI 264
V G++++ A+++ Y K +E +F +MT K+ V+W A++S Y + + + +
Sbjct: 214 VRGVVAWT----AMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGL 269
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
+LF +ML G++P+ L CS ++ G QI + ++K + + +I +
Sbjct: 270 KLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTA-LTSLISM 328
Query: 325 FSRAGRLEEARDFINQMLFRDSV 347
+ + G L +A M +D V
Sbjct: 329 YCKCGELGDAWKLFEVMKKKDVV 351
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 105/242 (43%), Gaps = 17/242 (7%)
Query: 102 YIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYS-E 160
Y+ K +D I+ + ++ + + A VF M KN ++W ++L+G ++
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM 110
Query: 161 EAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALV 220
EA ++F ++ + PD F+ ++S + E+ F S+ N ++
Sbjct: 111 EAHQLFDEIPE----PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASW----NTMI 162
Query: 221 SLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKV 280
+ Y + G +E LF M K+EVSW A++S Y + G + F+ G+ V
Sbjct: 163 TGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGV----V 218
Query: 281 TFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQ 340
+ +++ + + VE +F+ MT ++ ++ +I + R E+
Sbjct: 219 AWTAMITGYMKAKKVELAEAMFKDMTVNKNLVT----WNAMISGYVENSRPEDGLKLFRA 274
Query: 341 ML 342
ML
Sbjct: 275 ML 276
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 190/356 (53%), Gaps = 36/356 (10%)
Query: 18 YLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEM-LETD 76
Y LG+ IE + ++F +M +RD +SW +IS NG +AI VF+ M E L+ D
Sbjct: 91 YASLGK---IEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFD 147
Query: 77 QYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK 136
+ T S L+AC + L+ G + + +++ T F+ ++ G+ALVDM+CKC + A VF
Sbjct: 148 EGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFD 206
Query: 137 EMSYKNVVSWTAMLVGYGQ--------------------------NGYSE-----EAVKI 165
M KNV WT+M+ GY NGY + EA+++
Sbjct: 207 SMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALEL 266
Query: 166 FCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGK 225
F MQ G+ PD+F L S+++ C +LE+G HG + + V ALV +Y K
Sbjct: 267 FRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAK 326
Query: 226 CGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGV 285
CG IE +F E+ +D SWT+L+ + G + + L+ M G++ D +TF+ V
Sbjct: 327 CGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAV 386
Query: 286 LSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
L+ C+ V +G +IF SMT+ H + P +H SC+IDL RAG L+EA + I++M
Sbjct: 387 LTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 160/334 (47%), Gaps = 34/334 (10%)
Query: 45 WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYII 104
+ M+ + + +F E+R + L D +T +L + G + + EG + H Y +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVK 164
K G + + Y ++L+ MY ++ VF EM ++VVSW ++ Y NG E+A+
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 165 IFCDM-QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLY 223
+F M Q+ + D+ T+ S +S+C L +LE G + + + +S V + NALV ++
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMS-VRIGNALVDMF 192
Query: 224 GKC-------------------------------GSIEDCHRLFSEMTFKDEVSWTALVS 252
KC G I++ LF KD V WTA+++
Sbjct: 193 CKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMN 252
Query: 253 AYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGII 312
Y QF + +E + LF M T G++PD + +L+ C++T +E+G I E+ +
Sbjct: 253 GYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWI-HGYINENRVT 311
Query: 313 PIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDS 346
+ + ++D++++ G +E A + ++ RD+
Sbjct: 312 VDKVVGTALVDMYAKCGCIETALEVFYEIKERDT 345
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 133/258 (51%), Gaps = 8/258 (3%)
Query: 18 YLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQ 77
Y+ GR I+++R LF +D + WT+M++G Q EA+++FR M++ + D
Sbjct: 223 YVSTGR---IDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDN 279
Query: 78 YTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE 137
+ S+LT C AL++G H YI + + G+ALVDMY KC +++A VF E
Sbjct: 280 FVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYE 339
Query: 138 MSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG 197
+ ++ SWT+++ G NG S A+ ++ +M+ GV D T +V+++C + + EG
Sbjct: 340 IKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEG 399
Query: 198 AQ-FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS----WTALVS 252
+ FH + + + L+ L + G +++ L +M + + + + +L+S
Sbjct: 400 RKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLS 459
Query: 253 AYSQFGKANETIRLFESM 270
A +G R+ E +
Sbjct: 460 AARNYGNVKIAERVAEKL 477
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 211 bits (538), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 184/330 (55%), Gaps = 3/330 (0%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
G++ + +SR++ M RD ++W ++I G ++ +A+ F+ MR E + ++ T
Sbjct: 408 GKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVV 467
Query: 82 SMLTAC--GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS 139
S+L+AC G + L+ G H+YI+ GF+ + + ++L+ MY KC + S++ +F +
Sbjct: 468 SVLSACLLPGDL-LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 526
Query: 140 YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ 199
+N+++W AML +G+ EE +K+ M+ +GV D F+ +S+ LA LEEG Q
Sbjct: 527 NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 586
Query: 200 FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
HG+A+ G + NA +Y KCG I + ++ + SW L+SA + G
Sbjct: 587 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 646
Query: 260 ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYS 319
E F ML G+KP VTF+ +L+ CS LV+KG ++ + ++ G+ P +H
Sbjct: 647 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 706
Query: 320 CIIDLFSRAGRLEEARDFINQMLFRDSVLM 349
C+IDL R+GRL EA FI++M + + L+
Sbjct: 707 CVIDLLGRSGRLAEAETFISKMPMKPNDLV 736
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 179/336 (53%), Gaps = 19/336 (5%)
Query: 18 YLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQ 77
Y GR ++ +R LF M R+ +SW +M+SG + GL+ E ++ FR+M ++
Sbjct: 2 YTKFGR---VKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSS 58
Query: 78 YTFGSMLTACG--GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
+ S++TACG G M +EG Q H ++ K+G ++Y +A++ +Y V + VF
Sbjct: 59 FVIASLVTACGRSGSM-FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 136 KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE 195
+EM +NVVSWT+++VGY G EE + I+ M+ GV ++ ++ VISSCG L
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES 177
Query: 196 EGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYS 255
G Q G + SGL S + V N+L+S+ G G+++ + +F +M+ +D +SW ++ +AY+
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 256 QFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ 315
Q G E+ R+F M + + T +LSV + G I HG++
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI-------HGLVVKM 290
Query: 316 --DHYSCI----IDLFSRAGRLEEARDFINQMLFRD 345
D C+ + +++ AGR EA QM +D
Sbjct: 291 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKD 326
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 166/327 (50%), Gaps = 2/327 (0%)
Query: 20 VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYT 79
+LG + ++ + +F M ERD+ISW S+ + QNG E+ +F MR E + T
Sbjct: 204 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 263
Query: 80 FGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS 139
++L+ G V + G H ++K GF + + L+ MY A VFK+M
Sbjct: 264 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 323
Query: 140 YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ 199
K+++SW +++ + +G S +A+ + C M G + T S +++C E+G
Sbjct: 324 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 383
Query: 200 FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
HG+ +VSGL + NALVS+YGK G + + R+ +M +D V+W AL+ Y++
Sbjct: 384 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 443
Query: 260 ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRT-RLVEKGNQIFESMTKEHGIIPIQDHY 318
++ + F++M G+ + +T + VLS C L+E+G + + G +
Sbjct: 444 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVK 502
Query: 319 SCIIDLFSRAGRLEEARDFINQMLFRD 345
+ +I ++++ G L ++D N + R+
Sbjct: 503 NSLITMYAKCGDLSSSQDLFNGLDNRN 529
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 171/318 (53%), Gaps = 1/318 (0%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
SR++F +M +R+ +SWTS++ G + G E ID+++ MR E + ++ + ++++CG
Sbjct: 113 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGL 172
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
+ G Q ++K+G + + ++L+ M +V A +F +MS ++ +SW ++
Sbjct: 173 LKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSI 232
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
Y QNG+ EE+ +IF M+++ + T+ +++S G++ + G HG+ + G
Sbjct: 233 AAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF 292
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFES 269
S V V N L+ +Y G + + +F +M KD +SW +L++++ G++ + + L S
Sbjct: 293 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 352
Query: 270 MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAG 329
M++ G + VTF L+ C EKG +I + G+ Q + ++ ++ + G
Sbjct: 353 MISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIG 411
Query: 330 RLEEARDFINQMLFRDSV 347
+ E+R + QM RD V
Sbjct: 412 EMSESRRVLLQMPRRDVV 429
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 115/228 (50%), Gaps = 2/228 (0%)
Query: 121 MYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFT 180
MY K VK A +F M +N VSW M+ G + G E ++ F M G+ P F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 181 LGSVISSCGNLASL-EEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEM 239
+ S++++CG S+ EG Q HG SGL+S V VS A++ LYG G + ++F EM
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 240 TFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGN 299
++ VSWT+L+ YS G+ E I +++ M G+ ++ + V+S C + G
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 300 QIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
QI + K G+ + +I + G ++ A +QM RD++
Sbjct: 181 QIIGQVVKS-GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 227
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 211 bits (538), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 184/330 (55%), Gaps = 3/330 (0%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
G++ + +SR++ M RD ++W ++I G ++ +A+ F+ MR E + ++ T
Sbjct: 391 GKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVV 450
Query: 82 SMLTAC--GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS 139
S+L+AC G + L+ G H+YI+ GF+ + + ++L+ MY KC + S++ +F +
Sbjct: 451 SVLSACLLPGDL-LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 509
Query: 140 YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ 199
+N+++W AML +G+ EE +K+ M+ +GV D F+ +S+ LA LEEG Q
Sbjct: 510 NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 569
Query: 200 FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
HG+A+ G + NA +Y KCG I + ++ + SW L+SA + G
Sbjct: 570 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 629
Query: 260 ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYS 319
E F ML G+KP VTF+ +L+ CS LV+KG ++ + ++ G+ P +H
Sbjct: 630 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 689
Query: 320 CIIDLFSRAGRLEEARDFINQMLFRDSVLM 349
C+IDL R+GRL EA FI++M + + L+
Sbjct: 690 CVIDLLGRSGRLAEAETFISKMPMKPNDLV 719
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 170/317 (53%), Gaps = 16/317 (5%)
Query: 37 MRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACG--GVMALQ 94
M R+ +SW +M+SG + GL+ E ++ FR+M ++ + S++TACG G M +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSM-FR 59
Query: 95 EGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYG 154
EG Q H ++ K+G ++Y +A++ +Y V + VF+EM +NVVSWT+++VGY
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 155 QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT 214
G EE + I+ M+ GV ++ ++ VISSCG L G Q G + SGL S +
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
V N+L+S+ G G+++ + +F +M+ +D +SW ++ +AY+Q G E+ R+F M
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239
Query: 275 LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ--DHYSCI----IDLFSRA 328
+ + T +LSV + G I HG++ D C+ + +++ A
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRGI-------HGLVVKMGFDSVVCVCNTLLRMYAGA 292
Query: 329 GRLEEARDFINQMLFRD 345
GR EA QM +D
Sbjct: 293 GRSVEANLVFKQMPTKD 309
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 166/327 (50%), Gaps = 2/327 (0%)
Query: 20 VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYT 79
+LG + ++ + +F M ERD+ISW S+ + QNG E+ +F MR E + T
Sbjct: 187 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 246
Query: 80 FGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS 139
++L+ G V + G H ++K GF + + L+ MY A VFK+M
Sbjct: 247 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 306
Query: 140 YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ 199
K+++SW +++ + +G S +A+ + C M G + T S +++C E+G
Sbjct: 307 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 366
Query: 200 FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
HG+ +VSGL + NALVS+YGK G + + R+ +M +D V+W AL+ Y++
Sbjct: 367 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 426
Query: 260 ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRT-RLVEKGNQIFESMTKEHGIIPIQDHY 318
++ + F++M G+ + +T + VLS C L+E+G + + G +
Sbjct: 427 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVK 485
Query: 319 SCIIDLFSRAGRLEEARDFINQMLFRD 345
+ +I ++++ G L ++D N + R+
Sbjct: 486 NSLITMYAKCGDLSSSQDLFNGLDNRN 512
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 171/318 (53%), Gaps = 1/318 (0%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
SR++F +M +R+ +SWTS++ G + G E ID+++ MR E + ++ + ++++CG
Sbjct: 96 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGL 155
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
+ G Q ++K+G + + ++L+ M +V A +F +MS ++ +SW ++
Sbjct: 156 LKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSI 215
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
Y QNG+ EE+ +IF M+++ + T+ +++S G++ + G HG+ + G
Sbjct: 216 AAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF 275
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFES 269
S V V N L+ +Y G + + +F +M KD +SW +L++++ G++ + + L S
Sbjct: 276 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 335
Query: 270 MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAG 329
M++ G + VTF L+ C EKG +I + G+ Q + ++ ++ + G
Sbjct: 336 MISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIG 394
Query: 330 RLEEARDFINQMLFRDSV 347
+ E+R + QM RD V
Sbjct: 395 EMSESRRVLLQMPRRDVV 412
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 189/343 (55%), Gaps = 10/343 (2%)
Query: 15 WDS----YLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRS 70
W+S YL G+ ++D+ +LF M ++ ISWT+MI G QN EA+D+F+ M
Sbjct: 162 WNSMVHGYLQFGK---VDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLR 218
Query: 71 EMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKS 130
+++ F ++TAC A G Q H IIK GF Y ++L+ Y C+ +
Sbjct: 219 CCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGD 278
Query: 131 AETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGN 190
+ VF E ++ V WTA+L GY N E+A+ IF M + ++P+ T S ++SC
Sbjct: 279 SRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSA 338
Query: 191 LASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTAL 250
L +L+ G + HG+A+ GL + V N+LV +Y G++ D +F ++ K VSW ++
Sbjct: 339 LGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSI 398
Query: 251 VSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK--E 308
+ +Q G+ +F M+ +PD++TF G+LS CS +EKG ++F M+
Sbjct: 399 IVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGIN 458
Query: 309 HGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLMQL 351
H IQ HY+C++D+ R G+L+EA + I +M+ + + ++ L
Sbjct: 459 HIDRKIQ-HYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWL 500
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 137/275 (49%), Gaps = 12/275 (4%)
Query: 29 DSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACG 88
D+ LF +M RD +SW SMISGC + G A+ +F EM E ++ +M+ C
Sbjct: 84 DALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLF----DEMPERSVVSWTAMVNGC- 138
Query: 89 GVMALQEG--NQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
+ G +QA + KD A +++V Y + V A +FK+M KNV+SW
Sbjct: 139 ----FRSGKVDQAERLFYQMPVKDTA-AWNSMVHGYLQFGKVDDALKLFKQMPGKNVISW 193
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
T M+ G QN S EA+ +F +M + + VI++C N + G Q HG+ +
Sbjct: 194 TTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIK 253
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
G + VS +L++ Y C I D ++F E + WTAL+S YS K + + +
Sbjct: 254 LGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSI 313
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQI 301
F ML + + P++ TF L+ CS ++ G ++
Sbjct: 314 FSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEM 348
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 110/231 (47%), Gaps = 21/231 (9%)
Query: 116 SALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV 175
+ ++ Y + + A +F EM ++VVSW +M+ G + G AVK+F +M + VV
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVV 129
Query: 176 PDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRL 235
+ ++++ C +++ + V ++ N++V Y + G ++D +L
Sbjct: 130 ----SWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAW----NSMVHGYLQFGKVDDALKL 181
Query: 236 FSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLV 295
F +M K+ +SWT ++ Q ++ E + LF++ML +K F V++ C+
Sbjct: 182 FKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAF 241
Query: 296 EKGNQIFESMTKEHGIIP----IQDHY--SCIIDLFSRAGRLEEARDFINQ 340
G Q+ HG+I + + Y + +I ++ R+ ++R ++
Sbjct: 242 HMGIQV-------HGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDE 285
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 213 VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLT 272
V++ +++ Y + + D LF EM +D VSW +++S + G N ++LF+ M
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM-- 123
Query: 273 HGLKPDK--VTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQD--HYSCIIDLFSRA 328
P++ V++ +++ C R+ V++ ++F M P++D ++ ++ + +
Sbjct: 124 ----PERSVVSWTAMVNGCFRSGKVDQAERLFYQM-------PVKDTAAWNSMVHGYLQF 172
Query: 329 GRLEEARDFINQM 341
G++++A QM
Sbjct: 173 GKVDDALKLFKQM 185
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 173/325 (53%), Gaps = 9/325 (2%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
++F D+ + + ++W S+ISG N +AI+ FREM+S ++ ++ +L ACG
Sbjct: 163 RVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCK 222
Query: 92 ALQEGNQAHSYIIKTGFKD--------NIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV 143
+ G H ++ GF N+ ++L+DMY KC +++A +F M + +
Sbjct: 223 DIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTL 282
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGI 203
VSW +++ GY QNG +EEA+ +F DM G+ PD T SVI + + G H
Sbjct: 283 VSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAY 342
Query: 204 ALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANET 263
+G + + ALV++Y K G E + F ++ KD ++WT ++ + G NE
Sbjct: 343 VSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEA 402
Query: 264 IRLFESMLTHG-LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
+ +F+ M G PD +T++GVL CS LVE+G + F M HG+ P +HY C++
Sbjct: 403 LSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMV 462
Query: 323 DLFSRAGRLEEARDFINQMLFRDSV 347
D+ SRAGR EEA + M + +V
Sbjct: 463 DILSRAGRFEEAERLVKTMPVKPNV 487
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 165/319 (51%), Gaps = 15/319 (4%)
Query: 45 WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYII 104
W SMI G + + +A+ ++EM + D +TF +L AC G+ +Q G+ H +++
Sbjct: 75 WNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVV 134
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVK 164
KTGF+ N+Y + L+ MY C V VF+++ NVV+W +++ G+ N +A++
Sbjct: 135 KTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIE 194
Query: 165 IFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISF--------VTVS 216
F +MQ GV ++ + ++ +CG + G FHG G + V ++
Sbjct: 195 AFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILA 254
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLK 276
+L+ +Y KCG + LF M + VSW ++++ YSQ G A E + +F ML G+
Sbjct: 255 TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA 314
Query: 277 PDKVTFIGVLSVCSRTRLVEKGNQIFESM---TKEHGIIPIQDHYSCIIDLFSRAGRLEE 333
PDKVTF+ V+ R +++ +Q+ +S+ + G + +++++++ G E
Sbjct: 315 PDKVTFLSVI----RASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAES 370
Query: 334 ARDFINQMLFRDSVLMQLV 352
A+ + +D++ +V
Sbjct: 371 AKKAFEDLEKKDTIAWTVV 389
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 122/230 (53%), Gaps = 3/230 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ +R LF M ER +SW S+I+G +QNG EA+ +F +M + D+ TF S++ A
Sbjct: 267 LRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRA 326
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
Q G H+Y+ KTGF + ALV+MY K +SA+ F+++ K+ ++W
Sbjct: 327 SMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAW 386
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYG-VVPDDFTLGSVISSCGNLASLEEGAQ-FHGIA 204
T +++G +G+ EA+ IF MQ+ G PD T V+ +C ++ +EEG + F +
Sbjct: 387 TVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMR 446
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSA 253
+ GL V +V + + G E+ RL M K V+ W AL++
Sbjct: 447 DLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 132/279 (47%), Gaps = 12/279 (4%)
Query: 80 FGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCR---SVKSAETVFK 136
+ +L+ +L E NQ H +IK+ N+ S L+D C ++ A +VF+
Sbjct: 6 YKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFE 65
Query: 137 EMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE 196
+ +V W +M+ GY + ++A+ + +M + G PD FT V+ +C L ++
Sbjct: 66 SIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQF 125
Query: 197 GAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQ 256
G+ HG + +G + VS L+ +Y CG + R+F ++ + V+W +L+S +
Sbjct: 126 GSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVN 185
Query: 257 FGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIP-IQ 315
+ ++ I F M ++G+K ++ + +L C R + + G + F + G P Q
Sbjct: 186 NNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTG-KWFHGFLQGLGFDPYFQ 244
Query: 316 DHY-------SCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ +ID++++ G L AR + M R V
Sbjct: 245 SKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLV 283
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 186/325 (57%), Gaps = 1/325 (0%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM-RSEMLETDQYTFGSML 84
++E++R+LF +M E+DS SWT+M++G + EA+ ++ M R + +T +
Sbjct: 166 LLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAV 225
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV 144
A V ++ G + H +I++ G + S+L+DMY KC + A +F ++ K+VV
Sbjct: 226 AAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV 285
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
SWT+M+ Y ++ E +F ++ P+++T V+++C +L + E G Q HG
Sbjct: 286 SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM 345
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
G + S++LV +Y KCG+IE + D VSWT+L+ +Q G+ +E +
Sbjct: 346 TRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEAL 405
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
+ F+ +L G KPD VTF+ VLS C+ LVEKG + F S+T++H + DHY+C++DL
Sbjct: 406 KYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDL 465
Query: 325 FSRAGRLEEARDFINQMLFRDSVLM 349
+R+GR E+ + I++M + S +
Sbjct: 466 LARSGRFEQLKSVISEMPMKPSKFL 490
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 156/320 (48%), Gaps = 38/320 (11%)
Query: 52 CTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDN 111
C Q L REA+ + + + T+ +++ C AL+EG + H +I +GF
Sbjct: 65 CGQK-LLREAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPG 119
Query: 112 IYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQK 171
I + L+ MY KC S+ A VF EM +++ SW M+ GY + G EEA K+F +M +
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 172 -------------------------YGVV-------PDDFTLGSVISSCGNLASLEEGAQ 199
Y ++ P+ FT+ +++ + + G +
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 200 FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
HG + +GL S + ++L+ +YGKCG I++ +F ++ KD VSWT+++ Y + +
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR 299
Query: 260 ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYS 319
E LF ++ +P++ TF GVL+ C+ E G Q+ MT+ G P S
Sbjct: 300 WREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASS 358
Query: 320 CIIDLFSRAGRLEEARDFIN 339
++D++++ G +E A+ ++
Sbjct: 359 SLVDMYTKCGNIESAKHVVD 378
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 129/247 (52%), Gaps = 3/247 (1%)
Query: 15 WDSYL-VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEML 73
W S + + G+ I+++R +F + E+D +SWTSMI ++ RE +F E+
Sbjct: 256 WSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCE 315
Query: 74 ETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAET 133
++YTF +L AC + + G Q H Y+ + GF +A S+LVDMY KC +++SA+
Sbjct: 316 RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKH 375
Query: 134 VFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLAS 193
V ++VSWT+++ G QNG +EA+K F + K G PD T +V+S+C +
Sbjct: 376 VVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGL 435
Query: 194 LEEGAQ-FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKD-EVSWTALV 251
+E+G + F+ I L LV L + G E + SEM K + W +++
Sbjct: 436 VEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVL 495
Query: 252 SAYSQFG 258
S +G
Sbjct: 496 GGCSTYG 502
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 103/219 (47%), Gaps = 37/219 (16%)
Query: 161 EAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALV 220
EAV++ +K P T ++I C +LEEG + H SG + + + N L+
Sbjct: 72 EAVQLLGRAKK----PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLL 127
Query: 221 SLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE-----------S 269
+Y KCGS+ D ++F EM +D SW +V+ Y++ G E +LF+ +
Sbjct: 128 RMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTA 187
Query: 270 MLTHGLKPDKVTFIGVL-SVCSRT--------------------RLVEKGNQIFESMTKE 308
M+T +K D+ VL S+ R + + +G +I + +
Sbjct: 188 MVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRA 247
Query: 309 HGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
G+ + +S ++D++ + G ++EAR+ ++++ +D V
Sbjct: 248 -GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV 285
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 190/331 (57%), Gaps = 5/331 (1%)
Query: 18 YLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVF-REMRSEM-LET 75
YL LG + E +LF +M ERD +SW S+ISG + G + +V R M SE+
Sbjct: 76 YLRLGHDVCAE---KLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRP 132
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
++ TF SM++AC + +EG H ++K G + + +A ++ Y K + S+ +F
Sbjct: 133 NEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLF 192
Query: 136 KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE 195
+++S KN+VSW M+V + QNG +E+ + F ++ G PD T +V+ SC ++ +
Sbjct: 193 EDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVR 252
Query: 196 EGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYS 255
HG+ + G ++ AL+ LY K G +ED +F E+T D ++WTA+++AY+
Sbjct: 253 LAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYA 312
Query: 256 QFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ 315
G + I+ FE M+ +G+ PD VTF +L+ CS + LVE+G FE+M+K + I P
Sbjct: 313 THGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRL 372
Query: 316 DHYSCIIDLFSRAGRLEEARDFINQMLFRDS 346
DHYSC++DL R+G L++A I +M S
Sbjct: 373 DHYSCMVDLLGRSGLLQDAYGLIKEMPMEPS 403
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 135/274 (49%), Gaps = 15/274 (5%)
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
S++ A ++++ H ++K+ + + G LV Y + AE +F EM +
Sbjct: 36 SLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPER 95
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDM--QKYGVVPDDFTLGSVISSCGNLASLEEGAQ 199
++VSW +++ GY GY + ++ M + G P++ T S+IS+C S EEG
Sbjct: 96 DLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRC 155
Query: 200 FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
HG+ + G++ V V NA ++ YGK G + +LF +++ K+ VSW ++ + Q G
Sbjct: 156 IHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGL 215
Query: 260 ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH-- 317
A + + F G +PD+ TF+ VL C +V I HG+I
Sbjct: 216 AEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGI-------HGLIMFGGFSG 268
Query: 318 ----YSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ ++DL+S+ GRLE++ +++ DS+
Sbjct: 269 NKCITTALLDLYSKLGRLEDSSTVFHEITSPDSM 302
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 181/315 (57%), Gaps = 1/315 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E++R++F M +RD ++WT++ISG +Q+ +A+ F +M +++T S++ A
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
G+Q H + +K GF N++ GSAL+D+Y + + A+ VF + +N VSW
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
A++ G+ + +E+A+++F M + G P F+ S+ +C + LE+G H +
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
SG N L+ +Y K GSI D ++F + +D VSW +L++AY+Q G E +
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
FE M G++P++++F+ VL+ CS + L+++G +E M K+ GI+P HY ++DL
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLG 409
Query: 327 RAGRLEEARDFINQM 341
RAG L A FI +M
Sbjct: 410 RAGDLNRALRFIEEM 424
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 153/281 (54%), Gaps = 1/281 (0%)
Query: 67 EMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCR 126
++ + D+ + ++L C L +G H++I+++ F+ +I G+ L++MY KC
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 127 SVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVIS 186
S++ A VF++M ++ V+WT ++ GY Q+ +A+ F M ++G P++FTL SVI
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 187 SCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS 246
+ G Q HG + G S V V +AL+ LY + G ++D +F + +++VS
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 247 WTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMT 306
W AL++ +++ + + LF+ ML G +P ++ + CS T +E+G + M
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289
Query: 307 KEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
K G + + ++D+++++G + +AR +++ RD V
Sbjct: 290 KS-GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV 329
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 131/232 (56%), Gaps = 1/232 (0%)
Query: 23 RLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGS 82
R +++D++ +F + R+ +SW ++I+G + +A+++F+ M + +++ S
Sbjct: 208 RYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYAS 267
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN 142
+ AC L++G H+Y+IK+G K +AG+ L+DMY K S+ A +F ++ ++
Sbjct: 268 LFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRD 327
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
VVSW ++L Y Q+G+ +EAV F +M++ G+ P++ + SV+++C + L+EG ++
Sbjct: 328 VVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYE 387
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSA 253
+ G++ +V L G+ G + R EM + + W AL++A
Sbjct: 388 LMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 180/318 (56%), Gaps = 5/318 (1%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
++F +M RD +SWT +I+G T+ GL++EA+D F +M +E + T+ +L + G V
Sbjct: 162 KVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVG 218
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLV 151
L G H I+K ++ G+AL+DMY KC + A VF E+ K+ VSW +M+
Sbjct: 219 CLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMIS 278
Query: 152 GYGQNGYSEEAVKIFCDMQ-KYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLI 210
G S+EA+ +F MQ G+ PD L SV+S+C +L +++ G H L +G+
Sbjct: 279 GLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIK 338
Query: 211 SFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESM 270
+ A+V +Y KCG IE +F+ + K+ +W AL+ + G E++R FE M
Sbjct: 339 WDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEM 398
Query: 271 LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESM-TKEHGIIPIQDHYSCIIDLFSRAG 329
+ G KP+ VTF+ L+ C T LV++G + F M ++E+ + P +HY C+IDL RAG
Sbjct: 399 VKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAG 458
Query: 330 RLEEARDFINQMLFRDSV 347
L+EA + + M + V
Sbjct: 459 LLDEALELVKAMPVKPDV 476
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 148/299 (49%), Gaps = 5/299 (1%)
Query: 42 SISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHS 101
S S+ +++S R I ++ S D +TF + ACG ++EG Q H
Sbjct: 71 SFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHG 130
Query: 102 YIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEE 161
+ K GF D+IY ++LV Y C ++A VF EM ++VVSWT ++ G+ + G +E
Sbjct: 131 IVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKE 190
Query: 162 AVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVS 221
A+ F M V P+ T V+ S G + L G HG+ L + + NAL+
Sbjct: 191 ALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALID 247
Query: 222 LYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLT-HGLKPDKV 280
+Y KC + D R+F E+ KD+VSW +++S ++ E I LF M T G+KPD
Sbjct: 248 MYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGH 307
Query: 281 TFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFIN 339
VLS C+ V+ G + E + GI + I+D++++ G +E A + N
Sbjct: 308 ILTSVLSACASLGAVDHGRWVHEYILTA-GIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 142/280 (50%), Gaps = 34/280 (12%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR-SEMLETDQYTFGSMLT 85
+ D+ ++F ++ ++D +SW SMISG +EAID+F M+ S ++ D + S+L+
Sbjct: 255 LSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLS 314
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
AC + A+ G H YI+ G K + + G+A+VDMY KC +++A +F + KNV +
Sbjct: 315 ACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFT 374
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W A+L G +G+ E+++ F +M K G P+ T + +++C + ++EG ++
Sbjct: 375 WNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRY----- 429
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
+ K S E + LF ++ + ++ + G +E +
Sbjct: 430 -----------------FHKMKSRE--YNLFPKLE-----HYGCMIDLLCRAGLLDEALE 465
Query: 266 LFESMLTHGLKPDKVTFIGVLSVC-SRTRLVEKGNQIFES 304
L ++M +KPD +LS C +R L+E +I +S
Sbjct: 466 LVKAM---PVKPDVRICGAILSACKNRGTLMELPKEILDS 502
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 174/311 (55%), Gaps = 1/311 (0%)
Query: 37 MRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEG 96
+ ER +SWT+++S QNG EA+++F +MR ++ D S+L A + L++G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 97 NQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQN 156
H+ ++K G + +L MY KC V +A+ +F +M N++ W AM+ GY +N
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
GY+ EA+ +F +M V PD ++ S IS+C + SLE+ + S V +S
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS 361
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLK 276
+AL+ ++ KCGS+E +F +D V W+A++ Y G+A E I L+ +M G+
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH 421
Query: 277 PDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARD 336
P+ VTF+G+L C+ + +V +G F M +H I P Q HY+C+IDL RAG L++A +
Sbjct: 422 PNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYE 480
Query: 337 FINQMLFRDSV 347
I M + V
Sbjct: 481 VIKCMPVQPGV 491
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 175/324 (54%), Gaps = 9/324 (2%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+RQ+F D+ W ++I G ++N ++A+ ++ M+ + D +TF +L AC G
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK--EMSYKNVVSWT 147
+ LQ G H+ + + GF +++ + L+ +Y KCR + SA TVF+ + + +VSWT
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
A++ Y QNG EA++IF M+K V PD L SV+++ L L++G H +
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
GL + +L ++Y KCG + LF +M + + W A++S Y++ G A E I +F
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMF 311
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY---SCIIDL 324
M+ ++PD ++ +S C++ +E+ ++E + G +D S +ID+
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV----GRSDYRDDVFISSALIDM 367
Query: 325 FSRAGRLEEARDFINQMLFRDSVL 348
F++ G +E AR ++ L RD V+
Sbjct: 368 FAKCGSVEGARLVFDRTLDRDVVV 391
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 128/228 (56%), Gaps = 1/228 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ ++ LF M+ + I W +MISG +NG REAID+F EM ++ + D + S ++A
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA 332
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C V +L++ + Y+ ++ ++D+++ SAL+DM+ KC SV+ A VF ++VV W
Sbjct: 333 CAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVW 392
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
+AM+VGYG +G + EA+ ++ M++ GV P+D T ++ +C + + EG F
Sbjct: 393 SAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD 452
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSA 253
+ ++ L G+ G ++ + + M + V+ W AL+SA
Sbjct: 453 HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 123/247 (49%), Gaps = 3/247 (1%)
Query: 97 NQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQN 156
Q H+ ++ G + + + + L+ + A VF ++ + W A++ GY +N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
+ ++A+ ++ +MQ V PD FT ++ +C L+ L+ G H G + V V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFKDE--VSWTALVSAYSQFGKANETIRLFESMLTHG 274
N L++LY KC + +F + + VSWTA+VSAY+Q G+ E + +F M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 275 LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
+KPD V + VL+ + + +++G I S+ K G+ D + ++++ G++ A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM-GLEIEPDLLISLNTMYAKCGQVATA 276
Query: 335 RDFINQM 341
+ ++M
Sbjct: 277 KILFDKM 283
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 181/328 (55%), Gaps = 5/328 (1%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
D Y GRL D +++F M RD ISW S+I N AI +F+EMR ++
Sbjct: 290 DLYAEFGRL---RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTG-FKDNIYAGSALVDMYCKCRSVKSAETV 134
D T S+ + + ++ + ++ G F ++I G+A+V MY K V SA V
Sbjct: 347 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 406
Query: 135 FKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYG-VVPDDFTLGSVISSCGNLAS 193
F + +V+SW ++ GY QNG++ EA++++ M++ G + + T SV+ +C +
Sbjct: 407 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 466
Query: 194 LEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSA 253
L +G + HG L +GL V V +L +YGKCG +ED LF ++ + V W L++
Sbjct: 467 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIAC 526
Query: 254 YSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIP 313
+ G + + LF+ ML G+KPD +TF+ +LS CS + LV++G FE M ++GI P
Sbjct: 527 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP 586
Query: 314 IQDHYSCIIDLFSRAGRLEEARDFINQM 341
HY C++D++ RAG+LE A FI M
Sbjct: 587 SLKHYGCMVDMYGRAGQLETALKFIKSM 614
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 146/275 (53%), Gaps = 11/275 (4%)
Query: 18 YLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFRE-MRSEMLETD 76
Y LG + + +R F ++ RD +W MISG + G E I F M S L D
Sbjct: 96 YCYLGNVAL---ARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPD 152
Query: 77 QYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK 136
TF S+L AC V+ +GN+ H +K GF ++Y ++L+ +Y + ++V +A +F
Sbjct: 153 YRTFPSVLKACRTVI---DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFD 209
Query: 137 EMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE 196
EM +++ SW AM+ GY Q+G ++EA+ + ++ D T+ S++S+C
Sbjct: 210 EMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNR 265
Query: 197 GAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQ 256
G H ++ GL S + VSN L+ LY + G + DC ++F M +D +SW +++ AY
Sbjct: 266 GVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYEL 325
Query: 257 FGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSR 291
+ I LF+ M ++PD +T I + S+ S+
Sbjct: 326 NEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQ 360
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 131/255 (51%), Gaps = 11/255 (4%)
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
LQ H+ ++ + N+ + LV++YC +V A F + ++V +W M+ G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 153 YGQNGYSEEAVKIFC-DMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLIS 211
YG+ G S E ++ F M G+ PD T SV+ +C ++ +G + H +AL G +
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMW 183
Query: 212 FVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESML 271
V V+ +L+ LY + ++ + LF EM +D SW A++S Y Q G A E + L
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-----TL 238
Query: 272 THGLKP-DKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGR 330
++GL+ D VT + +LS C+ +G I S + +HG+ + +IDL++ GR
Sbjct: 239 SNGLRAMDSVTVVSLLSACTEAGDFNRGVTI-HSYSIKHGLESELFVSNKLIDLYAEFGR 297
Query: 331 LEEARDFINQMLFRD 345
L + + ++M RD
Sbjct: 298 LRDCQKVFDRMYVRD 312
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Query: 193 SLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVS 252
+L+ H +VS I V +S LV+LY G++ F + +D +W ++S
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 253 AYSQFGKANETIRLFES-MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGI 311
Y + G ++E IR F ML+ GL PD TF VL C R V GN+I + + G
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKI-HCLALKFGF 181
Query: 312 IPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRD 345
+ + +I L+SR + AR ++M RD
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRD 215
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 2/325 (0%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
+ ++R+LF M ER+ +SW +M+ G EA+D MR E+ D T +L
Sbjct: 344 LTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILN 403
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS-YKNVV 144
C G+ +Q G QAH +I + G+ N+ +AL+DMY KC +++SA F++MS ++ V
Sbjct: 404 VCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEV 463
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
SW A+L G + G SE+A+ F MQ P +TL ++++ C N+ +L G HG
Sbjct: 464 SWNALLTGVARVGRSEQALSFFEGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHGFL 522
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
+ G V + A+V +Y KC + +F E +D + W +++ + G++ E
Sbjct: 523 IRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVF 582
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
LF + G+KPD VTF+G+L C R VE G Q F SM+ ++ I P +HY C+I+L
Sbjct: 583 ELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIEL 642
Query: 325 FSRAGRLEEARDFINQMLFRDSVLM 349
+ + G L + +F+ M F + M
Sbjct: 643 YCKYGCLHQLEEFLLLMPFDPPMQM 667
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 174/358 (48%), Gaps = 33/358 (9%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
G+ ++D+R+LF +M ERD SW ++I+ C QNG+ E +FR M + + + +F
Sbjct: 107 GKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFA 166
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
+L +CG ++ L+ Q H ++K G+ N+ +++VD+Y KCR + A VF E+
Sbjct: 167 GVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNP 226
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
+ VSW ++ Y + G+++EAV +F M + V P + T+ SV+ +C +LE G H
Sbjct: 227 SDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIH 286
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKAN 261
IA+ +++ VS ++ +Y KC +E R+F + KD SWT+ +S Y+ G
Sbjct: 287 AIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTR 346
Query: 262 ETIRLFESMLTHGL-------------------------------KPDKVTFIGVLSVCS 290
E LF+ M + D VT + +L+VCS
Sbjct: 347 EARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCS 406
Query: 291 RTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQML-FRDSV 347
V+ G Q HG + ++D++ + G L+ A + QM RD V
Sbjct: 407 GISDVQMGKQA-HGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEV 463
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 179/376 (47%), Gaps = 48/376 (12%)
Query: 20 VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYT 79
V G+ ++ D+R++F ++ +SW ++ + G + EA+ +F +M + +T
Sbjct: 206 VYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHT 265
Query: 80 FGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS 139
S++ AC +AL+ G H+ +K + +++ DMY KC ++SA VF +
Sbjct: 266 VSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTR 325
Query: 140 YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVP----------------------- 176
K++ SWT+ + GY +G + EA ++F M + +V
Sbjct: 326 SKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTL 385
Query: 177 --------DDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGS 228
D+ TL +++ C ++ ++ G Q HG G + V V+NAL+ +YGKCG+
Sbjct: 386 MRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGT 445
Query: 229 IEDCHRLFSEMT-FKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLS 287
++ + F +M+ +DEVSW AL++ ++ G++ + + FE M KP K T +L+
Sbjct: 446 LQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLA 504
Query: 288 VCSRTRLVEKGNQIFESMTKEHGIIPIQDHYS-------CIIDLFSRAGRLEEARDFINQ 340
C+ + G I HG + I+D Y ++D++S+ + A + +
Sbjct: 505 GCANIPALNLGKAI-------HGFL-IRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKE 556
Query: 341 MLFRDSVLMQLVGQPC 356
RD +L + + C
Sbjct: 557 AATRDLILWNSIIRGC 572
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 128/268 (47%), Gaps = 1/268 (0%)
Query: 78 YTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE 137
+ + + +C + + + S+++ I+ + ++ Y KC V A +F+E
Sbjct: 62 WLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEE 121
Query: 138 MSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG 197
M ++ SW A++ QNG S+E ++F M + GV + + V+ SCG + L
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLL 181
Query: 198 AQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQF 257
Q H + G V + ++V +YGKC + D R+F E+ +VSW +V Y +
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH 317
G +E + +F ML ++P T V+ CSR+ +E G ++ ++ + ++
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG-KVIHAIAVKLSVVADTVV 300
Query: 318 YSCIIDLFSRAGRLEEARDFINQMLFRD 345
+ + D++ + RLE AR +Q +D
Sbjct: 301 STSVFDMYVKCDRLESARRVFDQTRSKD 328
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 185/312 (59%), Gaps = 6/312 (1%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+ ++F + E+D ++W +MIS Q L + A+ V++ M ++ D++TFGS+L
Sbjct: 342 AHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLD 401
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
+ L+ + IIK G I +AL+ Y K ++ A+ +F+ KN++SW A+
Sbjct: 402 LDVLE---MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAI 458
Query: 150 LVGYGQNGYSEEAVKIF-CDMQ-KYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
+ G+ NG+ E ++ F C ++ + ++PD +TL +++S C + +SL G+Q H L
Sbjct: 459 ISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRH 518
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
G + NAL+++Y +CG+I++ +F++M+ KD VSW +L+SAYS+ G+ + +
Sbjct: 519 GQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTY 578
Query: 268 ESMLTHG-LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
++M G + PD TF VLS CS LVE+G +IF SM + HG+I DH+SC++DL
Sbjct: 579 KTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLG 638
Query: 327 RAGRLEEARDFI 338
RAG L+EA +
Sbjct: 639 RAGHLDEAESLV 650
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 176/330 (53%), Gaps = 19/330 (5%)
Query: 27 IEDSRQLFCDMRERDSIS-WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
IE + ++F M ERD ++ W +MI+GC ++G H ++++FREM + D++ F ++L+
Sbjct: 139 IEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILS 198
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE--MSYKNV 143
C +L G Q HS +IK GF +AL+ MY C+ V A VF+E ++ ++
Sbjct: 199 MC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQ 257
Query: 144 VSWTAMLVGYGQNGYS-EEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
V++ ++ G G+ +E++ +F M + + P D T SV+ SC A G Q HG
Sbjct: 258 VTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQVHG 312
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
+A+ +G + VSNA +++Y H++F + KD V+W ++S+Y+Q
Sbjct: 313 LAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKS 372
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
+ +++ M G+KPD+ TF +L+ ++E + ++ + G+ + + +I
Sbjct: 373 AMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE----MVQACIIKFGLSSKIEISNALI 428
Query: 323 DLFSRAGRLEEARDFINQMLFRDSVLMQLV 352
+S+ G++E+A +LF S+ L+
Sbjct: 429 SAYSKNGQIEKA-----DLLFERSLRKNLI 453
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 155/315 (49%), Gaps = 12/315 (3%)
Query: 36 DMRERDSISWTSMISGCTQNGLHR-EAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQ 94
D+ RD +++ +I G G R E++ VFR+M L TF S++ +C
Sbjct: 251 DVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM-- 306
Query: 95 EGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYG 154
G+Q H IKTG++ +A + MY +A VF+ + K++V+W M+ Y
Sbjct: 307 -GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYN 365
Query: 155 QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT 214
Q + A+ ++ M GV PD+FT GS++++ +L LE + GL S +
Sbjct: 366 QAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE---MVQACIIKFGLSSKIE 422
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
+SNAL+S Y K G IE LF K+ +SW A++S + G E + F +L
Sbjct: 423 ISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESE 482
Query: 275 LK--PDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLE 332
++ PD T +LS+C T + G+Q + + HG + +I+++S+ G ++
Sbjct: 483 VRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR-HGQFKETLIGNALINMYSQCGTIQ 541
Query: 333 EARDFINQMLFRDSV 347
+ + NQM +D V
Sbjct: 542 NSLEVFNQMSEKDVV 556
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 136/240 (56%), Gaps = 9/240 (3%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFR-EMRSEM-LETDQYTFGSML 84
IE + LF ++ ISW ++ISG NG E ++ F + SE+ + D YT ++L
Sbjct: 437 IEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLL 496
Query: 85 TACGGVMALQEGNQAHSYIIKTG-FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV 143
+ C +L G+Q H+Y+++ G FK+ + G+AL++MY +C +++++ VF +MS K+V
Sbjct: 497 SICVSTSSLMLGSQTHAYVLRHGQFKETLI-GNALINMYSQCGTIQNSLEVFNQMSEKDV 555
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDMQKYG-VVPDDFTLGSVISSCGNLASLEEGAQ-FH 201
VSW +++ Y ++G E AV + MQ G V+PD T +V+S+C + +EEG + F+
Sbjct: 556 VSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFN 615
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRL--FSEMTFKDEVS-WTALVSAYSQFG 258
+ G+I V + LV L G+ G +++ L SE T V W AL SA + G
Sbjct: 616 SMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHG 675
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 135/277 (48%), Gaps = 37/277 (13%)
Query: 49 ISGCTQNGLHREAIDVFREM-RSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTG 107
++G T++G +R A+ +F ++ R L DQY+ +T + G Q H Y I++G
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 108 FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT-------------------- 147
+ + + L+ +Y + ++ S + F E+ +V SWT
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 148 ------------AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE 195
AM+ G ++GY E +V++F +M K GV D F +++S C + SL+
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLD 206
Query: 196 EGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSE--MTFKDEVSWTALVSA 253
G Q H + + +G +V NAL+++Y C + D +F E + +D+V++ ++
Sbjct: 207 FGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDG 266
Query: 254 YSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCS 290
+ F K +E++ +F ML L+P +TF+ V+ CS
Sbjct: 267 LAGF-KRDESLLVFRKMLEASLRPTDLTFVSVMGSCS 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 4/159 (2%)
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVV-PDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
L G ++G + A+K+F D+ + + PD +++ I++ +L G Q H A+ SG
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
L+ VSN L+SLY + G++ + F E+ D SWT L+SA + G +F+
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK 307
M + D + +++ C + E ++F M K
Sbjct: 148 KMPE---RDDVAIWNAMITGCKESGYHETSVELFREMHK 183
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 186/324 (57%), Gaps = 5/324 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQ-----NGLHREAIDVFREMRSEMLETDQYTFG 81
++++ +LF M ++ +++ +MISG Q + EA +F +M+ LE TF
Sbjct: 303 LKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFS 362
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
+L AC L+ G Q H+ I K F+ + + GSAL+++Y S + F S +
Sbjct: 363 VVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQ 422
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
++ SWT+M+ + QN E A +F + + P+++T+ ++S+C + A+L G Q
Sbjct: 423 DIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQ 482
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKAN 261
G A+ SG+ +F +V + +S+Y K G++ +++F E+ D +++A++S+ +Q G AN
Sbjct: 483 GYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSAN 542
Query: 262 ETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCI 321
E + +FESM THG+KP++ F+GVL C LV +G + F+ M ++ I P + H++C+
Sbjct: 543 EALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCL 602
Query: 322 IDLFSRAGRLEEARDFINQMLFRD 345
+DL R GRL +A + I F+D
Sbjct: 603 VDLLGRTGRLSDAENLILSSGFQD 626
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 165/314 (52%), Gaps = 13/314 (4%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+RQLF M ER+ IS+ S+ISG TQ G + +A+++F E R L+ D++T+ L CG
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
L G H ++ G ++ + L+DMY KC + A ++F ++ VSW ++
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSL 220
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCG---NLASLEEGAQFHGIALV 206
+ GY + G +EE + + M + G+ + LGSV+ +C N +E+G H
Sbjct: 221 ISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAK 280
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK-----AN 261
G+ + V AL+ +Y K GS+++ +LFS M K+ V++ A++S + Q + ++
Sbjct: 281 LGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASS 340
Query: 262 ETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY--S 319
E +LF M GL+P TF VL CS + +E G QI + K + D + S
Sbjct: 341 EAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF---QSDEFIGS 397
Query: 320 CIIDLFSRAGRLEE 333
+I+L++ G E+
Sbjct: 398 ALIELYALMGSTED 411
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 169/343 (49%), Gaps = 19/343 (5%)
Query: 1 MFLLEVLWWICIRKWDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHRE 60
+FL+ VL D Y G+L + + LF ERD +SW S+ISG + G E
Sbjct: 183 VFLINVLI-------DMYSKCGKL---DQAMSLFDRCDERDQVSWNSLISGYVRVGAAEE 232
Query: 61 AIDVFREMRSEMLETDQYTFGSMLTACGGVMA---LQEGNQAHSYIIKTGFKDNIYAGSA 117
+++ +M + L Y GS+L AC + +++G H Y K G + +I +A
Sbjct: 233 PLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTA 292
Query: 118 LVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQ-----NGYSEEAVKIFCDMQKY 172
L+DMY K S+K A +F M KNVV++ AM+ G+ Q + S EA K+F DMQ+
Sbjct: 293 LLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRR 352
Query: 173 GVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDC 232
G+ P T V+ +C +LE G Q H + + S + +AL+ LY GS ED
Sbjct: 353 GLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDG 412
Query: 233 HRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRT 292
+ F+ + +D SWT+++ + Q + LF + + ++P++ T ++S C+
Sbjct: 413 MQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADF 472
Query: 293 RLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEAR 335
+ G QI + + GI + I +++++G + A
Sbjct: 473 AALSSGEQI-QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLAN 514
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 156/314 (49%), Gaps = 13/314 (4%)
Query: 41 DSISWTSMISGCTQN-GLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQA 99
++I+ S+++ T+ GL + + ++ L+++ Y A G + L G A
Sbjct: 12 NNIAQDSLVTLITKRVGLGYRFLSSLCQPKNTALDSEGYKILFQTAAKSGSVVL--GKLA 69
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYS 159
H ++IK+ +Y + L++MYCKCR + A +F M +N++S+ +++ GY Q G+
Sbjct: 70 HGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFY 129
Query: 160 EEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNAL 219
E+A+++F + ++ + D FT + CG L+ G HG+ +V+GL V + N L
Sbjct: 130 EQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVL 189
Query: 220 VSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDK 279
+ +Y KCG ++ LF +D+VSW +L+S Y + G A E + L M GL
Sbjct: 190 IDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTT 249
Query: 280 VTFIGVLSVCS---RTRLVEKGNQIFESMTK---EHGIIPIQDHYSCIIDLFSRAGRLEE 333
VL C +EKG I K E I+ + ++D++++ G L+E
Sbjct: 250 YALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVV----RTALLDMYAKNGSLKE 305
Query: 334 ARDFINQMLFRDSV 347
A + M ++ V
Sbjct: 306 AIKLFSLMPSKNVV 319
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 99/217 (45%), Gaps = 8/217 (3%)
Query: 131 AETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGN 190
A+T F ++ ++V+ VG G S C + + + + + + +
Sbjct: 7 AKTFFNNIAQDSLVTLITKRVGLGYRFLSS-----LCQPKNTALDSEGYKI--LFQTAAK 59
Query: 191 LASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTAL 250
S+ G HG + S L + + N L+++Y KC + +LF M ++ +S+ +L
Sbjct: 60 SGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSL 119
Query: 251 VSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHG 310
+S Y+Q G + + LF LK DK T+ G L C ++ G ++ + +G
Sbjct: 120 ISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-ELLHGLVVVNG 178
Query: 311 IIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ + +ID++S+ G+L++A ++ RD V
Sbjct: 179 LSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQV 215
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 182/320 (56%), Gaps = 5/320 (1%)
Query: 23 RLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEM-LETDQYTFG 81
+L I +R+LF +M E + +SWTS+ISG G + A+ +F++M + + ++YTF
Sbjct: 76 KLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFA 135
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM-SY 140
S+ AC + + G H+ + +G + NI S+LVDMY KC V++A VF M Y
Sbjct: 136 SVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGY 195
Query: 141 -KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV--PDDFTLGSVISSCGNLASLEEG 197
+NVVSWT+M+ Y QN EA+++F + F L SVIS+C +L L+ G
Sbjct: 196 GRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWG 255
Query: 198 AQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQF 257
HG+ G S V+ +L+ +Y KCGS+ ++F + +S+T+++ A ++
Sbjct: 256 KVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKH 315
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH 317
G ++LF+ M+ + P+ VT +GVL CS + LV +G + M +++G++P H
Sbjct: 316 GLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRH 375
Query: 318 YSCIIDLFSRAGRLEEARDF 337
Y+C++D+ R GR++EA +
Sbjct: 376 YTCVVDMLGRFGRVDEAYEL 395
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 123/241 (51%), Gaps = 8/241 (3%)
Query: 97 NQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQN 156
N H+ +K GF + + + LV Y K + + +A +F EM NVVSWT+++ GY
Sbjct: 49 NLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDM 108
Query: 157 GYSEEAVKIFCDMQK-YGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTV 215
G + A+ +F M + V P+++T SV +C LA G H +SGL + V
Sbjct: 109 GKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVV 168
Query: 216 SNALVSLYGKCGSIEDCHRLFSEMT--FKDEVSWTALVSAYSQFGKANETIRLFESMLTH 273
S++LV +YGKC +E R+F M ++ VSWT++++AY+Q + +E I LF S
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRS-FNA 227
Query: 274 GLKPDKVT---FIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGR 330
L D+ V+S CS ++ G ++ + G + ++D++++ G
Sbjct: 228 ALTSDRANQFMLASVISACSSLGRLQWG-KVAHGLVTRGGYESNTVVATSLLDMYAKCGS 286
Query: 331 L 331
L
Sbjct: 287 L 287
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 182/321 (56%), Gaps = 3/321 (0%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM--RSEMLETDQYTFGSMLTAC 87
+R++F +++ ++W++MI G +N + +EA +VF +M + G +L C
Sbjct: 259 ARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGC 318
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
L G H Y +K GF ++ + ++ Y K S+ A F E+ K+V+S+
Sbjct: 319 ARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYN 378
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
+++ G N EE+ ++F +M+ G+ PD TL V+++C +LA+L G+ HG +V
Sbjct: 379 SLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVH 438
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
G ++ NAL+ +Y KCG ++ R+F M +D VSW ++ + G E + LF
Sbjct: 439 GYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLF 498
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK-EHGIIPIQDHYSCIIDLFS 326
SM G+ PD+VT + +LS CS + LV++G Q+F SM++ + +IP DHY+C+ DL +
Sbjct: 499 NSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLA 558
Query: 327 RAGRLEEARDFINQMLFRDSV 347
RAG L+EA DF+N+M F +
Sbjct: 559 RAGYLDEAYDFVNKMPFEPDI 579
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 175/346 (50%), Gaps = 15/346 (4%)
Query: 9 WICIRKWDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM 68
++C D Y G L M + ++F +M +RD ++W +MISG + + + I +F +M
Sbjct: 139 YVCTALVDFYAKCGELEM---AIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDM 195
Query: 69 RS-EMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRS 127
R + L + T M A G AL+EG H Y + GF +++ + ++D+Y K +
Sbjct: 196 RRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKC 255
Query: 128 VKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTL------ 181
+ A VF KN V+W+AM+ GY +N +EA ++F M +V D+ +
Sbjct: 256 IIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM----LVNDNVAMVTPVAI 311
Query: 182 GSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF 241
G ++ C L G H A+ +G I +TV N ++S Y K GS+ D R FSE+
Sbjct: 312 GLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGL 371
Query: 242 KDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQI 301
KD +S+ +L++ + E+ RLF M T G++PD T +GVL+ CS + G+
Sbjct: 372 KDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSC 431
Query: 302 FESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
HG + ++D++++ G+L+ A+ + M RD V
Sbjct: 432 -HGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIV 476
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 123/220 (55%), Gaps = 4/220 (1%)
Query: 29 DSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACG 88
D+ + F ++ +D IS+ S+I+GC N E+ +F EMR+ + D T +LTAC
Sbjct: 361 DAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS 420
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
+ AL G+ H Y + G+ N +AL+DMY KC + A+ VF M +++VSW
Sbjct: 421 HLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNT 480
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
ML G+G +G +EA+ +F MQ+ GV PD+ TL +++S+C + ++EG Q ++ G
Sbjct: 481 MLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFN-SMSRG 539
Query: 209 ---LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEV 245
+I + N + L + G +++ + ++M F+ ++
Sbjct: 540 DFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDI 579
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 161/330 (48%), Gaps = 14/330 (4%)
Query: 27 IEDSRQLFCDMRER--DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSML 84
+E +R +F ++ + I+W MI N +A+D++ +M + + +YT+ +L
Sbjct: 51 VELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVL 110
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV 144
AC G+ A+ +G HS++ + F ++Y +ALVD Y KC ++ A VF EM +++V
Sbjct: 111 KACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMV 170
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKY-GVVPDDFTLGSVISSCGNLASLEEGAQFHGI 203
+W AM+ G+ + + + +F DM++ G+ P+ T+ + + G +L EG HG
Sbjct: 171 AWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGY 230
Query: 204 ALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANET 263
G + + V ++ +Y K I R+F K+EV+W+A++ Y + E
Sbjct: 231 CTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEA 290
Query: 264 IRLFESMLTHGLKPDKVTFIGVLSV------CSRTRLVEKGNQIFESMTKEHGIIPIQDH 317
+F ML + D V + +++ C+R + G + K I+ +
Sbjct: 291 GEVFFQMLVN----DNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQ 346
Query: 318 YSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ II +++ G L +A +++ +D +
Sbjct: 347 -NTIISFYAKYGSLCDAFRQFSEIGLKDVI 375
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 17/258 (6%)
Query: 80 FGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDM---YCKCRSVKSAETVFK 136
F S+L C L G H +++K + + + LV++ Y C V+ A VF
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSL--TLSSSTVLVNLTRLYASCNEVELARHVFD 59
Query: 137 EMSYK--NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASL 194
E+ + N ++W M+ Y N ++E+A+ ++ M GV P +T V+ +C L ++
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 195 EEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAY 254
++G H S + + V ALV Y KCG +E ++F EM +D V+W A++S +
Sbjct: 120 DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 255 SQFGKANETIRLFESM-LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK------ 307
S + I LF M GL P+ T +G+ R + +G + T+
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 308 ---EHGIIPIQDHYSCII 322
+ GI+ + CII
Sbjct: 240 LVVKTGILDVYAKSKCII 257
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 10 ICIRKWDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR 69
IC D Y G+L + ++++F M +RD +SW +M+ G +GL +EA+ +F M+
Sbjct: 446 ICNALMDMYTKCGKL---DVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQ 502
Query: 70 SEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVK 129
+ D+ T ++L+AC + EG Q + + + F
Sbjct: 503 ETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFN-------------------- 542
Query: 130 SAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCG 189
V + + N + T +L + GY +EA + K PD LG+++S+C
Sbjct: 543 ----VIPRIDHYNCM--TDLL---ARAGYLDEAYDF---VNKMPFEPDIRVLGTLLSACW 590
Query: 190 NLASLEEGAQ 199
+ E G +
Sbjct: 591 TYKNAELGNE 600
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 179/303 (59%), Gaps = 7/303 (2%)
Query: 53 TQNGLHREAIDVFREMRSEMLETDQYTF-----GSMLTACGGVMALQEGNQAHSYIIKTG 107
T+NG+ +V E S ++ D ++F S + +CG + G+ H +K G
Sbjct: 91 TKNGVSSVLEEVMLEDSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGG 150
Query: 108 FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFC 167
F ++Y GS+LV +Y V++A VF+EM +NVVSWTAM+ G+ Q + +K++
Sbjct: 151 FISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYS 210
Query: 168 DMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCG 227
M+K P+D+T +++S+C +L +G H L GL S++ +SN+L+S+Y KCG
Sbjct: 211 KMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCG 270
Query: 228 SIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTH-GLKPDKVTFIGVL 286
++D R+F + + KD VSW ++++ Y+Q G A + I LFE M+ G KPD +T++GVL
Sbjct: 271 DLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVL 330
Query: 287 SVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDS 346
S C LV++G + F M EHG+ P +HYSC++DL R G L+EA + I M + +
Sbjct: 331 SSCRHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPN 389
Query: 347 VLM 349
++
Sbjct: 390 SVI 392
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 138/254 (54%), Gaps = 4/254 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E++ ++F +M ER+ +SWT+MISG Q + ++ +MR + + YTF ++L+A
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSA 230
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C G AL +G H + G K ++ ++L+ MYCKC +K A +F + S K+VVSW
Sbjct: 231 CTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSW 290
Query: 147 TAMLVGYGQNGYSEEAVKIF-CDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
+M+ GY Q+G + +A+++F M K G PD T V+SSC + ++EG +F +
Sbjct: 291 NSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA 350
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFGKANETI 264
GL + + LV L G+ G +++ L M K + V W +L+ + G I
Sbjct: 351 EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGI 410
Query: 265 RLFESMLTHGLKPD 278
R E L L+PD
Sbjct: 411 RAAEERLM--LEPD 422
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 180/315 (57%), Gaps = 5/315 (1%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEM-LETDQYTFGSMLTACG 88
+ ++F M +R+ ++W MI +NG +A F++M + L+ D T ++L A
Sbjct: 286 AERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPAS- 344
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
A+ EG H Y ++ GF ++ +AL+DMY +C +KSAE +F M+ KNV+SW +
Sbjct: 345 ---AILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNS 401
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
++ Y QNG + A+++F ++ +VPD T+ S++ + SL EG + H + S
Sbjct: 402 IIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSR 461
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
S + N+LV +Y CG +ED + F+ + KD VSW +++ AY+ G ++ LF
Sbjct: 462 YWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFS 521
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
M+ + P+K TF +L+ CS + +V++G + FESM +E+GI P +HY C++DL R
Sbjct: 522 EMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRT 581
Query: 329 GRLEEARDFINQMLF 343
G A+ F+ +M F
Sbjct: 582 GNFSAAKRFLEEMPF 596
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 173/324 (53%), Gaps = 7/324 (2%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
++ED+ QLF +M + D+ W MI G T GL+ EA+ + M ++ D +T+ ++
Sbjct: 79 LMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIK 138
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
+ G+ +L+EG + H+ +IK GF ++Y ++L+ +Y K AE VF+EM +++VS
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVS 198
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W +M+ GY G ++ +F +M K G PD F+ S + +C ++ S + G + H A+
Sbjct: 199 WNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAV 258
Query: 206 VSGL-ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
S + V V +++ +Y K G + R+F+ M ++ V+W ++ Y++ G+ +
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 265 RLFESML-THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIID 323
F+ M +GL+PD +T I +L + + +G I G +P + +ID
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTI-HGYAMRRGFLPHMVLETALID 373
Query: 324 LFSRAGRLEEARDFINQMLFRDSV 347
++ G+L+ A ++M ++ +
Sbjct: 374 MYGECGQLKSAEVIFDRMAEKNVI 397
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 116/229 (50%), Gaps = 6/229 (2%)
Query: 122 YCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTL 181
+ R ++ A +F EM+ + W M+ G+ G EAV+ + M GV D FT
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 182 GSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF 241
VI S ++SLEEG + H + + G +S V V N+L+SLY K G D ++F EM
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 242 KDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQI 301
+D VSW +++S Y G ++ LF+ ML G KPD+ + + L CS + G +I
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 302 FESMTK---EHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ E G + + + I+D++S+ G + A N M+ R+ V
Sbjct: 254 HCHAVRSRIETGDVMVM---TSILDMYSKYGEVSYAERIFNGMIQRNIV 299
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 119/229 (51%), Gaps = 2/229 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++ + +F M E++ ISW S+I+ QNG + A+++F+E+ L D T S+L A
Sbjct: 381 LKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPA 440
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
++L EG + H+YI+K+ + N ++LV MY C ++ A F + K+VVSW
Sbjct: 441 YAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSW 500
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIAL 205
++++ Y +G+ +V +F +M V P+ T S++++C ++EG + F +
Sbjct: 501 NSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKR 560
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSA 253
G+ + ++ L G+ G+ R EM F W +L++A
Sbjct: 561 EYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNA 609
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 176/309 (56%), Gaps = 2/309 (0%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM-RSEMLETDQYTFGSMLTACGGVM 91
+F + + +SW S+ISGC++NG +A+ ++R + R D+YTF + ++A
Sbjct: 357 VFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPE 416
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLV 151
G H + K G++ +++ G+ L+ MY K R +SA+ VF M ++VV WT M+V
Sbjct: 417 RFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIV 476
Query: 152 GYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLIS 211
G+ + G SE AV+ F +M + D F+L SVI +C ++A L +G FH +A+ +G
Sbjct: 477 GHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDC 536
Query: 212 FVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESML 271
++V ALV +YGK G E +FS + D W +++ AYSQ G + + FE +L
Sbjct: 537 VMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQIL 596
Query: 272 THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRL 331
+G PD VT++ +L+ CS +G ++ M KE GI HYSC+++L S+AG +
Sbjct: 597 ENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLV 655
Query: 332 EEARDFINQ 340
+EA + I Q
Sbjct: 656 DEALELIEQ 664
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 159/327 (48%), Gaps = 9/327 (2%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNG-LHREAIDVFREMRSEMLETDQYTFGSMLT 85
+E +R++F M R+ +S+ ++ S ++N A + M E ++ + TF S++
Sbjct: 148 LEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQ 207
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
C + + G+ +S IIK G+ DN+ ++++ MY C ++SA +F ++ ++ V+
Sbjct: 208 VCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVA 267
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W M+VG +N E+ + F +M GV P FT V++ C L S G H +
Sbjct: 268 WNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARII 327
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
VS ++ + + NAL+ +Y CG + + +F + + VSW +++S S+ G + +
Sbjct: 328 VSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAML 387
Query: 266 LFESMLTHGL-KPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK---EHGIIPIQDHYSCI 321
++ +L +PD+ TF +S + G + +TK E + + +
Sbjct: 388 MYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFV----GTTL 443
Query: 322 IDLFSRAGRLEEARDFINQMLFRDSVL 348
+ ++ + E A+ + M RD VL
Sbjct: 444 LSMYFKNREAESAQKVFDVMKERDVVL 470
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 2/228 (0%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
E ++++F M+ERD + WT MI G ++ G A+ F EM E +D ++ S++ AC
Sbjct: 454 ESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGAC 513
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
+ L++G H I+TGF + ALVDMY K ++AET+F S ++ W
Sbjct: 514 SDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWN 573
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
+ML Y Q+G E+A+ F + + G +PD T S++++C + S +G
Sbjct: 574 SMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ 633
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS--WTALVSA 253
G+ + + +V+L K G +++ L + + + W L+SA
Sbjct: 634 GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSA 681
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 148/325 (45%), Gaps = 25/325 (7%)
Query: 27 IEDSRQLFCDMRERDSIS---------WTSMISGCTQNGLHREAIDV--FREMRSEMLET 75
+E +R++F M +R+ ++ + SM S LH + I + F+ + L
Sbjct: 38 LEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSS-----LHSQIIKLGSFQMIFFMPLNE 92
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGF---KDNIYAGSALVDMYCKCRSVKSAE 132
+ + C + L+ Q H+ ++ G ++ YA + L+ MY +C S++ A
Sbjct: 93 IASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQAR 152
Query: 133 TVFKEMSYKNVVSWTAMLVGYGQNG-YSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNL 191
VF +M ++NVVS+ A+ Y +N ++ A + M V P+ T S++ C L
Sbjct: 153 KVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVL 212
Query: 192 ASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALV 251
+ G+ + + G V V +++ +Y CG +E R+F + +D V+W ++
Sbjct: 213 EDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMI 272
Query: 252 SAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGI 311
+ K + + F +ML G+ P + T+ VL+ CS+ G I + +
Sbjct: 273 VGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSL 332
Query: 312 --IPIQDHYSCIIDLFSRAGRLEEA 334
+P+ + ++D++ G + EA
Sbjct: 333 ADLPLDN---ALLDMYCSCGDMREA 354
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 21/250 (8%)
Query: 113 YAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM-----LVGYGQNGYSEEAVKIFC 167
YA + L+ MY +C S++ A VF +M +N+V+ + V G + +S+ +
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQ--IIKLG 80
Query: 168 DMQKYGVVPDDFTLGSVIS---SCGNLASLEEGAQFHGIALVSGLISFVT---VSNALVS 221
Q +P + SV+ C ++ L+ Q H + L +G + +N L+S
Sbjct: 81 SFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLIS 140
Query: 222 LYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK-ANETIRLFESMLTHGLKPDKV 280
+Y +CGS+E ++F +M ++ VS+ AL SAYS+ A+ L M +KP+
Sbjct: 141 MYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSS 200
Query: 281 TFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY---SCIIDLFSRAGRLEEARDF 337
TF ++ VC+ V G+ + + K + D+ + ++ ++S G LE AR
Sbjct: 201 TFTSLVQVCAVLEDVLMGSSLNSQIIK----LGYSDNVVVQTSVLGMYSSCGDLESARRI 256
Query: 338 INQMLFRDSV 347
+ + RD+V
Sbjct: 257 FDCVNNRDAV 266
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 173/310 (55%), Gaps = 1/310 (0%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMA 92
LF + D + S+I ++ L + +R M S + YTF S++ +C + A
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
L+ G H + + +GF + Y +ALV Y KC ++ A VF M K++V+W +++ G
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSG 182
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISF 212
+ QNG ++EA+++F M++ G PD T S++S+C ++ G+ H + GL
Sbjct: 183 FEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLN 242
Query: 213 VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLT 272
V + AL++LY +CG + +F +M + +WTA++SAY G + + LF M
Sbjct: 243 VKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMED 302
Query: 273 H-GLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRL 331
G P+ VTF+ VLS C+ LVE+G +++ MTK + +IP +H+ C++D+ RAG L
Sbjct: 303 DCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFL 362
Query: 332 EEARDFINQM 341
+EA FI+Q+
Sbjct: 363 DEAYKFIHQL 372
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 142/259 (54%), Gaps = 8/259 (3%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E +RQ+F M E+ ++W S++SG QNGL EAI VF +MR E D TF S+L+A
Sbjct: 158 MEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSA 217
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C A+ G+ H YII G N+ G+AL+++Y +C V A VF +M NV +W
Sbjct: 218 CAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAW 277
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQ-KYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
TAM+ YG +GY ++AV++F M+ G +P++ T +V+S+C + +EEG +
Sbjct: 278 TAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMT 337
Query: 206 VS-GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS----WTALVSAYSQFGKA 260
S LI V +V + G+ G +++ ++ ++ + + WTA++ A
Sbjct: 338 KSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNY 397
Query: 261 NETIRLFESMLTHGLKPDK 279
+ + + + ++ L+PD
Sbjct: 398 DLGVEIAKRLI--ALEPDN 414
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 129/249 (51%), Gaps = 1/249 (0%)
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
+++ Q H+++I TG+ + + L+ + C R++ +F + + + +++
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISF 212
+ V + M V P ++T SVI SC +L++L G H A+VSG
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 213 VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLT 272
V ALV+ Y KCG +E ++F M K V+W +LVS + Q G A+E I++F M
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE 201
Query: 273 HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLE 332
G +PD TF+ +LS C++T V G+ + + + E G+ + +I+L+SR G +
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE-GLDLNVKLGTALINLYSRCGDVG 260
Query: 333 EARDFINQM 341
+AR+ ++M
Sbjct: 261 KAREVFDKM 269
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 184/346 (53%), Gaps = 34/346 (9%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+R++ ++ R+ WT++I G G EAI ++ MR E + +TF ++L ACG
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT-- 147
+ L G Q H+ + +Y G+ ++DMY KC S+ A VF EM ++V+SWT
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 148 -----------------------------AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDD 178
AM+ G+ QN +EA++ F M+K G+ D+
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 179 FTLGSVISSCGNLASLEEGAQFHGIALVSGLIS--FVTVSNALVSLYGKCGSIEDCHRLF 236
T+ IS+C L + + + IA SG V + +AL+ +Y KCG++E+ +F
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 237 SEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG-LKPDKVTFIGVLSVCSRTRLV 295
M K+ ++++++ + G+A E + LF M+T +KP+ VTF+G L CS + LV
Sbjct: 342 MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLV 401
Query: 296 EKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
++G Q+F+SM + G+ P +DHY+C++DL R GRL+EA + I M
Sbjct: 402 DQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTM 447
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 140/304 (46%), Gaps = 44/304 (14%)
Query: 70 SEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSV- 128
SE+ + S+++ + L + Q H ++++ G + Y + L+ K
Sbjct: 39 SEISNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPM 98
Query: 129 -KSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISS 187
A V + + ++N WTA++ GY G +EA+ ++ M+K + P FT +++ +
Sbjct: 99 DPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKA 158
Query: 188 CGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSW 247
CG + L G QFH FV V N ++ +Y KC SI+ ++F EM +D +SW
Sbjct: 159 CGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISW 218
Query: 248 TALVSAYSQFG-------------------------------KANETIRLFESMLTHGLK 276
T L++AY++ G K E + F+ M G++
Sbjct: 219 TELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIR 278
Query: 277 PDKVTFIGVLSVCSR---TRLVEKGNQIFESMTKEHGIIPIQDHY---SCIIDLFSRAGR 330
D+VT G +S C++ ++ ++ QI ++ G P DH S +ID++S+ G
Sbjct: 279 ADEVTVAGYISACAQLGASKYADRAVQI----AQKSGYSP-SDHVVIGSALIDMYSKCGN 333
Query: 331 LEEA 334
+EEA
Sbjct: 334 VEEA 337
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
R+ +E + +LF + +D ++WT+M++G QN +EA++ F M + D+ T
Sbjct: 226 ARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVA 285
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFK--DNIYAGSALVDMYCKCRSVKSAETVFKEMS 139
++AC + A + ++A K+G+ D++ GSAL+DMY KC +V+ A VF M+
Sbjct: 286 GYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN 345
Query: 140 YKNVVSWTAMLVGYGQNGYSEEAVKIFCDM-QKYGVVPDDFTLGSVISSCGNLASLEEGA 198
KNV ++++M++G +G ++EA+ +F M + + P+ T + +C + +++G
Sbjct: 346 NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGR 405
Query: 199 Q-FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSA 253
Q F + G+ +V L G+ G +++ L M+ + W AL+ A
Sbjct: 406 QVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGA 462
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 180/316 (56%), Gaps = 5/316 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++ + ++F + R+ +SW S+++G N + EA+++F M E +E D+ T S+L
Sbjct: 278 VDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRV 337
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C H II+ G++ N A S+L+D Y C V A TV M+YK+VVS
Sbjct: 338 CKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSC 397
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
+ M+ G G S+EA+ IFC M+ P+ T+ S++++C A L HGIA+
Sbjct: 398 STMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIR 454
Query: 207 SGL-ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
L I+ ++V ++V Y KCG+IE R F ++T K+ +SWT ++SAY+ G ++ +
Sbjct: 455 RSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALA 514
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
LF+ M G P+ VT++ LS C+ LV+KG IF+SM +E +Q HYSCI+D+
Sbjct: 515 LFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQ-HYSCIVDML 573
Query: 326 SRAGRLEEARDFINQM 341
SRAG ++ A + I +
Sbjct: 574 SRAGEIDTAVELIKNL 589
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 160/321 (49%), Gaps = 19/321 (5%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEM-LETDQYTFGSMLTACG 88
+R+LF +M ERD ISW+ +I Q+ + +F+EM E E D T S+L AC
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 89 GVMALQEGNQAHSYIIKTGFK-DNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
+ + G H + I+ GF +++ ++L+DMY K V SA VF E + +N+VSW
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
++L G+ N +EA+++F M + V D+ T+ S++ C HG+ +
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRR 357
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
G S ++L+ Y C ++D + MT+KD VS + ++S + G+++E I +F
Sbjct: 358 GYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIF 417
Query: 268 ESMLTHGLKPDKVTFIGVLSVCS-----RTRLVEKGNQIFESMTKEHGIIPIQDHY--SC 320
M P+ +T I +L+ CS RT G I S+ I D +
Sbjct: 418 CHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLA-------INDISVGTS 467
Query: 321 IIDLFSRAGRLEEARDFINQM 341
I+D +++ G +E AR +Q+
Sbjct: 468 IVDAYAKCGAIEMARRTFDQI 488
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 165/329 (50%), Gaps = 27/329 (8%)
Query: 31 RQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGV 90
R+ C M RDS+SW ++ G G E + F ++R E + T ++ AC +
Sbjct: 82 REFDC-MNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL 140
Query: 91 MALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAML 150
+G + H Y+I++GF ++++ MY S+ SA +F EMS ++V+SW+ ++
Sbjct: 141 WF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVI 197
Query: 151 VGYGQNGYSEEAVKIFCDM-QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
Y Q+ +K+F +M + PD T+ SV+ +C + ++ G HG ++ G
Sbjct: 198 RSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGF 257
Query: 210 -ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
++ V V N+L+ +Y K ++ R+F E T ++ VSW ++++ + + +E + +F
Sbjct: 258 DLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFH 317
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFE---SMTKEHGIIPIQDHY------- 318
M+ ++ D+VT + +L VC + FE HG+I I+ Y
Sbjct: 318 LMVQEAVEVDEVTVVSLLRVC----------KFFEQPLPCKSIHGVI-IRRGYESNEVAL 366
Query: 319 SCIIDLFSRAGRLEEARDFINQMLFRDSV 347
S +ID ++ +++A ++ M ++D V
Sbjct: 367 SSLIDAYTSCSLVDDAGTVLDSMTYKDVV 395
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 142/311 (45%), Gaps = 38/311 (12%)
Query: 46 TSMISGCTQNGLHREAIDVFREM-RSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYII 104
+S I + +G RE + + E+ R+ + D + F + AC + L +GN
Sbjct: 13 SSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGN------- 65
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVK 164
++ D Y KC + S F M+ ++ VSW ++ G G+ EE +
Sbjct: 66 ------------SIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLW 113
Query: 165 IFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYG 224
F ++ +G P+ TL VI +C +L +G + HG + SG +V N+++ +Y
Sbjct: 114 WFSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYA 171
Query: 225 KCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG-LKPDKVTFI 283
S+ +LF EM+ +D +SW+ ++ +Y Q + ++LF+ M+ +PD VT
Sbjct: 172 DSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVT 230
Query: 284 GVLSVCSRTRLVEKGNQIFESMTKEHGI-----IPIQDHYSC--IIDLFSRAGRLEEARD 336
VL C+ ++ G + HG + D + C +ID++S+ ++ A
Sbjct: 231 SVLKACTVMEDIDVGRSV-------HGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFR 283
Query: 337 FINQMLFRDSV 347
++ R+ V
Sbjct: 284 VFDETTCRNIV 294
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 94/173 (54%), Gaps = 4/173 (2%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
+++D+ + M +D +S ++MISG G EAI +F MR + T S+L
Sbjct: 378 LVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLN 434
Query: 86 ACGGVMALQEGNQAHSYIIKTGFK-DNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV 144
AC L+ AH I+ ++I G+++VD Y KC +++ A F +++ KN++
Sbjct: 435 ACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNII 494
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG 197
SWT ++ Y NG ++A+ +F +M++ G P+ T + +S+C + +++G
Sbjct: 495 SWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKG 547
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 185/319 (57%), Gaps = 4/319 (1%)
Query: 27 IEDSRQLFCDMR-ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
+ D++++F + +D ISW SMI+G +++ L A ++F +M+ +ETD YT+ +L+
Sbjct: 254 VSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLS 313
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCK--CRSVKSAETVFKEMSYKNV 143
AC G G H +IK G + A +AL+ MY + +++ A ++F+ + K++
Sbjct: 314 ACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDL 373
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGI 203
+SW +++ G+ Q G SE+AVK F ++ + DD+ +++ SC +LA+L+ G Q H +
Sbjct: 374 ISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHAL 433
Query: 204 ALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDE-VSWTALVSAYSQFGKANE 262
A SG +S V ++L+ +Y KCG IE + F +++ K V+W A++ Y+Q G
Sbjct: 434 ATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQV 493
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
++ LF M +K D VTF +L+ CS T L+++G ++ M + I P +HY+ +
Sbjct: 494 SLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAV 553
Query: 323 DLFSRAGRLEEARDFINQM 341
DL RAG + +A++ I M
Sbjct: 554 DLLGRAGLVNKAKELIESM 572
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 168/345 (48%), Gaps = 16/345 (4%)
Query: 9 WICIRKWDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM 68
++ R DSY+ G L + LF +M +RDS+SW +MISG T G +A +F M
Sbjct: 36 YVSNRILDSYIKFGFLGY---ANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCM 92
Query: 69 RSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSV 128
+ + D Y+F +L V G Q H +IK G++ N+Y GS+LVDMY KC V
Sbjct: 93 KRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERV 152
Query: 129 KSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQ-KYGVVPDDFTLGSVISS 187
+ A FKE+S N VSW A++ G+ Q + A + M+ K V D T +++
Sbjct: 153 EDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTL 212
Query: 188 CGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEM-TFKDEVS 246
+ Q H L GL +T+ NA++S Y CGS+ D R+F + KD +S
Sbjct: 213 LDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLIS 272
Query: 247 WTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIF---- 302
W ++++ +S+ LF M H ++ D T+ G+LS CS +QIF
Sbjct: 273 WNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEE-----HQIFGKSL 327
Query: 303 ESMTKEHGIIPIQDHYSCIIDLFSR--AGRLEEARDFINQMLFRD 345
M + G+ + + +I ++ + G +E+A + +D
Sbjct: 328 HGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKD 372
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 139/288 (48%), Gaps = 38/288 (13%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ED+ LF ++ +D ISW S+I+G Q GL +A+ F +RS ++ D Y F ++L +
Sbjct: 358 MEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRS 417
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN-VVS 145
C + LQ G Q H+ K+GF N + S+L+ MY KC ++SA F+++S K+ V+
Sbjct: 418 CSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVA 477
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W AM++GY Q+G + ++ +F M V D T +++++C + ++EG + +
Sbjct: 478 WNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNL-- 535
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
+E +++ M + A V + G N+
Sbjct: 536 -----------------------MEPVYKIQPRME-----HYAAAVDLLGRAGLVNKAKE 567
Query: 266 LFESMLTHGLKPDKV---TFIGVLSVCSRTRLVEK-GNQIFESMTKEH 309
L ESM L PD + TF+GV C + + N + E ++H
Sbjct: 568 LIESM---PLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDH 612
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%)
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
Q+ + H Y IK G +IY + ++D Y K + A +F EM ++ VSW M+ G
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISF 212
Y G E+A +F M++ G D ++ ++ ++ + G Q HG+ + G
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECN 135
Query: 213 VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQ 256
V V ++LV +Y KC +ED F E++ + VSW AL++ + Q
Sbjct: 136 VYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQ 179
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 15/154 (9%)
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKA 260
H A+ G IS + VSN ++ Y K G + + LF EM +D VSW ++S Y+ GK
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 261 NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC 320
+ LF M G D +F +L + + + G Q+ HG++ I+ Y C
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQV-------HGLV-IKGGYEC 134
Query: 321 -------IIDLFSRAGRLEEARDFINQMLFRDSV 347
++D++++ R+E+A + ++ +SV
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSV 168
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 179/340 (52%), Gaps = 31/340 (9%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D+ W MI G + + ++ +++ M + YTF S+L AC + A +E Q H
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAE---------------------------- 132
+ I K G+++++YA ++L++ Y + K A
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 133 ---TVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCG 189
T+F++M+ KN +SWT M+ GY Q ++EA+++F +MQ V PD+ +L + +S+C
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258
Query: 190 NLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTA 249
L +LE+G H + + + L+ +Y KCG +E+ +F + K +WTA
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 250 LVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEH 309
L+S Y+ G E I F M G+KP+ +TF VL+ CS T LVE+G IF SM +++
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 310 GIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLM 349
+ P +HY CI+DL RAG L+EA+ FI +M + + ++
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVI 418
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 129/223 (57%), Gaps = 2/223 (0%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMA 92
LF M E+++ISWT+MISG Q +++EA+ +F EM++ +E D + + L+AC + A
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 262
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
L++G HSY+ KT + + G L+DMY KC ++ A VFK + K+V +WTA++ G
Sbjct: 263 LEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISG 322
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIALVSGLIS 211
Y +G+ EA+ F +MQK G+ P+ T +V+++C +EEG F+ + L
Sbjct: 323 YAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKP 382
Query: 212 FVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSA 253
+ +V L G+ G +++ R EM K + V W AL+ A
Sbjct: 383 TIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 125/297 (42%), Gaps = 40/297 (13%)
Query: 73 LETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRS---VK 129
LE + Y S L C +E Q H+ ++KTG + YA + + S +
Sbjct: 10 LEHNLYETMSCLQRCS---KQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP 66
Query: 130 SAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCG 189
A+ VF + W M+ G+ + E ++ ++ M + +T S++ +C
Sbjct: 67 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS 126
Query: 190 NLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTA 249
NL++ EE Q H G + V N+L++ Y G+ + H LF + D+VSW +
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186
Query: 250 LVSAYSQFGKAN-------------------------------ETIRLFESMLTHGLKPD 278
++ Y + GK + E ++LF M ++PD
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
Query: 279 KVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCI-IDLFSRAGRLEEA 334
V+ LS C++ +E+G I + K I + C+ ID++++ G +EEA
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTR--IRMDSVLGCVLIDMYAKCGEMEEA 301
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E++ ++F +++++ +WT++ISG +G REAI F EM+ ++ + TF ++LTA
Sbjct: 298 MEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTA 357
Query: 87 CGGVMALQEGNQA-HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK-NVV 144
C ++EG +S K I +VD+ + + A+ +EM K N V
Sbjct: 358 CSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAV 417
Query: 145 SWTAML 150
W A+L
Sbjct: 418 IWGALL 423
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 179/314 (57%), Gaps = 2/314 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E++R F M+ERD +SW +MI G T N + +F+ M +E + D +TFGS+L A
Sbjct: 164 MEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
V L+ ++ H IK GF + +LV+ Y KC S+ +A + + ++++S
Sbjct: 224 SIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSC 283
Query: 147 TAMLVGYGQ-NGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
TA++ G+ Q N + +A IF DM + D+ + S++ C +AS+ G Q HG AL
Sbjct: 284 TALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFAL 343
Query: 206 VSGLISF-VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
S I F V + N+L+ +Y K G IED F EM KD SWT+L++ Y + G + I
Sbjct: 344 KSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAI 403
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
L+ M +KP+ VTF+ +LS CS T E G +I+++M +HGI ++H SCIID+
Sbjct: 404 DLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDM 463
Query: 325 FSRAGRLEEARDFI 338
+R+G LEEA I
Sbjct: 464 LARSGYLEEAYALI 477
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 178/331 (53%), Gaps = 4/331 (1%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
D YL G ++ +R+LF + +RD +SWT+MIS ++ G H +A+ +F+EM E ++
Sbjct: 55 DLYLKQGD---VKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKA 111
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
+Q+T+GS+L +C + L+EG Q H + K N+ SAL+ +Y +C ++ A F
Sbjct: 112 NQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQF 171
Query: 136 KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE 195
M +++VSW AM+ GY N ++ + +F M G PD FT GS++ + + LE
Sbjct: 172 DSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLE 231
Query: 196 EGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYS 255
++ HG+A+ G + +LV+ Y KCGS+ + +L +D +S TAL++ +S
Sbjct: 232 IVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFS 291
Query: 256 QFGK-ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPI 314
Q ++ +F+ M+ K D+V +L +C+ V G QI K I
Sbjct: 292 QQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFD 351
Query: 315 QDHYSCIIDLFSRAGRLEEARDFINQMLFRD 345
+ +ID+++++G +E+A +M +D
Sbjct: 352 VALGNSLIDMYAKSGEIEDAVLAFEEMKEKD 382
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 115/212 (54%), Gaps = 7/212 (3%)
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYS 159
H I GF N+ L+D+Y K VK A +F +S ++VVSWTAM+ + + GY
Sbjct: 35 HGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYH 94
Query: 160 EEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNAL 219
+A+ +F +M + V + FT GSV+ SC +L L+EG Q HG + V +AL
Sbjct: 95 PDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSAL 154
Query: 220 VSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDK 279
+SLY +CG +E+ F M +D VSW A++ Y+ A+ + LF+ MLT G KPD
Sbjct: 155 LSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDC 214
Query: 280 VTFIGVLSVCSRTRLVEKGNQIFESMTKEHGI 311
TF +L R +V K E +++ HG+
Sbjct: 215 FTFGSLL----RASIVVK---CLEIVSELHGL 239
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 85/150 (56%), Gaps = 5/150 (3%)
Query: 200 FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
HG ++ +G S + + + L+ LY K G ++ +LF ++ +D VSWTA++S +S+ G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 260 ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEH--GIIPIQDH 317
+ + LF+ M +K ++ T+ VL C +++G QI S+ K + G + ++
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVR-- 151
Query: 318 YSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
S ++ L++R G++EEAR + M RD V
Sbjct: 152 -SALLSLYARCGKMEEARLQFDSMKERDLV 180
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 181/313 (57%), Gaps = 1/313 (0%)
Query: 29 DSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACG 88
DSR+ F D ++ S +W+S+IS QN L +++ ++M + L D + S +C
Sbjct: 68 DSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCA 127
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
+ G H +KTG+ +++ GS+LVDMY KC + A +F EM +NVV+W+
Sbjct: 128 ILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSG 187
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
M+ GY Q G +EEA+ +F + + +D++ SVIS C N LE G Q HG+++ S
Sbjct: 188 MMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSS 247
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
S V ++LVSLY KCG E +++F+E+ K+ W A++ AY+Q + I LF+
Sbjct: 248 FDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFK 307
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
M G+KP+ +TF+ VL+ CS LV++G F+ M KE I P HY+ ++D+ RA
Sbjct: 308 RMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRA 366
Query: 329 GRLEEARDFINQM 341
GRL+EA + I M
Sbjct: 367 GRLQEALEVITNM 379
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 126/251 (50%), Gaps = 1/251 (0%)
Query: 95 EGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYG 154
+G Q H Y++K+G + L++ Y K + + F++ K+ +W++++ +
Sbjct: 33 KGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFA 92
Query: 155 QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT 214
QN +++ M + PDD L S SC L+ + G H +++ +G + V
Sbjct: 93 QNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVF 152
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
V ++LV +Y KCG I ++F EM ++ V+W+ ++ Y+Q G+ E + LF+ L
Sbjct: 153 VGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFEN 212
Query: 275 LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
L + +F V+SVC+ + L+E G QI ++ + S ++ L+S+ G E A
Sbjct: 213 LAVNDYSFSSVISVCANSTLLELGRQI-HGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGA 271
Query: 335 RDFINQMLFRD 345
N++ ++
Sbjct: 272 YQVFNEVPVKN 282
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 181/330 (54%), Gaps = 4/330 (1%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
+++ LF + E+D ISW+++I+ QNG EA+ VF +M + E + T +L AC
Sbjct: 215 KEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQAC 274
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
L++G + H I+ G + + +ALVDMY KC S + A VF + K+VVSW
Sbjct: 275 AAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWV 334
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQ-KYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
A++ G+ NG + +++ F M + PD + V+ SC L LE+ FH +
Sbjct: 335 ALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIK 394
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
G S + +LV LY +CGS+ + ++F+ + KD V WT+L++ Y GK + +
Sbjct: 395 YGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALET 454
Query: 267 FESMLTHG-LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
F M+ +KP++VTF+ +LS CS L+ +G +IF+ M ++ + P +HY+ ++DL
Sbjct: 455 FNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLL 514
Query: 326 SRAGRLEEARDFINQMLFRDS--VLMQLVG 353
R G L+ A + +M F + +L L+G
Sbjct: 515 GRVGDLDTAIEITKRMPFSPTPQILGTLLG 544
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 190/333 (57%), Gaps = 6/333 (1%)
Query: 18 YLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM-RSEMLETD 76
Y+ GR++ ++ ++F ++ + D ++W+SM+SG +NG +A++ FR M + + D
Sbjct: 106 YIKCGRMI---EALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPD 162
Query: 77 QYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK 136
+ T ++++AC + + G H ++I+ GF +++ ++L++ Y K R+ K A +FK
Sbjct: 163 RVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK 222
Query: 137 EMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE 196
++ K+V+SW+ ++ Y QNG + EA+ +F DM G P+ T+ V+ +C LE+
Sbjct: 223 MIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQ 282
Query: 197 GAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQ 256
G + H +A+ GL + V VS ALV +Y KC S E+ + +FS + KD VSW AL+S ++
Sbjct: 283 GRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTL 342
Query: 257 FGKANETIRLFESM-LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ 315
G A+ +I F M L + +PD + + VL CS +E+ + F S ++G
Sbjct: 343 NGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNP 401
Query: 316 DHYSCIIDLFSRAGRLEEARDFINQMLFRDSVL 348
+ +++L+SR G L A N + +D+V+
Sbjct: 402 FIGASLVELYSRCGSLGNASKVFNGIALKDTVV 434
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 165/321 (51%), Gaps = 3/321 (0%)
Query: 29 DSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACG 88
D+RQ+F +M +R W +++ ++ E + F M + + D +T L ACG
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 89 GVMALQEGNQAHSYIIK-TGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
+ + G H ++ K ++Y GS+L+ MY KC + A +F E+ ++V+W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 148 AMLVGYGQNGYSEEAVKIFCDM-QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
+M+ G+ +NG +AV+ F M V PD TL +++S+C L++ G HG +
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
G + +++ N+L++ Y K + ++ LF + KD +SW+ +++ Y Q G A E + +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
F M+ G +P+ T + VL C+ +E+G + E ++ G+ + ++D++
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDMYM 310
Query: 327 RAGRLEEARDFINQMLFRDSV 347
+ EEA +++ +D V
Sbjct: 311 KCFSPEEAYAVFSRIPRKDVV 331
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 8/255 (3%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEM-LETDQYTFGSMLTA 86
E++ +F + +D +SW ++ISG T NG+ +I+ F M E D +L +
Sbjct: 316 EEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGS 375
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + L++ HSY+IK GF N + G++LV++Y +C S+ +A VF ++ K+ V W
Sbjct: 376 CSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVW 435
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYG-VVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
T+++ GYG +G +A++ F M K V P++ T S++S+C + + EG + + +
Sbjct: 436 TSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMV 495
Query: 206 VS-GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK--DEVSWTAL-VSAYSQFGKAN 261
L + LV L G+ G ++ + M F ++ T L Q G+
Sbjct: 496 NDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMA 555
Query: 262 ETI--RLFESMLTHG 274
ET+ +LFE H
Sbjct: 556 ETVAKKLFELESNHA 570
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 5/172 (2%)
Query: 125 CRSVKS---AETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTL 181
CR S A +F EM+ +++ W +L + EE + F M + PD+FTL
Sbjct: 4 CRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTL 63
Query: 182 GSVISSCGNLASLEEGAQFHG-IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT 240
+ +CG L + G HG + L S + V ++L+ +Y KCG + + R+F E+
Sbjct: 64 PVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE 123
Query: 241 FKDEVSWTALVSAYSQFGKANETIRLFESM-LTHGLKPDKVTFIGVLSVCSR 291
D V+W+++VS + + G + + F M + + PD+VT I ++S C++
Sbjct: 124 KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTK 175
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 201 bits (512), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 179/348 (51%), Gaps = 32/348 (9%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
++F ++E+D +SW SMI+G Q G +A+++F++M SE ++ T +L+AC +
Sbjct: 187 KVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIR 246
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLV 151
L+ G Q SYI + N+ +A++DMY KC S++ A+ +F M K+ V+WT ML
Sbjct: 247 NLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLD 306
Query: 152 GYG-------------------------------QNGYSEEAVKIFCDMQ-KYGVVPDDF 179
GY QNG EA+ +F ++Q + + +
Sbjct: 307 GYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQI 366
Query: 180 TLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEM 239
TL S +S+C + +LE G H G+ V++AL+ +Y KCG +E +F+ +
Sbjct: 367 TLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV 426
Query: 240 TFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGN 299
+D W+A++ + G NE + +F M +KP+ VTF V CS T LV++
Sbjct: 427 EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAE 486
Query: 300 QIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+F M +GI+P + HY+CI+D+ R+G LE+A FI M S
Sbjct: 487 SLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPST 534
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 177/359 (49%), Gaps = 34/359 (9%)
Query: 20 VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSE-MLETDQY 78
L +E +R++F ++ + +S +W ++I +I F +M SE ++Y
Sbjct: 73 ALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKY 132
Query: 79 TFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM 138
TF ++ A V +L G H +K+ +++ ++L+ Y C + SA VF +
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 139 SYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGA 198
K+VVSW +M+ G+ Q G ++A+++F M+ V T+ V+S+C + +LE G
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 199 QFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWT---------- 248
Q + + +T++NA++ +Y KCGSIED RLF M KD V+WT
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 249 ---------------------ALVSAYSQFGKANETIRLFESM-LTHGLKPDKVTFIGVL 286
AL+SAY Q GK NE + +F + L +K +++T + L
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 287 SVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRD 345
S C++ +E G I S K+HGI S +I ++S+ G LE++R+ N + RD
Sbjct: 373 SACAQVGALELGRWI-HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRD 430
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 139/260 (53%), Gaps = 4/260 (1%)
Query: 91 MALQEGNQAHSYIIKTGFKDNIYAGSALVDMYC--KCRSVKSAETVFKEMSYKNVVSWTA 148
++L++ Q H ++I+TG + Y+ S L M S++ A VF E+ N +W
Sbjct: 41 VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNT 100
Query: 149 MLVGYGQNGYSEEAVKIFCDM-QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
++ Y ++ F DM + P+ +T +I + ++SL G HG+A+ S
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
+ S V V+N+L+ Y CG ++ ++F+ + KD VSW ++++ + Q G ++ + LF
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSR 327
+ M + +K VT +GVLS C++ R +E G Q+ S +E+ + + ++D++++
Sbjct: 221 KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC-SYIEENRVNVNLTLANAMLDMYTK 279
Query: 328 AGRLEEARDFINQMLFRDSV 347
G +E+A+ + M +D+V
Sbjct: 280 CGSIEDAKRLFDAMEEKDNV 299
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 180/317 (56%), Gaps = 5/317 (1%)
Query: 23 RLLMIEDSRQLFCDMRERD-SISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
+ + +ED++++F ++ +RD S+ W ++++G +Q +A+ VF +MR E + ++T
Sbjct: 207 KFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTIT 266
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
S+L+A + G H +KTG +I +AL+DMY K + ++ A ++F+ M +
Sbjct: 267 SVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDER 326
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
++ +W ++L + G + + +F M G+ PD TL +V+ +CG LASL +G + H
Sbjct: 327 DLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIH 386
Query: 202 GIALVSGLISFVT----VSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQF 257
G +VSGL++ + + N+L+ +Y KCG + D +F M KD SW +++ Y
Sbjct: 387 GYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQ 446
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH 317
+ +F M G+KPD++TF+G+L CS + + +G M + I+P DH
Sbjct: 447 SCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDH 506
Query: 318 YSCIIDLFSRAGRLEEA 334
Y+C+ID+ RA +LEEA
Sbjct: 507 YACVIDMLGRADKLEEA 523
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 168/314 (53%), Gaps = 7/314 (2%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
ERD + ++ISG NG +A++ +REMR+ + D+YTF S+L M L + +
Sbjct: 123 ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKK 181
Query: 99 AHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK-NVVSWTAMLVGYGQNG 157
H K GF + Y GS LV Y K SV+ A+ VF E+ + + V W A++ GY Q
Sbjct: 182 VHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIF 241
Query: 158 YSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSN 217
E+A+ +F M++ GV T+ SV+S+ ++ G HG+A+ +G S + VSN
Sbjct: 242 RFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSN 301
Query: 218 ALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKP 277
AL+ +YGK +E+ + +F M +D +W +++ + G + T+ LFE ML G++P
Sbjct: 302 ALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRP 361
Query: 278 DKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH----YSCIIDLFSRAGRLEE 333
D VT VL C R + +G +I M G++ + ++ ++D++ + G L +
Sbjct: 362 DIVTLTTVLPTCGRLASLRQGREIHGYMIVS-GLLNRKSSNEFIHNSLMDMYVKCGDLRD 420
Query: 334 ARDFINQMLFRDSV 347
AR + M +DS
Sbjct: 421 ARMVFDSMRVKDSA 434
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 134/266 (50%), Gaps = 5/266 (1%)
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGF-KDNIYAGSALVDMYCKCRSVKSAETVFKEMSY 140
+ L C G Q H ++++ GF D+ AG++LV+MY KC ++ A VF S
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SE 123
Query: 141 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
++V + A++ G+ NG +A++ + +M+ G++PD +T S++ + L + +
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKV 182
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDE-VSWTALVSAYSQFGK 259
HG+A G S V + LV+ Y K S+ED ++F E+ +D+ V W ALV+ YSQ +
Sbjct: 183 HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFR 242
Query: 260 ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYS 319
+ + +F M G+ + T VLS + + ++ G I K I +
Sbjct: 243 FEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVS-N 301
Query: 320 CIIDLFSRAGRLEEARDFINQMLFRD 345
+ID++ ++ LEEA M RD
Sbjct: 302 ALIDMYGKSKWLEEANSIFEAMDERD 327
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 130/265 (49%), Gaps = 12/265 (4%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
G+ +E++ +F M ERD +W S++ G H + +F M + D T
Sbjct: 308 GKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLT 367
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGF----KDNIYAGSALVDMYCKCRSVKSAETVFKE 137
++L CG + +L++G + H Y+I +G N + ++L+DMY KC ++ A VF
Sbjct: 368 TVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDS 427
Query: 138 MSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG 197
M K+ SW M+ GYG E A+ +F M + GV PD+ T ++ +C + L EG
Sbjct: 428 MRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEG 487
Query: 198 AQFHGIALVSGLISFVTVSN---ALVSLYGKCGSIEDCHRL-FSEMTFKDEVSWTALVSA 253
F +A + + + + S+ ++ + G+ +E+ + L S+ + V W +++S+
Sbjct: 488 RNF--LAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSS 545
Query: 254 YSQFGKANETIRLFESMLTHGLKPD 278
G N+ + L H L+P+
Sbjct: 546 CRLHG--NKDLALVAGKRLHELEPE 568
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 178/305 (58%), Gaps = 3/305 (0%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
+R+ ++W S+IS G+ +A+ +FR+M ++ ++ D +T S ++AC + G Q
Sbjct: 367 DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQ 426
Query: 99 AHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGY 158
H ++I+T D + ++L+DMY K SV SA TVF ++ +++VV+W +ML G+ QNG
Sbjct: 427 IHGHVIRTDVSDE-FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGN 485
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNA 218
S EA+ +F M + ++ T +VI +C ++ SLE+G H ++SGL T A
Sbjct: 486 SVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFT-DTA 544
Query: 219 LVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPD 278
L+ +Y KCG + +F M+ + VSW+++++AY G+ I F M+ G KP+
Sbjct: 545 LIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPN 604
Query: 279 KVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFI 338
+V F+ VLS C + VE+G F M K G+ P +H++C IDL SR+G L+EA I
Sbjct: 605 EVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTI 663
Query: 339 NQMLF 343
+M F
Sbjct: 664 KEMPF 668
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 181/324 (55%), Gaps = 7/324 (2%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ D+ ++F M RD ++W++++S C +NG +A+ +F+ M + +E D T S++
Sbjct: 152 LSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEG 211
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + L+ H I + F + ++L+ MY KC + S+E +F++++ KN VSW
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSW 271
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
TAM+ Y + +SE+A++ F +M K G+ P+ TL SV+SSCG + + EG HG A+
Sbjct: 272 TAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVR 331
Query: 207 SGL-ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
L ++ ++S ALV LY +CG + DC + ++ ++ V+W +L+S Y+ G + +
Sbjct: 332 RELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALG 391
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY--SCIID 323
LF M+T +KPD T +S C LV G QI + + + D + + +ID
Sbjct: 392 LFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIR----TDVSDEFVQNSLID 447
Query: 324 LFSRAGRLEEARDFINQMLFRDSV 347
++S++G ++ A NQ+ R V
Sbjct: 448 MYSKSGSVDSASTVFNQIKHRSVV 471
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 161/320 (50%), Gaps = 6/320 (1%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
+SY +G + SR +F DS + +I L AID++ + SE +
Sbjct: 42 ESYAFMGS---PDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQI 98
Query: 76 DQYTFGSMLTACGGVMA-LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETV 134
++ F S+L AC G L G + H IIK G D+ ++L+ MY + ++ AE V
Sbjct: 99 SKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKV 158
Query: 135 FKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASL 194
F M +++V+W+ ++ +NG +A+++F M GV PD T+ SV+ C L L
Sbjct: 159 FDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCL 218
Query: 195 EEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAY 254
HG T+ N+L+++Y KCG + R+F ++ K+ VSWTA++S+Y
Sbjct: 219 RIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY 278
Query: 255 SQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPI 314
++ + + +R F M+ G++P+ VT VLS C L+ +G + + + P
Sbjct: 279 NRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE-LDPN 337
Query: 315 QDHYS-CIIDLFSRAGRLEE 333
+ S +++L++ G+L +
Sbjct: 338 YESLSLALVELYAECGKLSD 357
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 129/228 (56%), Gaps = 2/228 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++ + +F ++ R ++W SM+ G +QNG EAI +F M LE ++ TF +++ A
Sbjct: 455 VDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQA 514
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + +L++G H +I +G KD ++ +AL+DMY KC + +AETVF+ MS +++VSW
Sbjct: 515 CSSIGSLEKGKWVHHKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSW 573
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
++M+ YG +G A+ F M + G P++ +V+S+CG+ S+EEG + +
Sbjct: 574 SSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS 633
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSA 253
G+ + L + G +++ +R EM F + S W +LV+
Sbjct: 634 FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 681
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 104/214 (48%), Gaps = 2/214 (0%)
Query: 97 NQAHSYIIKTG-FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQ 155
+Q H++++ TG + + + L++ Y S S+ VF+ Y + + ++
Sbjct: 18 SQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVW 77
Query: 156 NGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSC-GNLASLEEGAQFHGIALVSGLISFVT 214
+ A+ ++ + F SV+ +C G+ L G + HG + G+
Sbjct: 78 CHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAV 137
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
+ +L+ +YG+ G++ D ++F M +D V+W+ LVS+ + G+ + +R+F+ M+ G
Sbjct: 138 IETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDG 197
Query: 275 LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKE 308
++PD VT I V+ C+ + + +T++
Sbjct: 198 VEPDAVTMISVVEGCAELGCLRIARSVHGQITRK 231
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 181/327 (55%), Gaps = 13/327 (3%)
Query: 31 RQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR-SEMLETDQYTFGSMLTACGG 89
R++F M +R W +MI+G +QN +EA+ +F M S L + T ++ AC
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
A H +++K G + + + L+DMY + + A +F +M +++V+W M
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 477
Query: 150 LVGYGQNGYSEEAVKIFCDMQ-----------KYGVVPDDFTLGSVISSCGNLASLEEGA 198
+ GY + + E+A+ + MQ + + P+ TL +++ SC L++L +G
Sbjct: 478 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 537
Query: 199 QFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFG 258
+ H A+ + L + V V +ALV +Y KCG ++ ++F ++ K+ ++W ++ AY G
Sbjct: 538 EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHG 597
Query: 259 KANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY 318
E I L M+ G+KP++VTFI V + CS + +V++G +IF M ++G+ P DHY
Sbjct: 598 NGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHY 657
Query: 319 SCIIDLFSRAGRLEEARDFINQMLFRD 345
+C++DL RAGR++EA +N M+ RD
Sbjct: 658 ACVVDLLGRAGRIKEAYQLMN-MMPRD 683
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 176/345 (51%), Gaps = 16/345 (4%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
G+L + S+ L RD ++W +++S QN EA++ REM E +E D++T
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTG-FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY 140
S+L AC + L+ G + H+Y +K G +N + GSALVDMYC C+ V S VF M
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD 366
Query: 141 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQK-YGVVPDDFTLGSVISSCGNLASLEEGAQ 199
+ + W AM+ GY QN + +EA+ +F M++ G++ + T+ V+ +C +
Sbjct: 367 RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA 426
Query: 200 FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
HG + GL V N L+ +Y + G I+ R+F +M +D V+W +++ Y F +
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV-FSE 485
Query: 260 ANETIRL-------FESMLTHG-----LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK 307
+E L E ++ G LKP+ +T + +L C+ + KG +I K
Sbjct: 486 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 545
Query: 308 EHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLMQLV 352
+ + S ++D++++ G L+ +R +Q+ ++ + ++
Sbjct: 546 NNLATDVAVG-SALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVI 589
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 160/323 (49%), Gaps = 11/323 (3%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
++F + ER+ +SW S+IS A++ FR M E +E +T S++TAC +
Sbjct: 154 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213
Query: 92 ---ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
L G Q H+Y ++ G + N + + LV MY K + S++ + +++V+W
Sbjct: 214 MPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 272
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
+L QN EA++ +M GV PD+FT+ SV+ +C +L L G + H AL +G
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 209 LI---SFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
+ SF V +ALV +Y C + R+F M + W A+++ YSQ E +
Sbjct: 333 SLDENSF--VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390
Query: 266 LFESM-LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
LF M + GL + T GV+ C R+ + I + K G+ + + ++D+
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMDM 449
Query: 325 FSRAGRLEEARDFINQMLFRDSV 347
+SR G+++ A +M RD V
Sbjct: 450 YSRLGKIDIAMRIFGKMEDRDLV 472
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 143/305 (46%), Gaps = 7/305 (2%)
Query: 45 WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYII 104
W ++ ++ L REA+ + +M ++ D Y F ++L A + ++ G Q H+++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 105 KTGFK-DNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAV 163
K G+ D++ + LV++Y KC + VF +S +N VSW +++ E A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 164 KIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE---GAQFHGIALVSG-LISFVTVSNAL 219
+ F M V P FTL SV+++C NL E G Q H L G L SF+ N L
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTL 242
Query: 220 VSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDK 279
V++YGK G + L +D V+W ++S+ Q + E + M+ G++PD+
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 280 VTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFIN 339
T VL CS ++ G ++ K + S ++D++ ++ R +
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 340 QMLFR 344
M R
Sbjct: 363 GMFDR 367
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 2/171 (1%)
Query: 127 SVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVIS 186
+V A ++F S ++ W +L ++ EAV + DM G+ PD++ +++
Sbjct: 47 AVSGAPSIFISQS-RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLK 105
Query: 187 SCGNLASLEEGAQFHGIALVSGL-ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEV 245
+ +L +E G Q H G + VTV+N LV+LY KCG +++F ++ +++V
Sbjct: 106 AVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQV 165
Query: 246 SWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVE 296
SW +L+S+ F K + F ML ++P T + V++ CS + E
Sbjct: 166 SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 198 bits (503), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 182/333 (54%), Gaps = 7/333 (2%)
Query: 18 YLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQ 77
YL GR+ +++R +F M RD I+WT MI+G T++G A+++ R M+ E + +
Sbjct: 263 YLKCGRM---DEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNA 319
Query: 78 YTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE 137
T S+++ CG + + +G H + ++ +I ++L+ MY KC+ V VF
Sbjct: 320 VTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSG 379
Query: 138 MSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG 197
S + W+A++ G QN +A+ +F M++ V P+ TL S++ + LA L +
Sbjct: 380 ASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQA 439
Query: 198 AQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFS----EMTFKDEVSWTALVSA 253
H +G +S + + LV +Y KCG++E H++F+ + KD V W AL+S
Sbjct: 440 MNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISG 499
Query: 254 YSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIP 313
Y G + +++F M+ G+ P+++TF L+ CS + LVE+G +F M + + +
Sbjct: 500 YGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLA 559
Query: 314 IQDHYSCIIDLFSRAGRLEEARDFINQMLFRDS 346
+HY+CI+DL RAGRL+EA + I + F +
Sbjct: 560 RSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPT 592
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 173/337 (51%), Gaps = 10/337 (2%)
Query: 12 IRKW---DSYLVLGRLLM------IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAI 62
+R W D Y+ L M +E +R +F M+ RD ISW +MISG +NG +A+
Sbjct: 144 LRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDAL 203
Query: 63 DVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMY 122
+F M +E ++ D T SML CG + L+ G H + + D I +ALV+MY
Sbjct: 204 MMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMY 263
Query: 123 CKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLG 182
KC + A VF M ++V++WT M+ GY ++G E A+++ MQ GV P+ T+
Sbjct: 264 LKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIA 323
Query: 183 SVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK 242
S++S CG+ + +G HG A+ + S + + +L+S+Y KC ++ C R+FS +
Sbjct: 324 SLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKY 383
Query: 243 DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIF 302
W+A+++ Q ++ + LF+ M ++P+ T +L + + + I
Sbjct: 384 HTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIH 443
Query: 303 ESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFIN 339
+TK G + D + ++ ++S+ G LE A N
Sbjct: 444 CYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFN 479
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 153/298 (51%), Gaps = 9/298 (3%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLE--TDQYTFGSML 84
I +R+LF +M + +S+ +I + GL+ +AI VF M SE ++ D YT+ +
Sbjct: 65 ITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVA 124
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV 144
A G + +++ G H I+++ F + Y +AL+ MY V+ A VF M ++V+
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
SW M+ GY +NGY +A+ +F M V D T+ S++ CG+L LE G H +
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV 244
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
L + V NALV++Y KCG +++ +F M +D ++WT +++ Y++ G +
Sbjct: 245 EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENAL 304
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
L M G++P+ VT ++SVC V G + HG Q YS II
Sbjct: 305 ELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCL-------HGWAVRQQVYSDII 355
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 140/287 (48%), Gaps = 6/287 (2%)
Query: 63 DVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMY 122
+V R + + QY S+L ++ + H ++I TG + + + S L Y
Sbjct: 3 EVLRRANNALSSVKQYQ--SLLNHFAATQSISKTKALHCHVI-TGGRVSGHILSTLSVTY 59
Query: 123 CKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGV--VPDDFT 180
C + A +F+EM +++S+ ++ Y + G +A+ +F M GV VPD +T
Sbjct: 60 ALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYT 119
Query: 181 LGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT 240
V + G L S++ G HG L S V NAL+++Y G +E +F M
Sbjct: 120 YPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMK 179
Query: 241 FKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQ 300
+D +SW ++S Y + G N+ + +F+ M+ + D T + +L VC + +E G
Sbjct: 180 NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRN 239
Query: 301 IFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ + + +E + + + +++++ + GR++EAR ++M RD +
Sbjct: 240 VHK-LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVI 285
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 198 bits (503), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 174/329 (52%), Gaps = 4/329 (1%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+R L + +W + G + + E+I V+ EM+ ++ ++ TF +L AC
Sbjct: 66 ARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACAS 125
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
+ L G Q ++K GF ++Y G+ L+ +Y C+ A VF EM+ +NVVSW ++
Sbjct: 126 FLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSI 185
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
+ +NG + FC+M PD+ T+ ++S+CG SL G H +V L
Sbjct: 186 MTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSL--GKLVHSQVMVREL 243
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFES 269
+ ALV +Y K G +E +F M K+ +W+A++ +Q+G A E ++LF
Sbjct: 244 ELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSK 303
Query: 270 MLTH-GLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
M+ ++P+ VTF+GVL CS T LV+ G + F M K H I P+ HY ++D+ RA
Sbjct: 304 MMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRA 363
Query: 329 GRLEEARDFINQMLFR-DSVLMQLVGQPC 356
GRL EA DFI +M F D+V+ + + C
Sbjct: 364 GRLNEAYDFIKKMPFEPDAVVWRTLLSAC 392
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 128/230 (55%), Gaps = 5/230 (2%)
Query: 29 DSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACG 88
D+R++F +M ER+ +SW S+++ +NG + F EM + D+ T +L+ACG
Sbjct: 166 DARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG 225
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
G ++L G HS ++ + N G+ALVDMY K ++ A VF+ M KNV +W+A
Sbjct: 226 GNLSL--GKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSA 283
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVV-PDDFTLGSVISSCGNLASLEEGAQ-FHGIALV 206
M+VG Q G++EEA+++F M K V P+ T V+ +C + +++G + FH + +
Sbjct: 284 MIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKI 343
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYS 255
+ + A+V + G+ G + + + +M F+ D V W L+SA S
Sbjct: 344 HKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACS 393
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 197 bits (502), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 168/305 (55%), Gaps = 5/305 (1%)
Query: 34 FCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMAL 93
+CD+ ++S +SG + G +E +DV R+ +E + T+ S L + L
Sbjct: 199 YCDLS-----VFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDL 253
Query: 94 QEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGY 153
Q HS +++ GF + A AL++MY KC V A+ VF + +N+ T ++ Y
Sbjct: 254 NLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAY 313
Query: 154 GQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFV 213
Q+ EEA+ +F M V P+++T +++S L+ L++G HG+ L SG + V
Sbjct: 314 FQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHV 373
Query: 214 TVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTH 273
V NALV++Y K GSIED + FS MTF+D V+W ++S S G E + F+ M+
Sbjct: 374 MVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFT 433
Query: 274 GLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEE 333
G P+++TFIGVL CS VE+G F + K+ + P HY+CI+ L S+AG ++
Sbjct: 434 GEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKD 493
Query: 334 ARDFI 338
A DF+
Sbjct: 494 AEDFM 498
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 155/323 (47%), Gaps = 10/323 (3%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR-SEMLETDQYTFGSMLTACG 88
+R+LF M ER+ +SW +M+ G +G E + +F+ M S +++ + +C
Sbjct: 88 ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCS 147
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
++EG Q H +K G + + + LV MY C A V ++ Y ++ +++
Sbjct: 148 NSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSS 207
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
L GY + G +E + + V ++ T S + NL L Q H + G
Sbjct: 208 ALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFG 267
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
+ V AL+++YGKCG + R+F + ++ T ++ AY Q E + LF
Sbjct: 268 FNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFS 327
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGN----QIFESMTKEHGIIPIQDHYSCIIDL 324
M T + P++ TF +L+ + L+++G+ + +S + H ++ + ++++
Sbjct: 328 KMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVG-----NALVNM 382
Query: 325 FSRAGRLEEARDFINQMLFRDSV 347
++++G +E+AR + M FRD V
Sbjct: 383 YAKSGSIEDARKAFSGMTFRDIV 405
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 131/278 (47%), Gaps = 9/278 (3%)
Query: 80 FGSMLTACGGVMALQEGNQAHSYIIKTG---FKDNIYAGSALVDMYCKCRSVKSAETVFK 136
+L C L+ G H+++I T ++ Y ++L+++Y KCR A +F
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 137 EMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYG-VVPDDFTLGSVISSCGNLASLE 195
M +NVVSW AM+ GY +G+ E +K+F M G P++F V SC N +E
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 196 EGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYS 255
EG QFHG L GLIS V N LV +Y C + R+ ++ + D +++ +S Y
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 256 QFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ 315
+ G E + + + +T++ L + S R + Q+ M + G
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR-FGFNAEV 272
Query: 316 DHYSCIIDLFSRAGRLEEAR----DFINQMLFRDSVLM 349
+ +I+++ + G++ A+ D Q +F ++ +M
Sbjct: 273 EACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIM 310
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 120/226 (53%), Gaps = 2/226 (0%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
++++F D ++ T+++ Q+ EA+++F +M ++ + ++YTF +L +
Sbjct: 291 AQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAE 350
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
+ L++G+ H ++K+G+++++ G+ALV+MY K S++ A F M+++++V+W M
Sbjct: 351 LSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTM 410
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIALVSG 208
+ G +G EA++ F M G +P+ T V+ +C ++ +E+G F+ +
Sbjct: 411 ISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFD 470
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSA 253
+ + +V L K G +D + D V+W L++A
Sbjct: 471 VQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
IED+R+ F M RD ++W +MISGC+ +GL REA++ F M ++ TF +L A
Sbjct: 389 IEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQA 448
Query: 87 CGGVMALQEGNQAHSYIIKT-GFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK-NVV 144
C + +++G + ++K + +I + +V + K K AE + + +VV
Sbjct: 449 CSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVV 508
Query: 145 SWTAML 150
+W +L
Sbjct: 509 AWRTLL 514
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 169/297 (56%)
Query: 45 WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYII 104
W SM+SG N + A+ + ++ L D YT L C + L+ G Q HS ++
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVV 369
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVK 164
+G++ + GS LVD++ +++ A +F + K++++++ ++ G ++G++ A
Sbjct: 370 VSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFY 429
Query: 165 IFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYG 224
+F ++ K G+ D F + +++ C +LASL G Q HG+ + G S + ALV +Y
Sbjct: 430 LFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYV 489
Query: 225 KCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIG 284
KCG I++ LF M +D VSWT ++ + Q G+ E R F M+ G++P+KVTF+G
Sbjct: 490 KCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLG 549
Query: 285 VLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+LS C + L+E+ E+M E+G+ P +HY C++DL +AG +EA + IN+M
Sbjct: 550 LLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKM 606
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 147/283 (51%), Gaps = 3/283 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I+D+ +LF + +D I+++ +I GC ++G + A +FRE+ L+ DQ+ ++L
Sbjct: 393 IQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKV 452
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + +L G Q H IK G++ +ALVDMY KC + + +F M ++VVSW
Sbjct: 453 CSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSW 512
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG-AQFHGIAL 205
T ++VG+GQNG EEA + F M G+ P+ T ++S+C + LEE + +
Sbjct: 513 TGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKS 572
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFGKANETI 264
GL ++ +V L G+ G ++ + L ++M + D+ WT+L++A A
Sbjct: 573 EYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVT 632
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK 307
+ E +L G D + + + + + ++ +++ E+ K
Sbjct: 633 VIAEKLLK-GFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKK 674
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 161/328 (49%), Gaps = 11/328 (3%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
+++++ LF M + + +SW +ISG G R A++ M+ E L D + L
Sbjct: 188 LMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLK 246
Query: 86 AC--GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY--- 140
AC GG++ + G Q H ++K+G + + +A SAL+DMY C S+ A VF +
Sbjct: 247 ACSFGGLLTM--GKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 141 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
+V W +ML G+ N +E A+ + + + + D +TL + C N +L G Q
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV 364
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKA 260
H + +VSG V + LV L+ G+I+D H+LF + KD ++++ L+ + G
Sbjct: 365 HSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFN 424
Query: 261 NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFE-SMTKEHGIIPIQDHYS 319
+ LF ++ GL D+ +L VCS + G QI + K + P+ +
Sbjct: 425 SLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTA--T 482
Query: 320 CIIDLFSRAGRLEEARDFINQMLFRDSV 347
++D++ + G ++ + ML RD V
Sbjct: 483 ALVDMYVKCGEIDNGVVLFDGMLERDVV 510
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 161/363 (44%), Gaps = 49/363 (13%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM-RSEMLETDQYTFGSML 84
++ D+ ++F +M ER+ ++WT+M+SG T +G +AI+++R M SE +++ + ++L
Sbjct: 55 LLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVL 114
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDM----------------------- 121
ACG V +Q G + I K + ++ +++VDM
Sbjct: 115 KACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSST 174
Query: 122 --------YCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYG 173
YCK + A T+F M NVVSW ++ G+ G S A++ MQ+ G
Sbjct: 175 SWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREG 233
Query: 174 VVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCH 233
+V D F L + +C L G Q H + SGL S +AL+ +Y CGS+
Sbjct: 234 LVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAA 293
Query: 234 RLFSEMTFKDEVS---WTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCS 290
+F + S W +++S + + + L + L D T G L +C
Sbjct: 294 DVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICI 353
Query: 291 RTRLVEKGNQIFESMTKEHGIIPIQDHY------SCIIDLFSRAGRLEEARDFINQMLFR 344
+ G Q+ H ++ + + S ++DL + G +++A +++ +
Sbjct: 354 NYVNLRLGLQV-------HSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNK 406
Query: 345 DSV 347
D +
Sbjct: 407 DII 409
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 122/288 (42%), Gaps = 32/288 (11%)
Query: 84 LTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV 143
L CG V A + G +++IK G N++ + ++ MY R + A VF EMS +N+
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDM-QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
V+WT M+ GY +G +A++++ M ++F +V+ +CG + ++ G +
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
L V + N++V +Y K G + + + F E+ SW L+S Y + G +E
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 263 TIRLFESMLT------------------------------HGLKPDKVTFIGVLSVCSRT 292
+ LF M GL D L CS
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFG 251
Query: 293 RLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQ 340
L+ G Q+ + K G+ S +ID++S G L A D +Q
Sbjct: 252 GLLTMGKQLHCCVVKS-GLESSPFAISALIDMYSNCGSLIYAADVFHQ 298
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 6/158 (3%)
Query: 188 CGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSW 247
CG + + + G + G+ V ++N ++S+Y + D H++F EM+ ++ V+W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 248 TALVSAYSQFGKANETIRLFESML-THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMT 306
T +VS Y+ GK N+ I L+ ML + ++ + VL C ++ G ++E +
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 307 KEH--GIIPIQDHYSCIIDLFSRAGRLEEARDFINQML 342
KE+ G + + + ++D++ + GRL EA ++L
Sbjct: 135 KENLRGDVVLMN---SVVDMYVKNGRLIEANSSFKEIL 169
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 181/321 (56%), Gaps = 1/321 (0%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
+L +E ++++F ++ R+S+ W ++ G + E +F MR L D T
Sbjct: 155 AQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLI 214
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNI-YAGSALVDMYCKCRSVKSAETVFKEMSY 140
++ ACG V A + G H I+ F D Y ++++DMY KCR + +A +F+
Sbjct: 215 CLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVD 274
Query: 141 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
+NVV WT ++ G+ + + EA +F M + ++P+ TL +++ SC +L SL G
Sbjct: 275 RNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSV 334
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKA 260
HG + +G+ + + +Y +CG+I+ +F M ++ +SW+++++A+ G
Sbjct: 335 HGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLF 394
Query: 261 NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC 320
E + F M + + P+ VTF+ +LS CS + V++G + FESMT+++G++P ++HY+C
Sbjct: 395 EEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYAC 454
Query: 321 IIDLFSRAGRLEEARDFINQM 341
++DL RAG + EA+ FI+ M
Sbjct: 455 MVDLLGRAGEIGEAKSFIDNM 475
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 161/315 (51%), Gaps = 10/315 (3%)
Query: 39 ERDSISWTSMISGCTQNGL--HREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEG 96
+R+ SW +++SG +++ + + + ++ MR D + + AC G+ L+ G
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 97 NQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQN 156
H +K G + Y +LV+MY + +++SA+ VF E+ +N V W ++ GY +
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
E ++FC M+ G+ D TL ++ +CGN+ + + G HG+++ SF+ S
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRR---SFIDQS 245
Query: 217 N----ALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLT 272
+ +++ +Y KC +++ +LF ++ V WT L+S +++ +A E LF ML
Sbjct: 246 DYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLR 305
Query: 273 HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLE 332
+ P++ T +L CS + G + M + +GI +++ ID+++R G ++
Sbjct: 306 ESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIR-NGIEMDAVNFTSFIDMYARCGNIQ 364
Query: 333 EARDFINQMLFRDSV 347
AR + M R+ +
Sbjct: 365 MARTVFDMMPERNVI 379
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 8/273 (2%)
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS-- 139
++LT L Q H+ +I GF+D + GS+L + Y + + A + F +
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 140 YKNVVSWTAMLVGYGQNG---YSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE 196
+N SW +L GY ++ YS + + ++ M+++ D F L I +C L LE
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYS-DVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLEN 127
Query: 197 GAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQ 256
G HG+A+ +GL V+ +LV +Y + G++E ++F E+ ++ V W L+ Y +
Sbjct: 128 GILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLK 187
Query: 257 FGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQD 316
+ K E RLF M GL D +T I ++ C K + ++ I D
Sbjct: 188 YSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNV-FAGKVGKCVHGVSIRRSFIDQSD 246
Query: 317 HY-SCIIDLFSRAGRLEEARDFINQMLFRDSVL 348
+ + IID++ + L+ AR + R+ V+
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVM 279
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 176/339 (51%), Gaps = 34/339 (10%)
Query: 42 SISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQE--GNQA 99
++SWTS I+ T+NG EA F +M +E + TF ++L+ CG + E G+
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 100 HSYIIKTGF-KDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN---------------- 142
H Y K G ++++ G+A++ MY K K A VF M KN
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 143 ---------------VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISS 187
++SWTAM+ G+ + GY EEA+ F +MQ GV PD + + +++
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 188 CGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSW 247
C NL +L G H L + V VSN+L+ LY +CG +E ++F M + VSW
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 248 TALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK 307
+++ ++ G A+E++ F M G KPD VTF G L+ CS LVE+G + F+ M
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKC 335
Query: 308 EHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDS 346
++ I P +HY C++DL+SRAGRLE+A + M + +
Sbjct: 336 DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPN 374
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 141/260 (54%), Gaps = 8/260 (3%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
D Y+ G+ ++++ ++F M ERD ISWT+MI+G + G EA+ FREM+ ++
Sbjct: 148 DGYMRSGQ---VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKP 204
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
D + L AC + AL G H Y++ FK+N+ ++L+D+YC+C V+ A VF
Sbjct: 205 DYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 264
Query: 136 KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE 195
M + VVSW +++VG+ NG + E++ F MQ+ G PD T +++C ++ +E
Sbjct: 265 YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVE 324
Query: 196 EGAQFHGIALVSGLISF-VTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSA 253
EG ++ I IS + LV LY + G +ED +L M K +EV +L++A
Sbjct: 325 EGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAA 384
Query: 254 YSQFGKANETIRLFESMLTH 273
S G I L E ++ H
Sbjct: 385 CSNHG---NNIVLAERLMKH 401
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 35/241 (14%)
Query: 141 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE--GA 198
+ VSWT+ + +NG EA K F DM GV P+ T +++S CG+ S E G
Sbjct: 34 ETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGD 93
Query: 199 QFHGIALVSGL-ISFVTVSNALVSLYGK-------------------------------C 226
HG A GL + V V A++ +Y K
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 227 GSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVL 286
G +++ ++F +M +D +SWTA+++ + + G E + F M G+KPD V I L
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 287 SVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDS 346
+ C+ + G + + + ++ S +IDL+ R G +E AR M R
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNS-LIDLYCRCGCVEFARQVFYNMEKRTV 272
Query: 347 V 347
V
Sbjct: 273 V 273
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 167/307 (54%), Gaps = 2/307 (0%)
Query: 45 WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYII 104
W +++ ++ +AI V+ M + D+Y+ ++ A + G + HS +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVK 164
+ GF + + S + +YCK ++A VF E + + SW A++ G G + EAV+
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 165 IFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL--ISFVTVSNALVSL 222
+F DM++ G+ PDDFT+ SV +SCG L L Q H L + S + + N+L+ +
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 223 YGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTF 282
YGKCG ++ +F EM ++ VSW++++ Y+ G E + F M G++P+K+TF
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITF 324
Query: 283 IGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQML 342
+GVLS C LVE+G F M E + P HY CI+DL SR G+L+EA+ + +M
Sbjct: 325 VGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP 384
Query: 343 FRDSVLM 349
+ +V++
Sbjct: 385 MKPNVMV 391
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 130/239 (54%), Gaps = 12/239 (5%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
E++R++F + ER SW ++I G G EA+++F +M+ LE D +T S+ +C
Sbjct: 169 ENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASC 228
Query: 88 GGVMALQEGNQAHSYII--KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
GG+ L Q H ++ KT K +I ++L+DMY KC + A +F+EM +NVVS
Sbjct: 229 GGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVS 288
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGI-- 203
W++M+VGY NG + EA++ F M+++GV P+ T V+S+C + +EEG + +
Sbjct: 289 WSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMK 348
Query: 204 ---ALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEV-SWTALVSAYSQFG 258
L GL + +V L + G +++ ++ EM K V W L+ +FG
Sbjct: 349 SEFELEPGLSHY----GCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFG 403
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 82/152 (53%), Gaps = 11/152 (7%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
D Y GR+ + + +F +MR+R+ +SW+SMI G NG EA++ FR+MR +
Sbjct: 263 DMYGKCGRMDL---ASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRP 319
Query: 76 DQYTFGSMLTAC--GGVMALQEGNQAHSYIIKTGF--KDNIYAGSALVDMYCKCRSVKSA 131
++ TF +L+AC GG L E + + ++K+ F + + +VD+ + +K A
Sbjct: 320 NKITFVGVLSACVHGG---LVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEA 376
Query: 132 ETVFKEMSYK-NVVSWTAMLVGYGQNGYSEEA 162
+ V +EM K NV+ W ++ G + G E A
Sbjct: 377 KKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 194 bits (493), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 173/316 (54%), Gaps = 3/316 (0%)
Query: 23 RLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGS 82
R ++ E F +R + + G G +EA+ + + S L+ + T+
Sbjct: 57 RRMLAEKRIGRFQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAV 113
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN 142
+L C +G + H+ + GF N Y L+ +Y +++A +F+ + ++
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRD 173
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
++ W AM+ GY Q G +E + I+ DM++ +VPD +T SV +C L LE G + H
Sbjct: 174 LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHA 233
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
+ + + S + V +ALV +Y KC S D HR+F +++ ++ ++WT+L+S Y GK +E
Sbjct: 234 VMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSE 293
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
++ FE M G +P+ VTF+ VL+ C+ LV+KG + F SM +++GI P HY+ ++
Sbjct: 294 VLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMV 353
Query: 323 DLFSRAGRLEEARDFI 338
D RAGRL+EA +F+
Sbjct: 354 DTLGRAGRLQEAYEFV 369
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 131/251 (52%), Gaps = 6/251 (2%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMA 92
LF ++ RD I W +MISG Q GL +E + ++ +MR + DQYTF S+ AC +
Sbjct: 165 LFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDR 224
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
L+ G +AH+ +IK K NI SALVDMY KC S VF ++S +NV++WT+++ G
Sbjct: 225 LEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISG 284
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG-AQFHGIALVSGLIS 211
YG +G E +K F M++ G P+ T V+++C + +++G F+ + G+
Sbjct: 285 YGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEP 344
Query: 212 FVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSAYSQFGKANETIRLFESM 270
A+V G+ G +++ + + K+ W +L+ A G ++L E
Sbjct: 345 EGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG----NVKLLELA 400
Query: 271 LTHGLKPDKVT 281
T L+ D
Sbjct: 401 ATKFLELDPTN 411
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 194 bits (492), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 180/353 (50%), Gaps = 35/353 (9%)
Query: 27 IED---SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLE-TDQYTFGS 82
IED + +LF + + + S+I T N L+ + I +++++ + E D++TF
Sbjct: 55 IEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPF 114
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN 142
M +C + + G Q H ++ K G + ++ +AL+DMY K + A VF EM ++
Sbjct: 115 MFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERD 174
Query: 143 V-------------------------------VSWTAMLVGYGQNGYSEEAVKIFCDMQK 171
V VSWTAM+ GY G EA+ F +MQ
Sbjct: 175 VISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQL 234
Query: 172 YGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIED 231
G+ PD+ +L SV+ SC L SLE G H A G + V NAL+ +Y KCG I
Sbjct: 235 AGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQ 294
Query: 232 CHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSR 291
+LF +M KD +SW+ ++S Y+ G A+ I F M +KP+ +TF+G+LS CS
Sbjct: 295 AIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSH 354
Query: 292 TRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFR 344
+ ++G + F+ M +++ I P +HY C+ID+ +RAG+LE A + M +
Sbjct: 355 VGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMK 407
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 129/242 (53%), Gaps = 3/242 (1%)
Query: 15 WDSYLV-LGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEML 73
W+S L RL ++ ++ LF M ++ +SWT+MISG T G + EA+D FREM+ +
Sbjct: 178 WNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI 237
Query: 74 ETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAET 133
E D+ + S+L +C + +L+ G H Y + GF +AL++MY KC + A
Sbjct: 238 EPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQ 297
Query: 134 VFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLAS 193
+F +M K+V+SW+ M+ GY +G + A++ F +MQ+ V P+ T ++S+C ++
Sbjct: 298 LFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGM 357
Query: 194 LEEGAQFHGIALVSGLI-SFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALV 251
+EG ++ + I + L+ + + G +E + M K D W +L+
Sbjct: 358 WQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLL 417
Query: 252 SA 253
S+
Sbjct: 418 SS 419
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 33/290 (11%)
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
V + E + ++ II G + + + +VD K + A +F ++S NV + ++
Sbjct: 20 VKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSI 79
Query: 150 LVGYGQNGYSEEAVKIFCDM-QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
+ Y N + ++I+ + +K +PD FT + SC +L S G Q HG G
Sbjct: 80 IRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFG 139
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
V NAL+ +Y K + D H++F EM +D +SW +L+S Y++ G+ + LF
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 269 SMLTH-------------------------------GLKPDKVTFIGVLSVCSRTRLVEK 297
ML G++PD+++ I VL C++ +E
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLEL 259
Query: 298 GNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
G I + G + + +I+++S+ G + +A QM +D +
Sbjct: 260 GKWI-HLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVI 308
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 185/330 (56%), Gaps = 7/330 (2%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
GRL D+ +LF ++ +R ++WT++ SG T +G HREAID+F++M ++ D Y
Sbjct: 160 GRL---NDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIV 216
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
+L+AC V L G Y+ + + N + + LV++Y KC ++ A +VF M K
Sbjct: 217 QVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEK 276
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
++V+W+ M+ GY N + +E +++F M + + PD F++ +SSC +L +L+ G
Sbjct: 277 DIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW-- 334
Query: 202 GIALVSG--LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
GI+L+ ++ + ++NAL+ +Y KCG++ +F EM KD V A +S ++ G
Sbjct: 335 GISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGH 394
Query: 260 ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYS 319
+ +F G+ PD TF+G+L C L++ G + F +++ + + +HY
Sbjct: 395 VKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYG 454
Query: 320 CIIDLFSRAGRLEEARDFINQMLFRDSVLM 349
C++DL+ RAG L++A I M R + ++
Sbjct: 455 CMVDLWGRAGMLDDAYRLICDMPMRPNAIV 484
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 163/335 (48%), Gaps = 4/335 (1%)
Query: 19 LVLGRLLMIEDSRQ---LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
L+L R L ++ LF + + + S+I+G N L E +D+F +R L
Sbjct: 50 LLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYL 109
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
+TF +L AC + + G HS ++K GF ++ A ++L+ +Y + A +F
Sbjct: 110 HGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLF 169
Query: 136 KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE 195
E+ ++VV+WTA+ GY +G EA+ +F M + GV PD + + V+S+C ++ L+
Sbjct: 170 DEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLD 229
Query: 196 EGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYS 255
G + V LV+LY KCG +E +F M KD V+W+ ++ Y+
Sbjct: 230 SGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYA 289
Query: 256 QFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ 315
E I LF ML LKPD+ + +G LS C+ ++ G S+ H +
Sbjct: 290 SNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGI-SLIDRHEFLTNL 348
Query: 316 DHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLMQ 350
+ +ID++++ G + + +M +D V+M
Sbjct: 349 FMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMN 383
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 125/253 (49%), Gaps = 7/253 (2%)
Query: 98 QAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNG 157
Q H +I + + + L+ R K + +F + N+ + +++ G+ N
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNH 90
Query: 158 YSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSN 217
E + +F ++K+G+ FT V+ +C +S + G H + + G V
Sbjct: 91 LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMT 150
Query: 218 ALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKP 277
+L+S+Y G + D H+LF E+ + V+WTAL S Y+ G+ E I LF+ M+ G+KP
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKP 210
Query: 278 DKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH---YSCIIDLFSRAGRLEEA 334
D + VLS C ++ G I + M + + +Q + + +++L+++ G++E+A
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYMEE----MEMQKNSFVRTTLVNLYAKCGKMEKA 266
Query: 335 RDFINQMLFRDSV 347
R + M+ +D V
Sbjct: 267 RSVFDSMVEKDIV 279
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 168/309 (54%), Gaps = 1/309 (0%)
Query: 40 RDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQA 99
+D++++ ++ G TQ G +A DV++ M+ + D T ML C G+
Sbjct: 465 KDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCV 524
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY-KNVVSWTAMLVGYGQNGY 158
+ IIK GF + AL++M+ KC ++ +A +F + + K+ VSW M+ GY +G
Sbjct: 525 YGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQ 584
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNA 218
+EEAV F M+ P+ T +++ + L++L G H + G S V N+
Sbjct: 585 AEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNS 644
Query: 219 LVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPD 278
LV +Y KCG IE + F E++ K VSW ++SAY+ G A+ + LF SM + LKPD
Sbjct: 645 LVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPD 704
Query: 279 KVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFI 338
V+F+ VLS C LVE+G +IFE M + H I +HY+C++DL +AG EA + +
Sbjct: 705 SVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMM 764
Query: 339 NQMLFRDSV 347
+M + SV
Sbjct: 765 RRMRVKTSV 773
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 171/326 (52%), Gaps = 5/326 (1%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+RQ+F M +D ++W +M+SG QNG A+ +F +MRS ++ D + +++ A
Sbjct: 154 ARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSK 213
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYA-GSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
+ H +IK GF I+A S L+DMYC C + +AE+VF+E+ K+ SW
Sbjct: 214 LEKSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGT 270
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
M+ Y NG+ EE +++F M+ Y V + S + + + L +G H A+ G
Sbjct: 271 MMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQG 330
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
LI V+V+ +L+S+Y KCG +E +LF + +D VSW+A++++Y Q G+ +E I LF
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFR 390
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
M+ +KP+ VT VL C+ G I K I + + +I ++++
Sbjct: 391 DMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKA-DIESELETATAVISMYAKC 449
Query: 329 GRLEEARDFINQMLFRDSVLMQLVGQ 354
GR A ++ +D+V + Q
Sbjct: 450 GRFSPALKAFERLPIKDAVAFNALAQ 475
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 166/319 (52%), Gaps = 4/319 (1%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEM-LETDQYTFGSMLTACG 88
SR +F +R+ + W SMI G T+ GLHREA+ F M E ++ D+Y+F L AC
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
G M ++G + H I + G + ++Y G+ALV+MYCK R + SA VF +M K+VV+W
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNT 171
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
M+ G QNG S A+ +F DM+ V D +L ++I + L + HG+ + G
Sbjct: 172 MVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG 231
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
I S+ L+ +Y C + +F E+ KDE SW +++AY+ G E + LF+
Sbjct: 232 FI--FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFD 289
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
M + ++ +KV L + + KG I + ++ G+I + ++ ++S+
Sbjct: 290 LMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQ-GLIGDVSVATSLMSMYSKC 348
Query: 329 GRLEEARDFINQMLFRDSV 347
G LE A + RD V
Sbjct: 349 GELEIAEQLFINIEDRDVV 367
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 160/309 (51%), Gaps = 2/309 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E + QLF ++ +RD +SW++MI+ Q G H EAI +FR+M ++ + T S+L
Sbjct: 351 LEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQG 410
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C GV A + G H Y IK + + +A++ MY KC A F+ + K+ V++
Sbjct: 411 CAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAF 470
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
A+ GY Q G + +A ++ +M+ +GV PD T+ ++ +C + G+ +G +
Sbjct: 471 NALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIK 530
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF-KDEVSWTALVSAYSQFGKANETIR 265
G S V++AL++++ KC ++ LF + F K VSW +++ Y G+A E +
Sbjct: 531 HGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVA 590
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
F M +P+ VTF+ ++ + + G + S+ + G + ++D++
Sbjct: 591 TFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLI-QCGFCSQTPVGNSLVDMY 649
Query: 326 SRAGRLEEA 334
++ G +E +
Sbjct: 650 AKCGMIESS 658
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 164/319 (51%), Gaps = 1/319 (0%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+ +F ++ +D SW +M++ NG E +++F MR+ + ++ S L A
Sbjct: 253 AESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAY 312
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
V L +G H Y ++ G ++ ++L+ MY KC ++ AE +F + ++VVSW+AM
Sbjct: 313 VGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAM 372
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
+ Y Q G +EA+ +F DM + + P+ TL SV+ C +A+ G H A+ + +
Sbjct: 373 IASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADI 432
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFES 269
S + + A++S+Y KCG + F + KD V++ AL Y+Q G AN+ ++++
Sbjct: 433 ESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKN 492
Query: 270 MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAG 329
M HG+ PD T +G+L C+ +G+ ++ + K HG +I++F++
Sbjct: 493 MKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIK-HGFDSECHVAHALINMFTKCD 551
Query: 330 RLEEARDFINQMLFRDSVL 348
L A ++ F S +
Sbjct: 552 ALAAAIVLFDKCGFEKSTV 570
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 116/217 (53%), Gaps = 2/217 (0%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
E+ ++SW M++G +G EA+ FR+M+ E + + TF +++ A + AL+ G
Sbjct: 566 EKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMS 625
Query: 99 AHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGY 158
HS +I+ GF G++LVDMY KC ++S+E F E+S K +VSW ML Y +G
Sbjct: 626 VHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGL 685
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIALVSGLISFVTVSN 217
+ AV +F MQ+ + PD + SV+S+C + +EEG + F + + + V
Sbjct: 686 ASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYA 745
Query: 218 ALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSA 253
+V L GK G + + M K V W AL+++
Sbjct: 746 CMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNS 782
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 5/195 (2%)
Query: 98 QAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNG 157
Q H +I +G K + + L++ Y + + +F + VV W +M+ GY + G
Sbjct: 23 QVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 158 YSEEAVKIFCDM-QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
EA+ F M ++ G+ PD ++ + +C ++G + H + GL S V +
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLK 276
ALV +Y K + ++F +M KD V+W +VS +Q G ++ + LF M + +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 277 PDKVTFIGVLSVCSR 291
D V+ ++ S+
Sbjct: 199 IDHVSLYNLIPAVSK 213
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 171/315 (54%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+R +F M +D++SW S+ISG Q+G EA+ +F+ M + D T+ +++
Sbjct: 361 ARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTR 420
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
+ L+ G HS IK+G ++ +AL+DMY KC V + +F M + V+W +
Sbjct: 421 LADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTV 480
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
+ + G +++ M+K VVPD T + C +LA+ G + H L G
Sbjct: 481 ISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGY 540
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFES 269
S + + NAL+ +Y KCG +E+ R+F M+ +D V+WT ++ AY +G+ + + F
Sbjct: 541 ESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFAD 600
Query: 270 MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAG 329
M G+ PD V FI ++ CS + LV++G FE M + I P+ +HY+C++DL SR+
Sbjct: 601 MEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQ 660
Query: 330 RLEEARDFINQMLFR 344
++ +A +FI M +
Sbjct: 661 KISKAEEFIQAMPIK 675
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 174/303 (57%), Gaps = 2/303 (0%)
Query: 45 WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYII 104
W S+I ++NGL EA++ + ++R + D+YTF S++ AC G+ + G+ + I+
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVK 164
GF+ +++ G+ALVDMY + + A VF EM +++VSW +++ GY +GY EEA++
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193
Query: 165 IFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYG 224
I+ +++ +VPD FT+ SV+ + GNL +++G HG AL SG+ S V V+N LV++Y
Sbjct: 194 IYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYL 253
Query: 225 KCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIG 284
K D R+F EM +D VS+ ++ Y + E++R+F L KPD +T
Sbjct: 254 KFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSS 312
Query: 285 VLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFR 344
VL C R + I+ M K G + + +ID++++ G + ARD N M +
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 371
Query: 345 DSV 347
D+V
Sbjct: 372 DTV 374
Score = 167 bits (423), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 182/335 (54%), Gaps = 4/335 (1%)
Query: 23 RLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGS 82
R+ ++ +RQ+F +M RD +SW S+ISG + +G + EA++++ E+++ + D +T S
Sbjct: 153 RMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSS 212
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN 142
+L A G ++ +++G H + +K+G + + LV MY K R A VF EM ++
Sbjct: 213 VLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRD 272
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFC-DMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
VS+ M+ GY + EE+V++F ++ ++ PD T+ SV+ +CG+L L +
Sbjct: 273 SVSYNTMICGYLKLEMVEESVRMFLENLDQFK--PDLLTVSSVLRACGHLRDLSLAKYIY 330
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKAN 261
L +G + TV N L+ +Y KCG + +F+ M KD VSW +++S Y Q G
Sbjct: 331 NYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLM 390
Query: 262 ETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCI 321
E ++LF+ M+ + D +T++ ++SV +R ++ G + + K GI + +
Sbjct: 391 EAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS-GICIDLSVSNAL 449
Query: 322 IDLFSRAGRLEEARDFINQMLFRDSVLMQLVGQPC 356
ID++++ G + ++ + M D+V V C
Sbjct: 450 IDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISAC 484
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 163/319 (51%), Gaps = 2/319 (0%)
Query: 29 DSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACG 88
D+R++F +M RDS+S+ +MI G + + E++ +F E + + D T S+L ACG
Sbjct: 260 DARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACG 318
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
+ L ++Y++K GF + L+D+Y KC + +A VF M K+ VSW +
Sbjct: 319 HLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNS 378
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
++ GY Q+G EA+K+F M D T +IS LA L+ G H + SG
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
+ ++VSNAL+ +Y KCG + D ++FS M D V+W ++SA +FG +++
Sbjct: 439 ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTT 498
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
M + PD TF+ L +C+ G +I + + G + +I+++S+
Sbjct: 499 QMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSKC 557
Query: 329 GRLEEARDFINQMLFRDSV 347
G LE + +M RD V
Sbjct: 558 GCLENSSRVFERMSRRDVV 576
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 140/286 (48%), Gaps = 5/286 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ DS ++F M D+++W ++IS C + G + V +MR + D TF L
Sbjct: 459 VGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPM 518
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + A + G + H +++ G++ + G+AL++MY KC ++++ VF+ MS ++VV+W
Sbjct: 519 CASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTW 578
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG-AQFHGIAL 205
T M+ YG G E+A++ F DM+K G+VPD ++I +C + ++EG A F +
Sbjct: 579 TGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKT 638
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSAYSQFGKANETI 264
+ + +V L + I M K + S W +++ A G
Sbjct: 639 HYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAE 698
Query: 265 RLFESMLTHGLKPDKVTF-IGVLSVCSRTRLVEKGNQIFESMTKEH 309
R+ ++ L PD + I + + R +K + I +S+ +H
Sbjct: 699 RVSRRIIE--LNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKH 742
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 2/256 (0%)
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS-YKNVVSWTAMLV 151
L E + H+ +I G + + L+D Y R S+ +VF+ +S KNV W +++
Sbjct: 20 LNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIR 79
Query: 152 GYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLIS 211
+ +NG EA++ + +++ V PD +T SVI +C L E G + L G S
Sbjct: 80 AFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFES 139
Query: 212 FVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESML 271
+ V NALV +Y + G + ++F EM +D VSW +L+S YS G E + ++ +
Sbjct: 140 DLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK 199
Query: 272 THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRL 331
+ PD T VL +V++G Q + G+ + + ++ ++ + R
Sbjct: 200 NSWIVPDSFTVSSVLPAFGNLLVVKQG-QGLHGFALKSGVNSVVVVNNGLVAMYLKFRRP 258
Query: 332 EEARDFINQMLFRDSV 347
+AR ++M RDSV
Sbjct: 259 TDARRVFDEMDVRDSV 274
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 179/334 (53%), Gaps = 11/334 (3%)
Query: 32 QLFCDMRERDSISWTSMISGCTQN-GLHREAIDVFREM--RSEMLETDQYTFGSMLTACG 88
++F + S W ++I C + EA ++R+M R E D++TF +L AC
Sbjct: 104 RVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGES-SPDKHTFPFVLKACA 162
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
+ EG Q H I+K GF ++Y + L+ +Y C + A VF EM +++VSW +
Sbjct: 163 YIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNS 222
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
M+ + G + A+++F +MQ+ PD +T+ SV+S+C L SL G H L
Sbjct: 223 MIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKC 281
Query: 209 LISF---VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
+ V V N+L+ +Y KCGS+ ++F M +D SW A++ ++ G+A E +
Sbjct: 282 DVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMN 341
Query: 266 LFESML--THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIID 323
F+ M+ ++P+ VTF+G+L C+ V KG Q F+ M +++ I P +HY CI+D
Sbjct: 342 FFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVD 401
Query: 324 LFSRAGRLEEARDFINQMLFR-DSVLMQLVGQPC 356
L +RAG + EA D + M + D+V+ + + C
Sbjct: 402 LIARAGYITEAIDMVMSMPMKPDAVIWRSLLDAC 435
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 131/240 (54%), Gaps = 8/240 (3%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+R++F +M ER +SW SMI + G + A+ +FREM+ E D YT S+L+AC G
Sbjct: 205 ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAG 263
Query: 90 VMALQEGNQAHSYIIKTGFKD---NIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
+ +L G AH+++++ D ++ ++L++MYCKC S++ AE VF+ M +++ SW
Sbjct: 264 LGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASW 323
Query: 147 TAMLVGYGQNGYSEEAVKIFCDM--QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
AM++G+ +G +EEA+ F M ++ V P+ T ++ +C + + +G Q+ +
Sbjct: 324 NAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMM 383
Query: 205 LVSGLI-SFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFGKANE 262
+ I + +V L + G I + + M K D V W +L+ A + G + E
Sbjct: 384 VRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE 443
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/352 (33%), Positives = 181/352 (51%), Gaps = 37/352 (10%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC-- 87
+RQ+F ++ + ++ MISG ++GL +E + + + M + D YT +L A
Sbjct: 88 ARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNS 147
Query: 88 -GGVMALQEG--NQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV 144
G M L H+ IIK + + +ALVD Y K ++SA TVF+ M +NVV
Sbjct: 148 RGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVV 207
Query: 145 SWTAMLVGYGQNGYSEEAVKIF--------------------------------CDMQKY 172
T+M+ GY G+ E+A +IF MQ+
Sbjct: 208 CCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRA 267
Query: 173 GVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDC 232
G P+ T SVI +C L S E G Q H + SG+ + + + ++L+ +Y KCG I D
Sbjct: 268 GFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDA 327
Query: 233 HRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRT 292
R+F +M K+ SWT+++ Y + G E + LF M ++P+ VTF+G LS CS +
Sbjct: 328 RRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHS 387
Query: 293 RLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFR 344
LV+KG +IFESM +++ + P +HY+CI+DL RAG L +A +F M R
Sbjct: 388 GLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER 439
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 128/235 (54%), Gaps = 3/235 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNG-LHREAIDVFREMRSEMLETDQYTFGSMLT 85
+ED+ ++F + +D + + +M+ G +++G + ++D++ M+ + TF S++
Sbjct: 222 VEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIG 281
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
AC + + + G Q H+ I+K+G +I GS+L+DMY KC + A VF +M KNV S
Sbjct: 282 ACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFS 341
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIA 204
WT+M+ GYG+NG EEA+++F M+++ + P+ T +S+C + +++G + F +
Sbjct: 342 WTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQ 401
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFG 258
+ + +V L G+ G + M + D W AL+S+ + G
Sbjct: 402 RDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHG 456
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLV 151
A + G + H+ IIKTGF+ ++ L+ ++ KC + A VF E+ + ++ M+
Sbjct: 49 APKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMIS 108
Query: 152 GYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLAS----------------LE 195
GY ++G +E + + M G D +TL V+ + + S ++
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIK 168
Query: 196 EGAQFHGIALVSGLIS--------------FVTVSN-------ALVSLYGKCGSIEDCHR 234
+ + L++ L+ F T+ + +++S Y G +ED
Sbjct: 169 CDVELDDV-LITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEE 227
Query: 235 LFSEMTFKDEVSWTALVSAYSQFGK-ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTR 293
+F+ KD V + A+V +S+ G+ A ++ ++ SM G P+ TF V+ CS
Sbjct: 228 IFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLT 287
Query: 294 LVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
E G Q+ + K G+ S ++D++++ G + +AR +QM
Sbjct: 288 SHEVGQQVHAQIMKS-GVYTHIKMGSSLLDMYAKCGGINDARRVFDQM 334
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 177/327 (54%), Gaps = 33/327 (10%)
Query: 60 EAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALV 119
+A + +M + D TF ++ A + + G Q HS I++ GF++++Y ++LV
Sbjct: 100 KAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLV 159
Query: 120 DMY-------------------------------CKCRSVKSAETVFKEMSYKNVVSWTA 148
MY CKC V++A +F EM ++N+ +W+
Sbjct: 160 HMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSI 219
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
M+ GY +N E+A+ +F M++ GVV ++ + SVISSC +L +LE G + + + S
Sbjct: 220 MINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSH 279
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
+ + + ALV ++ +CG IE +F + D +SW++++ + G A++ + F
Sbjct: 280 MTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFS 339
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
M++ G P VTF VLS CS LVEKG +I+E+M K+HGI P +HY CI+D+ RA
Sbjct: 340 QMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRA 399
Query: 329 GRLEEARDFINQMLFRDS--VLMQLVG 353
G+L EA +FI +M + + +L L+G
Sbjct: 400 GKLAEAENFILKMHVKPNAPILGALLG 426
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 138/263 (52%), Gaps = 2/263 (0%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
M+E++R++F +M R+ +W+ MI+G +N +AID+F M+ E + ++ S+++
Sbjct: 198 MVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVIS 257
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
+C + AL+ G +A+ Y++K+ N+ G+ALVDM+ +C ++ A VF+ + + +S
Sbjct: 258 SCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLS 317
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIA 204
W++++ G +G++ +A+ F M G +P D T +V+S+C + +E+G + + +
Sbjct: 318 WSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMK 377
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
G+ + +V + G+ G + + +M K + + K E
Sbjct: 378 KDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVA 437
Query: 265 RLFESMLTHGLKPDKVTFIGVLS 287
+ML +KP+ + +LS
Sbjct: 438 ERVGNMLIK-VKPEHSGYYVLLS 459
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 41/274 (14%)
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAET--------VFKEMSYKNVVSWTAMLV 151
H ++++T +++ S L+ + C S + T +F ++ N+ + ++
Sbjct: 32 HGFLLRTHLISDVFVASRLLAL-CVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIR 90
Query: 152 GYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLIS 211
+ +A + M K + PD+ T +I + + + G Q H + G +
Sbjct: 91 CFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQN 150
Query: 212 FVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQ--------------- 256
V V N+LV +Y CG I R+F +M F+D VSWT++V+ Y +
Sbjct: 151 DVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMP 210
Query: 257 -------------FGKAN---ETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQ 300
+ K N + I LFE M G+ ++ + V+S C+ +E G +
Sbjct: 211 HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGER 270
Query: 301 IFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
+E + K H + + + ++D+F R G +E+A
Sbjct: 271 AYEYVVKSHMTVNLILG-TALVDMFWRCGDIEKA 303
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 176/321 (54%), Gaps = 10/321 (3%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
+F M ++ +SWT+MISGC N + +D+FR M+ E L ++ T S+L AC +
Sbjct: 206 HVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC---V 262
Query: 92 ALQEGN----QAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
L G+ + H + + G + +A + MYC+C +V + +F+ ++VV W+
Sbjct: 263 ELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWS 322
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
+M+ GY + G E + + M+K G+ + TL +++S+C N L + H L
Sbjct: 323 SMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKC 382
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
G +S + + NAL+ +Y KCGS+ +F E+T KD VSW+++++AY G +E + +F
Sbjct: 383 GFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIF 442
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ-DHYSCIIDLFS 326
+ M+ G + D + F+ +LS C+ LVE+ IF K H +P+ +HY+C I+L
Sbjct: 443 KGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYH--MPVTLEHYACYINLLG 500
Query: 327 RAGRLEEARDFINQMLFRDSV 347
R G++++A + M + S
Sbjct: 501 RFGKIDDAFEVTINMPMKPSA 521
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 168/326 (51%), Gaps = 16/326 (4%)
Query: 31 RQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGV 90
R++F +M RD++S+ S+I+ C Q+GL EA+ + +EM S+L C +
Sbjct: 102 RKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRM 161
Query: 91 MALQE-GNQAHSYI-IKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
+ + H+ + + ++++ +ALVDMY K +A VF +M KN VSWTA
Sbjct: 162 GSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTA 221
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNL---ASLEEGAQFHGIAL 205
M+ G N E V +F MQ+ + P+ TL SV+ +C L +SL + + HG +
Sbjct: 222 MISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVK--EIHGFSF 279
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
G + ++ A +++Y +CG++ LF +D V W++++S Y++ G +E +
Sbjct: 280 RHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMN 339
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK----EHGIIPIQDHYSCI 321
L M G++ + VT + ++S C+ + L+ + + + K H ++ + +
Sbjct: 340 LLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLG-----NAL 394
Query: 322 IDLFSRAGRLEEARDFINQMLFRDSV 347
ID++++ G L AR+ ++ +D V
Sbjct: 395 IDMYAKCGSLSAAREVFYELTEKDLV 420
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 136/259 (52%), Gaps = 2/259 (0%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
SR LF + RD + W+SMISG + G E +++ +MR E +E + T ++++AC
Sbjct: 306 SRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTN 365
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
L + HS I+K GF +I G+AL+DMY KC S+ +A VF E++ K++VSW++M
Sbjct: 366 STLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSM 425
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
+ YG +G+ EA++IF M K G DD +++S+C + +EE A +
Sbjct: 426 INAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHM 485
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSAYSQFGKANETIRLFE 268
+ ++L G+ G I+D + M K W++L+SA G+ + ++
Sbjct: 486 PVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIA 545
Query: 269 SMLTHGLKPDKVTFIGVLS 287
+ L +PD +LS
Sbjct: 546 NELMKS-EPDNPANYVLLS 563
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 147/321 (45%), Gaps = 14/321 (4%)
Query: 37 MRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYT--FGSMLTACGGVMALQ 94
+ R ++ + + G + + EA+ +++ ++ L T+ +T S++ AC A Q
Sbjct: 5 LSSRLNLELGNKLKGLVSDQFYDEALRLYK-LKIHSLGTNGFTAILPSVIKAC----AFQ 59
Query: 95 E-----GNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
+ G Q H +K G + ++L+ MY K + VF EM +++ VS+ ++
Sbjct: 60 QEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSI 119
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIALV-S 207
+ Q+G EA+K+ +M YG +P + S+++ C + S + A+ FH + LV
Sbjct: 120 INSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDE 179
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
+ V +S ALV +Y K +F +M K+EVSWTA++S + LF
Sbjct: 180 RMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLF 239
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSR 327
+M L+P++VT + VL C + + HG + + + ++ R
Sbjct: 240 RAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCR 299
Query: 328 AGRLEEARDFINQMLFRDSVL 348
G + +R RD V+
Sbjct: 300 CGNVSLSRVLFETSKVRDVVM 320
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 177/322 (54%), Gaps = 3/322 (0%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
E S ++ + +D + WT MISG + G +A+ VF EM + S++ +C
Sbjct: 297 EASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASC 356
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
+ + G H Y+++ G+ + A ++L+ MY KC + + +F+ M+ +++VSW
Sbjct: 357 AQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWN 416
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVP--DDFTLGSVISSCGNLASLEEGAQFHGIAL 205
A++ GY QN +A+ +F +M K+ V D FT+ S++ +C + +L G H I +
Sbjct: 417 AIISGYAQNVDLCKALLLFEEM-KFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVI 475
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
S + V ALV +Y KCG +E R F +++KD VSW L++ Y GK + +
Sbjct: 476 RSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALE 535
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
++ L G++P+ V F+ VLS CS +V++G +IF SM ++ G+ P +H +C++DL
Sbjct: 536 IYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLL 595
Query: 326 SRAGRLEEARDFINQMLFRDSV 347
RA R+E+A F + R S+
Sbjct: 596 CRAKRIEDAFKFYKENFTRPSI 617
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 169/322 (52%), Gaps = 2/322 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ D++ LF M +RD +SW +MISG G E + + MR + L DQ TFG+ L+
Sbjct: 195 VGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSV 254
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
G + L+ G H I+KTGF +++ +AL+ MY KC +++ V + + K+VV W
Sbjct: 255 SGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCW 314
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
T M+ G + G +E+A+ +F +M + G + SV++SC L S + GA HG L
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR 374
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
G N+L+++Y KCG ++ +F M +D VSW A++S Y+Q + + L
Sbjct: 375 HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLL 434
Query: 267 FESMLTHGLKP-DKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
FE M ++ D T + +L CS + G ++ + I P + ++D++
Sbjct: 435 FEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG-KLIHCIVIRSFIRPCSLVDTALVDMY 493
Query: 326 SRAGRLEEARDFINQMLFRDSV 347
S+ G LE A+ + + ++D V
Sbjct: 494 SKCGYLEAAQRCFDSISWKDVV 515
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 165/322 (51%), Gaps = 4/322 (1%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
++ +R++F +MRERD + WT+MI ++ G+ EA + EMR + ++ T ML+
Sbjct: 96 LLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLS 155
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
GV+ + + H + + GF +I ++++++YCKC V A+ +F +M +++VS
Sbjct: 156 ---GVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVS 212
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W M+ GY G E +K+ M+ G+ PD T G+ +S G + LE G H +
Sbjct: 213 WNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIV 272
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
+G + + AL+++Y KCG E +R+ + KD V WT ++S + G+A + +
Sbjct: 273 KTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALI 332
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
+F ML G V++ C++ + G + + + HG + +I ++
Sbjct: 333 VFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR-HGYTLDTPALNSLITMY 391
Query: 326 SRAGRLEEARDFINQMLFRDSV 347
++ G L+++ +M RD V
Sbjct: 392 AKCGHLDKSLVIFERMNERDLV 413
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 150/303 (49%), Gaps = 4/303 (1%)
Query: 45 WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYII 104
+ S I+ + +G H++ + F M + L D +TF S+L AC + L G H ++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVK 164
GF + Y S+LV++Y K + A VF+EM ++VV WTAM+ Y + G EA
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 165 IFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYG 224
+ +M+ G+ P TL ++S + L+ H A++ G + V N++++LY
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQLQ---CLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 225 KCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIG 284
KC + D LF +M +D VSW ++S Y+ G +E ++L M GL+PD+ TF
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 285 VLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFR 344
LSV +E G + + K G + +I ++ + G+ E + + + +
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKT-GFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309
Query: 345 DSV 347
D V
Sbjct: 310 DVV 312
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 179/334 (53%), Gaps = 3/334 (0%)
Query: 15 WDSYLVLGRLLMIED-SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEML 73
W+S + + R L + D + +F M +RD +SW +I C+ +G A+D F MR +
Sbjct: 172 WNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEI 231
Query: 74 ETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAET 133
+ D+YT +++ C + L +G QA + IK GF N A +DM+ KC + +
Sbjct: 232 QPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVK 291
Query: 134 VFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLAS 193
+F+E+ + V +M+ Y + E+A+++F V PD FT SV+SS N
Sbjct: 292 LFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSM-NAVM 350
Query: 194 LEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSA 253
L+ GA H + + G V+ +L+ +Y K GS++ +F++ KD + W ++
Sbjct: 351 LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMG 410
Query: 254 YSQFGKANETIRLFESML-THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGII 312
++ +A E++ +F +L LKPD+VT +G+L C V +G QIF SM K HG+
Sbjct: 411 LARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVN 470
Query: 313 PIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDS 346
P +HY+CII+L R G + EA+D +++ F S
Sbjct: 471 PGNEHYACIIELLCRVGMINEAKDIADKIPFEPS 504
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 140/262 (53%), Gaps = 4/262 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ ++ LF +M ERD +SW +MISG G H I VF +M+ + ++TF S+L +
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTF-SILAS 144
Query: 87 CGGVMALQEGNQAHSYIIKTGF-KDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
V ++ G Q H I +G + N+ ++++DMY + A +VF M ++VVS
Sbjct: 145 L--VTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVS 202
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W +++ +G E A+ F M++ + PD++T+ V+S C +L L +G Q + +
Sbjct: 203 WNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCI 262
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
G +S V A + ++ KC ++D +LF E+ D V +++ +YS + +R
Sbjct: 263 KMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALR 322
Query: 266 LFESMLTHGLKPDKVTFIGVLS 287
LF +T ++PDK TF VLS
Sbjct: 323 LFILAMTQSVRPDKFTFSSVLS 344
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 131/281 (46%), Gaps = 36/281 (12%)
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRSV------------------------------- 128
H+ +++ GF Y G+ + +Y K SV
Sbjct: 27 HAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYL 86
Query: 129 KSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSC 188
+A +F EM ++VVSW M+ G G+ E +++F DMQ++ + P +FT S+++S
Sbjct: 87 NNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTF-SILASL 145
Query: 189 GNLASLEEGAQFHGIALVSGLISF-VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSW 247
+ + G Q HG A+ SG+ + + V N+++ +Y + G + +F M +D VSW
Sbjct: 146 --VTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSW 203
Query: 248 TALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK 307
L+ + S G + F M ++PD+ T V+S+CS R + KG Q ++
Sbjct: 204 NCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL-ALCI 262
Query: 308 EHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVL 348
+ G + ID+FS+ RL+++ ++ DSVL
Sbjct: 263 KMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVL 303
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 156/255 (61%), Gaps = 1/255 (0%)
Query: 96 GNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQ 155
G HS +I++GF IY ++L+ +Y C V SA VF +M K++V+W +++ G+ +
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 156 NGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTV 215
NG EEA+ ++ +M G+ PD FT+ S++S+C + +L G + H + GL +
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 216 SNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESM-LTHG 274
SN L+ LY +CG +E+ LF EM K+ VSWT+L+ + G E I LF+ M T G
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 275 LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
L P ++TF+G+L CS +V++G + F M +E+ I P +H+ C++DL +RAG++++A
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 246
Query: 335 RDFINQMLFRDSVLM 349
++I M + +V++
Sbjct: 247 YEYIKSMPMQPNVVI 261
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 134/238 (56%), Gaps = 3/238 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ + ++F M E+D ++W S+I+G +NG EA+ ++ EM S+ ++ D +T S+L+A
Sbjct: 39 VASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSA 98
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + AL G + H Y+IK G N+++ + L+D+Y +C V+ A+T+F EM KN VSW
Sbjct: 99 CAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW 158
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKY-GVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIA 204
T+++VG NG+ +EA+++F M+ G++P + T ++ +C + ++EG + F +
Sbjct: 159 TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR 218
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSAYSQFGKAN 261
+ + +V L + G ++ + M + V W L+ A + G ++
Sbjct: 219 EEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD 276
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 91/157 (57%), Gaps = 1/157 (0%)
Query: 191 LASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTAL 250
+A + G H + + SG S + V N+L+ LY CG + +++F +M KD V+W ++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 251 VSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHG 310
++ +++ GK E + L+ M + G+KPD T + +LS C++ + G ++ M K G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-G 119
Query: 311 IIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ + ++DL++R GR+EEA+ ++M+ ++SV
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV 156
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 183/327 (55%), Gaps = 5/327 (1%)
Query: 20 VLGRLLMIED---SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETD 76
+L L++I D +RQ+F +M + W ++ G +N L E++ ++++MR + D
Sbjct: 49 LLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPD 108
Query: 77 QYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK 136
++T+ ++ A + G H++++K GF + LV MY K + SAE +F+
Sbjct: 109 EFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFE 168
Query: 137 EMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE 196
M K++V+W A L Q G S A++ F M V D FT+ S++S+CG L SLE
Sbjct: 169 SMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEI 228
Query: 197 GAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQ 256
G + + A + + V NA + ++ KCG+ E LF EM ++ VSW+ ++ Y+
Sbjct: 229 GEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAM 288
Query: 257 FGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESM--TKEHGIIPI 314
G + E + LF +M GL+P+ VTF+GVLS CS LV +G + F M + + + P
Sbjct: 289 NGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPR 348
Query: 315 QDHYSCIIDLFSRAGRLEEARDFINQM 341
++HY+C++DL R+G LEEA +FI +M
Sbjct: 349 KEHYACMVDLLGRSGLLEEAYEFIKKM 375
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 191 bits (484), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 175/349 (50%), Gaps = 39/349 (11%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRS-EMLETDQYTFGSMLTACGGV 90
++F + + +++ + ISG +NG+ VF MR E + TF + +TAC +
Sbjct: 185 RMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASL 244
Query: 91 MALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS-YKNVVSWTAM 149
+ LQ G Q H ++K F+ G+AL+DMY KCR KSA VF E+ +N++SW ++
Sbjct: 245 LNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSV 304
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFT----------------------------- 180
+ G NG E AV++F + G+ PD T
Sbjct: 305 ISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVM 364
Query: 181 ------LGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHR 234
L S++S+C ++ +L+ G + HG + + + V +L+ +Y KCG R
Sbjct: 365 VPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARR 424
Query: 235 LFS--EMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRT 292
+F E KD V W ++S Y + G+ I +FE + ++P TF VLS CS
Sbjct: 425 IFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHC 484
Query: 293 RLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
VEKG+QIF M +E+G P +H C+IDL R+GRL EA++ I+QM
Sbjct: 485 GNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 148/281 (52%), Gaps = 5/281 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ D+ ++ +M ER S + +SG +NG R+A +F + R + T S+L
Sbjct: 82 VTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGG 141
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
CG + + G Q H +K+GF+ +Y G++LV MY +C A +F+++ +K+VV++
Sbjct: 142 CGDI---EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTY 198
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGV-VPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
A + G +NG +F M+K+ P+D T + I++C +L +L+ G Q HG+ +
Sbjct: 199 NAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVM 258
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT-FKDEVSWTALVSAYSQFGKANETI 264
V AL+ +Y KC + + +F+E+ ++ +SW +++S G+ +
Sbjct: 259 KKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAV 318
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESM 305
LFE + + GLKPD T+ ++S S+ V + + FE M
Sbjct: 319 ELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 133/260 (51%), Gaps = 17/260 (6%)
Query: 75 TDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETV 134
+++TF +L +C + + +G H+ ++KTGF +++ +ALV MY K + V A V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 135 FKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASL 194
EM + + S A + G +NG+ +A ++F D + G + T+ SV+ CG+ +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---I 145
Query: 195 EEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAY 254
E G Q H +A+ SG V V +LVS+Y +CG R+F ++ K V++ A +S
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 255 SQFGKANETIRLFESMLT-HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIP 313
+ G N +F M +P+ VTF+ ++ C+ ++ G Q+ HG++
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQL-------HGLVM 258
Query: 314 IQDHY------SCIIDLFSR 327
++ + +ID++S+
Sbjct: 259 KKEFQFETMVGTALIDMYSK 278
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 182/351 (51%), Gaps = 34/351 (9%)
Query: 40 RDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQA 99
D+ISW ++I+G QNG EA+ + M L+ D+++FG++L + +L+ G +
Sbjct: 223 NDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEV 282
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYS 159
H+ ++K G N + S +VD+YCKC ++K AE+ + N+ S ++M+VGY G
Sbjct: 283 HARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKM 342
Query: 160 EEAVKIFCDMQKYGVV--------------------------------PDDFTLGSVISS 187
EA ++F + + +V PD + SV+ +
Sbjct: 343 VEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGA 402
Query: 188 CGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSW 247
C A +E G + HG +L +G++ + A V +Y KCG++E R+F +D V +
Sbjct: 403 CSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMY 462
Query: 248 TALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK 307
A+++ + G ++ + FE M G KPD++TF+ +LS C LV +G + F+SM +
Sbjct: 463 NAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIE 522
Query: 308 EHGIIPIQDHYSCIIDLFSRAGRLEEARDFIN--QMLFRDSVLMQLVGQPC 356
+ I P HY+C+IDL+ +A RL++A + + + +D+V++ C
Sbjct: 523 AYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNAC 573
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 177/401 (44%), Gaps = 72/401 (17%)
Query: 27 IEDSRQLF-CDMRERDSISWTSMISGCTQ-NGLHREAIDVFREMRSEMLE---TDQYTFG 81
++++R+LF D ERD I++ +++SG + +G EAI++F EM + + D +T
Sbjct: 70 VKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVT 129
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF------ 135
+M+ + + G Q H ++KTG +A S+L+ MY KC K +F
Sbjct: 130 TMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVE 189
Query: 136 ----------------------------KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFC 167
+ + +SW ++ GY QNGY EEA+K+
Sbjct: 190 FVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAV 249
Query: 168 DMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCG 227
M++ G+ D+ + G+V++ +L SL+ G + H L +G S VS+ +V +Y KCG
Sbjct: 250 SMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCG 309
Query: 228 SI---EDCH----------------------------RLFSEMTFKDEVSWTALVSAYSQ 256
++ E H RLF ++ K+ V WTA+ Y
Sbjct: 310 NMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLN 369
Query: 257 FGKANETIRLFESMLTHGLK-PDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ 315
+ + + L + + + PD + + VL CS +E G +I + GI+ +
Sbjct: 370 LRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEI-HGHSLRTGILMDK 428
Query: 316 DHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLMQLVGQPC 356
+ +D++S+ G +E A + RD+V+ + C
Sbjct: 429 KLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGC 469
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 194 LEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSA 253
L++G H ++ SG SN LV+LY K G + + +F EM ++ SW A+++A
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAA 63
Query: 254 YSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRT 292
Y +F E LFES + D +T+ +LS ++T
Sbjct: 64 YVKFNNVKEARELFES---DNCERDLITYNTLLSGFAKT 99
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 159/307 (51%), Gaps = 1/307 (0%)
Query: 36 DMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQE 95
D +R +SW SM + G +A ++ M E + D TF ++ +C L +
Sbjct: 215 DRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQ 274
Query: 96 GNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQ 155
G HS+ I G +I A + + MY K SA +F M+ + VSWT M+ GY +
Sbjct: 275 GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAE 334
Query: 156 NGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLI-SFVT 214
G +EA+ +F M K G PD TL S+IS CG SLE G A + G V
Sbjct: 335 KGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVM 394
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
+ NAL+ +Y KCGSI + +F K V+WT +++ Y+ G E ++LF M+
Sbjct: 395 ICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD 454
Query: 275 LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
KP+ +TF+ VL C+ + +EKG + F M + + I P DHYSC++DL R G+LEEA
Sbjct: 455 YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEA 514
Query: 335 RDFINQM 341
+ I M
Sbjct: 515 LELIRNM 521
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 136/260 (52%), Gaps = 2/260 (0%)
Query: 44 SWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYI 103
+W I E++ +FREM+ E + +TF + AC + + H+++
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 104 IKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAV 163
IK+ F +++ G+A VDM+ KC SV A VF+ M ++ +W AML G+ Q+G++++A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 164 KIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLY 223
+F +M+ + PD T+ ++I S SL+ H + + G+ VTV+N +S Y
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTY 198
Query: 224 GKCGSIEDCHRLFSEMTFKDE--VSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVT 281
GKCG ++ +F + D VSW ++ AYS FG+A + L+ ML KPD T
Sbjct: 199 GKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLST 258
Query: 282 FIGVLSVCSRTRLVEKGNQI 301
FI + + C + +G I
Sbjct: 259 FINLAASCQNPETLTQGRLI 278
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 156/326 (47%), Gaps = 22/326 (6%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++ + ++F M ERD+ +W +M+SG Q+G +A +FREMR + D T +++ +
Sbjct: 103 VDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQS 162
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY--KNVV 144
+L+ H+ I+ G + + + Y KC + SA+ VF+ + + VV
Sbjct: 163 ASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVV 222
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
SW +M Y G + +A ++C M + PD T ++ +SC N +L +G H A
Sbjct: 223 SWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHA 282
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
+ G + N +S+Y K LF MT + VSWT ++S Y++ G +E +
Sbjct: 283 IHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEAL 342
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC---- 320
LF +M+ G KPD VT + ++S C + +E G I D Y C
Sbjct: 343 ALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDAR----------ADIYGCKRDN 392
Query: 321 ------IIDLFSRAGRLEEARDFINQ 340
+ID++S+ G + EARD +
Sbjct: 393 VMICNALIDMYSKCGSIHEARDIFDN 418
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 71/129 (55%), Gaps = 8/129 (6%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I ++R +F + E+ ++WT+MI+G NG+ EA+ +F +M + + TF ++L A
Sbjct: 409 IHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQA 468
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAG----SALVDMYCKCRSVKSAETVFKEMSYK- 141
C +L++G + + +I+K + NI G S +VD+ + ++ A + + MS K
Sbjct: 469 CAHSGSLEKGWE-YFHIMKQVY--NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKP 525
Query: 142 NVVSWTAML 150
+ W A+L
Sbjct: 526 DAGIWGALL 534
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 182/326 (55%), Gaps = 3/326 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLH-REAIDVFREMRSEMLETDQYTFGSMLT 85
+ + R++F M E D +SW S+I ++ EA+ F + + ++ TF S+L+
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLS 525
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS-YKNVV 144
A + + G Q H +K D +AL+ Y KC + E +F M+ ++ V
Sbjct: 526 AVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNV 585
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
+W +M+ GY N +A+ + M + G D F +V+S+ ++A+LE G + H +
Sbjct: 586 TWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACS 645
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
+ + L S V V +ALV +Y KCG ++ R F+ M ++ SW +++S Y++ G+ E +
Sbjct: 646 VRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEAL 705
Query: 265 RLFESMLTHG-LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIID 323
+LFE+M G PD VTF+GVLS CS L+E+G + FESM+ +G+ P +H+SC+ D
Sbjct: 706 KLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMAD 765
Query: 324 LFSRAGRLEEARDFINQMLFRDSVLM 349
+ RAG L++ DFI +M + +VL+
Sbjct: 766 VLGRAGELDKLEDFIEKMPMKPNVLI 791
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 169/325 (52%), Gaps = 9/325 (2%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I D+R++F M ++DS+SW SMI+G QNG EA++ ++ MR + +T S L++
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + + G Q H +K G N+ +AL+ +Y + + +F M + VSW
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSW 484
Query: 147 TAMLVGYGQNGYS-EEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
+++ ++ S EAV F + Q+ G + T SV+S+ +L+ E G Q HG+AL
Sbjct: 485 NSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLAL 544
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT-FKDEVSWTALVSAYSQFGKANETI 264
+ + T NAL++ YGKCG ++ C ++FS M +D V+W +++S Y + +
Sbjct: 545 KNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKAL 604
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK---EHGIIPIQDHYSCI 321
L ML G + D + VLS + +E+G ++ + E ++ S +
Sbjct: 605 DLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV----GSAL 660
Query: 322 IDLFSRAGRLEEARDFINQMLFRDS 346
+D++S+ GRL+ A F N M R+S
Sbjct: 661 VDMYSKCGRLDYALRFFNTMPVRNS 685
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 173/322 (53%), Gaps = 9/322 (2%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA--- 86
+R++F M R++++ ++ G + EA +F +M S M++ ++ +L++
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS-MIDVSPESYVILLSSFPE 320
Query: 87 --CGGVMALQEGNQAHSYIIKTGFKDNIYA-GSALVDMYCKCRSVKSAETVFKEMSYKNV 143
+ L++G + H ++I TG D + G+ LV+MY KC S+ A VF M+ K+
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGI 203
VSW +M+ G QNG EAV+ + M+++ ++P FTL S +SSC +L + G Q HG
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 204 ALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKA-NE 262
+L G+ V+VSNAL++LY + G + +C ++FS M D+VSW +++ A ++ ++ E
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPE 500
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
+ F + G K +++TF VLS S E G QI + ++ I + +I
Sbjct: 501 AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI-HGLALKNNIADEATTENALI 559
Query: 323 DLFSRAGRLEEARDFINQMLFR 344
+ + G ++ ++M R
Sbjct: 560 ACYGKCGEMDGCEKIFSRMAER 581
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 175/350 (50%), Gaps = 16/350 (4%)
Query: 9 WICIRKWDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM 68
++C ++YL G + +R++F +M R+ +SW ++SG ++NG H+EA+ R+M
Sbjct: 37 YLCNNLINAYLETGDSV---SARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDM 93
Query: 69 RSEMLETDQYTFGSMLTACG--GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKC- 125
E + ++QY F S+L AC G + + G Q H + K + + + L+ MY KC
Sbjct: 94 VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 126 RSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVI 185
SV A F ++ KN VSW +++ Y Q G A +IF MQ G P ++T GS++
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 186 SSCGNLASLEEG--AQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKD 243
++ +L + Q SGL++ + V + LVS + K GS+ ++F++M ++
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRN 273
Query: 244 EVSWTALVSAYSQFGKANETIRLFESMLTH-GLKPDKVTFIGVLSVCSRTRLVE-----K 297
V+ L+ + E +LF M + + P+ +++ +LS L E K
Sbjct: 274 AVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKK 331
Query: 298 GNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
G ++ + + + + +++++++ G + +AR M +DSV
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSV 381
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 131/259 (50%), Gaps = 12/259 (4%)
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYS 159
HS + K ++Y + L++ Y + SA VF EM +N VSW ++ GY +NG
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 160 EEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE--GAQFHGIALVSGLISFVTVSN 217
+EA+ DM K G+ + + SV+ +C + S+ G Q HG+ VSN
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 218 ALVSLYGKC-GSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLK 276
L+S+Y KC GS+ F ++ K+ VSW +++S YSQ G R+F SM G +
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 277 PDKVTFIG-VLSVCSRT----RLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRL 331
P + TF V + CS T RL+E QI ++ K G++ S ++ F+++G L
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLE---QIMCTIQKS-GLLTDLFVGSGLVSAFAKSGSL 259
Query: 332 EEARDFINQMLFRDSVLMQ 350
AR NQM R++V +
Sbjct: 260 SYARKVFNQMETRNAVTLN 278
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 119/236 (50%), Gaps = 4/236 (1%)
Query: 22 GRLLMIEDSRQLFCDMRER-DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTF 80
G+ ++ ++F M ER D+++W SMISG N L +A+D+ M D + +
Sbjct: 563 GKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMY 622
Query: 81 GSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY 140
++L+A V L+ G + H+ ++ + ++ GSALVDMY KC + A F M
Sbjct: 623 ATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV 682
Query: 141 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYG-VVPDDFTLGSVISSCGNLASLEEG-A 198
+N SW +M+ GY ++G EEA+K+F M+ G PD T V+S+C + LEEG
Sbjct: 683 RNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK 742
Query: 199 QFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEV-SWTALVSA 253
F ++ GL + + + + G+ G ++ +M K V W ++ A
Sbjct: 743 HFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGA 798
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%)
Query: 200 FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
FH + L V + N L++ Y + G ++F EM ++ VSW +VS YS+ G+
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 260 ANETIRLFESMLTHGLKPDKVTFIGVLSVC 289
E + M+ G+ ++ F+ VL C
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRAC 112
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 171/330 (51%), Gaps = 36/330 (10%)
Query: 46 TSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIK 105
+M S + GL REA+ VF M + D+ + S +++C + + G H Y+++
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 106 TGFK--DNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYS---- 159
GF+ DNI +AL+DMY KC +A +F MS K VV+W +++ GY +NG
Sbjct: 366 NGFESWDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAW 423
Query: 160 ---------------------------EEAVKIFCDMQ-KYGVVPDDFTLGSVISSCGNL 191
EEA+++FC MQ + GV D T+ S+ S+CG+L
Sbjct: 424 ETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHL 483
Query: 192 ASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALV 251
+L+ + +G+ V + LV ++ +CG E +F+ +T +D +WTA +
Sbjct: 484 GALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAI 543
Query: 252 SAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGI 311
A + G A I LF+ M+ GLKPD V F+G L+ CS LV++G +IF SM K HG+
Sbjct: 544 GAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGV 603
Query: 312 IPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
P HY C++DL RAG LEEA I M
Sbjct: 604 SPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 170/352 (48%), Gaps = 34/352 (9%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVF-REMRSEMLETDQYTFGSMLT 85
++ +R++F +M ER+ +SWTSMI G + ++A+D+F R +R E + + T +++
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVIS 244
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
AC + L+ G + +++I +G + N SALVDMY KC ++ A+ +F E N+
Sbjct: 245 ACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
AM Y + G + EA+ +F M GV PD ++ S ISSC L ++ G HG L
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
+G S+ + NAL+ +Y KC + R+F M+ K V+W ++V+ Y + G+ +
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 266 LFESML--------------------------------THGLKPDKVTFIGVLSVCSRTR 293
FE+M G+ D VT + + S C
Sbjct: 425 TFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Query: 294 LVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRD 345
++ I+ + K +GI + ++D+FSR G E A N + RD
Sbjct: 485 ALDLAKWIYYYIEK-NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRD 535
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 158/298 (53%), Gaps = 2/298 (0%)
Query: 45 WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYII 104
+ S+I G +GL EAI +F M + + D+YTF L+AC A G Q H I+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVK 164
K G+ +++ ++LV Y +C + SA VF EMS +NVVSWT+M+ GY + ++++AV
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 165 IFCDM-QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLY 223
+F M + V P+ T+ VIS+C L LE G + + SG+ + +ALV +Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 224 GKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFI 283
KC +I+ RLF E + A+ S Y + G E + +F M+ G++PD+++ +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 284 GVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+S CS+ R + G + + +G + + +ID++ + R + A ++M
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLR-NGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 128/230 (55%), Gaps = 3/230 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRS-EMLETDQYTFGSMLT 85
++ + + F M E++ +SW ++ISG Q L EAI+VF M+S E + D T S+ +
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
ACG + AL + YI K G + ++ G+ LVDM+ +C +SA ++F ++ ++V +
Sbjct: 479 ACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA 538
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIA 204
WTA + G +E A+++F DM + G+ PD +++C + +++G + F+ +
Sbjct: 539 WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSML 598
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSA 253
+ G+ +V L G+ G +E+ +L +M + ++V W +L++A
Sbjct: 599 KLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 126/246 (51%), Gaps = 6/246 (2%)
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRSVKS---AETVFKEM-SYKNVVSWTAMLVGYGQ 155
H + K G +++ + LV C+ + +S A+ VF+ SY + +++ GY
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 156 NGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTV 215
+G EA+ +F M G+ PD +T +S+C + G Q HG+ + G + V
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFV 171
Query: 216 SNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESML-THG 274
N+LV Y +CG ++ ++F EM+ ++ VSWT+++ Y++ A + + LF M+
Sbjct: 172 QNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE 231
Query: 275 LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
+ P+ VT + V+S C++ +E G +++ + + GI S ++D++ + ++ A
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVY-AFIRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 335 RDFINQ 340
+ ++
Sbjct: 291 KRLFDE 296
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 180/355 (50%), Gaps = 40/355 (11%)
Query: 30 SRQLFCDMRERDSISWTSMIS-----------------------------------GCTQ 54
+R+LF M ERD++SW ++I+ GC Q
Sbjct: 198 ARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQ 257
Query: 55 NGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFK--DNI 112
G + A+ + MR+ D L AC + A++ G + H I + + DN+
Sbjct: 258 TGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNV 317
Query: 113 YAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKY 172
+ L+ MY KC+ ++ A VF++ ++ +W +++ GY Q SEEA + +M
Sbjct: 318 R--NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVA 375
Query: 173 GVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLIS-FVTVSNALVSLYGKCGSIED 231
G P+ TL S++ C +A+L+ G +FH L + + N+LV +Y K G I
Sbjct: 376 GFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVA 435
Query: 232 CHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSR 291
++ M+ +DEV++T+L+ Y G+ + LF+ M G+KPD VT + VLS CS
Sbjct: 436 AKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSH 495
Query: 292 TRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDS 346
++LV +G ++F M E+GI P H+SC++DL+ RAG L +A+D I+ M ++ S
Sbjct: 496 SKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPS 550
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 153/341 (44%), Gaps = 35/341 (10%)
Query: 42 SISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHS 101
+ W +I+ +N L E I ++ M S+ + D +T+ S+L ACG + + G H
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 102 YIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEE 161
I + +K ++Y +AL+ MY + R++ A +F M ++ VSW A++ Y G E
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSE 228
Query: 162 AVKIFCDMQKYGVVPDDFT-----------------LGSV------------------IS 186
A ++F M GV T LG + +
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLK 288
Query: 187 SCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS 246
+C + ++ G + HG+A+ S V N L+++Y KC + +F + +
Sbjct: 289 ACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCT 348
Query: 247 WTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMT 306
W +++S Y+Q K+ E L ML G +P+ +T +L +C+R ++ G + +
Sbjct: 349 WNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYIL 408
Query: 307 KEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ ++ ++D+++++G++ A+ + M RD V
Sbjct: 409 RRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEV 449
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 113/224 (50%), Gaps = 3/224 (1%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMA 92
+F E +W S+ISG Q EA + REM + + T S+L C +
Sbjct: 337 VFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIAN 396
Query: 93 LQEGNQAHSYIIKTG-FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLV 151
LQ G + H YI++ FKD ++LVD+Y K + +A+ V MS ++ V++T+++
Sbjct: 397 LQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLID 456
Query: 152 GYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIALVSGLI 210
GYG G A+ +F +M + G+ PD T+ +V+S+C + + EG + F + G+
Sbjct: 457 GYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIR 516
Query: 211 SFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDE-VSWTALVSA 253
+ + +V LYG+ G + + M +K +W L++A
Sbjct: 517 PCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNA 560
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 13/229 (5%)
Query: 78 YTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE 137
++ S+L+AC V A G Q H++ I +G + + LV Y A+++ +
Sbjct: 44 HSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIEN 103
Query: 138 MSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG 197
+ + W ++ Y +N EE + + M G+ PD FT SV+ +CG + G
Sbjct: 104 SDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFG 163
Query: 198 AQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQF 257
HG VS S + V NAL+S+Y + ++ RLF M +D VSW A+++ Y+
Sbjct: 164 RVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASE 223
Query: 258 GKANETIRLFESMLTHGLKPDKVT-------------FIGVLSVCSRTR 293
G +E LF+ M G++ +T ++G L + SR R
Sbjct: 224 GMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMR 272
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 18/205 (8%)
Query: 154 GQNGYSEEAVKIFC--DMQKYGVVPDDFTL---GSVISSCGNLASLEEGAQFHGIALVSG 208
+G+ +A K F +Q V DD L S++S+C ++ + G Q H + SG
Sbjct: 14 ASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSG 73
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
+ + LV+ Y + + + W L+++Y++ E I ++
Sbjct: 74 VEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYK 133
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH----YSC--II 322
M++ G++PD T+ VL C T V G + HG I + + Y C +I
Sbjct: 134 RMVSKGIRPDAFTYPSVLKACGETLDVAFGRVV-------HGSIEVSSYKSSLYVCNALI 186
Query: 323 DLFSRAGRLEEARDFINQMLFRDSV 347
++ R + AR ++M RD+V
Sbjct: 187 SMYKRFRNMGIARRLFDRMFERDAV 211
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 171/330 (51%), Gaps = 36/330 (10%)
Query: 46 TSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIK 105
+M S + GL REA+ VF M + D+ + S +++C + + G H Y+++
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 106 TGFK--DNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYS---- 159
GF+ DNI +AL+DMY KC +A +F MS K VV+W +++ GY +NG
Sbjct: 366 NGFESWDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAW 423
Query: 160 ---------------------------EEAVKIFCDMQ-KYGVVPDDFTLGSVISSCGNL 191
EEA+++FC MQ + GV D T+ S+ S+CG+L
Sbjct: 424 ETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHL 483
Query: 192 ASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALV 251
+L+ + +G+ V + LV ++ +CG E +F+ +T +D +WTA +
Sbjct: 484 GALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAI 543
Query: 252 SAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGI 311
A + G A I LF+ M+ GLKPD V F+G L+ CS LV++G +IF SM K HG+
Sbjct: 544 GAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGV 603
Query: 312 IPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
P HY C++DL RAG LEEA I M
Sbjct: 604 SPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 170/352 (48%), Gaps = 34/352 (9%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVF-REMRSEMLETDQYTFGSMLT 85
++ +R++F +M ER+ +SWTSMI G + ++A+D+F R +R E + + T +++
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVIS 244
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
AC + L+ G + +++I +G + N SALVDMY KC ++ A+ +F E N+
Sbjct: 245 ACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
AM Y + G + EA+ +F M GV PD ++ S ISSC L ++ G HG L
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
+G S+ + NAL+ +Y KC + R+F M+ K V+W ++V+ Y + G+ +
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 266 LFESML--------------------------------THGLKPDKVTFIGVLSVCSRTR 293
FE+M G+ D VT + + S C
Sbjct: 425 TFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Query: 294 LVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRD 345
++ I+ + K +GI + ++D+FSR G E A N + RD
Sbjct: 485 ALDLAKWIYYYIEK-NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRD 535
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 158/298 (53%), Gaps = 2/298 (0%)
Query: 45 WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYII 104
+ S+I G +GL EAI +F M + + D+YTF L+AC A G Q H I+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVK 164
K G+ +++ ++LV Y +C + SA VF EMS +NVVSWT+M+ GY + ++++AV
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 165 IFCDM-QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLY 223
+F M + V P+ T+ VIS+C L LE G + + SG+ + +ALV +Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 224 GKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFI 283
KC +I+ RLF E + A+ S Y + G E + +F M+ G++PD+++ +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 284 GVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+S CS+ R + G + + +G + + +ID++ + R + A ++M
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLR-NGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 128/230 (55%), Gaps = 3/230 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRS-EMLETDQYTFGSMLT 85
++ + + F M E++ +SW ++ISG Q L EAI+VF M+S E + D T S+ +
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
ACG + AL + YI K G + ++ G+ LVDM+ +C +SA ++F ++ ++V +
Sbjct: 479 ACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA 538
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIA 204
WTA + G +E A+++F DM + G+ PD +++C + +++G + F+ +
Sbjct: 539 WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSML 598
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSA 253
+ G+ +V L G+ G +E+ +L +M + ++V W +L++A
Sbjct: 599 KLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 125/246 (50%), Gaps = 6/246 (2%)
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKC---RSVKSAETVFKEM-SYKNVVSWTAMLVGYGQ 155
H + K G +++ + LV C+ S+ A+ VF+ SY + +++ GY
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 156 NGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTV 215
+G EA+ +F M G+ PD +T +S+C + G Q HG+ + G + V
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFV 171
Query: 216 SNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESML-THG 274
N+LV Y +CG ++ ++F EM+ ++ VSWT+++ Y++ A + + LF M+
Sbjct: 172 QNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE 231
Query: 275 LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
+ P+ VT + V+S C++ +E G +++ + + GI S ++D++ + ++ A
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVY-AFIRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 335 RDFINQ 340
+ ++
Sbjct: 291 KRLFDE 296
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 189/376 (50%), Gaps = 49/376 (13%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHRE--AIDVFREMRS-EMLETDQYTFGSMLTA 86
+ ++F M +R+ SW ++I G +++ + AI +F EM S E +E +++TF S+L A
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCR-------------------- 126
C +QEG Q H +K GF + + S LV MY C
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 127 -------------------------SVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEE 161
K+A +F +M ++VVSW M+ GY NG+ ++
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 162 AVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVS 221
AV++F +M+K + P+ TL SV+ + L SLE G H A SG+ + +AL+
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 222 LYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVT 281
+Y KCG IE +F + ++ ++W+A+++ ++ G+A + I F M G++P V
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 282 FIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+I +L+ CS LVE+G + F M G+ P +HY C++DL R+G L+EA +FI M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 342 LFR-DSVLMQLVGQPC 356
+ D V+ + + C
Sbjct: 438 PIKPDDVIWKALLGAC 453
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 140/250 (56%), Gaps = 8/250 (3%)
Query: 6 VLWWICIRKWDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVF 65
VLW + I D Y+ LG + +R LF MR+R +SW +MISG + NG ++A++VF
Sbjct: 209 VLWNVMI---DGYMRLGDC---KAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVF 262
Query: 66 REMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKC 125
REM+ + + T S+L A + +L+ G H Y +G + + GSAL+DMY KC
Sbjct: 263 REMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC 322
Query: 126 RSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVI 185
++ A VF+ + +NV++W+AM+ G+ +G + +A+ FC M++ GV P D +++
Sbjct: 323 GIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLL 382
Query: 186 SSCGNLASLEEGAQ-FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-D 243
++C + +EEG + F + V GL + +V L G+ G +++ M K D
Sbjct: 383 TACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPD 442
Query: 244 EVSWTALVSA 253
+V W AL+ A
Sbjct: 443 DVIWKALLGA 452
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 126/298 (42%), Gaps = 59/298 (19%)
Query: 92 ALQEGNQAHSYIIKTG-FKDNIYAGSALVDMYCKC-----RSVKSAETVFKEMSYKNVVS 145
+++ +Q H+ IK+G +D + A L +C R + A +F +M +N S
Sbjct: 35 TIRDLSQIHAVFIKSGQMRDTLAAAEIL--RFCATSDLHHRDLDYAHKIFNQMPQRNCFS 92
Query: 146 WTAMLVGYGQNGYSEE--AVKIFCDMQKYGVV-PDDFTLGSVISSCGNLASLEEGAQFHG 202
W ++ G+ ++ + A+ +F +M V P+ FT SV+ +C ++EG Q HG
Sbjct: 93 WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHG 152
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCH----------------------------- 233
+AL G V + LV +Y CG ++D
Sbjct: 153 LALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWN 212
Query: 234 ----------------RLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKP 277
LF +M + VSW ++S YS G + + +F M ++P
Sbjct: 213 VMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRP 272
Query: 278 DKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY-SCIIDLFSRAGRLEEA 334
+ VT + VL SR +E G + + E I I D S +ID++S+ G +E+A
Sbjct: 273 NYVTLVSVLPAISRLGSLELGEWL--HLYAEDSGIRIDDVLGSALIDMYSKCGIIEKA 328
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 184/356 (51%), Gaps = 38/356 (10%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I S LF + D +T+ I+ + NGL +A ++ ++ S + +++TF S+L +
Sbjct: 80 IRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKS 139
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----- 141
C + + G H++++K G + Y + LVD+Y K V SA+ VF M +
Sbjct: 140 C----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSS 195
Query: 142 --------------------------NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV 175
++VSW M+ GY Q+G+ +A+ +F + G
Sbjct: 196 TAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKP 255
Query: 176 -PDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHR 234
PD+ T+ + +S+C + +LE G H S + V V L+ +Y KCGS+E+
Sbjct: 256 KPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVL 315
Query: 235 LFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESML-THGLKPDKVTFIGVLSVCSRTR 293
+F++ KD V+W A+++ Y+ G + + +RLF M GL+P +TFIG L C+
Sbjct: 316 VFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAG 375
Query: 294 LVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM-LFRDSVL 348
LV +G +IFESM +E+GI P +HY C++ L RAG+L+ A + I M + DSVL
Sbjct: 376 LVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVL 431
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 127/231 (54%), Gaps = 4/231 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSE-MLETDQYTFGSMLT 85
+E +R LF M ERD +SW MI G Q+G +A+ +F+++ +E + D+ T + L+
Sbjct: 208 VEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALS 267
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
AC + AL+ G H ++ + + N+ + L+DMY KC S++ A VF + K++V+
Sbjct: 268 ACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVA 327
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKY-GVVPDDFTLGSVISSCGNLASLEEGAQ-FHGI 203
W AM+ GY +GYS++A+++F +MQ G+ P D T + +C + + EG + F +
Sbjct: 328 WNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESM 387
Query: 204 ALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF-KDEVSWTALVSA 253
G+ + LVSL G+ G ++ + M D V W++++ +
Sbjct: 388 GQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGS 438
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 37/258 (14%)
Query: 122 YCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTL 181
Y ++ + +F + ++ +TA + NG ++A ++ + + P++FT
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 182 GSVISSCGNLASLEEGAQFHGIAL----------VSGLISF------------------- 212
S++ SC S + G H L +GL+
Sbjct: 134 SSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 213 --VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESM 270
+ S A+++ Y K G++E LF M +D VSW ++ Y+Q G N+ + LF+ +
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 271 LTHG-LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAG 329
L G KPD++T + LS CS+ +E G I K I + +ID++S+ G
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWI-HVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 330 RLEEARDFINQMLFRDSV 347
LEEA N +D V
Sbjct: 309 SLEEAVLVFNDTPRKDIV 326
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 177/314 (56%), Gaps = 3/314 (0%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
++ +LF M +D +SWT+MISG N L +AID +R M + ++ D+ T ++L+AC
Sbjct: 349 REAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSAC 408
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
+ L G + H IK + + L++MY KC+ + A +F + KNV+SWT
Sbjct: 409 ATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWT 468
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
+++ G N EA+ IF K + P+ TL + +++C + +L G + H L +
Sbjct: 469 SIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRT 527
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
G+ + NAL+ +Y +CG + F+ KD SW L++ YS+ G+ + + LF
Sbjct: 528 GVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELF 586
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSR 327
+ M+ ++PD++TFI +L CS++++V +G F M +++G+ P HY+C++DL R
Sbjct: 587 DRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGR 645
Query: 328 AGRLEEARDFINQM 341
AG L+EA FI +M
Sbjct: 646 AGELQEAHKFIQKM 659
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 169/320 (52%), Gaps = 2/320 (0%)
Query: 29 DSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR-SEMLETDQYTFGSMLTAC 87
D+ +F M ER+ SW ++ G + G EA+ ++ M ++ D YTF +L C
Sbjct: 147 DAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTC 206
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
GG+ L G + H ++++ G++ +I +AL+ MY KC VKSA +F M ++++SW
Sbjct: 207 GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWN 266
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
AM+ GY +NG E +++F M+ V PD TL SVIS+C L G H + +
Sbjct: 267 AMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT 326
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
G ++V N+L +Y GS + +LFS M KD VSWT ++S Y ++ I +
Sbjct: 327 GFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY 386
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSR 327
M +KPD++T VLS C+ ++ G ++ + K +I + +I+++S+
Sbjct: 387 RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR-LISYVIVANNLINMYSK 445
Query: 328 AGRLEEARDFINQMLFRDSV 347
+++A D + + ++ +
Sbjct: 446 CKCIDKALDIFHNIPRKNVI 465
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 171/309 (55%), Gaps = 4/309 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++ +R LF M RD ISW +MISG +NG+ E +++F MR ++ D T S+++A
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + + G H+Y+I TGF +I ++L MY S + AE +F M K++VSW
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSW 366
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
T M+ GY N ++A+ + M + V PD+ T+ +V+S+C L L+ G + H +A+
Sbjct: 367 TTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK 426
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
+ LIS+V V+N L+++Y KC I+ +F + K+ +SWT++++ + E + +
Sbjct: 427 ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-I 485
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY-SCIIDLF 325
F + L+P+ +T L+ C+R + G +I + + + + D + ++D++
Sbjct: 486 FLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTG--VGLDDFLPNALLDMY 543
Query: 326 SRAGRLEEA 334
R GR+ A
Sbjct: 544 VRCGRMNTA 552
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 145/300 (48%), Gaps = 2/300 (0%)
Query: 49 ISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGF 108
+ G NG EA+ + M+ + D+ F +++ C A +EG++ +S + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 109 KDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCD 168
+ G+A + M+ + ++ A VF +MS +N+ SW ++ GY + GY +EA+ ++
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 169 MQKY-GVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCG 227
M GV PD +T V+ +CG + L G + H + G + V NAL+++Y KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 228 SIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLS 287
++ LF M +D +SW A++S Y + G +E + LF +M + PD +T V+S
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 288 VCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
C G I + + I S + ++ AG EA ++M +D V
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNS-LTQMYLNAGSWREAEKLFSRMERKDIV 364
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 169/305 (55%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
++++F +R + SW ++I G Q+ R ++D +M+ L D +T S+L+AC
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
+ +L+ G + H +II+ + +++ +++ +Y C + + + +F M K++VSW +
Sbjct: 509 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 568
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
+ GY QNG+ + A+ +F M YG+ ++ V +C L SL G + H AL L
Sbjct: 569 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 628
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFES 269
++ +L+ +Y K GSI ++F+ + K SW A++ Y G A E I+LFE
Sbjct: 629 EDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEE 688
Query: 270 MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAG 329
M G PD +TF+GVL+ C+ + L+ +G + + M G+ P HY+C+ID+ RAG
Sbjct: 689 MQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAG 748
Query: 330 RLEEA 334
+L++A
Sbjct: 749 QLDKA 753
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 146/287 (50%), Gaps = 10/287 (3%)
Query: 10 ICIRKWDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR 69
+C R Y + G +DSR +F +R ++ W ++IS ++N L+ E ++ F EM
Sbjct: 122 LCTRIITMYAMCGS---PDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 70 SEM-LETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSV 128
S L D +T+ ++ AC G+ + G H ++KTG ++++ G+ALV Y V
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 129 KSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKY----GVVPDDFTLGSV 184
A +F M +N+VSW +M+ + NG+SEE+ + +M + +PD TL +V
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 185 ISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDE 244
+ C + G HG A+ L + ++NAL+ +Y KCG I + +F K+
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 358
Query: 245 VSWTALVSAYSQFGKANETIRLFESMLTHG--LKPDKVTFIGVLSVC 289
VSW +V +S G + T + ML G +K D+VT + + VC
Sbjct: 359 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 161/344 (46%), Gaps = 13/344 (3%)
Query: 9 WICIRKWDSYLVLGRLLM--------IEDSRQLFCDMRERDSISWTSMISGCTQNGLHRE 60
W + D LVL LM I +++ +F ++ +SW +M+ G + G
Sbjct: 317 WAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHG 376
Query: 61 AIDVFREMRS--EMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSAL 118
DV R+M + E ++ D+ T + + C L + H Y +K F N +A
Sbjct: 377 TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAF 436
Query: 119 VDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDD 178
V Y KC S+ A+ VF + K V SW A++ G+ Q+ ++ M+ G++PD
Sbjct: 437 VASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDS 496
Query: 179 FTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSE 238
FT+ S++S+C L SL G + HG + + L + V +++SLY CG + LF
Sbjct: 497 FTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDA 556
Query: 239 MTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKG 298
M K VSW +++ Y Q G + + +F M+ +G++ ++ + V CS + G
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616
Query: 299 NQIFESMTKEHGIIPIQDHYSC-IIDLFSRAGRLEEARDFINQM 341
+ K ++ +C +ID++++ G + ++ N +
Sbjct: 617 REAHAYALKH--LLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 658
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 6/229 (2%)
Query: 79 TFGSMLTACGGVMALQEGNQAHSYII-KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE 137
G +L A G ++ G + H + T +++ + ++ MY C S + VF
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA 145
Query: 138 MSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDM-QKYGVVPDDFTLGSVISSCGNLASLEE 196
+ KN+ W A++ Y +N +E ++ F +M ++PD FT VI +C ++ +
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 197 GAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQ 256
G HG+ + +GL+ V V NALVS YG G + D +LF M ++ VSW +++ +S
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 257 FGKANETIRLFESMLTH----GLKPDKVTFIGVLSVCSRTRLVEKGNQI 301
G + E+ L M+ PD T + VL VC+R R + G +
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I S ++F ++E+ + SW +MI G +GL +EAI +F EM+ D TF +LTA
Sbjct: 648 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 707
Query: 87 CGGVMALQEGNQAHSYIIKT-GFKDNIYAGSALVDMYCKCRSV-KSAETVFKEMSYK-NV 143
C + EG + + + G K N+ + ++DM + + K+ V +EMS + +V
Sbjct: 708 CNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV 767
Query: 144 VSWTAML 150
W ++L
Sbjct: 768 GIWKSLL 774
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 149/270 (55%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I D R++F M R++++WTS+I+ + G EAI +FR M+ L + T S+L A
Sbjct: 335 ISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRA 394
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
CG V AL G + H+ IIK + N+Y GS LV +YCKC + A V +++ ++VVSW
Sbjct: 395 CGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSW 454
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
TAM+ G G+ EA+ +M + GV P+ FT S + +C N SL G H IA
Sbjct: 455 TAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKK 514
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
+ +S V V +AL+ +Y KCG + + R+F M K+ VSW A++ Y++ G E ++L
Sbjct: 515 NHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKL 574
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVE 296
M G + D F +LS C L E
Sbjct: 575 MYRMEAEGFEVDDYIFATILSTCGDIELDE 604
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 168/305 (55%), Gaps = 1/305 (0%)
Query: 37 MRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEG 96
M E+D ISWT++IS C++ G +AI +F M + +++T S+L AC AL+ G
Sbjct: 244 MEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFG 303
Query: 97 NQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQN 156
Q HS ++K K +++ G++L+DMY KC + VF MS +N V+WT+++ + +
Sbjct: 304 RQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHARE 363
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
G+ EEA+ +F M++ ++ ++ T+ S++ +CG++ +L G + H + + + V +
Sbjct: 364 GFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIG 423
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLK 276
+ LV LY KCG D + ++ +D VSWTA++S S G +E + + M+ G++
Sbjct: 424 STLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVE 483
Query: 277 PDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARD 336
P+ T+ L C+ + + G I K H + + S +I ++++ G + EA
Sbjct: 484 PNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG-SALIHMYAKCGFVSEAFR 542
Query: 337 FINQM 341
+ M
Sbjct: 543 VFDSM 547
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 170/322 (52%), Gaps = 9/322 (2%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFRE-MRSEMLETDQYTFGSMLTACG 88
+R++F M E+++++WT+MI G + GL EA +F + ++ + T++ F +L C
Sbjct: 136 ARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCS 195
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
+ G Q H ++K G N+ S+LV Y +C + SA F M K+V+SWTA
Sbjct: 196 RRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTA 254
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
++ + G+ +A+ +F M + +P++FT+ S++ +C +L G Q H + +
Sbjct: 255 VISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRM 314
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
+ + V V +L+ +Y KCG I DC ++F M+ ++ V+WT++++A+++ G E I LF
Sbjct: 315 IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFR 374
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY---SCIIDLF 325
M L + +T + +L C + G ++ + K I+ + S ++ L+
Sbjct: 375 IMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN----SIEKNVYIGSTLVWLY 430
Query: 326 SRAGRLEEARDFINQMLFRDSV 347
+ G +A + + Q+ RD V
Sbjct: 431 CKCGESRDAFNVLQQLPSRDVV 452
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 126/251 (50%), Gaps = 7/251 (2%)
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYS 159
H+ +K IY G+ L+ + + A VF M KN V+WTAM+ GY + G
Sbjct: 105 HAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLE 164
Query: 160 EEAVKIFCDMQKYGV-VPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNA 218
+EA +F D K+G+ ++ +++ C A E G Q HG + G+ + + V ++
Sbjct: 165 DEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLI-VESS 223
Query: 219 LVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPD 278
LV Y +CG + R F M KD +SWTA++SA S+ G + I +F ML H P+
Sbjct: 224 LVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPN 283
Query: 279 KVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY--SCIIDLFSRAGRLEEARD 336
+ T +L CS + + G Q+ + K + D + + ++D++++ G + + R
Sbjct: 284 EFTVCSILKACSEEKALRFGRQVHSLVVKR---MIKTDVFVGTSLMDMYAKCGEISDCRK 340
Query: 337 FINQMLFRDSV 347
+ M R++V
Sbjct: 341 VFDGMSNRNTV 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
Query: 199 QFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFG 258
+ H +AL + N L+S + G + ++F M K+ V+WTA++ Y ++G
Sbjct: 103 RIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYG 162
Query: 259 KANETIRLFESMLTHGLK-PDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEH-GIIPIQD 316
+E LFE + HG++ ++ F+ +L++CSR E G Q+ +M K G + ++
Sbjct: 163 LEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVE- 221
Query: 317 HYSCIIDLFSRAGRLEEARDFINQMLFRDSVLMQLVGQPC 356
S ++ +++ G L A + M +D + V C
Sbjct: 222 --SSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISAC 259
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 188 bits (477), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 184/393 (46%), Gaps = 74/393 (18%)
Query: 29 DSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT--- 85
D+ LF +M R+ +SW MI G +Q A+ +F M+ E + D+ T+ S+L+
Sbjct: 211 DAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHS 270
Query: 86 --------------------------------ACGGVMALQEGNQAHSYIIKTGFKDNIY 113
C + AL + H Y+IK GF++ +
Sbjct: 271 QCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLP 330
Query: 114 AGSALVDMYCKCRSVKSAETVFKEMSYK-------------------------------- 141
+ +AL+ +Y K VK AE +F+++ K
Sbjct: 331 SRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMN 390
Query: 142 -------NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASL 194
NVV+WT+++ G G +++++ F MQ V+ + T+ ++S C L +L
Sbjct: 391 HVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPAL 450
Query: 195 EEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAY 254
G + HG + + + + V NALV++Y KCG + + +F + KD +SW +++ Y
Sbjct: 451 NLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGY 510
Query: 255 SQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPI 314
G A + + +F+ M++ G PD + + VLS CS LVEKG +IF SM+K G+ P
Sbjct: 511 GMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQ 570
Query: 315 QDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
Q+HY+CI+DL R G L+EA + + M V
Sbjct: 571 QEHYACIVDLLGRVGFLKEASEIVKNMPMEPKV 603
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 143/318 (44%), Gaps = 52/318 (16%)
Query: 20 VLGRLLMIEDSRQLF--------CDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSE 71
V RL ++ D+R +F D+R W S++ +GL+ A++++R MR
Sbjct: 98 VYARLGLLLDARNVFETVSLVLLSDLR-----LWNSILKANVSHGLYENALELYRGMRQR 152
Query: 72 MLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSA 131
L D Y +L AC + H+ +I+ G K+N++ + L+ +Y K + A
Sbjct: 153 GLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDA 212
Query: 132 ETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISS---- 187
+F EM +N +SW M+ G+ Q E AVKIF MQ+ PD+ T SV+S
Sbjct: 213 YNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQC 272
Query: 188 -------------------------------CGNLASLEEGAQFHGIALVSGLISFVTVS 216
C L +L + HG + G ++
Sbjct: 273 GKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSR 332
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESM--LTH- 273
NAL+ +YGK G ++D LF ++ K SW +L++++ GK +E + LF + + H
Sbjct: 333 NALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHV 392
Query: 274 -GLKPDKVTFIGVLSVCS 290
+K + VT+ V+ C+
Sbjct: 393 CNVKANVVTWTSVIKGCN 410
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 131/247 (53%), Gaps = 16/247 (6%)
Query: 12 IRKWDS----YLVLGRLLMIEDSRQLFCDMRERDSI--------SWTSMISGCTQNGLHR 59
I W+S ++ G+L +++ LF ++ E + + +WTS+I GC G
Sbjct: 360 IESWNSLITSFVDAGKL---DEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGD 416
Query: 60 EAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALV 119
++++ FR+M+ + + T +L+ C + AL G + H ++I+T +NI +ALV
Sbjct: 417 DSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALV 476
Query: 120 DMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDF 179
+MY KC + VF+ + K+++SW +++ GYG +G++E+A+ +F M G PD
Sbjct: 477 NMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGI 536
Query: 180 TLGSVISSCGNLASLEEGAQ-FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSE 238
L +V+S+C + +E+G + F+ ++ GL +V L G+ G +++ +
Sbjct: 537 ALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKN 596
Query: 239 MTFKDEV 245
M + +V
Sbjct: 597 MPMEPKV 603
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 6/222 (2%)
Query: 75 TDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGF--KDNIYAGSALVDMYCKCRSVKSAE 132
DQ F G + Q+ Q H+ ++ + F + A + L+ +Y + + A
Sbjct: 51 NDQSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAAN-LISVYARLGLLLDAR 109
Query: 133 TVFKEMSY---KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCG 189
VF+ +S ++ W ++L +G E A++++ M++ G+ D + L ++ +C
Sbjct: 110 NVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACR 169
Query: 190 NLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTA 249
L FH + GL + V N L++LY K G + D + LF EM ++ +SW
Sbjct: 170 YLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNV 229
Query: 250 LVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSR 291
++ +SQ +++FE M KPD+VT+ VLS S+
Sbjct: 230 MIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQ 271
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 188 bits (477), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 184/332 (55%), Gaps = 10/332 (3%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTF------ 80
+ED+R++F ++ +R+ +SWTSMI G NG +A+ +F+++ + + D F
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGL 186
Query: 81 GSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRS--VKSAETVFKEM 138
S+++AC V A HS++IK GF + G+ L+D Y K V A +F ++
Sbjct: 187 VSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246
Query: 139 SYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVP-DDFTLGSVISSCGNLASLEEG 197
K+ VS+ +++ Y Q+G S EA ++F + K VV + TL +V+ + + +L G
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG 306
Query: 198 AQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQF 257
H + GL V V +++ +Y KCG +E + F M K+ SWTA+++ Y
Sbjct: 307 KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMH 366
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH 317
G A + + LF +M+ G++P+ +TF+ VL+ CS L +G + F +M G+ P +H
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH 426
Query: 318 YSCIIDLFSRAGRLEEARDFINQMLFR-DSVL 348
Y C++DL RAG L++A D I +M + DS++
Sbjct: 427 YGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 154/313 (49%), Gaps = 16/313 (5%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D SW S+I+ ++G EA+ F MR L + +F + AC + + G Q H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSE 160
G++ +I+ SAL+ MY C ++ A VF E+ +N+VSWT+M+ GY NG +
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 161 EAVKIFCDM------QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT 214
+AV +F D+ + D L SVIS+C + + H + G V+
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 215 VSNALVSLYGKCGS--IEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLT 272
V N L+ Y K G + ++F ++ KD VS+ +++S Y+Q G +NE +F ++
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 273 HGLKP-DKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY---SCIIDLFSRA 328
+ + + +T VL S + + G I + + + + ++D + IID++ +
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR----MGLEDDVIVGTSIIDMYCKC 335
Query: 329 GRLEEARDFINQM 341
GR+E AR ++M
Sbjct: 336 GRVETARKAFDRM 348
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 11/215 (5%)
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
+V SW +++ ++G S EA+ F M+K + P + I +C +L + G Q H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKAN 261
A V G S + VS+AL+ +Y CG +ED ++F E+ ++ VSWT+++ Y G A
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 262 ETIRLFESMLTHGLKPDKVTF------IGVLSVCSRTRLVEKG-NQIFESMTKEHGIIPI 314
+ + LF+ +L D F + V+S CS R+ KG + S + G
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS--RVPAKGLTESIHSFVIKRGFDRG 217
Query: 315 QDHYSCIIDLFSRAGR--LEEARDFINQMLFRDSV 347
+ ++D +++ G + AR +Q++ +D V
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRV 252
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 187 bits (476), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 166/305 (54%)
Query: 31 RQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGV 90
R++F ++R++ISWT+++SG NG +A+ M+ E D T ++L C +
Sbjct: 372 RRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAEL 431
Query: 91 MALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAML 150
A+++G + H Y +K F N+ ++L+ MY KC + +F + +NV +WTAM+
Sbjct: 432 RAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMI 491
Query: 151 VGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLI 210
Y +N +++F M PD T+G V++ C +L +L+ G + HG L
Sbjct: 492 DCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFE 551
Query: 211 SFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESM 270
S VS ++ +YGKCG + + F + K ++WTA++ AY + I FE M
Sbjct: 552 SIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQM 611
Query: 271 LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGR 330
++ G P+ TF VLS+CS+ V++ + F M + + + P ++HYS +I+L +R GR
Sbjct: 612 VSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGR 671
Query: 331 LEEAR 335
+EEA+
Sbjct: 672 VEEAQ 676
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 172/322 (53%), Gaps = 8/322 (2%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSE-MLE 74
D Y G++ + +R++F ++ ERD + W +MI+G N EA+ +FR M SE +
Sbjct: 257 DMYFKCGKVGL---ARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIY 313
Query: 75 TDQYTFGSMLTACGGVMALQEGNQAHSYIIKT-GFKDNIYAGSALVDMYCKCRSVKSAET 133
+ ++L G V AL+ G + H++++K+ + + + S L+D+YCKC + S
Sbjct: 314 PNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRR 373
Query: 134 VFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLAS 193
VF +N +SWTA++ GY NG ++A++ MQ+ G PD T+ +V+ C L +
Sbjct: 374 VFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRA 433
Query: 194 LEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSA 253
+++G + H AL + + V++ +L+ +Y KCG E RLF + ++ +WTA++
Sbjct: 434 IKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDC 493
Query: 254 YSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIF-ESMTKEHGII 312
Y + I +F ML +PD VT VL+VCS + ++ G ++ + KE I
Sbjct: 494 YVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESI 553
Query: 313 PIQDHYSCIIDLFSRAGRLEEA 334
P + II ++ + G L A
Sbjct: 554 PFVS--ARIIKMYGKCGDLRSA 573
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 150/279 (53%), Gaps = 4/279 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHR--EAIDVFREMRSEMLETDQYTFGSML 84
++D++++F + + SW +++ G +G R + + F EMR ++ + Y+ ++
Sbjct: 162 VKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVF 221
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV 144
+ G AL++G + H+ IK G ++++ ++LVDMY KC V A VF E+ +++V
Sbjct: 222 KSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIV 281
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDM-QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGI 203
W AM+ G N EA+ +F M + + P+ L +++ G++ +L+ G + H
Sbjct: 282 VWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAH 341
Query: 204 ALVS-GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
L S + V + L+ LY KCG + R+F ++ +SWTAL+S Y+ G+ ++
Sbjct: 342 VLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQ 401
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQI 301
+R M G +PD VT VL VC+ R +++G +I
Sbjct: 402 ALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 153/314 (48%), Gaps = 17/314 (5%)
Query: 38 RERDSISWTSMISGCTQNGLHRE------------AIDVFREMRSEMLETDQYTFGSMLT 85
RERD+ + + +HR+ A+ + + + + TF ++L
Sbjct: 60 RERDAFPSSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLE 119
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
AC +L G Q H +I G + N + + LV MY C SVK A+ VF E + NV S
Sbjct: 120 ACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYS 179
Query: 146 WTAMLVGY---GQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
W A+L G G+ Y ++ + F +M++ GV + ++L +V S ++L +G + H
Sbjct: 180 WNALLRGTVISGKKRY-QDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHA 238
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
+A+ +GL + V + +LV +Y KCG + R+F E+ +D V W A+++ + + E
Sbjct: 239 LAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWE 298
Query: 263 TIRLFESMLT-HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCI 321
+ LF +M++ + P+ V +L V + ++ G ++ + K + +S +
Sbjct: 299 ALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGL 358
Query: 322 IDLFSRAGRLEEAR 335
IDL+ + G + R
Sbjct: 359 IDLYCKCGDMASGR 372
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 187/372 (50%), Gaps = 43/372 (11%)
Query: 15 WDS----YLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRS 70
W+S Y+ LG + E ++F M D S+ MI G + G EA+ ++ +M S
Sbjct: 169 WNSLVKFYMELGNFGVAE---KVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVS 225
Query: 71 EMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTG--FKDNIYAGSALVDMYCKCRS- 127
+ +E D+YT S+L CG + ++ G H +I + G + N+ +AL+DMY KC+
Sbjct: 226 DGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKES 285
Query: 128 ------------------------------VKSAETVFKEMSYKNVVSWTAMLVGYGQNG 157
+++A+ VF +M +++VSW ++L GY + G
Sbjct: 286 GLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKG 345
Query: 158 YSEEAVK-IFCDMQKY-GVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTV 215
+ V+ +F +M V PD T+ S+IS N L G HG+ + L +
Sbjct: 346 CDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFL 405
Query: 216 SNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGL 275
S+AL+ +Y KCG IE +F T KD WT++++ + G + ++LF M G+
Sbjct: 406 SSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGV 465
Query: 276 KPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEAR 335
P+ VT + VL+ CS + LVE+G +F M + G P +HY ++DL RAGR+EEA+
Sbjct: 466 TPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAK 525
Query: 336 DFI-NQMLFRDS 346
D + +M R S
Sbjct: 526 DIVQKKMPMRPS 537
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 146/276 (52%), Gaps = 12/276 (4%)
Query: 12 IRKWDSYLV-LGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAI-DVFREMR 69
+R W++ +V RL +E ++ +F M +RD +SW S++ G ++ G + + ++F EM
Sbjct: 300 MRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMT 359
Query: 70 -SEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSV 128
E ++ D+ T S+++ L G H +I+ K + + SAL+DMYCKC +
Sbjct: 360 IVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGII 419
Query: 129 KSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSC 188
+ A VFK + K+V WT+M+ G +G ++A+++F MQ+ GV P++ TL +V+++C
Sbjct: 420 ERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTAC 479
Query: 189 GNLASLEEGAQ-FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLF-SEMTFKDEVS 246
+ +EEG F+ + G +LV L + G +E+ + +M + S
Sbjct: 480 SHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQS 539
Query: 247 -WTALVSAYSQFGKANETIRLFESMLTHGLK--PDK 279
W +++SA + E I E LT LK P+K
Sbjct: 540 MWGSILSAC----RGGEDIETAELALTELLKLEPEK 571
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 162/348 (46%), Gaps = 55/348 (15%)
Query: 30 SRQLFCDMRERDSI-SWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACG 88
++ LF + ++ + +MIS + + E ++ M + D+ TF ++ A
Sbjct: 87 AKLLFLNFTPNPNVFVYNTMISAVSSS--KNECFGLYSSMIRHRVSPDRQTFLYLMKASS 144
Query: 89 GVMALQEGNQAHSYIIKTG-FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
L E Q H +II +G Y ++LV Y + + AE VF M + +V S+
Sbjct: 145 ---FLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFN 201
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
M+VGY + G+S EA+K++ M G+ PD++T+ S++ CG+L+ + G HG
Sbjct: 202 VMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERR 261
Query: 208 GLI--SFVTVSNALVSLYGKC-------------------------------GSIEDCHR 234
G + S + +SNAL+ +Y KC G +E
Sbjct: 262 GPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQA 321
Query: 235 LFSEMTFKDEVSWTALVSAYSQFGKANETIR--LFESMLTHGLKPDKVTFIGVLSVCSRT 292
+F +M +D VSW +L+ YS+ G T+R +E + +KPD+VT + ++S +
Sbjct: 322 VFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANN 381
Query: 293 RLVEKGNQIFESMTKEHG-IIPIQ---DHY--SCIIDLFSRAGRLEEA 334
+ G + HG +I +Q D + S +ID++ + G +E A
Sbjct: 382 GELSHGRWV-------HGLVIRLQLKGDAFLSSALIDMYCKCGIIERA 422
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 182/347 (52%), Gaps = 31/347 (8%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
+++ +R +F + D SW MISG + + E+I++ EM ++ T +L+
Sbjct: 185 LMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLS 244
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKC----------RSVKS----- 130
AC V + H Y+ + + ++ +ALV+ Y C RS+K+
Sbjct: 245 ACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVIS 304
Query: 131 ----------------AETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGV 174
A T F +M ++ +SWT M+ GY + G E+++IF +MQ G+
Sbjct: 305 WTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
Query: 175 VPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHR 234
+PD+FT+ SV+++C +L SLE G + + + V V NAL+ +Y KCG E +
Sbjct: 365 IPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQK 424
Query: 235 LFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRL 294
+F +M +D+ +WTA+V + G+ E I++F M ++PD +T++GVLS C+ + +
Sbjct: 425 VFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGM 484
Query: 295 VEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
V++ + F M +H I P HY C++D+ RAG ++EA + + +M
Sbjct: 485 VDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKM 531
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 137/251 (54%), Gaps = 7/251 (2%)
Query: 5 EVLWWICIRKWDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDV 64
+V+ W I K Y+ G L + +R F M RD ISWT MI G + G E++++
Sbjct: 301 DVISWTSIVK--GYVERGNLKL---ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEI 355
Query: 65 FREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCK 124
FREM+S + D++T S+LTAC + +L+ G +YI K K+++ G+AL+DMY K
Sbjct: 356 FREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFK 415
Query: 125 CRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSV 184
C + A+ VF +M ++ +WTAM+VG NG +EA+K+F MQ + PDD T V
Sbjct: 416 CGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGV 475
Query: 185 ISSCGNLASLEEGAQFHGIALVSGLISFVTVS-NALVSLYGKCGSIEDCHRLFSEMTF-K 242
+S+C + +++ +F I V +V + G+ G +++ + + +M
Sbjct: 476 LSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNP 535
Query: 243 DEVSWTALVSA 253
+ + W AL+ A
Sbjct: 536 NSIVWGALLGA 546
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 159/351 (45%), Gaps = 43/351 (12%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC---G 88
+LF + E D + W +MI G ++ E + ++ M E + D +TF +L G
Sbjct: 89 KLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDG 148
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
G +A G + H +++K G N+Y +ALV MY C + A VF ++V SW
Sbjct: 149 GALAC--GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
M+ GY + EE++++ +M++ V P TL V+S+C + + + H
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKA-------- 260
+ + NALV+ Y CG ++ R+F M +D +SWT++V Y + G
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326
Query: 261 -----------------------NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEK 297
NE++ +F M + G+ PD+ T + VL+ C+ +E
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEI 386
Query: 298 GNQIFESMTKEHGIIPIQDHY---SCIIDLFSRAGRLEEARDFINQMLFRD 345
G I + K I++ + +ID++ + G E+A+ + M RD
Sbjct: 387 GEWIKTYIDKNK----IKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRD 433
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 125/281 (44%), Gaps = 7/281 (2%)
Query: 70 SEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCK--CRS 127
+E + D F S+L C + Q HS I G N L +C
Sbjct: 27 TESISNDYSRFISILGVCK---TTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGH 83
Query: 128 VKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISS 187
V A +F ++ +VV W M+ G+ + E V+++ +M K GV PD T +++
Sbjct: 84 VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNG 143
Query: 188 CG-NLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS 246
+ +L G + H + GL S + V NALV +Y CG ++ +F +D S
Sbjct: 144 LKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFS 203
Query: 247 WTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMT 306
W ++S Y++ + E+I L M + + P VT + VLS CS+ + + ++ E ++
Sbjct: 204 WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVS 263
Query: 307 KEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
E P + +++ ++ G ++ A M RD +
Sbjct: 264 -ECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVI 303
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 179/359 (49%), Gaps = 35/359 (9%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
+IE + +LF + E+D +SW +MI GC + EA+ + EM ++ + +L+
Sbjct: 254 LIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLS 313
Query: 86 ACGGVMALQEGNQAHSYIIKTGF-------------------------------KDNIYA 114
A + +G Q H I+K GF KD+I +
Sbjct: 314 ASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIAS 373
Query: 115 GSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDM-QKYG 173
+AL+ + K V+ A VF + K++ SW AM+ GY Q+ + A+ +F +M
Sbjct: 374 RNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQ 433
Query: 174 VVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCH 233
V PD T+ SV S+ +L SLEEG + H S + ++ A++ +Y KCGSIE
Sbjct: 434 VKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETAL 493
Query: 234 RLFSE---MTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCS 290
+F + ++ W A++ + G A + L+ + + +KP+ +TF+GVLS C
Sbjct: 494 NIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACC 553
Query: 291 RTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLM 349
LVE G FESM +HGI P HY C++DL +AGRLEEA++ I +M + V++
Sbjct: 554 HAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMI 612
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 172/389 (44%), Gaps = 69/389 (17%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
D Y+ RL D+ +LF M ER +S+T++I G QN EA+++FREMR+ +
Sbjct: 115 DGYVRSRRLW---DALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIML 171
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
++ T ++++AC + + + S IK + ++ + L+ MYC C +K A +F
Sbjct: 172 NEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLF 231
Query: 136 KEMSYKN-------------------------------VVSWTAMLVGYGQNGYSEEAVK 164
EM +N +VSW M+ G + +EA+
Sbjct: 232 DEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALV 291
Query: 165 IFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG----------LISFVT 214
+ +M + G+ P + + ++S+ +G Q HG + G +I F
Sbjct: 292 YYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYA 351
Query: 215 VS---------------------NALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSA 253
VS NAL++ + K G +E +F + KD SW A++S
Sbjct: 352 VSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISG 411
Query: 254 YSQFGKANETIRLFESMLTHG-LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGII 312
Y+Q + LF M++ +KPD +T + V S S +E+G + + + I
Sbjct: 412 YAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLN--FSTI 469
Query: 313 PIQDHYS-CIIDLFSRAGRLEEARDFINQ 340
P D+ + IID++++ G +E A + +Q
Sbjct: 470 PPNDNLTAAIIDMYAKCGSIETALNIFHQ 498
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 62/289 (21%)
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE---- 137
S L +C + G Q H ++K+G N Y +++++MY KCR + AE+VF++
Sbjct: 46 SALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKL 105
Query: 138 ---------------------------MSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQ 170
M ++ VS+T ++ GY QN EA+++F +M+
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 165
Query: 171 KYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIE 230
G++ ++ TL +VIS+C +L + + +A+ L V VS L+ +Y C ++
Sbjct: 166 NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLK 225
Query: 231 DCHRLFSEMTFKDEVSWTALVSAYSQFG-------------------------------K 259
D +LF EM ++ V+W +++ YS+ G +
Sbjct: 226 DARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQ 285
Query: 260 ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKE 308
+E + + ML G+KP +V + +LS +R+ KG Q+ ++ K
Sbjct: 286 LDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKR 334
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 176/334 (52%), Gaps = 42/334 (12%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
D Y GR I ++R++F +M ERD I+WT+M+S +R +D
Sbjct: 912 DFYSATGR---IREARKVFDEMPERDDIAWTTMVSA------YRRVLD------------ 950
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
M +A + E N+A S + L++ Y +++ AE++F
Sbjct: 951 -------MDSANSLANQMSEKNEATS--------------NCLINGYMGLGNLEQAESLF 989
Query: 136 KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE 195
+M K+++SWT M+ GY QN EA+ +F M + G++PD+ T+ +VIS+C +L LE
Sbjct: 990 NQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLE 1049
Query: 196 EGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYS 255
G + H L +G + V + +ALV +Y KCGS+E +F + K+ W +++ +
Sbjct: 1050 IGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLA 1109
Query: 256 QFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ 315
G A E +++F M +KP+ VTF+ V + C+ LV++G +I+ SM ++ I+
Sbjct: 1110 AHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNV 1169
Query: 316 DHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLM 349
+HY ++ LFS+AG + EA + I M F + ++
Sbjct: 1170 EHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVI 1203
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 135/238 (56%), Gaps = 5/238 (2%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
+ Y+ LG L E + LF M +D ISWT+MI G +QN +REAI VF +M E +
Sbjct: 974 NGYMGLGNL---EQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIP 1030
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
D+ T ++++AC + L+ G + H Y ++ GF ++Y GSALVDMY KC S++ A VF
Sbjct: 1031 DEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVF 1090
Query: 136 KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE 195
+ KN+ W +++ G +G+++EA+K+F M+ V P+ T SV ++C + ++
Sbjct: 1091 FNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVD 1150
Query: 196 EGAQFHGIALVS-GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALV 251
EG + + + ++S V +V L+ K G I + L M F+ + V W AL+
Sbjct: 1151 EGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 112/296 (37%), Gaps = 69/296 (23%)
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEA 162
+IKT + + + + + A + +M NV + A+ G+ + +
Sbjct: 796 MIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRS 855
Query: 163 VKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSL 222
++++ M + V P +T S++ + + E Q H G V + L+
Sbjct: 856 LELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGF--HVKIQTTLIDF 913
Query: 223 YGKCGSIEDCHRLFSEMTFKDEVSWTALVSAY-------------SQFGKANETI----- 264
Y G I + ++F EM +D+++WT +VSAY +Q + NE
Sbjct: 914 YSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLI 973
Query: 265 -------------RLFESM-------------------------------LTHGLKPDKV 280
LF M + G+ PD+V
Sbjct: 974 NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEV 1033
Query: 281 TFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY--SCIIDLFSRAGRLEEA 334
T V+S C+ ++E G ++ T ++G + D Y S ++D++S+ G LE A
Sbjct: 1034 TMSTVISACAHLGVLEIGKEV-HMYTLQNGF--VLDVYIGSALVDMYSKCGSLERA 1086
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 184 bits (467), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 173/316 (54%), Gaps = 11/316 (3%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I+++ LF M RD +SWT+M+ G +NG +D R + M E + ++ +M+T
Sbjct: 187 IDEAMNLFERMPRRDVVSWTAMVDGLAKNG----KVDEARRLFDCMPERNIISWNAMITG 242
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
+ E +Q + + F + + ++ + + R + A +F M KNV+SW
Sbjct: 243 YAQNNRIDEADQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLFDRMPEKNVISW 298
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVV-PDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
T M+ GY +N +EEA+ +F M + G V P+ T S++S+C +LA L EG Q H +
Sbjct: 299 TTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLIS 358
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSE--MTFKDEVSWTALVSAYSQFGKANET 263
S V++AL+++Y K G + ++F + +D +SW ++++ Y+ G E
Sbjct: 359 KSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEA 418
Query: 264 IRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIID 323
I ++ M HG KP VT++ +L CS LVEKG + F+ + ++ + ++HY+C++D
Sbjct: 419 IEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVD 478
Query: 324 LFSRAGRLEEARDFIN 339
L RAGRL++ +FIN
Sbjct: 479 LCGRAGRLKDVTNFIN 494
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 148/327 (45%), Gaps = 56/327 (17%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I ++R+LF + ERD ++WT +I+G + G REA ++F + S
Sbjct: 62 IAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDS---------------- 105
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
+ N+ +A+V Y + + + AE +F+EM +NVVSW
Sbjct: 106 ----------------------RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSW 143
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
M+ GY Q+G ++A+++F +M + +V + S++ + ++E
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFERMPR 199
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
++S+ A+V K G +++ RLF M ++ +SW A+++ Y+Q + +E +L
Sbjct: 200 RDVVSWT----AMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQL 255
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
F+ M G + R R + K +F+ M +++ I ++ +I +
Sbjct: 256 FQVMPERDFASWNTMITGFI----RNREMNKACGLFDRMPEKNVI-----SWTTMITGYV 306
Query: 327 RAGRLEEARDFINQMLFRDSVLMQLVG 353
EEA + ++ML RD + VG
Sbjct: 307 ENKENEEALNVFSKML-RDGSVKPNVG 332
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 118 LVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIF--CDMQKYGVV 175
L+ CK + A +F + ++VV+WT ++ GY + G EA ++F D +K V
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 176 PDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS-NALVSLYGKCGSIEDCHR 234
G + S ++A + L + VS N ++ Y + G I+
Sbjct: 112 WTAMVSGYLRSKQLSIAEM----------LFQEMPERNVVSWNTMIDGYAQSGRIDKALE 161
Query: 235 LFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRL 294
LF EM ++ VSW ++V A Q G+ +E + LFE M + D V++ ++ ++
Sbjct: 162 LFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM----PRRDVVSWTAMVDGLAKNGK 217
Query: 295 VEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRD 345
V++ ++F+ M E II ++ +I +++ R++EA M RD
Sbjct: 218 VDEARRLFDCMP-ERNII----SWNAMITGYAQNNRIDEADQLFQVMPERD 263
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 67/123 (54%), Gaps = 8/123 (6%)
Query: 225 KCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIG 284
K G I + +LF + +D V+WT +++ Y + G E LF+ + + + + VT+
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDS---RKNVVTWTA 114
Query: 285 VLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFR 344
++S R++ + +F+ M + + + ++ +ID ++++GR+++A + ++M R
Sbjct: 115 MVSGYLRSKQLSIAEMLFQEMPERNVV-----SWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 345 DSV 347
+ V
Sbjct: 170 NIV 172
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 164/320 (51%), Gaps = 33/320 (10%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
G+ + ++R + +M RD +SW S++ G QN +A++V REM S + D T
Sbjct: 186 GKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMA 245
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
S+L A + +N+ MY K +F +M K
Sbjct: 246 SLLPA-----------------VSNTTTENV--------MYVK--------DMFFKMGKK 272
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
++VSW M+ Y +N EAV+++ M+ G PD ++ SV+ +CG+ ++L G + H
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIH 332
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKAN 261
G LI + + NAL+ +Y KCG +E +F M +D VSWTA++SAY G+
Sbjct: 333 GYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGC 392
Query: 262 ETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCI 321
+ + LF + GL PD + F+ L+ CS L+E+G F+ MT + I P +H +C+
Sbjct: 393 DAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACM 452
Query: 322 IDLFSRAGRLEEARDFINQM 341
+DL RAG+++EA FI M
Sbjct: 453 VDLLGRAGKVKEAYRFIQDM 472
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 147/321 (45%), Gaps = 34/321 (10%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ +R++F ++ ER+ I MI NG + E + VF M + D YTF +L A
Sbjct: 90 VASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKA 149
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + G + H K G ++ G+ LV MY KC + A V EMS ++VVSW
Sbjct: 150 CSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSW 209
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
+++VGY QN ++A+++ +M+ + D T+ S++ + N
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN---------------- 253
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
T N + ++D +F +M K VSW ++ Y + E + L
Sbjct: 254 ------TTTENVMY--------VKD---MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVEL 296
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
+ M G +PD V+ VL C T + G +I + ++ +IP + +ID+++
Sbjct: 297 YSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK-LIPNLLLENALIDMYA 355
Query: 327 RAGRLEEARDFINQMLFRDSV 347
+ G LE+ARD M RD V
Sbjct: 356 KCGCLEKARDVFENMKSRDVV 376
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 151/313 (48%), Gaps = 39/313 (12%)
Query: 31 RQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGV 90
+ +F M ++ +SW MI +N + EA++++ M ++ E D + S+L ACG
Sbjct: 263 KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDT 322
Query: 91 MALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAML 150
AL G + H YI + N+ +AL+DMY KC ++ A VF+ M ++VVSWTAM+
Sbjct: 323 SALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMI 382
Query: 151 VGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIALVSGL 209
YG +G +AV +F +Q G+VPD + +++C + LEEG F + +
Sbjct: 383 SAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKI 442
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFGKANETIRLFE 268
+ +V L G+ G +++ +R +M+ + +E W AL+ A
Sbjct: 443 TPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA--------------- 487
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
+ T IG+L+ +++F+ ++ G +Y + +++++A
Sbjct: 488 ------CRVHSDTDIGLLA----------ADKLFQLAPEQSG------YYVLLSNIYAKA 525
Query: 329 GRLEEARDFINQM 341
GR EE + N M
Sbjct: 526 GRWEEVTNIRNIM 538
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 107/227 (47%), Gaps = 10/227 (4%)
Query: 73 LETDQ-------YTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKC 125
LE DQ + G +L + L+ HS II + N G L+ Y
Sbjct: 31 LELDQKSPQETVFLLGQVLDTYPDIRTLR---TVHSRIILEDLRCNSSLGVKLMRAYASL 87
Query: 126 RSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVI 185
+ V SA VF E+ +NV+ M+ Y NG+ E VK+F M V PD +T V+
Sbjct: 88 KDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVL 147
Query: 186 SSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEV 245
+C ++ G + HG A GL S + V N LVS+YGKCG + + + EM+ +D V
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV 207
Query: 246 SWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRT 292
SW +LV Y+Q + ++ + + M + + D T +L S T
Sbjct: 208 SWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E +R +F +M+ RD +SWT+MIS +G +A+ +F +++ L D F + L A
Sbjct: 360 LEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAA 419
Query: 87 CGGVMALQEGNQAHSYIIKT-GFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK-NVV 144
C L+EG + + + +VD+ + VK A ++MS + N
Sbjct: 420 CSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNER 479
Query: 145 SWTAML 150
W A+L
Sbjct: 480 VWGALL 485
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 179 FTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSE 238
F LG V+ + ++ +L H ++ L ++ L+ Y + ++F E
Sbjct: 43 FLLGQVLDTYPDIRTLR---TVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDE 99
Query: 239 MTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKG 298
+ ++ + ++ +Y G E +++F +M ++PD TF VL CS + + G
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG 159
Query: 299 NQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+I S TK G+ + ++ ++ + G L EAR +++M RD V
Sbjct: 160 RKIHGSATKV-GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV 207
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 171/333 (51%), Gaps = 3/333 (0%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM-RSEMLETDQYTFGSML 84
+ S +F M R+ SW +I +++G ++ID+F M R + D +T +L
Sbjct: 82 LFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLIL 141
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV 144
AC + G+ H +K GF +++ SALV MY + A +F +M ++ V
Sbjct: 142 RACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSV 201
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
+TAM GY Q G + + +F +M G D + S++ +CG L +L+ G HG
Sbjct: 202 LYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWC 261
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
+ + + NA+ +Y KC ++ H +F M+ +D +SW++L+ Y G +
Sbjct: 262 IRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSF 321
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
+LF+ ML G++P+ VTF+GVLS C+ LVEK F M +E+ I+P HY+ + D
Sbjct: 322 KLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM-QEYNIVPELKHYASVADC 380
Query: 325 FSRAGRLEEARDFINQMLFR-DSVLMQLVGQPC 356
SRAG LEEA F+ M + D +M V C
Sbjct: 381 MSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGC 413
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 143/283 (50%), Gaps = 18/283 (6%)
Query: 18 YLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQ 77
Y+ +G+LL +R+LF DM RDS+ +T+M G Q G + +FREM D
Sbjct: 179 YVDMGKLL---HARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDS 235
Query: 78 YTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE 137
S+L ACG + AL+ G H + I+ + G+A+ DMY KC + A TVF
Sbjct: 236 VVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVN 295
Query: 138 MSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG 197
MS ++V+SW+++++GYG +G + K+F +M K G+ P+ T V+S+C + +E+
Sbjct: 296 MSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKS 355
Query: 198 AQFHGIA----LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVS 252
+ + +V L + +V++ + + G +E+ + +M K DE A++S
Sbjct: 356 WLYFRLMQEYNIVPELKHYASVADCM----SRAGLLEEAEKFLEDMPVKPDEAVMGAVLS 411
Query: 253 AYSQFGKANETIRLFESMLTHGLKPDK----VTFIGVLSVCSR 291
+G R+ ++ LKP K VT G+ S R
Sbjct: 412 GCKVYGNVEVGERVARELIQ--LKPRKASYYVTLAGLYSAAGR 452
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 2/198 (1%)
Query: 106 TGFKDNIYAGSALVDMYCKCRSV-KSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVK 164
T N+ S LV Y K + ++ +VF M Y+N+ SW ++ + ++G++ +++
Sbjct: 60 TFLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSID 119
Query: 165 IFCDMQKYGVV-PDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLY 223
+F M + V PDDFTL ++ +C + G H + L G S + VS+ALV +Y
Sbjct: 120 LFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMY 179
Query: 224 GKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFI 283
G + +LF +M +D V +TA+ Y Q G+A + +F M G D V +
Sbjct: 180 VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMV 239
Query: 284 GVLSVCSRTRLVEKGNQI 301
+L C + ++ G +
Sbjct: 240 SLLMACGQLGALKHGKSV 257
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 173/327 (52%), Gaps = 10/327 (3%)
Query: 25 LMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSML 84
L + D+ +LF M ERD++SW SM+ G + G R+A R + EM + D ++ +ML
Sbjct: 168 LGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA----RRLFDEMPQRDLISWNTML 223
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY--KN 142
G +E ++A K + N + S +V Y K ++ A +F +M KN
Sbjct: 224 D---GYARCREMSKAFELFEKMPER-NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKN 279
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
VV+WT ++ GY + G +EA ++ M G+ D + S++++C L G + H
Sbjct: 280 VVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHS 339
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
I S L S V NAL+ +Y KCG+++ +F+++ KD VSW ++ G E
Sbjct: 340 ILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKE 399
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
I LF M G++PDKVTFI VL C+ L+++G F SM K + ++P +HY C++
Sbjct: 400 AIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLV 459
Query: 323 DLFSRAGRLEEARDFINQMLFRDSVLM 349
DL R GRL+EA + M +V++
Sbjct: 460 DLLGRVGRLKEAIKVVQTMPMEPNVVI 486
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 159/321 (49%), Gaps = 15/321 (4%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
++F ++E + S+I QN +A VF EM+ L D +T+ +L AC G
Sbjct: 72 RVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQS 131
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKC--RSVKSAETVFKEMSYKNVVSWTAM 149
L H++I K G +IY +AL+D Y +C V+ A +F++MS ++ VSW +M
Sbjct: 132 WLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSM 191
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
L G + G +A ++F +M + ++ + L + C ++ E L +
Sbjct: 192 LGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGY-ARCREMSKAFE--------LFEKM 242
Query: 210 ISFVTVS-NALVSLYGKCGSIEDCHRLFSEMTF--KDEVSWTALVSAYSQFGKANETIRL 266
TVS + +V Y K G +E +F +M K+ V+WT +++ Y++ G E RL
Sbjct: 243 PERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRL 302
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
+ M+ GLK D I +L+ C+ + L+ G +I S+ K + + ++D+++
Sbjct: 303 VDQMVASGLKFDAAAVISILAACTESGLLSLGMRI-HSILKRSNLGSNAYVLNALLDMYA 361
Query: 327 RAGRLEEARDFINQMLFRDSV 347
+ G L++A D N + +D V
Sbjct: 362 KCGNLKKAFDVFNDIPKKDLV 382
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 124/251 (49%), Gaps = 11/251 (4%)
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
L + Q H+ II+ ++++ L+ CR A VF ++ NV +++
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRA 91
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISF 212
+ QN +A +F +MQ++G+ D+FT ++ +C + L H GL S
Sbjct: 92 HAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSD 151
Query: 213 VTVSNALVSLYGKCG--SIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESM 270
+ V NAL+ Y +CG + D +LF +M+ +D VSW +++ + G+ + RLF+ M
Sbjct: 152 IYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM 211
Query: 271 LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGR 330
D +++ +L +R R + K ++FE M + + + +S ++ +S+AG
Sbjct: 212 PQR----DLISWNTMLDGYARCREMSKAFELFEKMPERNTV-----SWSTMVMGYSKAGD 262
Query: 331 LEEARDFINQM 341
+E AR ++M
Sbjct: 263 MEMARVMFDKM 273
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 169/323 (52%), Gaps = 1/323 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E SR +F M + +SWT++I G +G ++ + EM +E + T +L A
Sbjct: 378 VEASR-VFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRA 436
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + ++ + H+Y+++ + G++LVD Y R V A V + M ++ +++
Sbjct: 437 CSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITY 496
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
T+++ + + G E A+ + M G+ D +L IS+ NL +LE G H ++
Sbjct: 497 TSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVK 556
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
SG +V N+LV +Y KCGS+ED ++F E+ D VSW LVS + G + +
Sbjct: 557 SGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSA 616
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
FE M +PD VTF+ +LS CS RL + G + F+ M K + I P +HY ++ +
Sbjct: 617 FEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILG 676
Query: 327 RAGRLEEARDFINQMLFRDSVLM 349
RAGRLEEA + M + + ++
Sbjct: 677 RAGRLEEATGVVETMHLKPNAMI 699
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 165/313 (52%), Gaps = 4/313 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I ++R+LF +M R +WT MIS T++ A+ +F EM + +++TF S++ +
Sbjct: 74 IWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRS 133
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C G+ + G + H +IKTGF+ N GS+L D+Y KC K A +F + + +SW
Sbjct: 134 CAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISW 193
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
T M+ EA++ + +M K GV P++FT ++ + L LE G H +V
Sbjct: 194 TMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIV 252
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
G+ V + +LV Y + +ED R+ + +D WT++VS + + +A E +
Sbjct: 253 RGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGT 312
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
F M + GL+P+ T+ +LS+CS R ++ G QI S T + G D + ++D++
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQI-HSQTIKVGFEDSTDVGNALVDMYM 371
Query: 327 R--AGRLEEARDF 337
+ A +E +R F
Sbjct: 372 KCSASEVEASRVF 384
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 135/267 (50%), Gaps = 10/267 (3%)
Query: 80 FGSMLTACGGVMALQEGNQA------HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAET 133
G++ +C +++ E N + H +IK G +N+ + L+ +Y K + +A
Sbjct: 20 LGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARK 79
Query: 134 VFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLAS 193
+F EMS++ V +WT M+ + ++ A+ +F +M G P++FT SV+ SC L
Sbjct: 80 LFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRD 139
Query: 194 LEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSA 253
+ G + HG + +G V ++L LY KCG ++ LFS + D +SWT ++S+
Sbjct: 140 ISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISS 199
Query: 254 YSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIP 313
K E ++ + M+ G+ P++ TF+ +L S L E G I ++ IP
Sbjct: 200 LVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRG--IP 256
Query: 314 IQDHY-SCIIDLFSRAGRLEEARDFIN 339
+ + ++D +S+ ++E+A +N
Sbjct: 257 LNVVLKTSLVDFYSQFSKMEDAVRVLN 283
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 180/366 (49%), Gaps = 36/366 (9%)
Query: 20 VLGRLLMIED---SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETD 76
+L RLL+I + +R+LF + + + +I + E+I ++ + + L
Sbjct: 22 LLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPS 81
Query: 77 QYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK 136
+TF + A + + HS ++GF+ + + + L+ Y K ++ A VF
Sbjct: 82 HHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFD 141
Query: 137 EMS-------------------------------YKNVVSWTAMLVGYGQNGYSEEAVKI 165
EMS KNV SWT ++ G+ QNG EA+K+
Sbjct: 142 EMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKM 201
Query: 166 FCDMQK-YGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYG 224
F M+K V P+ T+ SV+ +C NL LE G + G A +G + V NA + +Y
Sbjct: 202 FLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYS 261
Query: 225 KCGSIEDCHRLFSEM-TFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFI 283
KCG I+ RLF E+ ++ SW +++ + + GK +E + LF ML G KPD VTF+
Sbjct: 262 KCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFV 321
Query: 284 GVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLF 343
G+L C +V KG ++F+SM + H I P +HY C+IDL R G+L+EA D I M
Sbjct: 322 GLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPM 381
Query: 344 RDSVLM 349
+ ++
Sbjct: 382 KPDAVV 387
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 123/231 (53%), Gaps = 4/231 (1%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM-RSEMLETDQYTFGSMLTACGGV 90
+LF M ++ SWT++ISG +QNG + EA+ +F M + + ++ + T S+L AC +
Sbjct: 169 ELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANL 228
Query: 91 MALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM-SYKNVVSWTAM 149
L+ G + Y + GF DNIY +A ++MY KC + A+ +F+E+ + +N+ SW +M
Sbjct: 229 GELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSM 288
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIALVSG 208
+ +G +EA+ +F M + G PD T ++ +C + + +G + F + V
Sbjct: 289 IGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHK 348
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFG 258
+ + ++ L G+ G +++ + L M K D V W L+ A S G
Sbjct: 349 ISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/278 (18%), Positives = 108/278 (38%), Gaps = 41/278 (14%)
Query: 98 QAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNG 157
Q H++ ++TG + L+ ++ A +F + ++ Y +
Sbjct: 6 QLHAHCLRTGVDET----KDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHH 61
Query: 158 YSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSN 217
E++ ++ + G+ P T + ++ + +S H SG S
Sbjct: 62 QPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCT 121
Query: 218 ALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG--- 274
L++ Y K G++ R+F EM+ +D W A+++ Y + G + LF+SM
Sbjct: 122 TLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTS 181
Query: 275 -----------------------------LKPDKVTFIGVLSVCSRTRLVEKGNQIFESM 305
+KP+ +T + VL C+ +E G ++ E
Sbjct: 182 WTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRL-EGY 240
Query: 306 TKEHGIIPIQDHYSC--IIDLFSRAGRLEEARDFINQM 341
+E+G + Y C I+++S+ G ++ A+ ++
Sbjct: 241 ARENGF--FDNIYVCNATIEMYSKCGMIDVAKRLFEEL 276
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 169/320 (52%), Gaps = 3/320 (0%)
Query: 30 SRQLFCDMRERDSIS---WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+R++F D+ + ++ W +M G ++NG R+A+ V+ +M +E ++ L A
Sbjct: 186 ARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKA 245
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + L+ G H+ I+K K + + L+ +Y + A VF MS +NVV+W
Sbjct: 246 CVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTW 305
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
+++ + E +F MQ+ + TL +++ +C +A+L G + H L
Sbjct: 306 NSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILK 365
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
S V + N+L+ +YGKCG +E R+F M KD SW +++ Y+ G E I L
Sbjct: 366 SKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINL 425
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
FE M+ G+ PD +TF+ +LS CS T L E G +FE M E + P +HY+C++D+
Sbjct: 426 FEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILG 485
Query: 327 RAGRLEEARDFINQMLFRDS 346
RAG+++EA I M F+ S
Sbjct: 486 RAGKIKEAVKVIETMPFKPS 505
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 18 YLVLGRLLM----IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEML 73
Y VL +L M +D+R++F M ER+ ++W S+IS ++ E ++FR+M+ EM+
Sbjct: 274 YNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMI 333
Query: 74 ETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAET 133
T ++L AC V AL G + H+ I+K+ K ++ ++L+DMY KC V+ +
Sbjct: 334 GFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRR 393
Query: 134 VFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLAS 193
VF M K++ SW ML Y NG EE + +F M + GV PD T +++S C
Sbjct: 394 VFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCS---- 449
Query: 194 LEEGAQFHGIALVSGLISFVTVSNA------LVSLYGKCGSIEDCHRLFSEMTFKDEVS- 246
+ G +G++L + + VS A LV + G+ G I++ ++ M FK S
Sbjct: 450 -DTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASI 508
Query: 247 WTALVSA 253
W +L+++
Sbjct: 509 WGSLLNS 515
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 173/321 (53%), Gaps = 14/321 (4%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSML-- 84
++++R +F +MRER+ ++WT+MI+G QN +DV R++ M E + ++ SML
Sbjct: 188 VDEARLIFDEMRERNVVTWTTMITGYRQNN----RVDVARKLFEVMPEKTEVSWTSMLLG 243
Query: 85 -TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV 143
T G + +E + + A +A++ + + + A VF M ++
Sbjct: 244 YTLSGRIEDAEE-------FFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDN 296
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGI 203
+W M+ Y + G+ EA+ +F MQK GV P +L S++S C LASL+ G Q H
Sbjct: 297 ATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAH 356
Query: 204 ALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANET 263
+ V V++ L+++Y KCG + +F + KD + W +++S Y+ G E
Sbjct: 357 LVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEA 416
Query: 264 IRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIID 323
+++F M + G P+KVT I +L+ CS +E+G +IFESM + + P +HYSC +D
Sbjct: 417 LKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVD 476
Query: 324 LFSRAGRLEEARDFINQMLFR 344
+ RAG++++A + I M +
Sbjct: 477 MLGRAGQVDKAMELIESMTIK 497
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 126/235 (53%), Gaps = 2/235 (0%)
Query: 21 LGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTF 80
G + I +R++F M +RD+ +W MI + G EA+D+F +M+ + + +
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 81 GSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY 140
S+L+ C + +LQ G Q H+++++ F D++Y S L+ MY KC + A+ VF S
Sbjct: 335 ISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSS 394
Query: 141 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ- 199
K+++ W +++ GY +G EEA+KIF +M G +P+ TL +++++C LEEG +
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEI 454
Query: 200 FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSA 253
F + + V + V + G+ G ++ L MT K D W AL+ A
Sbjct: 455 FESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGA 509
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 138/283 (48%), Gaps = 18/283 (6%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
MI ++R +F M ER+ +SWT+M+ G Q G+ EA +F M E ++ ++ M
Sbjct: 94 MIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLF----WRMPERNEVSWTVMF- 148
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
GG++ ++A KD + A + ++ C+ V A +F EM +NVV+
Sbjct: 149 --GGLIDDGRIDKARKLYDMMPVKD-VVASTNMIGGLCREGRVDEARLIFDEMRERNVVT 205
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDM-QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
WT M+ GY QN + A K+F M +K V LG +S +E+ +F +
Sbjct: 206 WTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLS-----GRIEDAEEFFEVM 260
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
+ +I+ NA++ +G+ G I R+F M +D +W ++ AY + G E +
Sbjct: 261 PMKPVIA----CNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEAL 316
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK 307
LF M G++P + I +LSVC+ ++ G Q+ + +
Sbjct: 317 DLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR 359
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 143/330 (43%), Gaps = 64/330 (19%)
Query: 21 LGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTF 80
L R+ I ++R+ F ++ + SW S++SG NGL +EA +F EM
Sbjct: 27 LSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER--------- 77
Query: 81 GSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY 140
N+ + + LV Y K R + A VF+ M
Sbjct: 78 ------------------------------NVVSWNGLVSGYIKNRMIVEARNVFELMPE 107
Query: 141 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
+NVVSWTAM+ GY Q G EA +F M + V G +I +++ +
Sbjct: 108 RNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDD----GRIDKARKL 163
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKA 260
+ + V +++ S ++ + G +++ +F EM ++ V+WT +++ Y Q +
Sbjct: 164 YDMMPVKDVVA----STNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRV 219
Query: 261 NETIRLFESMLTHGLKPDK--VTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY 318
+ +LFE M P+K V++ +L + + +E + FE ++P++
Sbjct: 220 DVARKLFEVM------PEKTEVSWTSMLLGYTLSGRIEDAEEFFE-------VMPMKPVI 266
Query: 319 SC--IIDLFSRAGRLEEARDFINQMLFRDS 346
+C +I F G + +AR + M RD+
Sbjct: 267 ACNAMIVGFGEVGEISKARRVFDLMEDRDN 296
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 181 bits (458), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 188/346 (54%), Gaps = 9/346 (2%)
Query: 4 LEVLWWICIRKWDSYLVLGRLLMIEDSR--------QLFCDMRERDSISWTSMISGCTQN 55
+E+ ++ WDS L +G L+ S+ + F M ++D ISWT++I+G QN
Sbjct: 406 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465
Query: 56 GLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAG 115
H EA+++FR++ + +E D+ GS+L A + ++ + H +I++ G D +
Sbjct: 466 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQN 525
Query: 116 SALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV 175
LVD+Y KCR++ A VF+ + K+VVSWT+M+ NG EAV++F M + G+
Sbjct: 526 E-LVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 584
Query: 176 PDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRL 235
D L ++S+ +L++L +G + H L G +++ A+V +Y CG ++ +
Sbjct: 585 ADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAV 644
Query: 236 FSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLV 295
F + K + +T++++AY G + LF+ M + PD ++F+ +L CS L+
Sbjct: 645 FDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLL 704
Query: 296 EKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
++G + M E+ + P +HY C++D+ RA + EA +F+ M
Sbjct: 705 DEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMM 750
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 171/319 (53%), Gaps = 10/319 (3%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ + ++ M D ++W S+I G QN +++EA++ F +M + ++D+ + S++ A
Sbjct: 336 MPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
G + L G + H+Y+IK G+ N+ G+ L+DMY KC F M K+++SW
Sbjct: 396 SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISW 455
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
T ++ GY QN EA+++F D+ K + D+ LGS++ + L S+ + H L
Sbjct: 456 TTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 515
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
GL+ V + N LV +YGKC ++ R+F + KD VSWT+++S+ + G +E + L
Sbjct: 516 KGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVEL 574
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKE----HGIIPIQDHYSCII 322
F M+ GL D V + +LS + + KG +I + ++ G I + ++
Sbjct: 575 FRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV-----AVV 629
Query: 323 DLFSRAGRLEEARDFINQM 341
D+++ G L+ A+ +++
Sbjct: 630 DMYACCGDLQSAKAVFDRI 648
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 156/308 (50%), Gaps = 3/308 (0%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
G+ ++D+ ++F +M +R + +W +MI NG A+ ++ MR E + +F
Sbjct: 127 GKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFP 186
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
++L AC + ++ G++ HS ++K G+ + +ALV MY K + +A +F K
Sbjct: 187 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 246
Query: 142 -NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
+ V W ++L Y +G S E +++F +M G P+ +T+ S +++C + + G +
Sbjct: 247 GDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEI 306
Query: 201 HGIALVSGLISF-VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
H L S S + V NAL+++Y +CG + R+ +M D V+W +L+ Y Q
Sbjct: 307 HASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLM 366
Query: 260 ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYS 319
E + F M+ G K D+V+ +++ R + G ++ + K HG +
Sbjct: 367 YKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK-HGWDSNLQVGN 425
Query: 320 CIIDLFSR 327
+ID++S+
Sbjct: 426 TLIDMYSK 433
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 141/263 (53%), Gaps = 2/263 (0%)
Query: 30 SRQLFCDMRER-DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACG 88
+R+LF +E+ D++ W S++S + +G E +++FREM + YT S LTAC
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295
Query: 89 GVMALQEGNQAHSYIIKTG-FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
G + G + H+ ++K+ +Y +AL+ MY +C + AE + ++M+ +VV+W
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
+++ GY QN +EA++ F DM G D+ ++ S+I++ G L++L G + H +
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH 415
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
G S + V N L+ +Y KC R F M KD +SWT +++ Y+Q E + LF
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475
Query: 268 ESMLTHGLKPDKVTFIGVLSVCS 290
+ ++ D++ +L S
Sbjct: 476 RDVAKKRMEIDEMILGSILRASS 498
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 134/274 (48%), Gaps = 8/274 (2%)
Query: 79 TFGSMLTACGGVMALQEGNQAHSYIIKT--GFKDNIYAGSALVDMYCKCRSVKSAETVFK 136
F +L CG A+ +G Q HS I KT F+ + AG LV MY KC S+ AE VF
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK-LVFMYGKCGSLDDAEKVFD 140
Query: 137 EMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE 196
EM + +W M+ Y NG A+ ++ +M+ GV + +++ +C L +
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 197 GAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYS 255
G++ H + + G S + NALVS+Y K + RLF K D V W +++S+YS
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 256 QFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ 315
GK+ ET+ LF M G P+ T + L+ C + G +I S+ K
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS--THSS 318
Query: 316 DHYSC--IIDLFSRAGRLEEARDFINQMLFRDSV 347
+ Y C +I +++R G++ +A + QM D V
Sbjct: 319 ELYVCNALIAMYTRCGKMPQAERILRQMNNADVV 352
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 181 bits (458), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 174/322 (54%), Gaps = 1/322 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E + LF +R R+ SW ++I + GL A+ F EM + D + ++ A
Sbjct: 123 LEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKA 182
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
CG + + G H Y++K+G +D ++ S+L DMY KC + A VF E+ +N V+W
Sbjct: 183 CGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAW 242
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
A++VGY QNG +EEA+++F DM+K GV P T+ + +S+ N+ +EEG Q H IA+V
Sbjct: 243 NALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIV 302
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
+G+ + +L++ Y K G IE +F M KD V+W ++S Y Q G + I +
Sbjct: 303 NGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYM 362
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
+ M LK D VT ++S +RT ++ G ++ + H S ++D+++
Sbjct: 363 CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV-QCYCIRHSFESDIVLASTVMDMYA 421
Query: 327 RAGRLEEARDFINQMLFRDSVL 348
+ G + +A+ + + +D +L
Sbjct: 422 KCGSIVDAKKVFDSTVEKDLIL 443
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 181/321 (56%), Gaps = 3/321 (0%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
G+ +++D+ ++F ++ +R++++W +++ G QNG + EAI +F +MR + +E + T
Sbjct: 219 GKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVS 278
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFK-DNIYAGSALVDMYCKCRSVKSAETVFKEMSY 140
+ L+A + ++EG Q+H+ I G + DNI G++L++ YCK ++ AE VF M
Sbjct: 279 TCLSASANMGGVEEGKQSHAIAIVNGMELDNIL-GTSLLNFYCKVGLIEYAEMVFDRMFE 337
Query: 141 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
K+VV+W ++ GY Q G E+A+ + M+ + D TL +++S+ +L+ G +
Sbjct: 338 KDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV 397
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKA 260
+ S + +++ ++ +Y KCGSI D ++F KD + W L++AY++ G +
Sbjct: 398 QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLS 457
Query: 261 NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC 320
E +RLF M G+ P+ +T+ ++ R V++ +F M + GIIP ++
Sbjct: 458 GEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNLISWTT 516
Query: 321 IIDLFSRAGRLEEARDFINQM 341
+++ + G EEA F+ +M
Sbjct: 517 MMNGMVQNGCSEEAILFLRKM 537
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 174/362 (48%), Gaps = 52/362 (14%)
Query: 11 CIR-KWDSYLVLGRLLM--------IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREA 61
CIR ++S +VL +M I D++++F E+D I W ++++ ++GL EA
Sbjct: 401 CIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEA 460
Query: 62 IDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDM 121
+ +F M+ E G N+ + ++
Sbjct: 461 LRLFYGMQLE-----------------------------------GVPPNVITWNLIILS 485
Query: 122 YCKCRSVKSAETVFKEMS----YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPD 177
+ V A+ +F +M N++SWT M+ G QNG SEEA+ MQ+ G+ P+
Sbjct: 486 LLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPN 545
Query: 178 DFTLGSVISSCGNLASLEEGAQFHGIALVSGL--ISFVTVSNALVSLYGKCGSIEDCHRL 235
F++ +S+C +LASL G HG ++ L S V++ +LV +Y KCG I ++
Sbjct: 546 AFSITVALSACAHLASLHIGRTIHGY-IIRNLQHSSLVSIETSLVDMYAKCGDINKAEKV 604
Query: 236 FSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLV 295
F + + A++SAY+ +G E I L+ S+ GLKPD +T VLS C+ +
Sbjct: 605 FGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDI 664
Query: 296 EKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFR-DSVLMQLVGQ 354
+ +IF + + + P +HY ++DL + AG E+A I +M F+ D+ ++Q +
Sbjct: 665 NQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVA 724
Query: 355 PC 356
C
Sbjct: 725 SC 726
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 160/319 (50%), Gaps = 15/319 (4%)
Query: 42 SISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHS 101
S S+ +S +NG +EA+ + EM L +G +L C L G Q H+
Sbjct: 35 STSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHA 94
Query: 102 YIIKTG--FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYS 159
I+K G + N Y + LV Y KC +++ AE +F ++ +NV SW A++ + G
Sbjct: 95 RILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLC 154
Query: 160 EEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNAL 219
E A+ F +M + + PD+F + +V +CG L G HG + SGL V V+++L
Sbjct: 155 EGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSL 214
Query: 220 VSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDK 279
+YGKCG ++D ++F E+ ++ V+W AL+ Y Q GK E IRLF M G++P +
Sbjct: 215 ADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTR 274
Query: 280 VTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ----DHY--SCIIDLFSRAGRLEE 333
VT LS + VE+G Q H I + D+ + +++ + + G +E
Sbjct: 275 VTVSTCLSASANMGGVEEGKQ-------SHAIAIVNGMELDNILGTSLLNFYCKVGLIEY 327
Query: 334 ARDFINQMLFRDSVLMQLV 352
A ++M +D V L+
Sbjct: 328 AEMVFDRMFEKDVVTWNLI 346
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 170/310 (54%), Gaps = 3/310 (0%)
Query: 32 QLFCDMRERDSIS--WTSMISGCTQNGLHREAIDVF-REMRSEMLETDQYTFGSMLTACG 88
QL D + D + W +I G + + +I + R + S + D +TF L +C
Sbjct: 59 QLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCE 118
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
+ ++ + + H +I++GF D+ ++LV Y SV+ A VF EM +++VSW
Sbjct: 119 RIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNV 178
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
M+ + G +A+ ++ M GV D +TL +++SSC ++++L G H IA
Sbjct: 179 MICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIR 238
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
S V VSNAL+ +Y KCGS+E+ +F+ M +D ++W +++ Y G E I F
Sbjct: 239 CESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFR 298
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
M+ G++P+ +TF+G+L CS LV++G + FE M+ + + P HY C++DL+ RA
Sbjct: 299 KMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRA 358
Query: 329 GRLEEARDFI 338
G+LE + + I
Sbjct: 359 GQLENSLEMI 368
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 123/236 (52%), Gaps = 16/236 (6%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E + ++F +M RD +SW MI + GLH +A+ +++ M +E + D YT ++L++
Sbjct: 158 VEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSS 217
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C V AL G H + ++ +AL+DMY KC S+++A VF M ++V++W
Sbjct: 218 CAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTW 277
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG--------A 198
+M++GYG +G+ EA+ F M GV P+ T ++ C + ++EG +
Sbjct: 278 NSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSS 337
Query: 199 QFHGIALVSGLISFVTVSNALVSLYGKCGSIEDC-HRLFSEMTFKDEVSWTALVSA 253
QFH L V +V LYG+ G +E+ +++ +D V W L+ +
Sbjct: 338 QFH-------LTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGS 386
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 191/387 (49%), Gaps = 66/387 (17%)
Query: 18 YLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEM-LETD 76
Y +GR++ D+R LF M ER+ I+WT+MI G + G + +F MR E ++ +
Sbjct: 218 YCKMGRIV---DARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVN 274
Query: 77 QYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAG--------------------- 115
T M AC + +EG+Q H + + + +++ G
Sbjct: 275 SNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFG 334
Query: 116 ----------SALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYG----------- 154
++L+ + + + A +F++M K++VSWT M+ G+
Sbjct: 335 VMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVEL 394
Query: 155 --------------------QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASL 194
NGY EEA+ F M + V P+ +T SV+S+ +LA L
Sbjct: 395 FGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADL 454
Query: 195 EEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAY 254
EG Q HG + +++ ++V N+LVS+Y KCG+ D +++FS ++ + VS+ ++S Y
Sbjct: 455 IEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGY 514
Query: 255 SQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPI 314
S G + ++LF + + G +P+ VTF+ +LS C V+ G + F+SM + I P
Sbjct: 515 SYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPG 574
Query: 315 QDHYSCIIDLFSRAGRLEEARDFINQM 341
DHY+C++DL R+G L++A + I+ M
Sbjct: 575 PDHYACMVDLLGRSGLLDDASNLISTM 601
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 136/258 (52%), Gaps = 4/258 (1%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
+LF M E+D+I+WT+MIS NG + EA+ F +M + + + YTF S+L+A +
Sbjct: 393 ELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLA 452
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLV 151
L EG Q H ++K +++ ++LV MYCKC + A +F +S N+VS+ M+
Sbjct: 453 DLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMIS 512
Query: 152 GYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLIS 211
GY NG+ ++A+K+F ++ G P+ T +++S+C ++ ++ G ++ S I
Sbjct: 513 GYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIE 572
Query: 212 FVTVSNA-LVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSAYSQFGKANETIRLFES 269
A +V L G+ G ++D L S M K W +L+SA + + +
Sbjct: 573 PGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKK 632
Query: 270 MLTHGLKPDKVTFIGVLS 287
++ L+PD T VLS
Sbjct: 633 LIE--LEPDSATPYVVLS 648
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 161/317 (50%), Gaps = 20/317 (6%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
+LFCD+ E++++S+ +MI+G + G EA ++ E + D +L+ G +
Sbjct: 134 ELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKF--RDSVASNVLLS---GYL 188
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLV 151
+ N+A K+ + + S++V YCK + A ++F M+ +NV++WTAM+
Sbjct: 189 RAGKWNEAVRVFQGMAVKE-VVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMID 247
Query: 152 GYGQNGYSEEAVKIFCDMQKYGVVP-DDFTLGSVISSCGNLASLEEGAQFHGIALVSGLI 210
GY + G+ E+ +F M++ G V + TL + +C + EG+Q HG+ L
Sbjct: 248 GYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLE 307
Query: 211 SFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESM 270
+ + N+L+S+Y K G + + +F M KD VSW +L++ Q + +E LFE M
Sbjct: 308 FDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Query: 271 LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH--YSCIIDLFSRA 328
D V++ ++ S + K ++F G++P +D+ ++ +I F
Sbjct: 368 PGK----DMVSWTDMIKGFSGKGEISKCVELF-------GMMPEKDNITWTAMISAFVSN 416
Query: 329 GRLEEARDFINQMLFRD 345
G EEA + ++ML ++
Sbjct: 417 GYYEEALCWFHKMLQKE 433
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 114/239 (47%), Gaps = 18/239 (7%)
Query: 98 QAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNG 157
+ +++ T I+ ++ + + + +++ AE +F++MS +++VSW AM+ Y +NG
Sbjct: 36 KTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENG 95
Query: 158 YSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSN 217
+A ++F +M + + ++I N L + + +S+ T+
Sbjct: 96 KMSKAWQVFDEMPVRVTTSYNAMITAMIK---NKCDLGKAYELFCDIPEKNAVSYATMIT 152
Query: 218 ALVSLYGKCGSIEDCHRLFSE--MTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGL 275
V + G ++ L++E + F+D V+ L+S Y + GK NE +R+F+ M +
Sbjct: 153 GFV----RAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGM---AV 205
Query: 276 KPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
K V C R+V+ +F+ MT+ + I ++ +ID + +AG E+
Sbjct: 206 KEVVSCSSMVHGYCKMGRIVD-ARSLFDRMTERNVIT-----WTAMIDGYFKAGFFEDG 258
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 191/406 (47%), Gaps = 72/406 (17%)
Query: 16 DSY----LVLGRLLMIEDS----RQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFRE 67
DSY L+L + I D+ R+L E D+ + +++ G +++ ++ VF E
Sbjct: 36 DSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVE 95
Query: 68 M-RSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCR 126
M R + D ++F ++ A +L+ G Q H +K G + +++ G+ L+ MY C
Sbjct: 96 MMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCG 155
Query: 127 SVKSAETVFKEMSYKNVVSWTA-------------------------------MLVGYGQ 155
V+ A VF EM N+V+W A ML GY +
Sbjct: 156 CVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIK 215
Query: 156 NGYSEEAVKIFCDM-------------------------------QKYGVVPDDFTLGSV 184
G E A +IF +M Q+ G+ P++ +L V
Sbjct: 216 AGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGV 275
Query: 185 ISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKD- 243
+S+C S E G HG +G V+V+NAL+ +Y +CG++ +F M K
Sbjct: 276 LSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRC 335
Query: 244 EVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFE 303
VSWT++++ + G+ E +RLF M +G+ PD ++FI +L CS L+E+G F
Sbjct: 336 IVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFS 395
Query: 304 SMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLM 349
M + + I P +HY C++DL+ R+G+L++A DFI QM + ++
Sbjct: 396 EMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIV 441
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 124/236 (52%), Gaps = 3/236 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E ++++F +M RD +SW++MI G NG E+ FRE++ + ++ + +L+A
Sbjct: 219 LESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSA 278
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN-VVS 145
C + + G H ++ K G+ + +AL+DMY +C +V A VF+ M K +VS
Sbjct: 279 CSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVS 338
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIA 204
WT+M+ G +G EEAV++F +M YGV PD + S++ +C + +EEG F +
Sbjct: 339 WTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMK 398
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKD-EVSWTALVSAYSQFGK 259
V + + +V LYG+ G ++ + +M + W L+ A S G
Sbjct: 399 RVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGN 454
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 129/320 (40%), Gaps = 71/320 (22%)
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCR---SVKSAETVFKEM 138
S+L +C + AL Q H IK G + Y L+ ++C ++ A +
Sbjct: 10 SLLNSCKNLRAL---TQIHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRLLLCF 65
Query: 139 SYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV-PDDFTLGSVISSCGNLASLEEG 197
+ + ++ GY ++ +V +F +M + G V PD F+ VI + N SL G
Sbjct: 66 PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 198 AQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSA---- 253
Q H AL GL S + V L+ +YG CG +E ++F EM + V+W A+++A
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 254 ---------------------------YSQFGKANETIRLFESM--------------LT 272
Y + G+ R+F M +
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 245
Query: 273 H-----------------GLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ 315
H G+ P++V+ GVLS CS++ E G +I ++ G I
Sbjct: 246 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG-KILHGFVEKAGYSWIV 304
Query: 316 DHYSCIIDLFSRAGRLEEAR 335
+ +ID++SR G + AR
Sbjct: 305 SVNNALIDMYSRCGNVPMAR 324
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 173/346 (50%), Gaps = 31/346 (8%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E++R++F + RD +SW +I+G + G +AI V++ M SE ++ D T ++++
Sbjct: 207 MENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSS 266
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + L G + + Y+ + G + I +AL+DM+ KC + A +F + + +VSW
Sbjct: 267 CSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSW 326
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVV------------------------------- 175
T M+ GY + G + + K+F DM++ VV
Sbjct: 327 TTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTK 386
Query: 176 PDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRL 235
PD+ T+ +S+C L +L+ G H L V + +LV +Y KCG+I + +
Sbjct: 387 PDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSV 446
Query: 236 FSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLV 295
F + ++ +++TA++ + G A+ I F M+ G+ PD++TFIG+LS C ++
Sbjct: 447 FHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMI 506
Query: 296 EKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+ G F M + P HYS ++DL RAG LEEA + M
Sbjct: 507 QTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 163/338 (48%), Gaps = 35/338 (10%)
Query: 44 SWTSMISGCTQNGLHREAIDVFREM-RSEMLET--DQYTFGSMLTACGGVMALQEGNQAH 100
SW I G +++ +E+ ++++M R E+ D +T+ + C + G+
Sbjct: 120 SWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMIL 179
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSE 160
+++K + + +A + M+ C +++A VF E +++VSW ++ GY + G +E
Sbjct: 180 GHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAE 239
Query: 161 EAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALV 220
+A+ ++ M+ GV PDD T+ ++SSC L L G +F+ +GL + + NAL+
Sbjct: 240 KAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALM 299
Query: 221 SLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFG---------------------- 258
++ KCG I + R+F + + VSWT ++S Y++ G
Sbjct: 300 DMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNA 359
Query: 259 ---------KANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEH 309
+ + + LF+ M T KPD++T I LS CS+ ++ G I + K
Sbjct: 360 MIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYS 419
Query: 310 GIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ + S ++D++++ G + EA + + R+S+
Sbjct: 420 LSLNVALGTS-LVDMYAKCGNISEALSVFHGIQTRNSL 456
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 123/232 (53%), Gaps = 2/232 (0%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
R +++ SR+LF DM E+D + W +MI G Q ++A+ +F+EM++ + D+ T
Sbjct: 334 ARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMI 393
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
L+AC + AL G H YI K N+ G++LVDMY KC ++ A +VF + +
Sbjct: 394 HCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR 453
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-F 200
N +++TA++ G +G + A+ F +M G+ PD+ T ++S+C + ++ G F
Sbjct: 454 NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYF 513
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALV 251
+ L + + +V L G+ G +E+ RL M + D W AL+
Sbjct: 514 SQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALL 565
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 138/275 (50%), Gaps = 17/275 (6%)
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYC---KCRSVKSAETVFKEM 138
S+L C ++ L+ Q + +I G + +A S L+ +C + R + + + K +
Sbjct: 58 SLLEKCKLLLHLK---QIQAQMIINGLILDPFASSRLI-AFCALSESRYLDYSVKILKGI 113
Query: 139 SYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV---PDDFTLGSVISSCGNLASLE 195
N+ SW + G+ ++ +E+ ++ M ++G PD FT + C +L
Sbjct: 114 ENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS 173
Query: 196 EGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYS 255
G G L L V NA + ++ CG +E+ ++F E +D VSW L++ Y
Sbjct: 174 LGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYK 233
Query: 256 QFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGI---I 312
+ G+A + I +++ M + G+KPD VT IG++S CS + +G + +E KE+G+ I
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYE-YVKENGLRMTI 292
Query: 313 PIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
P+ + ++D+FS+ G + EAR + + R V
Sbjct: 293 PL---VNALMDMFSKCGDIHEARRIFDNLEKRTIV 324
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 174/326 (53%), Gaps = 11/326 (3%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
+I + ++FC+M E++ + WTSMI+G L+++ + R E D + +M++
Sbjct: 43 VIASANKVFCEMVEKNVVLWTSMINGYL---LNKDLVSA-RRYFDLSPERDIVLWNTMIS 98
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
G + + +A S + +D + + + +++ Y +++ E VF +M +NV S
Sbjct: 99 ---GYIEMGNMLEARSLFDQMPCRD-VMSWNTVLEGYANIGDMEACERVFDDMPERNVFS 154
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYG-VVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
W ++ GY QNG E + F M G VVP+D T+ V+S+C L + + G H
Sbjct: 155 WNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYG 214
Query: 205 LVSGLISF-VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANET 263
G V V NAL+ +YGKCG+IE +F + +D +SW +++ + G E
Sbjct: 215 ETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEA 274
Query: 264 IRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIID 323
+ LF M G+ PDKVTF+GVL C LVE G F SM + I+P +H C++D
Sbjct: 275 LNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVD 334
Query: 324 LFSRAGRLEEARDFINQMLFR-DSVL 348
L SRAG L +A +FIN+M + D+V+
Sbjct: 335 LLSRAGFLTQAVEFINKMPVKADAVI 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 19/236 (8%)
Query: 118 LVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPD 177
L M C + SA VF EM KNVV WT+M+ GY N A + F + P+
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF------DLSPE 87
Query: 178 -DFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS-NALVSLYGKCGSIEDCHRL 235
D L + + S +E G +L + +S N ++ Y G +E C R+
Sbjct: 88 RDIVLWNTMIS----GYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERV 143
Query: 236 FSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG-LKPDKVTFIGVLSVCSRTRL 294
F +M ++ SW L+ Y+Q G+ +E + F+ M+ G + P+ T VLS C++
Sbjct: 144 FDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGA 203
Query: 295 VEKGNQIF---ESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ G + E++ + +++ +ID++ + G +E A + + RD +
Sbjct: 204 FDFGKWVHKYGETLGYNKVDVNVKN---ALIDMYGKCGAIEIAMEVFKGIKRRDLI 256
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
G+ IE + ++F ++ RD ISW +MI+G +G EA+++F EM++ + D+ TF
Sbjct: 235 GKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFV 294
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFK--DNIYAGSALVDMYCKCRSVKSAETVFKEMS 139
+L AC M L E A+ + T F I +VD+ + + A +M
Sbjct: 295 GVLCACKH-MGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMP 353
Query: 140 YK-NVVSWTAMLVG---YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE 195
K + V W +L Y + E A++ ++ P +F + S I G+ +
Sbjct: 354 VKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRN--PANFVMLSNIY--GDAGRFD 409
Query: 196 EGAQFHGIALVSGL-----ISFVTVSNALVSLYG---KCGSIEDCHRLFSEM 239
+ A+ +G +S++ + LV Y K E+ R+ E+
Sbjct: 410 DAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 175/316 (55%), Gaps = 11/316 (3%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+R++F +M ER+++SWT+++ ++G EA +F M + GS G
Sbjct: 164 ARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLM-------PERNLGSWNALVDG 216
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
++ + A + +D I + ++++D Y K + SA +F+E +V +W+A+
Sbjct: 217 LVKSGDLVNAKKLFDEMPKRD-IISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSAL 275
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE--EGAQFHGIALVS 207
++GY QNG EA K+F +M V PD+F + ++S+C + E E + ++
Sbjct: 276 ILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMN 335
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
S V AL+ + KCG ++ +LF EM +D VS+ +++ + G +E IRLF
Sbjct: 336 KFSSHYVVP-ALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLF 394
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSR 327
E M+ G+ PD+V F +L VC ++RLVE+G + FE M K++ I+ DHYSCI++L SR
Sbjct: 395 EKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSR 454
Query: 328 AGRLEEARDFINQMLF 343
G+L+EA + I M F
Sbjct: 455 TGKLKEAYELIKSMPF 470
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 154/310 (49%), Gaps = 21/310 (6%)
Query: 45 WTSMISGCTQNGLHREAIDVF-REMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYI 103
W +I G + L E + + R MR+ + D+YTF ++ C ++ G+ H +
Sbjct: 77 WNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLV 136
Query: 104 IKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAV 163
++ GF ++ G++ VD Y KC+ + SA VF EM +N VSWTA++V Y ++G EEA
Sbjct: 137 LRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAK 196
Query: 164 KIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLY 223
+F M + + + + ++ S G+L + + +IS+ + ++ Y
Sbjct: 197 SMFDLMPERNLGSWNALVDGLVKS-GDLVN---AKKLFDEMPKRDIISYTS----MIDGY 248
Query: 224 GKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFI 283
K G + LF E D +W+AL+ Y+Q G+ NE ++F M +KPD+ +
Sbjct: 249 AKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMV 308
Query: 284 GVLSVCSRT---RLVEKGNQ-IFESMTK--EHGIIPIQDHYSCIIDLFSRAGRLEEARDF 337
G++S CS+ L EK + + + M K H ++P +ID+ ++ G ++ A
Sbjct: 309 GLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVP------ALIDMNAKCGHMDRAAKL 362
Query: 338 INQMLFRDSV 347
+M RD V
Sbjct: 363 FEEMPQRDLV 372
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 11/246 (4%)
Query: 97 NQAHSYIIKTGF-KDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQ 155
NQ H+ II+ G +D + S+ + +VF+ + W ++ GY
Sbjct: 27 NQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSN 86
Query: 156 NGYSEEAVKIFCDMQKYGVV-PDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT 214
E V I M + G+ PD++T V+ C N + G+ HG+ L G V
Sbjct: 87 KFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVV 146
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
V + V YGKC + ++F EM ++ VSWTALV AY + G+ E +F+ M
Sbjct: 147 VGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERN 206
Query: 275 LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
L G++ ++ + ++F+ M K I Y+ +ID +++ G + A
Sbjct: 207 LGSWNALVDGLV----KSGDLVNAKKLFDEMPKRDII-----SYTSMIDGYAKGGDMVSA 257
Query: 335 RDFINQ 340
RD +
Sbjct: 258 RDLFEE 263
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 167/319 (52%), Gaps = 3/319 (0%)
Query: 26 MIEDSRQLFCDMRER-DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSML 84
++ + +LFC + E + +W +M+ G + H + I++FR++++ +E D + S++
Sbjct: 381 LLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVI 440
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV 144
++C + A+ G H Y++KT I ++L+D+Y K + A +F E NV+
Sbjct: 441 SSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEAD-TNVI 499
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
+W AM+ Y SE+A+ +F M P TL +++ +C N SLE G H
Sbjct: 500 TWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYI 559
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
+ +++S AL+ +Y KCG +E LF KD V W ++S Y G I
Sbjct: 560 TETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAI 619
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
LF+ M +KP TF+ +LS C+ LVE+G ++F M ++ + P HYSC++DL
Sbjct: 620 ALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDL 678
Query: 325 FSRAGRLEEARDFINQMLF 343
SR+G LEEA + M F
Sbjct: 679 LSRSGNLEEAESTVMSMPF 697
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 169/315 (53%), Gaps = 3/315 (0%)
Query: 34 FCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMAL 93
F ++ + D SWTS+I+ ++G E+ D+F EM+++ + D ++ G +M +
Sbjct: 288 FRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLV 347
Query: 94 QEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK-NVVSWTAMLVG 152
+G H ++I+ F + ++L+ MYCK + AE +F +S + N +W ML G
Sbjct: 348 PQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKG 407
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISF 212
YG+ + +++F +Q G+ D + SVISSC ++ ++ G H + + L
Sbjct: 408 YGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLT 467
Query: 213 VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLT 272
++V N+L+ LYGK G + R+F E + ++W A++++Y ++ + I LF+ M++
Sbjct: 468 ISVVNSLIDLYGKMGDLTVAWRMFCEAD-TNVITWNAMIASYVHCEQSEKAIALFDRMVS 526
Query: 273 HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLE 332
KP +T + +L C T +E+G I +T+ + + + +ID++++ G LE
Sbjct: 527 ENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLS-AALIDMYAKCGHLE 585
Query: 333 EARDFINQMLFRDSV 347
++R+ + +D+V
Sbjct: 586 KSRELFDAGNQKDAV 600
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 137/273 (50%), Gaps = 4/273 (1%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
S ++F + RD W S+I NG + ++ F M D +T +++AC
Sbjct: 78 SSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAE 137
Query: 90 VMALQEGNQAHSYIIKT-GFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
++ G H ++K GF N G++ V Y KC ++ A VF EM ++VV+WTA
Sbjct: 138 LLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTA 197
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGV---VPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
++ G+ QNG SE + C M G P+ TL +C NL +L+EG HG A+
Sbjct: 198 IISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAV 257
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
+GL S V +++ S Y K G+ + + F E+ +D SWT+++++ ++ G E+
Sbjct: 258 KNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFD 317
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKG 298
+F M G+ PD V +++ + LV +G
Sbjct: 318 MFWEMQNKGMHPDGVVISCLINELGKMMLVPQG 350
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 151/312 (48%), Gaps = 5/312 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQ---YTFGSM 83
++D+ +F +M +RD ++WT++ISG QNG + +M S + D+ T
Sbjct: 177 LQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECG 236
Query: 84 LTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV 143
AC + AL+EG H + +K G + + S++ Y K + A F+E+ +++
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDM 296
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGI 203
SWT+++ ++G EE+ +F +MQ G+ PD + +I+ G + + +G FHG
Sbjct: 297 FSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGF 356
Query: 204 ALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFGKANE 262
+ TV N+L+S+Y K + +LF ++ + ++ +W ++ Y + +
Sbjct: 357 VIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVK 416
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
I LF + G++ D + V+S CS V G + + K + I + +I
Sbjct: 417 CIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISV-VNSLI 475
Query: 323 DLFSRAGRLEEA 334
DL+ + G L A
Sbjct: 476 DLYGKMGDLTVA 487
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 122/252 (48%), Gaps = 10/252 (3%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
++FC+ + + I+W +MI+ +AI +F M SE + T ++L AC
Sbjct: 489 RMFCEA-DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTG 547
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLV 151
+L+ G H YI +T + N+ +AL+DMY KC ++ + +F + K+ V W M+
Sbjct: 548 SLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMIS 607
Query: 152 GYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQF----HGIALVS 207
GYG +G E A+ +F M++ V P T +++S+C + +E+G + H +
Sbjct: 608 GYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKP 667
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF-KDEVSWTALVSAYSQFGKANETIRL 266
L + + LV L + G++E+ M F D V W L+S+ G+ IR+
Sbjct: 668 NLKHY----SCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRM 723
Query: 267 FESMLTHGLKPD 278
E + + D
Sbjct: 724 AERAVASDPQND 735
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 5/252 (1%)
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C ++L+ + ++ II G +NI+ S L+ Y + VF ++ +++ W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
+++ + NG ++ F M G PD FT V+S+C L G HG+ L
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 207 SGLISFVT-VSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
G T V + V Y KCG ++D +F EM +D V+WTA++S + Q G++ +
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 266 LFESMLTHGL---KPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
M + G KP+ T CS +++G + ++G+ + S +
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEG-RCLHGFAVKNGLASSKFVQSSMF 272
Query: 323 DLFSRAGRLEEA 334
+S++G EA
Sbjct: 273 SFYSKSGNPSEA 284
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 180/334 (53%), Gaps = 12/334 (3%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
D Y G L+ DS ++F + E+D +SW +++SG +NG +EA+ VF M E +E
Sbjct: 127 DMYSKYGHLV---DSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEI 183
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
++T S++ C + LQ+G Q H+ ++ TG +D + G+A++ Y + A V+
Sbjct: 184 SEFTLSSVVKTCASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVY 242
Query: 136 KEMS-YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASL 194
++ + + V +++ G +N +EA + + P+ L S ++ C + + L
Sbjct: 243 NSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDL 297
Query: 195 EEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAY 254
G Q H +AL +G +S + N L+ +YGKCG I +F + K VSWT+++ AY
Sbjct: 298 WIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAY 357
Query: 255 SQFGKANETIRLFESMLTH--GLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGII 312
+ G + + +F M G+ P+ VTF+ V+S C+ LV++G + F M +++ ++
Sbjct: 358 AVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLV 417
Query: 313 PIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDS 346
P +HY C ID+ S+AG EE + +M+ D+
Sbjct: 418 PGTEHYVCFIDILSKAGETEEIWRLVERMMENDN 451
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 152/305 (49%), Gaps = 8/305 (2%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
LF ++ +RD S S +S ++G + + +F ++ + +TF +L AC +
Sbjct: 39 HLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLS 98
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLV 151
+ G Q H+ +IK G + + +AL+DMY K + + VF+ + K++VSW A+L
Sbjct: 99 YPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLS 158
Query: 152 GYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLIS 211
G+ +NG +EA+ +F M + V +FTL SV+ +C +L L++G Q H + +V+G
Sbjct: 159 GFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR-D 217
Query: 212 FVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFGKANETIRLFESM 270
V + A++S Y G I + ++++ + DEV +L+S + E L
Sbjct: 218 LVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ 277
Query: 271 LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGR 330
+P+ L+ CS + G QI + +G + + ++D++ + G+
Sbjct: 278 -----RPNVRVLSSSLAGCSDNSDLWIGKQI-HCVALRNGFVSDSKLCNGLMDMYGKCGQ 331
Query: 331 LEEAR 335
+ +AR
Sbjct: 332 IVQAR 336
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 107/232 (46%), Gaps = 13/232 (5%)
Query: 131 AETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGN 190
A+ +F E+ +++ S + L + ++G + + +F + + T V+ +C
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 191 LASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTAL 250
L+ E G Q H + + G + AL+ +Y K G + D R+F + KD VSW AL
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 251 VSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHG 310
+S + + GK E + +F +M ++ + T V+ C+ +++++G Q+ H
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQV-------HA 209
Query: 311 IIPIQDH-----YSCIIDLFSRAGRLEEARDFINQM-LFRDSVLMQLVGQPC 356
++ + + +I +S G + EA N + + D V++ + C
Sbjct: 210 MVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 163/320 (50%), Gaps = 33/320 (10%)
Query: 58 HREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSA 117
H AI V+R++ + + D +TF +L V + G Q H ++ GF +++ +
Sbjct: 97 HSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTG 156
Query: 118 LVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQ---------------------- 155
L+ MY C + A +F EM K+V W A+L GYG+
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEV 216
Query: 156 -----------NGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
+G + EA+++F M V PD+ TL +V+S+C +L SLE G +
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
G+ V+++NA++ +Y K G+I +F + ++ V+WT +++ + G E +
Sbjct: 277 DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEAL 336
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
+F M+ G++P+ VTFI +LS CS V+ G ++F SM ++GI P +HY C+IDL
Sbjct: 337 AMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDL 396
Query: 325 FSRAGRLEEARDFINQMLFR 344
RAG+L EA + I M F+
Sbjct: 397 LGRAGKLREADEVIKSMPFK 416
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 138/247 (55%), Gaps = 5/247 (2%)
Query: 12 IRKWDSYLV-LGRLLMIEDSRQLFCDMR--ERDSISWTSMISGCTQNGLHREAIDVFREM 68
+ W++ L G++ ++++R L M R+ +SWT +ISG ++G EAI+VF+ M
Sbjct: 182 VNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRM 241
Query: 69 RSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSV 128
E +E D+ T ++L+AC + +L+ G + SY+ G + +A++DMY K ++
Sbjct: 242 LMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNI 301
Query: 129 KSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSC 188
A VF+ ++ +NVV+WT ++ G +G+ EA+ +F M K GV P+D T +++S+C
Sbjct: 302 TKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSAC 361
Query: 189 GNLASLEEGAQ-FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS- 246
++ ++ G + F+ + G+ + ++ L G+ G + + + M FK +
Sbjct: 362 SHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAI 421
Query: 247 WTALVSA 253
W +L++A
Sbjct: 422 WGSLLAA 428
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 39/281 (13%)
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
L+ Q+H Y+I TG + + ++ ++ A +VF N M+
Sbjct: 28 LKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRA 87
Query: 153 YG----QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
N +S A+ ++ + PD FT V+ ++ + G Q HG +V G
Sbjct: 88 LSLLDEPNAHSI-AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFG 146
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKD------------------------- 243
S V V L+ +Y CG + D ++F EM KD
Sbjct: 147 FDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLE 206
Query: 244 --------EVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLV 295
EVSWT ++S Y++ G+A+E I +F+ ML ++PD+VT + VLS C+ +
Sbjct: 207 MMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSL 266
Query: 296 EKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARD 336
E G +I S G+ + +ID+++++G + +A D
Sbjct: 267 ELGERIC-SYVDHRGMNRAVSLNNAVIDMYAKSGNITKALD 306
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 171/317 (53%), Gaps = 11/317 (3%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++++R++F +M ER I+WT+M++G QN +D R++ M E + ++ SML
Sbjct: 188 VDEAREIFDEMSERSVITWTTMVTGYGQNN----RVDDARKIFDVMPEKTEVSWTSMLMG 243
Query: 87 CGGVMALQEGN-QAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
+Q G + + + + A +A++ + + A VF M +N S
Sbjct: 244 -----YVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDAS 298
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W ++ + +NG+ EA+ +F MQK GV P TL S++S C +LASL G Q H +
Sbjct: 299 WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV 358
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
V V++ L+++Y KCG + +F KD + W +++S Y+ G E ++
Sbjct: 359 RCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALK 418
Query: 266 LF-ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
+F E L+ KP++VTF+ LS CS +VE+G +I+ESM G+ PI HY+C++D+
Sbjct: 419 VFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDM 478
Query: 325 FSRAGRLEEARDFINQM 341
RAGR EA + I+ M
Sbjct: 479 LGRAGRFNEAMEMIDSM 495
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 123/236 (52%), Gaps = 3/236 (1%)
Query: 21 LGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTF 80
LG+ I +R++F M+ER+ SW ++I +NG EA+D+F M+ + + T
Sbjct: 275 LGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTL 334
Query: 81 GSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY 140
S+L+ C + +L G Q H+ +++ F ++Y S L+ MY KC + ++ +F
Sbjct: 335 ISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS 394
Query: 141 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV-PDDFTLGSVISSCGNLASLEEGAQ 199
K+++ W +++ GY +G EEA+K+FC+M G P++ T + +S+C +EEG +
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLK 454
Query: 200 -FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSA 253
+ + V G+ +V + G+ G + + MT + D W +L+ A
Sbjct: 455 IYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 144/285 (50%), Gaps = 24/285 (8%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I+++R++F M ER+ +SWT+++ G NG +DV + +M E ++ ++ ML
Sbjct: 95 IDEARKVFDLMPERNVVSWTALVKGYVHNG----KVDVAESLFWKMPEKNKVSWTVML-- 148
Query: 87 CGGVMALQEG--NQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV 144
+ LQ+G + A KDNI A ++++ CK V A +F EMS ++V+
Sbjct: 149 ---IGFLQDGRIDDACKLYEMIPDKDNI-ARTSMIHGLCKEGRVDEAREIFDEMSERSVI 204
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPD--DFTLGSVISSCGNLASLEEGAQFHG 202
+WT M+ GYGQN ++A KIF V+P+ + + S++ +E+ +
Sbjct: 205 TWTTMVTGYGQNNRVDDARKIF------DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFE 258
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
+ V +I+ NA++S G+ G I R+F M +++ SW ++ + + G E
Sbjct: 259 VMPVKPVIA----CNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELE 314
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK 307
+ LF M G++P T I +LSVC+ + G Q+ + +
Sbjct: 315 ALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVR 359
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 159/335 (47%), Gaps = 37/335 (11%)
Query: 21 LGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTF 80
L R+ I ++R+LF + SW SM++G N + R+A R++ EM + + ++
Sbjct: 27 LSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDA----RKLFDEMPDRNIISW 82
Query: 81 GSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY 140
+++ G M E ++A + + N+ + +ALV Y V AE++F +M
Sbjct: 83 NGLVS---GYMKNGEIDEARK-VFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE 138
Query: 141 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLG--SVISSCGNLASLEEGA 198
KN VSWT ML+G+ Q+G ++A K+ Y ++PD + S+I ++E
Sbjct: 139 KNKVSWTVMLIGFLQDGRIDDACKL------YEMIPDKDNIARTSMIHGLCKEGRVDEAR 192
Query: 199 QFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFG 258
+ +I++ T +V+ YG+ ++D ++F M K EVSWT+++ Y Q G
Sbjct: 193 EIFDEMSERSVITWTT----MVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNG 248
Query: 259 KANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY 318
+ + LFE M +KP + ++S + + K ++F+SM + + +
Sbjct: 249 RIEDAEELFEVM---PVKP-VIACNAMISGLGQKGEIAKARRVFDSMKERN-----DASW 299
Query: 319 SCIIDLFSRAGRLEEARDFINQMLFRDSVLMQLVG 353
+I + R G EA D +LMQ G
Sbjct: 300 QTVIKIHERNGFELEALDLF--------ILMQKQG 326
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 173/350 (49%), Gaps = 39/350 (11%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+EDSR F +R+++ + W +++SG N + +F +M +YTF + L +
Sbjct: 367 LEDSRLCFDYIRDKNIVCWNALLSG-YANKDGPICLSLFLQMLQMGFRPTEYTFSTALKS 425
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSA--------------- 131
C + E Q HS I++ G++DN Y S+L+ Y K + + A
Sbjct: 426 C----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVP 481
Query: 132 ---------------ETV--FKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGV 174
E+V + + VSW + ++ Y EE +++F M + +
Sbjct: 482 LNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNI 541
Query: 175 VPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT-VSNALVSLYGKCGSIEDCH 233
PD +T S++S C L L G+ HG+ + T V N L+ +YGKCGSI
Sbjct: 542 RPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVM 601
Query: 234 RLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTR 293
++F E K+ ++WTAL+S G E + F+ L+ G KPD+V+FI +L+ C
Sbjct: 602 KVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGG 661
Query: 294 LVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLF 343
+V++G +F+ M K++G+ P DHY C +DL +R G L+EA I +M F
Sbjct: 662 MVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPF 710
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 161/308 (52%), Gaps = 10/308 (3%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
++F M ER+ +S+ ++I G ++ G +A VF EMR +Q T +L+ +
Sbjct: 70 KVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCAS--L 127
Query: 92 ALQEGNQAHSYIIKTG-FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAML 150
++ G Q H +K G F + + G+ L+ +Y + ++ AE VF++M +K++ +W M+
Sbjct: 128 DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMM 187
Query: 151 VGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLI 210
G G+ +E + F ++ + G + + V+ + L+ Q H A GL
Sbjct: 188 SLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLD 247
Query: 211 SFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESM 270
++V N+L+S YGKCG+ R+F + D VSW A++ A ++ + ++LF SM
Sbjct: 248 CEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSM 307
Query: 271 LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK---EHGIIPIQDHYSCIIDLFSR 327
HG P++ T++ VL V S +L+ G QI + K E GI+ + +ID +++
Sbjct: 308 PEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV----LGNALIDFYAK 363
Query: 328 AGRLEEAR 335
G LE++R
Sbjct: 364 CGNLEDSR 371
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 1/273 (0%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
GRL ++E + Q+F DM + +W M+S G +E + FRE+ + +F
Sbjct: 160 GRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFL 219
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
+L V L Q H K G I ++L+ Y KC + AE +F++
Sbjct: 220 GVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSW 279
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
++VSW A++ ++ +A+K+F M ++G P+ T SV+ + L G Q H
Sbjct: 280 DIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIH 339
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKAN 261
G+ + +G + + + NAL+ Y KCG++ED F + K+ V W AL+S Y+
Sbjct: 340 GMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN-KDGP 398
Query: 262 ETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRL 294
+ LF ML G +P + TF L C T L
Sbjct: 399 ICLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL 431
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 12/180 (6%)
Query: 183 SVISSCGNLASLEEGAQFHG--IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT 240
S+++ C S H I L S L+ V V N ++SLY K G + ++F +M
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 241 FKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQ 300
+++VS+ ++ YS++G ++ +F M G P++ T G+LS S V G Q
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD--VRAGTQ 134
Query: 301 IFESMTKEHGIIPIQDHY--SCIIDLFSRAGRLEEARDFINQMLFRD----SVLMQLVGQ 354
+ ++ ++G+ + D + +C++ L+ R LE A M F+ + +M L+G
Sbjct: 135 L-HGLSLKYGLF-MADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGH 192
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 158/333 (47%), Gaps = 34/333 (10%)
Query: 43 ISWTSMISGCTQNGLHREAIDVFREMRSEM-LETDQYTFGSMLTACGGVMALQEGNQAHS 101
IS T +S G H +A+++F +M S L D + F L +C G H+
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 102 YIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEE 161
+ +K+ F N + G AL+DMY KC SV A +F E+ +N V W AM+ Y G +E
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 162 AVKIFCDMQ---------------------------------KYGVVPDDFTLGSVISSC 188
AV+++ M ++ P+ TL +++S+C
Sbjct: 133 AVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSAC 192
Query: 189 GNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWT 248
+ + + H A + + + + LV YG+CGSI +F M +D V+W+
Sbjct: 193 SAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWS 252
Query: 249 ALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKE 308
+L+SAY+ G A ++ F+ M + PD + F+ VL CS L ++ F+ M +
Sbjct: 253 SLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGD 312
Query: 309 HGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+G+ +DHYSC++D+ SR GR EEA I M
Sbjct: 313 YGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAM 345
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 126/273 (46%), Gaps = 35/273 (12%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVF---------------- 65
G+ L + +R+LF ++ +R+++ W +MIS T G +EA++++
Sbjct: 94 GKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAII 153
Query: 66 -----------------REMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGF 108
R+M + + T ++++AC + A + + HSY +
Sbjct: 154 KGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLI 213
Query: 109 KDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCD 168
+ + S LV+ Y +C S+ + VF M ++VV+W++++ Y +G +E A+K F +
Sbjct: 214 EPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQE 273
Query: 169 MQKYGVVPDDFTLGSVISSCGNLASLEEG-AQFHGIALVSGLISFVTVSNALVSLYGKCG 227
M+ V PDD +V+ +C + +E F + GL + + LV + + G
Sbjct: 274 MELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVG 333
Query: 228 SIEDCHRLFSEMTFKDEV-SWTALVSAYSQFGK 259
E+ +++ M K +W AL+ A +G+
Sbjct: 334 RFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 178/347 (51%), Gaps = 32/347 (9%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRS-EMLETDQYTFGSMLT 85
IE +R++F +M ERD +SW SMISG +Q+G + +++ M + + + T S+
Sbjct: 183 IESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQ 242
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV- 144
ACG L G + H +I+ + ++ +A++ Y KC S+ A +F EMS K+ V
Sbjct: 243 ACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVT 302
Query: 145 ------------------------------SWTAMLVGYGQNGYSEEAVKIFCDMQKYGV 174
+W AM+ G QN + EE + F +M + G
Sbjct: 303 YGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGS 362
Query: 175 VPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHR 234
P+ TL S++ S ++L+ G + H A+ +G + + V+ +++ Y K G + R
Sbjct: 363 RPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQR 422
Query: 235 LFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRL 294
+F + ++WTA+++AY+ G ++ LF+ M G KPD VT VLS + +
Sbjct: 423 VFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGD 482
Query: 295 VEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+ IF+SM ++ I P +HY+C++ + SRAG+L +A +FI++M
Sbjct: 483 SDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKM 529
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 132/254 (51%), Gaps = 10/254 (3%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFRE------MRSEMLETDQYTFGSMLT 85
+F ++ R++ S+ +++ T ++ +A +F S+ D + +L
Sbjct: 78 HVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLK 137
Query: 86 ACGGVMALQEGN---QAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN 142
A G G+ Q H ++I+ GF +++ G+ ++ Y KC +++SA VF EMS ++
Sbjct: 138 ALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERD 197
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQK-YGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
VVSW +M+ GY Q+G E+ K++ M P+ T+ SV +CG + L G + H
Sbjct: 198 VVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVH 257
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKAN 261
+ + + +++ NA++ Y KCGS++ LF EM+ KD V++ A++S Y G
Sbjct: 258 KKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVK 317
Query: 262 ETIRLFESMLTHGL 275
E + LF M + GL
Sbjct: 318 EAMALFSEMESIGL 331
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 143/319 (44%), Gaps = 41/319 (12%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
+++++ LF +M +W +MISG QN H E I+ FREM + T S+L
Sbjct: 315 LVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLP 374
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
+ L+ G + H++ I+ G +NIY ++++D Y K + A+ VF +++++
Sbjct: 375 SLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIA 434
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIA 204
WTA++ Y +G S+ A +F MQ G PDD TL +V+S+ + + F +
Sbjct: 435 WTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSML 494
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS--WTALVSAYSQFGKANE 262
+ V +VS+ + G + D S+M D ++ W AL++ S G E
Sbjct: 495 TKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPI-DPIAKVWGALLNGASVLGDL-E 552
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
R C R +FE + G +Y+ +
Sbjct: 553 IARF---------------------ACDR---------LFEMEPENTG------NYTIMA 576
Query: 323 DLFSRAGRLEEARDFINQM 341
+L+++AGR EEA N+M
Sbjct: 577 NLYTQAGRWEEAEMVRNKM 595
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 183/354 (51%), Gaps = 38/354 (10%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
+I ++ ++F ++ E D IS T++I + H EA F+ + + +++TFG+++
Sbjct: 42 LIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIG 101
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAE------------- 132
+ ++ G Q H Y +K G N++ GSA+++ Y K ++ A
Sbjct: 102 SSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 133 ------------------TVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGV 174
++F+ M ++VV+W A++ G+ Q G +EEAV F DM + GV
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 175 V-PDDFTLGSVISSCGNLASLEEGAQFHGIAL-VSGLISFVTVSNALVSLYGKCGSIEDC 232
V P++ T I++ N+AS G H A+ G V V N+L+S Y KCG++ED
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 233 HRLFSEMT--FKDEVSWTALVSAYSQFGKANETIRLFESMLTH-GLKPDKVTFIGVLSVC 289
F+++ ++ VSW +++ Y+ G+ E + +FE M+ L+P+ VT +GVL C
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 290 SRTRLVEKGNQIFESMTKEHGIIPIQD--HYSCIIDLFSRAGRLEEARDFINQM 341
+ L+++G F ++ + + HY+C++D+ SR+GR +EA + I M
Sbjct: 342 NHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSM 395
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 173/350 (49%), Gaps = 41/350 (11%)
Query: 41 DSISWTSMISGCTQN---GLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGN 97
+S W +I N I V+ MR+ + D +TF +L + + L G
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 98 QAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK--------------------- 136
+ H+ I+ G + + ++L++MY C ++SA+ VF
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 137 ----------EMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQ-----KYGVVPDDFTL 181
EM +NV+SW+ ++ GY G +EA+ +F +MQ + V P++FT+
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 182 GSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF 241
+V+S+CG L +LE+G H + + + AL+ +Y KCGS+E R+F+ +
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 242 KDEV-SWTALVSAYSQFGKANETIRLFESMLT-HGLKPDKVTFIGVLSVCSRTRLVEKGN 299
K +V +++A++ + +G +E +LF M T + P+ VTF+G+L C L+ +G
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 300 QIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLM 349
F+ M +E GI P HY C++DL+ R+G ++EA FI M VL+
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLI 372
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 142/254 (55%), Gaps = 10/254 (3%)
Query: 15 WDSYL-VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR---- 69
W+S + + +I+D+R+LF +M ER+ ISW+ +I+G G ++EA+D+FREM+
Sbjct: 131 WNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKP 190
Query: 70 -SEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSV 128
+ +++T ++L+ACG + AL++G H+YI K + +I G+AL+DMY KC S+
Sbjct: 191 NEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSL 250
Query: 129 KSAETVFKEM-SYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKY-GVVPDDFTLGSVIS 186
+ A+ VF + S K+V +++AM+ G ++E ++F +M + P+ T ++
Sbjct: 251 ERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILG 310
Query: 187 SCGNLASLEEGAQFHGIALVS-GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEV 245
+C + + EG + + + G+ + +V LYG+ G I++ + M + +V
Sbjct: 311 ACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDV 370
Query: 246 -SWTALVSAYSQFG 258
W +L+S G
Sbjct: 371 LIWGSLLSGSRMLG 384
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 163/301 (54%), Gaps = 1/301 (0%)
Query: 42 SISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHS 101
+ + +MI G EA+ + EM E D +T+ +L AC + +++EG Q H
Sbjct: 97 TFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHG 156
Query: 102 YIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEE 161
+ K G + +++ ++L++MY +C ++ + VF+++ K SW++M+ G E
Sbjct: 157 QVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSE 216
Query: 162 AVKIFCDM-QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALV 220
+ +F M + + ++ + S + +C N +L G HG L + + V +LV
Sbjct: 217 CLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLV 276
Query: 221 SLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKV 280
+Y KCG ++ +F +M ++ ++++A++S + G+ +R+F M+ GL+PD V
Sbjct: 277 DMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHV 336
Query: 281 TFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQ 340
++ VL+ CS + LV++G ++F M KE + P +HY C++DL RAG LEEA + I
Sbjct: 337 VYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQS 396
Query: 341 M 341
+
Sbjct: 397 I 397
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 118/234 (50%), Gaps = 3/234 (1%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEM-LETDQYTF 80
GR +E S +F + + + SW+SM+S G+ E + +FR M SE L+ ++
Sbjct: 178 GRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGM 237
Query: 81 GSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY 140
S L AC AL G H ++++ + NI ++LVDMY KC + A +F++M
Sbjct: 238 VSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEK 297
Query: 141 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
+N ++++AM+ G +G E A+++F M K G+ PD SV+++C + ++EG +
Sbjct: 298 RNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRV 357
Query: 201 HGIALVSGLISFVTVS-NALVSLYGKCGSIEDCHRLFSEMTF-KDEVSWTALVS 252
L G + LV L G+ G +E+ + K++V W +S
Sbjct: 358 FAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 2/222 (0%)
Query: 127 SVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVIS 186
S+ A ++F+ + + M+ GY EEA+ + +M + G PD+FT ++
Sbjct: 81 SMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLK 140
Query: 187 SCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS 246
+C L S+ EG Q HG GL + V V N+L+++YG+CG +E +F ++ K S
Sbjct: 141 ACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS 200
Query: 247 WTALVSAYSQFGKANETIRLFESMLTH-GLKPDKVTFIGVLSVCSRTRLVEKGNQIFESM 305
W+++VSA + G +E + LF M + LK ++ + L C+ T + G I +
Sbjct: 201 WSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL 260
Query: 306 TKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ + I S ++D++ + G L++A +M R+++
Sbjct: 261 LRNISELNIIVQTS-LVDMYVKCGCLDKALHIFQKMEKRNNL 301
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 181/363 (49%), Gaps = 33/363 (9%)
Query: 20 VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYT 79
+ G L + + ++F ++ + + + +MI + G E++ F M+S + D+YT
Sbjct: 45 ICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYT 104
Query: 80 FGSMLTACGGVMALQEGNQAHSYIIKTGF------------------------------- 108
+ +L +C + L+ G H +I+TGF
Sbjct: 105 YAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMS 164
Query: 109 KDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCD 168
+ N+ + ++ +C V+ +FK+MS +++VSW +M+ + G EA+++FC+
Sbjct: 165 ERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCE 224
Query: 169 MQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLIS-FVTVSNALVSLYGKCG 227
M G PD+ T+ +V+ +L L+ G H A SGL F+TV NALV Y K G
Sbjct: 225 MIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSG 284
Query: 228 SIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG-LKPDKVTFIGVL 286
+E +F +M ++ VSW L+S + GK I LF++M+ G + P++ TF+GVL
Sbjct: 285 DLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVL 344
Query: 287 SVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDS 346
+ CS T VE+G ++F M + + +HY ++DL SR+GR+ EA F+ M +
Sbjct: 345 ACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNAN 404
Query: 347 VLM 349
M
Sbjct: 405 AAM 407
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 117/236 (49%), Gaps = 4/236 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E LF M ER +SW SMIS ++ G REA+++F EM + + D+ T ++L
Sbjct: 184 VERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPI 243
Query: 87 CGGVMALQEGNQAHSYIIKTG-FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
+ L G HS +G FKD I G+ALVD YCK +++A +F++M +NVVS
Sbjct: 244 SASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVS 303
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYG-VVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
W ++ G NG E + +F M + G V P++ T V++ C +E G + G+
Sbjct: 304 WNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLM 363
Query: 205 LVSGLISFVTVS-NALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSAYSQFG 258
+ + T A+V L + G I + + M + W +L+SA G
Sbjct: 364 MERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Query: 209 LISFVTVSNALVSLY-GKCGSIED---CHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
L F+ SN L++ + CGS+ + +R+FS + + + + A++ YS G E++
Sbjct: 28 LRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESL 87
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
F SM + G+ D+ T+ +L CS + G + + + G + +++L
Sbjct: 88 SFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRT-GFHRLGKIRIGVVEL 146
Query: 325 FSRAGRLEEARDFINQMLFRDSVLMQLV 352
++ GR+ +A+ ++M R+ V+ L+
Sbjct: 147 YTSGGRMGDAQKVFDEMSERNVVVWNLM 174
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 167/318 (52%), Gaps = 6/318 (1%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLE--TDQY-TFGSMLTACGG 89
+F + +S + +MI C+++ + F M E E T Y TF ++ AC
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 90 VMALQEGNQAHSYIIKTG-FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
G Q H +++K G F + + + ++ +Y + + + A VF E+ +VV W
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDV 188
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
++ GY + G E +++F +M G+ PD+F++ + +++C + +L +G H
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKR 248
Query: 209 LI-SFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
I S V V ALV +Y KCG IE +F ++T ++ SW AL+ Y+ +G A +
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCL 308
Query: 268 ESM-LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
+ + G+KPD V +GVL+ C+ +E+G + E+M +GI P +HYSCI+DL
Sbjct: 309 DRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMC 368
Query: 327 RAGRLEEARDFINQMLFR 344
RAGRL++A D I +M +
Sbjct: 369 RAGRLDDALDLIEKMPMK 386
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 130/232 (56%), Gaps = 4/232 (1%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
++ D+R++F ++ + D + W +++G + GL E ++VF+EM +E D+++ + LT
Sbjct: 167 LLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALT 226
Query: 86 ACGGVMALQEGNQAHSYIIKTGF-KDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV 144
AC V AL +G H ++ K + + +++ G+ALVDMY KC +++A VF++++ +NV
Sbjct: 227 ACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVF 286
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKY-GVVPDDFTLGSVISSCGNLASLEEG-AQFHG 202
SW A++ GY GY+++A +++ G+ PD L V+++C + LEEG
Sbjct: 287 SWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLEN 346
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSA 253
+ G+ + +V L + G ++D L +M K S W AL++
Sbjct: 347 MEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 173/342 (50%), Gaps = 33/342 (9%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVF-REMRSEMLETDQYTFGSMLTACGGVM 91
+F ++ + +W MI + N REA+ +F M S + D++TF ++ AC
Sbjct: 74 VFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASS 133
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLV 151
+++ G Q H IK GF ++++ + L+D+Y KC S VF +M +++VSWT ML
Sbjct: 134 SIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLY 193
Query: 152 G-------------------------------YGQNGYSEEAVKIFCDMQKYGVVPDDFT 180
G Y +N +EA ++F MQ V P++FT
Sbjct: 194 GLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFT 253
Query: 181 LGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT 240
+ +++ + L SL G H A +G + + AL+ +Y KCGS++D ++F M
Sbjct: 254 IVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ 313
Query: 241 FKDEVSWTALVSAYSQFGKANETIRLFESMLTHG-LKPDKVTFIGVLSVCSRTRLVEKGN 299
K +W +++++ G E + LFE M ++PD +TF+GVLS C+ T V+ G
Sbjct: 314 GKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGL 373
Query: 300 QIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+ F M + +GI PI++H +C+I L +A +E+A + + M
Sbjct: 374 RYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESM 415
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 116/215 (53%), Gaps = 2/215 (0%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++ + +F M R+ +SWT+MI+ +N EA +FR M+ + ++ +++T ++L A
Sbjct: 201 LDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQA 260
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
+ +L G H Y K GF + + G+AL+DMY KC S++ A VF M K++ +W
Sbjct: 261 STQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATW 320
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVV-PDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
+M+ G +G EEA+ +F +M++ V PD T V+S+C N ++++G ++ +
Sbjct: 321 NSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMI 380
Query: 206 VSGLISFVTVSNA-LVSLYGKCGSIEDCHRLFSEM 239
IS + NA ++ L + +E L M
Sbjct: 381 QVYGISPIREHNACMIQLLEQALEVEKASNLVESM 415
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 37/278 (13%)
Query: 98 QAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNG 157
Q H+ IIK ++ L+ + + A VF ++ + +W M+ N
Sbjct: 38 QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNH 97
Query: 158 YSEEAVKIFCDMQ-KYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
EA+ +F M + D FT VI +C +S+ G Q HG+A+ +G + V
Sbjct: 98 KPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQ 157
Query: 217 NALVSLYGKCGSIEDCHR-------------------------------LFSEMTFKDEV 245
N L+ LY KCG + + +F++M ++ V
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 246 SWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESM 305
SWTA+++AY + + +E +LF M +KP++ T + +L ++ + G + +
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 306 TKEHGIIPIQDHY--SCIIDLFSRAGRLEEARDFINQM 341
K ++ D + + +ID++S+ G L++AR + M
Sbjct: 278 HKNGFVL---DCFLGTALIDMYSKCGSLQDARKVFDVM 312
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 170/343 (49%), Gaps = 34/343 (9%)
Query: 36 DMRERDSI-SWTSMISGCTQNGLHREAIDVFREMRS--EMLETDQYTFGSMLTACGGVMA 92
D E+ ++ + SMI ++ + ++ D +R + S L+ D YT ++ AC G+
Sbjct: 64 DRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRM 123
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMY------------------------------ 122
+ G Q H I+ GF ++ + + L+ +Y
Sbjct: 124 RETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTA 183
Query: 123 -CKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTL 181
+C V A +F+ M ++ ++W AM+ GY Q G S EA+ +F MQ GV + +
Sbjct: 184 CARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAM 243
Query: 182 GSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF 241
SV+S+C L +L++G H + + V ++ LV LY KCG +E +F M
Sbjct: 244 ISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE 303
Query: 242 KDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQI 301
K+ +W++ ++ + G + + LF M G+ P+ VTF+ VL CS V++G +
Sbjct: 304 KNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRH 363
Query: 302 FESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFR 344
F+SM E GI P +HY C++DL++RAGRLE+A I QM +
Sbjct: 364 FDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMK 406
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 126/226 (55%), Gaps = 2/226 (0%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+R+LF M ERD I+W +MISG Q G REA++VF M+ E ++ + S+L+AC
Sbjct: 193 ARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQ 252
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
+ AL +G AHSYI + K + + LVD+Y KC ++ A VF M KNV +W++
Sbjct: 253 LGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSA 312
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIALVSG 208
L G NG+ E+ +++F M++ GV P+ T SV+ C + ++EG + F + G
Sbjct: 313 LNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFG 372
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSA 253
+ + LV LY + G +ED + +M K + W++L+ A
Sbjct: 373 IEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 67/127 (52%), Gaps = 4/127 (3%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E + ++F M E++ +W+S ++G NG + +++F M+ + + + TF S+L
Sbjct: 291 MEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRG 350
Query: 87 CGGVMALQEGNQAHSYIIKT--GFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK-NV 143
C V + EG Q H ++ G + + LVD+Y + ++ A ++ ++M K +
Sbjct: 351 CSVVGFVDEG-QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHA 409
Query: 144 VSWTAML 150
W+++L
Sbjct: 410 AVWSSLL 416
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 167/318 (52%), Gaps = 6/318 (1%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM---RSEMLETDQYTFGSMLTACGG 89
+F + +S + +MI C+++ + F M E + TF ++ AC
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 90 VMALQEGNQAHSYIIKTG-FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
G Q H +++K G F + + + ++ +Y + + + A VF E+ +VV W
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDV 188
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG-IALVS 207
++ GY + G E +++F +M G+ PD+F++ + +++C + +L +G H + S
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKS 248
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
+ S V V ALV +Y KCG IE +F ++T ++ SW AL+ Y+ +G A + +
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCL 308
Query: 268 ESM-LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
E + G+KPD V +GVL+ C+ +E+G + E+M + I P +HYSCI+DL
Sbjct: 309 ERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMC 368
Query: 327 RAGRLEEARDFINQMLFR 344
RAGRL++A + I +M +
Sbjct: 369 RAGRLDDALNLIEKMPMK 386
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 132/232 (56%), Gaps = 4/232 (1%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
++ D+R++F ++ + D + W +++G + GL E ++VFREM + LE D+++ + LT
Sbjct: 167 LLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALT 226
Query: 86 ACGGVMALQEGNQAHSYIIKTGF-KDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV 144
AC V AL +G H ++ K + + +++ G+ALVDMY KC +++A VFK+++ +NV
Sbjct: 227 ACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVF 286
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKY-GVVPDDFTLGSVISSCGNLASLEEG-AQFHG 202
SW A++ GY GY+++A+ +++ G+ PD L V+++C + LEEG +
Sbjct: 287 SWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLEN 346
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSA 253
+ + + +V L + G ++D L +M K S W AL++
Sbjct: 347 MEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 164/313 (52%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
+I ++ +LFC + + D W MI G G + I++F M+ + + YT ++ +
Sbjct: 156 LIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTS 215
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
L H++ +K + Y G ALV+MY +C + SA +VF +S ++V+
Sbjct: 216 GLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVA 275
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
++++ GY + G +EA+ +F +++ G PD + V+ SC L+ G + H +
Sbjct: 276 CSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVI 335
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
GL + V +AL+ +Y KCG ++ LF+ + K+ VS+ +L+ G A+
Sbjct: 336 RLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFE 395
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
F +L GL PD++TF +L C + L+ KG +IFE M E GI P +HY ++ L
Sbjct: 396 KFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLM 455
Query: 326 SRAGRLEEARDFI 338
AG+LEEA +F+
Sbjct: 456 GMAGKLEEAFEFV 468
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 104/177 (58%)
Query: 23 RLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGS 82
R + I + +F + E D ++ +S+I+G ++ G H+EA+ +F E+R + D
Sbjct: 254 RCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAI 313
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN 142
+L +C + G + HSY+I+ G + +I SAL+DMY KC +K A ++F + KN
Sbjct: 314 VLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKN 373
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ 199
+VS+ ++++G G +G++ A + F ++ + G++PD+ T +++ +C + L +G +
Sbjct: 374 IVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQE 430
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 141/325 (43%), Gaps = 7/325 (2%)
Query: 16 DSYLV--LGRLLMIED----SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR 69
D Y L R + D +R+LF ER W S+I + + +F ++
Sbjct: 39 DPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQIL 98
Query: 70 SEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVK 129
D +T+ + + H I +G + GSA+V Y K +
Sbjct: 99 RSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIV 158
Query: 130 SAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCG 189
A +F + ++ W M++GYG G+ ++ + +F MQ G P+ +T+ ++ S
Sbjct: 159 EASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLI 218
Query: 190 NLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTA 249
+ + L H L L S V ALV++Y +C I +F+ ++ D V+ ++
Sbjct: 219 DPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSS 278
Query: 250 LVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEH 309
L++ YS+ G E + LF + G KPD V VL C+ G ++ + +
Sbjct: 279 LITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLG 338
Query: 310 GIIPIQDHYSCIIDLFSRAGRLEEA 334
+ I+ S +ID++S+ G L+ A
Sbjct: 339 LELDIKV-CSALIDMYSKCGLLKCA 362
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%)
Query: 97 NQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQN 156
+ HS++ K+ + Y + L Y + SA +F ++V W +++ Y +
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
+ +F + + PD+FT + + HGIA+VSGL
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLK 276
+A+V Y K G I + +LF + D W ++ Y G ++ I LF M G +
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 277 PDKVTFIGVLS 287
P+ T + + S
Sbjct: 205 PNCYTMVALTS 215
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 169/328 (51%), Gaps = 38/328 (11%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E++R+ F M E+ +SW +M+SG QNG +A+ +F +M + ++ T+ +++A
Sbjct: 214 LENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA 273
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE--------- 137
C I + + N + +AL+DM+ KCR ++SA +F E
Sbjct: 274 CSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVT 333
Query: 138 -----------------------MSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYG- 173
M +NVVSW +++ GY NG + A++ F DM YG
Sbjct: 334 WNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGD 393
Query: 174 VVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCH 233
PD+ T+ SV+S+CG++A LE G + + + +L+ +Y + G++ +
Sbjct: 394 SKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAK 453
Query: 234 RLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTR 293
R+F EM +D VS+ L +A++ G ET+ L M G++PD+VT+ VL+ C+R
Sbjct: 454 RVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAG 513
Query: 294 LVEKGNQIFESMTKEHGIIPIQDHYSCI 321
L+++G +IF+S+ P+ DHY+C+
Sbjct: 514 LLKEGQRIFKSIRN-----PLADHYACM 536
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 161/359 (44%), Gaps = 83/359 (23%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E +R++F + +R W MISG + G EA +F M E D ++ M+T
Sbjct: 152 VESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLF----DMMPENDVVSWTVMITG 207
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
+ K + +++A F M K+VVSW
Sbjct: 208 -----------------------------------FAKVKDLENARKYFDRMPEKSVVSW 232
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCG----------------- 189
AML GY QNG++E+A+++F DM + GV P++ T VIS+C
Sbjct: 233 NAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDE 292
Query: 190 ---------NLASLEEGAQ----------FHGIALVSGLISFVTVSNALVSLYGKCGSIE 230
A L+ A+ F+ + L+++ NA++S Y + G +
Sbjct: 293 KRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTW----NAMISGYTRIGDMS 348
Query: 231 DCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG-LKPDKVTFIGVLSVC 289
+LF M ++ VSW +L++ Y+ G+A I FE M+ +G KPD+VT I VLS C
Sbjct: 349 SARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSAC 408
Query: 290 SRTRLVEKGNQIFESMTKEHGIIPIQDH-YSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+E G+ I + + K I + D Y +I +++R G L EA+ ++M RD V
Sbjct: 409 GHMADLELGDCIVDYIRKNQ--IKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVV 465
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 133/325 (40%), Gaps = 86/325 (26%)
Query: 61 AIDVFR--EMRSEM-LETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSA 117
A DV R E RS + D ++F ++ + G + G + + K GF + Y +
Sbjct: 87 ANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG-----RFGILFQALVEKLGFFKDPYVRNV 141
Query: 118 LVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPD 177
++DMY K SV+SA VF ++S + W M+ GY + G EEA K+F M + VV
Sbjct: 142 IMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVV-- 199
Query: 178 DFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFS 237
+++G + K +E+ + F
Sbjct: 200 -----------------------SWTVMITG--------------FAKVKDLENARKYFD 222
Query: 238 EMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCS------- 290
M K VSW A++S Y+Q G + +RLF ML G++P++ T++ V+S CS
Sbjct: 223 RMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSL 282
Query: 291 -----------RTRL-----------------VEKGNQIFESMTKEHGIIPIQDHYSCII 322
R RL ++ +IF + + ++ ++ +I
Sbjct: 283 TRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVT----WNAMI 338
Query: 323 DLFSRAGRLEEARDFINQMLFRDSV 347
++R G + AR + M R+ V
Sbjct: 339 SGYTRIGDMSSARQLFDTMPKRNVV 363
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 141/230 (61%), Gaps = 2/230 (0%)
Query: 116 SALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV 175
++++D Y + V A +F+++ K+ V+WT M+ G QN EA + DM + G+
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLK 463
Query: 176 PDDFTLGSVISSCGNLASLEEGAQFHGI--ALVSGLISFVTVSNALVSLYGKCGSIEDCH 233
P + T ++SS G ++L++G H + + + + N+LVS+Y KCG+IED +
Sbjct: 464 PLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAY 523
Query: 234 RLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTR 293
+F++M KD VSW +++ S G A++ + LF+ ML G KP+ VTF+GVLS CS +
Sbjct: 524 EIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSG 583
Query: 294 LVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLF 343
L+ +G ++F++M + + I P DHY +IDL RAG+L+EA +FI+ + F
Sbjct: 584 LITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPF 633
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 146/309 (47%), Gaps = 8/309 (2%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
D YL G + + LF + ++D ++WT MISG QN L EA + +M L+
Sbjct: 408 DGYLEAGD---VSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKP 464
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTG--FKDNIYAGSALVDMYCKCRSVKSAET 133
T+ +L++ G L +G H I KT + ++ ++LV MY KC +++ A
Sbjct: 465 LNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYE 524
Query: 134 VFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLAS 193
+F +M K+ VSW +M++G +G +++A+ +F +M G P+ T V+S+C +
Sbjct: 525 IFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGL 584
Query: 194 LEEGAQ-FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF-KDEVSWTALV 251
+ G + F + + + +++ L G+ G +++ S + F D + AL+
Sbjct: 585 ITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALL 644
Query: 252 SAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGI 311
+ + + E L+ D V G +++C+ + + + + + M KE GI
Sbjct: 645 GLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGR-HDMEKEMRKEMGI 703
Query: 312 IPIQDHYSC 320
++ C
Sbjct: 704 KGVKKTPGC 712
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 168/389 (43%), Gaps = 77/389 (19%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
ED+ +LF +M ER+ +SW ++++G +NG +A VF M S D ++ +M+
Sbjct: 155 EDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKG- 209
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
+G + + + N+ +++V YC+ V+ A +F EM +N+VSWT
Sbjct: 210 ---YIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWT 266
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQK--YGVVPDDFTLGSVISSCGNLAS--LEEGAQFHGI 203
AM+ G+ N EA+ +F +M+K V P+ TL S+ +CG L G Q H
Sbjct: 267 AMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQ 326
Query: 204 AL----------------------VSGLI---------SFVTVS-NALVSLYGKCGSIED 231
+ SGLI SF S N +++ Y K G +E
Sbjct: 327 VISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLER 386
Query: 232 CHRLFSEM-TFKDEVSWTALVSAYSQFGKANETIRLFES--------------------- 269
LF + + D+VSWT+++ Y + G + LF+
Sbjct: 387 AETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNEL 446
Query: 270 ----------MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGII-PIQDHY 318
M+ GLKP T+ +LS T +++G I + K P
Sbjct: 447 FAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQ 506
Query: 319 SCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ ++ ++++ G +E+A + +M+ +D+V
Sbjct: 507 NSLVSMYAKCGAIEDAYEIFAKMVQKDTV 535
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 56/283 (19%)
Query: 30 SRQLFCDMRERDSIS----WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
+R L + +R SI+ WTS++S + G EA +F M
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER-------------- 106
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
NI +A++ Y KCR + A T+F+EM KNVVS
Sbjct: 107 -------------------------NIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVS 140
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
WT ML +G SE+AV++F +M + VV + + +I + +E+ Q
Sbjct: 141 WTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRN----GDMEKAKQVFDAMP 196
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
++S+ NA++ Y + +E+ LF +M+ K+ V+WT++V Y ++G E R
Sbjct: 197 SRDVVSW----NAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYR 252
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKE 308
LF M + V++ ++S + L + +F M K+
Sbjct: 253 LFCEMPERNI----VSWTAMISGFAWNELYREALMLFLEMKKD 291
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 159/315 (50%), Gaps = 31/315 (9%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+R +F M ++ ++W S++SG + L ++A + M E ++ D T+ S+ + G
Sbjct: 279 ARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLAS---G 335
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
L + +A I K K G A NVVSWTA+
Sbjct: 336 YATLGKPEKALDVIGKMKEK-----GVA-----------------------PNVVSWTAI 367
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
G +NG A+K+F MQ+ GV P+ T+ +++ G L+ L G + HG L L
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL 427
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFES 269
I V+ ALV +YGK G ++ +F + K SW ++ Y+ FG+ E I F
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSV 487
Query: 270 MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAG 329
ML G++PD +TF VLSVC + LV++G + F+ M +GIIP +H SC++DL R+G
Sbjct: 488 MLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSG 547
Query: 330 RLEEARDFINQMLFR 344
L+EA DFI M +
Sbjct: 548 YLDEAWDFIQTMSLK 562
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 150/348 (43%), Gaps = 36/348 (10%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
GR + + + +LF +M +RD ++W ++ ++G +A+++FREM+ + T
Sbjct: 34 GRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMV 93
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
+L C EG Q H Y+++ G + N+ ++L+ MY + ++ + VF M +
Sbjct: 94 KLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR 153
Query: 142 N-----------------------------------VVSWTAMLVGYGQNGYSEEAVKIF 166
N +V+W ++L GY G S++A+ +
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 167 CDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKC 226
MQ G+ P ++ S++ + L+ G HG L + L V V L+ +Y K
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 227 GSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVL 286
G + +F M K+ V+W +LVS S + L M G+KPD +T+ +
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA 333
Query: 287 SVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
S + EK + M KE G+ P ++ I S+ G A
Sbjct: 334 SGYATLGKPEKALDVIGKM-KEKGVAPNVVSWTAIFSGCSKNGNFRNA 380
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 127/249 (51%), Gaps = 13/249 (5%)
Query: 15 WDS----YLVLGRLLMIEDSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFR 66
W+S Y LG+ E + + M+E+ + +SWT++ SGC++NG R A+ VF
Sbjct: 329 WNSLASGYATLGK---PEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFI 385
Query: 67 EMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCR 126
+M+ E + + T ++L G + L G + H + ++ + Y +ALVDMY K
Sbjct: 386 KMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSG 445
Query: 127 SVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVIS 186
++SA +F + K++ SW ML+GY G EE + F M + G+ PD T SV+S
Sbjct: 446 DLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS 505
Query: 187 SCGNLASLEEGAQFHGIALVS-GLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DE 244
C N ++EG ++ + G+I + + +V L G+ G +++ M+ K D
Sbjct: 506 VCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDA 565
Query: 245 VSWTALVSA 253
W A +S+
Sbjct: 566 TIWGAFLSS 574
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 124/238 (52%), Gaps = 2/238 (0%)
Query: 96 GNQAHSYIIKTGFKD-NIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYG 154
G H +IK G + + SA + Y +C S+ A +F EM ++ ++W +++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 155 QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT 214
++G E+AV++F +MQ G D T+ ++ C N EG Q HG L GL S V+
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
+ N+L+ +Y + G +E ++F+ M ++ SW +++S+Y++ G ++ I L + M G
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 275 LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLE 332
LKPD VT+ +LS + L + + + M + G+ P S ++ + G L+
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPGHLK 242
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Query: 199 QFHGIALVSGLI------SFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVS 252
+F G+ + GLI S V +A + YG+C S+ ++LF EM +D+++W +V
Sbjct: 3 RFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVM 62
Query: 253 AYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGII 312
+ G + + LF M G K T + +L VCS +G QI + + G+
Sbjct: 63 VNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR-LGLE 121
Query: 313 PIQDHYSCIIDLFSRAGRLEEARDFINQMLFRD 345
+ +I ++SR G+LE +R N M R+
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 167/337 (49%), Gaps = 37/337 (10%)
Query: 45 WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYII 104
+T+MI G +G + + ++ M + D Y S+L AC L+ + H+ ++
Sbjct: 95 YTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQVL 150
Query: 105 KTGF--------------------------------KDNIYAGSALVDMYCKCRSVKSAE 132
K GF +D++ A + +++ Y +C +K A
Sbjct: 151 KLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHV-AATVMINCYSECGFIKEAL 209
Query: 133 TVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLA 192
+F+++ K+ V WTAM+ G +N +A+++F +MQ V ++FT V+S+C +L
Sbjct: 210 ELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLG 269
Query: 193 SLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVS 252
+LE G H + V NAL+++Y +CG I + R+F M KD +S+ ++S
Sbjct: 270 ALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMIS 329
Query: 253 AYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGII 312
+ G + E I F M+ G +P++VT + +L+ CS L++ G ++F SM + +
Sbjct: 330 GLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVE 389
Query: 313 PIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLM 349
P +HY CI+DL R GRLEEA FI + +M
Sbjct: 390 PQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIM 426
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 160/291 (54%), Gaps = 12/291 (4%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I+++ +LF D++ +D++ WT+MI G +N +A+++FREM+ E + +++T +L+A
Sbjct: 205 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSA 264
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C + AL+ G HS++ + + + G+AL++MY +C + A VF+ M K+V+S+
Sbjct: 265 CSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISY 324
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIAL 205
M+ G +G S EA+ F DM G P+ TL +++++C + L+ G + F+ +
Sbjct: 325 NTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKR 384
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFG--KANE 262
V + + +V L G+ G +E+ +R + + D + L+SA G + E
Sbjct: 385 VFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGE 444
Query: 263 TI--RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGI 311
I RLFES PD T++ + ++ + + ++ +I ESM ++ GI
Sbjct: 445 KIAKRLFESE-----NPDSGTYVLLSNLYASSGKWKESTEIRESM-RDSGI 489
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 41/301 (13%)
Query: 79 TFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM 138
T S+L +C + + H+ II+T + + L+ + SV A VF +
Sbjct: 31 TLISVLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 139 SYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGA 198
S NV +TAM+ G+ +G S + V ++ M V+PD++ + SV+ +C L+
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCR 143
Query: 199 QFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFG 258
+ H L G S +V ++ +YGK G + + ++F EM +D V+ T +++ YS+ G
Sbjct: 144 EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 203
Query: 259 -------------------------------KANETIRLFESMLTHGLKPDKVTFIGVLS 287
+ N+ + LF M + ++ T + VLS
Sbjct: 204 FIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLS 263
Query: 288 VCSRTRLVEKGNQIFESMTKEHGIIPIQDHY-SCIIDLFSRAGRLEEARDFINQMLFRDS 346
CS +E G + + E+ + + + + +I+++SR G + EAR M +D
Sbjct: 264 ACSDLGALELGRWVHSFV--ENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDV 321
Query: 347 V 347
+
Sbjct: 322 I 322
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 169/343 (49%), Gaps = 46/343 (13%)
Query: 2 FLLEVLWWICIRKWDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREA 61
F V+ W + K +YL +G ++ +R LF M++RD+ISW +MI G +A
Sbjct: 277 FCKNVVSWNSMIK--AYLKVGDVV---SARLLFDQMKDRDTISWNTMIDGYVHVSRMEDA 331
Query: 62 IDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDM 121
+F EM AHS+ + +V
Sbjct: 332 FALFSEM--------------------------PNRDAHSW-------------NMMVSG 352
Query: 122 YCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTL 181
Y +V+ A F++ K+ VSW +++ Y +N +EAV +F M G PD TL
Sbjct: 353 YASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTL 412
Query: 182 GSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF 241
S++S+ L +L G Q H I +V +I V V NAL+++Y +CG I + R+F EM
Sbjct: 413 TSLLSASTGLVNLRLGMQMHQI-VVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKL 471
Query: 242 KDEV-SWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQ 300
K EV +W A++ Y+ G A+E + LF SM ++G+ P +TF+ VL+ C+ LV++
Sbjct: 472 KREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKA 531
Query: 301 IFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLF 343
F SM + I P +HYS ++++ S G+ EEA I M F
Sbjct: 532 QFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPF 574
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 131/241 (54%), Gaps = 7/241 (2%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E +R F E+ ++SW S+I+ +N ++EA+D+F M E + D +T S+L+A
Sbjct: 359 VELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSA 418
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN-VVS 145
G++ L+ G Q H ++KT D + +AL+ MY +C + + +F EM K V++
Sbjct: 419 STGLVNLRLGMQMHQIVVKTVIPD-VPVHNALITMYSRCGEIMESRRIFDEMKLKREVIT 477
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG-AQFHGIA 204
W AM+ GY +G + EA+ +F M+ G+ P T SV+++C + ++E AQF +
Sbjct: 478 WNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMM 537
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSA---YSQFGKA 260
V + + ++LV++ G E+ + + M F+ D+ W AL+ A Y+ G A
Sbjct: 538 SVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLA 597
Query: 261 N 261
+
Sbjct: 598 H 598
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 166/380 (43%), Gaps = 64/380 (16%)
Query: 18 YLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQ 77
Y+ G + +E++R+LF +M RDS SW +MISG +N EA+ +F +M E +
Sbjct: 112 YVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP----ERNA 167
Query: 78 YTFGSMLTA-------------------------CGGVMALQEGNQAHSYI--------I 104
++ +M+T C V L + + +
Sbjct: 168 VSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSL 227
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVF---------------KEMSYKNVVSWTAM 149
+G +D +YA + L+ Y + V++A +F +E KNVVSW +M
Sbjct: 228 VSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSM 287
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
+ Y + G A +F M+ D + ++I +++ +E+ AL S +
Sbjct: 288 IKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDA-----FALFSEM 338
Query: 210 ISFVTVS-NALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
+ S N +VS Y G++E F + K VSW ++++AY + E + LF
Sbjct: 339 PNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFI 398
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
M G KPD T +LS + + G Q+ + + K +IP ++ +I ++SR
Sbjct: 399 RMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT--VIPDVPVHNALITMYSRC 456
Query: 329 GRLEEARDFINQMLFRDSVL 348
G + E+R ++M + V+
Sbjct: 457 GEIMESRRIFDEMKLKREVI 476
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 158/343 (46%), Gaps = 45/343 (13%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT- 85
I ++R +F + R++++W +MISG + R ++ R++ M + D T+ +M++
Sbjct: 56 IAEARDIFEKLEARNTVTWNTMISGYVK----RREMNQARKLFDVMPKRDVVTWNTMISG 111
Query: 86 --ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV 143
+CGG+ L+E A + +D+ ++ + ++ Y K R + A +F++M +N
Sbjct: 112 YVSCGGIRFLEE---ARKLFDEMPSRDS-FSWNTMISGYAKNRRIGEALLLFEKMPERNA 167
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGI 203
VSW+AM+ G+ QNG + AV +F M V D L ++++ L E A G
Sbjct: 168 VSWSAMITGFCQNGEVDSAVVLFRKMP----VKDSSPLCALVAGLIKNERLSEAAWVLGQ 223
Query: 204 --ALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT---------------FKDEVS 246
+LVSG V N L+ YG+ G +E LF ++ K+ VS
Sbjct: 224 YGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVS 283
Query: 247 WTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMT 306
W +++ AY + G LF+ M D +++ ++ +E +F M
Sbjct: 284 WNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEM- 338
Query: 307 KEHGIIPIQDHYS--CIIDLFSRAGRLEEARDFINQMLFRDSV 347
P +D +S ++ ++ G +E AR + + + +V
Sbjct: 339 ------PNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV 375
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 167/317 (52%), Gaps = 12/317 (3%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMA 92
+F ++ ++ ++W SMI+ L ++AI VF M S+ + D+ T ++ ++
Sbjct: 217 VFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSD 276
Query: 93 LQEGN------QAHSYIIKTGFKDNIYAGSALVDMYCK-CRSVKSAETVFKEMSY-KNVV 144
L Q HS +K+G +AL+ +Y + +F EMS+ +++V
Sbjct: 277 LVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIV 336
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
+W ++ + E A+ +F +++ + PD +T SV+ +C L + H
Sbjct: 337 AWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQV 395
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETI 264
+ G ++ ++N+L+ Y KCGS++ C R+F +M +D VSW +++ AYS G+ + +
Sbjct: 396 IKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSIL 455
Query: 265 RLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
+F+ M + PD TFI +LS CS VE+G +IF SM ++ +P +HY+C+ID+
Sbjct: 456 PVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDM 512
Query: 325 FSRAGRLEEARDFINQM 341
SRA R EA + I QM
Sbjct: 513 LSRAERFAEAEEVIKQM 529
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 160/329 (48%), Gaps = 18/329 (5%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+RQ+F M ER+ +SWT++I+G Q G +E +F M S +++T S+LT+C
Sbjct: 115 ARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSC-- 171
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCR---SVKSAETVFKEMSYKNVVSW 146
+ G Q H +K G +IY +A++ MY +C + A TVF+ + +KN+V+W
Sbjct: 172 --RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTW 229
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGA------QF 200
+M+ + ++A+ +F M GV D TL ++ SS + L Q
Sbjct: 230 NSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQL 289
Query: 201 HGIALVSGLISFVTVSNALVSLYGK-CGSIEDCHRLFSEMTF-KDEVSWTALVSAYSQFG 258
H + + SGL++ V+ AL+ +Y + DC++LF EM+ +D V+W +++A++ +
Sbjct: 290 HSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY- 348
Query: 259 KANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY 318
I LF + L PD TF VL C+ I + K G +
Sbjct: 349 DPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKG-GFLADTVLN 407
Query: 319 SCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ +I +++ G L+ + M RD V
Sbjct: 408 NSLIHAYAKCGSLDLCMRVFDDMDSRDVV 436
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 141/278 (50%), Gaps = 17/278 (6%)
Query: 59 REAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGF--KDNIYAGS 116
R A+ +F E+ Q + ++ AC L +G H +++ + N+ +
Sbjct: 43 RRAVSLFYSAPVEL--QSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILAN 100
Query: 117 ALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVP 176
L++MY KC ++ A VF M +NVVSWTA++ GY Q G +E +F M + P
Sbjct: 101 FLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH-CFP 159
Query: 177 DDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKC---GSIEDCH 233
++FTL SV++SC E G Q HG+AL GL + V+NA++S+YG+C + +
Sbjct: 160 NEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAW 215
Query: 234 RLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRT- 292
+F + FK+ V+W ++++A+ + I +F M + G+ D+ T + + S ++
Sbjct: 216 TVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSS 275
Query: 293 ----RLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
V K S+T + G++ + + +I ++S
Sbjct: 276 DLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYS 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
++F DM RD +SW SM+ + +G + VF++M + D TF ++L+AC
Sbjct: 425 RVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLSACSHAG 481
Query: 92 ALQEGNQAHSYIIKTGFKD-------NIYAGSALVDMYCKCRSVKSAETVFKEMSY-KNV 143
++EG + I ++ F+ N YA ++DM + AE V K+M +
Sbjct: 482 RVEEGLR----IFRSMFEKPETLPQLNHYA--CVIDMLSRAERFAEAEEVIKQMPMDPDA 535
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDD 178
V W A+L ++G + K+ D K V P +
Sbjct: 536 VVWIALLGSCRKHGNTRLG-KLAADKLKELVEPTN 569
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 177/347 (51%), Gaps = 5/347 (1%)
Query: 6 VLWWICIRKWDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVF 65
V W I + S LG + D +++ E ++W ++ GC + G + A++
Sbjct: 251 VSWNAIINCYTSEEKLGEAFKLLD--RMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCV 308
Query: 66 REMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKT-GFKDNI-YAGSALVDMYC 123
MR+ + + L AC + AL+ G H +I++ F +I ++L+ MY
Sbjct: 309 VGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYS 368
Query: 124 KCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGS 183
+C ++ A VF+++ ++ +W +++ G+ N SEE + +M G P+ TL S
Sbjct: 369 RCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLAS 428
Query: 184 VISSCGNLASLEEGAQFHGIALV-SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK 242
++ + +L+ G +FH L + + N+LV +Y K G I R+F M +
Sbjct: 429 ILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKR 488
Query: 243 DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIF 302
D+V++T+L+ Y + GK + F+ M G+KPD VT + VLS CS + LV +G+ +F
Sbjct: 489 DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLF 548
Query: 303 ESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLM 349
M GI +HYSC++DL+ RAG L++ARD + + + S M
Sbjct: 549 TKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAM 595
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 152/343 (44%), Gaps = 37/343 (10%)
Query: 42 SISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHS 101
+ W +I +N +E++ V++ M S+ + D++T+ S++ AC ++ G H
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 102 YIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEE 161
I + + N+Y +AL+ MY + V A +F MS ++ VSW A++ Y E
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 162 AVKIFCDMQKYGVVPDDFT------------------------------LGSV-----IS 186
A K+ M GV T +GSV +
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 187 SCGNLASLEEGAQFHGIALVSGLIS--FVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDE 244
+C ++ +L+ G FH + + S S V N+L+++Y +C + +F ++
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 245 VSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFES 304
+W +++S ++ ++ ET L + ML G P+ +T +L + +R ++ G +
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 305 MTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ + ++ ++D+++++G + A+ + M RD V
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKV 491
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 7/252 (2%)
Query: 52 CTQNGLHREAIDVFREMR--SEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFK 109
C +G EA F +R S E Y+ S+L+ C G G Q H++ I +G +
Sbjct: 56 CISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLE 115
Query: 110 DNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDM 169
+ LV Y + A+T+ + + + W ++ Y +N +E+V ++ M
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRM 175
Query: 170 QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSI 229
G+ D+FT SVI +C L G HG VS + V NAL+S+Y + G +
Sbjct: 176 MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKV 235
Query: 230 EDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVC 289
+ RLF M+ +D VSW A+++ Y+ K E +L + M G++ VT+ + C
Sbjct: 236 DVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC 295
Query: 290 SRTRLVEKGNQI 301
+E GN I
Sbjct: 296 -----LEAGNYI 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 11 CIRKWDSYL-VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR 69
C+ W+S + + + I ++++F MR+RD +++TS+I G + G A+ F++M
Sbjct: 458 CLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMD 517
Query: 70 SEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKT-GFKDNIYAGSALVDMYCKCRSV 128
++ D T ++L+AC ++EG+ + + G + + S +VD+YC+ +
Sbjct: 518 RSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYL 577
Query: 129 KSAETVFKEMSYKNVVSWTAMLV 151
A +F + Y+ + A L+
Sbjct: 578 DKARDIFHTIPYEPSSAMCATLL 600
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 177/347 (51%), Gaps = 5/347 (1%)
Query: 6 VLWWICIRKWDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVF 65
V W I + S LG + D +++ E ++W ++ GC + G + A++
Sbjct: 251 VSWNAIINCYTSEEKLGEAFKLLD--RMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCV 308
Query: 66 REMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKT-GFKDNI-YAGSALVDMYC 123
MR+ + + L AC + AL+ G H +I++ F +I ++L+ MY
Sbjct: 309 VGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYS 368
Query: 124 KCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGS 183
+C ++ A VF+++ ++ +W +++ G+ N SEE + +M G P+ TL S
Sbjct: 369 RCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLAS 428
Query: 184 VISSCGNLASLEEGAQFHGIALV-SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK 242
++ + +L+ G +FH L + + N+LV +Y K G I R+F M +
Sbjct: 429 ILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKR 488
Query: 243 DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIF 302
D+V++T+L+ Y + GK + F+ M G+KPD VT + VLS CS + LV +G+ +F
Sbjct: 489 DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLF 548
Query: 303 ESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLM 349
M GI +HYSC++DL+ RAG L++ARD + + + S M
Sbjct: 549 TKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAM 595
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 152/343 (44%), Gaps = 37/343 (10%)
Query: 42 SISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHS 101
+ W +I +N +E++ V++ M S+ + D++T+ S++ AC ++ G H
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 102 YIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEE 161
I + + N+Y +AL+ MY + V A +F MS ++ VSW A++ Y E
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 162 AVKIFCDMQKYGVVPDDFT------------------------------LGSV-----IS 186
A K+ M GV T +GSV +
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 187 SCGNLASLEEGAQFHGIALVSGLIS--FVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDE 244
+C ++ +L+ G FH + + S S V N+L+++Y +C + +F ++
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 245 VSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFES 304
+W +++S ++ ++ ET L + ML G P+ +T +L + +R ++ G +
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 305 MTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ + ++ ++D+++++G + A+ + M RD V
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKV 491
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 7/252 (2%)
Query: 52 CTQNGLHREAIDVFREMR--SEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFK 109
C +G EA F +R S E Y+ S+L+ C G G Q H++ I +G +
Sbjct: 56 CISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLE 115
Query: 110 DNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDM 169
+ LV Y + A+T+ + + + W ++ Y +N +E+V ++ M
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRM 175
Query: 170 QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSI 229
G+ D+FT SVI +C L G HG VS + V NAL+S+Y + G +
Sbjct: 176 MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKV 235
Query: 230 EDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVC 289
+ RLF M+ +D VSW A+++ Y+ K E +L + M G++ VT+ + C
Sbjct: 236 DVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC 295
Query: 290 SRTRLVEKGNQI 301
+E GN I
Sbjct: 296 -----LEAGNYI 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 11 CIRKWDSYL-VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR 69
C+ W+S + + + I ++++F MR+RD +++TS+I G + G A+ F++M
Sbjct: 458 CLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMD 517
Query: 70 SEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKT-GFKDNIYAGSALVDMYCKCRSV 128
++ D T ++L+AC ++EG+ + + G + + S +VD+YC+ +
Sbjct: 518 RSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYL 577
Query: 129 KSAETVFKEMSYKNVVSWTAMLV 151
A +F + Y+ + A L+
Sbjct: 578 DKARDIFHTIPYEPSSAMCATLL 600
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 146/278 (52%), Gaps = 36/278 (12%)
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRS-VKSAETVFKEMSYKNVVSWTAMLVGYGQNGY 158
H+++ K+GF + +AL+ Y S + A +F EMS +NVVSWTAML GY ++G
Sbjct: 149 HTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGD 208
Query: 159 SEEAVKIFCDMQKYGVV--------------------------------PDDFTLGSVIS 186
AV +F DM + V P++ T+ V+S
Sbjct: 209 ISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLS 268
Query: 187 SCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS 246
+C +L+ H A L S V VSN+LV LYGKCG++E+ +F + K +
Sbjct: 269 ACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTA 328
Query: 247 WTALVSAYSQFGKANETIRLFESMLT---HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFE 303
W ++++ ++ G++ E I +FE M+ + +KPD +TFIG+L+ C+ LV KG F+
Sbjct: 329 WNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFD 388
Query: 304 SMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
MT GI P +HY C+IDL RAGR +EA + ++ M
Sbjct: 389 LMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTM 426
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 126/234 (53%), Gaps = 8/234 (3%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEM-LETDQYTFGSMLT 85
I ++ LF DM ERD SW ++++ CTQNGL EA+ +FR M +E + ++ T +L+
Sbjct: 209 ISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLS 268
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
AC LQ H++ + +++ ++LVD+Y KC +++ A +VFK S K++ +
Sbjct: 269 ACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTA 328
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYG---VVPDDFTLGSVISSC--GNLASLEEGAQF 200
W +M+ + +G SEEA+ +F +M K + PD T ++++C G L S G F
Sbjct: 329 WNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRG-YF 387
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSA 253
+ G+ + L+ L G+ G ++ + S M K DE W +L++A
Sbjct: 388 DLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNA 441
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 11/249 (4%)
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCR--SVKSAETVFKEMSYKNVVSWTAML 150
L Q S++I +G + + L+ +C R ++ A +F S+ N + A+L
Sbjct: 37 LNHLKQVQSFMIVSGLSHSHFLCFKLLR-FCTLRLCNLSYARFIFDRFSFPNTHLYAAVL 95
Query: 151 VGYGQNG--YSEEAVKIFCDMQKYGVV-PDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
Y + ++ A F M V P+ F V+ S L+S H S
Sbjct: 96 TAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKS 155
Query: 208 GLISFVTVSNALVSLYGKCGS-IEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
G +V V AL+ Y S I +LF EM+ ++ VSWTA++S Y++ G + + L
Sbjct: 156 GFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVAL 215
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
FE M + D ++ +L+ C++ L + +F M E I P + C++ +
Sbjct: 216 FEDM----PERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACA 271
Query: 327 RAGRLEEAR 335
+ G L+ A+
Sbjct: 272 QTGTLQLAK 280
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 160/318 (50%), Gaps = 10/318 (3%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+R F +M R +SWT++ISG + G A +F +M D + +M+ G
Sbjct: 132 ARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMD---G 185
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
+ + A + K + + ++ YC + + +A +F M +N+VSW M
Sbjct: 186 FVKSGDMTSARRLFDEMTHK-TVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTM 244
Query: 150 LVGYGQNGYSEEAVKIFCDMQKY-GVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
+ GY QN +E +++F +MQ + PDD T+ SV+ + + +L G H
Sbjct: 245 IGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKK 304
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
L V V A++ +Y KCG IE R+F EM K SW A++ Y+ G A + LF
Sbjct: 305 LDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFV 364
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
+M+ KPD++T + V++ C+ LVE+G + F M +E G+ +HY C++DL RA
Sbjct: 365 TMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRA 422
Query: 329 GRLEEARDFINQMLFRDS 346
G L+EA D I M F +
Sbjct: 423 GSLKEAEDLITNMPFEPN 440
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 129/245 (52%), Gaps = 3/245 (1%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEM-LETDQYTFGSMLT 85
I+ +R+LF M ER+ +SW +MI G QN +E I +F+EM++ L+ D T S+L
Sbjct: 223 IDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLP 282
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
A AL G H ++ + + +A++DMY KC ++ A+ +F EM K V S
Sbjct: 283 AISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVAS 342
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W AM+ GY NG + A+ +F M PD+ T+ +VI++C + +EEG ++ +
Sbjct: 343 WNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMR 401
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDE-VSWTALVSAYSQFGKANETI 264
GL + + +V L G+ GS+++ L + M F+ + ++ +SA Q+
Sbjct: 402 EMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAE 461
Query: 265 RLFES 269
R+ +
Sbjct: 462 RILKK 466
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 152/325 (46%), Gaps = 31/325 (9%)
Query: 30 SRQLFCDMRERD-SISWTSMISGCTQNGLHREAIDVFREMRSEM-LETDQYTFGSMLTAC 87
+R+LF +RD S SMI + + ++ ++R++R E D +TF ++ +C
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
M + +G Q HS I + GF ++Y + +VDMY K + A F EM +++ VSWT
Sbjct: 89 SLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWT 148
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQK------YGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
A++ GY + G + A K+F M Y + D F ++S L +E
Sbjct: 149 ALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRL--FDE----- 201
Query: 202 GIALVSGLISFVTVSNALVSLYGKCG--SIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
++ TV ++G C I+ +LF M ++ VSW ++ Y Q +
Sbjct: 202 --------MTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQ 253
Query: 260 ANETIRLFESM-LTHGLKPDKVTFIGVLSVCSRTRLVEKGN--QIFESMTKEHGIIPIQD 316
E IRLF+ M T L PD VT + VL S T + G F K + +
Sbjct: 254 PQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKV-- 311
Query: 317 HYSCIIDLFSRAGRLEEARDFINQM 341
+ I+D++S+ G +E+A+ ++M
Sbjct: 312 -CTAILDMYSKCGEIEKAKRIFDEM 335
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 171/329 (51%), Gaps = 13/329 (3%)
Query: 16 DSYLVLGRLLMIEDSRQLF--CDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEML 73
D Y+ G +I +R+LF M ++ ISW SMISG Q + +D+ ++ ++M
Sbjct: 195 DGYVKCG---LIVSARELFDLMPMEMKNLISWNSMISGYAQTS---DGVDIASKLFADMP 248
Query: 74 ETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAET 133
E D ++ SM+ +++ + + ++ + ++D Y K V A+T
Sbjct: 249 EKDLISWNSMIDGYVKHGRIEDAKG----LFDVMPRRDVVTWATMIDGYAKLGFVHHAKT 304
Query: 134 VFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYG-VVPDDFTLGSVISSCGNLA 192
+F +M +++VV++ +M+ GY QN Y EA++IF DM+K ++PDD TL V+ + L
Sbjct: 305 LFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG 364
Query: 193 SLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVS 252
L + H + + AL+ +Y KCGSI+ +F + K W A++
Sbjct: 365 RLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIG 424
Query: 253 AYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGII 312
+ G + + LKPD +TF+GVL+ CS + LV++G FE M ++H I
Sbjct: 425 GLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIE 484
Query: 313 PIQDHYSCIIDLFSRAGRLEEARDFINQM 341
P HY C++D+ SR+G +E A++ I +M
Sbjct: 485 PRLQHYGCMVDILSRSGSIELAKNLIEEM 513
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 137/297 (46%), Gaps = 11/297 (3%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D W ++I + R+A+ + M + D+++ +L AC + ++ G Q H
Sbjct: 85 DPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIH 144
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSE 160
++ KTG +++ + L+ +Y KC + + +F M ++ VS+ +M+ GY + G
Sbjct: 145 GFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIV 204
Query: 161 EAVKIFCDMQKYGVVPDDFTLGSVISSCGNLAS-LEEGAQFHGIALVSGLISFVTVSNAL 219
A ++F M + + + S+IS + ++ ++ LIS+ N++
Sbjct: 205 SARELFDLMPME--MKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISW----NSM 258
Query: 220 VSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDK 279
+ Y K G IED LF M +D V+W ++ Y++ G + LF+ M D
Sbjct: 259 IDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR----DV 314
Query: 280 VTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARD 336
V + +++ + + + +IF M KE ++P ++ ++ GRL +A D
Sbjct: 315 VAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAID 371
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 130/285 (45%), Gaps = 19/285 (6%)
Query: 75 TDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRS---VKSA 131
T + + S + G + NQ H +IKTG N + +V + R A
Sbjct: 7 TMECSISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFA 66
Query: 132 ETVFKE-----MSYKNVVS---WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGS 183
VF E S+ V W A++ + +A+ + C M + GV D F+L
Sbjct: 67 RCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSL 126
Query: 184 VISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKD 243
V+ +C L ++ G Q HG +GL S + + N L+ LY KCG + ++F M +D
Sbjct: 127 VLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRD 186
Query: 244 EVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRL-VEKGNQIF 302
VS+ +++ Y + G LF+ M + +++ ++S ++T V+ +++F
Sbjct: 187 SVSYNSMIDGYVKCGLIVSARELFDLMPME--MKNLISWNSMISGYAQTSDGVDIASKLF 244
Query: 303 ESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
M ++ I ++ +ID + + GR+E+A+ + M RD V
Sbjct: 245 ADMPEKDLI-----SWNSMIDGYVKHGRIEDAKGLFDVMPRRDVV 284
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 158/323 (48%), Gaps = 40/323 (12%)
Query: 20 VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYT 79
V GR E +R++ M RD++SW S++S + GL EA +F EM +E+ +
Sbjct: 184 VYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFM 243
Query: 80 FGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS 139
YA + LV K A+ VF M
Sbjct: 244 ISG------------------------------YAAAGLV---------KEAKEVFDSMP 264
Query: 140 YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGV-VPDDFTLGSVISSCGNLASLEEGA 198
++VVSW AM+ Y G E +++F M PD FTL SV+S+C +L SL +G
Sbjct: 265 VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE 324
Query: 199 QFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFG 258
H G+ ++ ALV +Y KCG I+ +F + +D +W +++S S G
Sbjct: 325 WVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHG 384
Query: 259 KANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY 318
+ + +F M+ G KP+ +TFIGVLS C+ ++++ ++FE M+ + + P +HY
Sbjct: 385 LGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHY 444
Query: 319 SCIIDLFSRAGRLEEARDFINQM 341
C++DL R G++EEA + +N++
Sbjct: 445 GCMVDLLGRMGKIEEAEELVNEI 467
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 136/306 (44%), Gaps = 41/306 (13%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
+ + S+I + A+ VFREM + D+Y+F +L AC +EG Q H
Sbjct: 104 NGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIH 163
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSE 160
IK+G +++ + LV++Y + + A V M ++ VSW ++L Y + G +
Sbjct: 164 GLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVD 223
Query: 161 EAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALV 220
EA +F +M++ V +F ++
Sbjct: 224 EARALFDEMEERNVESWNF---------------------------------------MI 244
Query: 221 SLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGL-KPDK 279
S Y G +++ +F M +D VSW A+V+AY+ G NE + +F ML KPD
Sbjct: 245 SGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDG 304
Query: 280 VTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFIN 339
T + VLS C+ + +G + + K HGI + ++D++S+ G++++A +
Sbjct: 305 FTLVSVLSACASLGSLSQGEWVHVYIDK-HGIEIEGFLATALVDMYSKCGKIDKALEVFR 363
Query: 340 QMLFRD 345
RD
Sbjct: 364 ATSKRD 369
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 140/286 (48%), Gaps = 36/286 (12%)
Query: 26 MIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR---------------- 69
+++++R LF +M ER+ SW MISG GL +EA +VF M
Sbjct: 221 LVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAH 280
Query: 70 ----SEMLE------------TDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIY 113
+E+LE D +T S+L+AC + +L +G H YI K G + +
Sbjct: 281 VGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGF 340
Query: 114 AGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYG 173
+ALVDMY KC + A VF+ S ++V +W +++ +G ++A++IF +M G
Sbjct: 341 LATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEG 400
Query: 174 VVPDDFTLGSVISSCGNLASLEEGAQ-FHGIALVSGLISFVTVSNALVSLYGKCGSIEDC 232
P+ T V+S+C ++ L++ + F ++ V + + +V L G+ G IE+
Sbjct: 401 FKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEA 460
Query: 233 HRLFSEMTFKDEVS--WTALVSAYSQFGKANETIRLFESMLTHGLK 276
L +E+ DE S +L+ A +FG+ + R+ +L L+
Sbjct: 461 EELVNEIP-ADEASILLESLLGACKRFGQLEQAERIANRLLELNLR 505
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 132/256 (51%), Gaps = 16/256 (6%)
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYC---KCRSVKSAETVFKEMSYKNVVSWTA 148
+L E QAH++++KTG + ++ S LV + ++V A ++ + N + +
Sbjct: 51 SLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNS 110
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
++ Y + E A+ +F +M V PD ++ V+ +C EEG Q HG+ + SG
Sbjct: 111 VIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSG 170
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
L++ V V N LV++YG+ G E ++ M +D VSW +L+SAY + G +E LF+
Sbjct: 171 LVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFD 230
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQD--HYSCIIDLFS 326
M ++ ++ ++S + LV++ ++F+SM P++D ++ ++ ++
Sbjct: 231 EMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSM-------PVRDVVSWNAMVTAYA 279
Query: 327 RAGRLEEARDFINQML 342
G E + N+ML
Sbjct: 280 HVGCYNEVLEVFNKML 295
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Query: 183 SVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYG---KCGSIEDCHRLFSEM 239
++S SL E Q H L +GL ++ LV+ + ++ H + + +
Sbjct: 41 PILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRI 100
Query: 240 TFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGN 299
+ + +++ AY+ + +F ML + PDK +F VL C+ E+G
Sbjct: 101 GSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGR 160
Query: 300 QIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
QI K G++ + +++++ R+G E AR +++M RD+V
Sbjct: 161 QIHGLFIKS-GLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAV 207
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 130/226 (57%)
Query: 116 SALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV 175
S L+ Y + A+ +F+ M KNVVSWT ++ G+ Q G E A+ + +M + G+
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 176 PDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRL 235
P+++T+ +V+S+C +L G + HG L +G+ + ALV +Y KCG ++ +
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATV 350
Query: 236 FSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLV 295
FS M KD +SWTA++ ++ G+ ++ I+ F M+ G KPD+V F+ VL+ C + V
Sbjct: 351 FSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEV 410
Query: 296 EKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+ G F+SM ++ I P HY ++DL RAG+L EA + + M
Sbjct: 411 DLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENM 456
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 140/258 (54%), Gaps = 14/258 (5%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ ++QLF M E++ +SWT++I+G +Q G + AI + EM + L+ ++YT ++L+A
Sbjct: 243 LNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSA 302
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C AL G + H YI+ G K + G+ALVDMY KC + A TVF M++K+++SW
Sbjct: 303 CSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSW 362
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH----- 201
TAM+ G+ +G +A++ F M G PD+ +V+++C N + ++ G F
Sbjct: 363 TAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRL 422
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF-KDEVSWTALVSAYSQFGKA 260
A+ L +V V V L G+ G + + H L M D +W AL A KA
Sbjct: 423 DYAIEPTLKHYVLV----VDLLGRAGKLNEAHELVENMPINPDLTTWAALYRA----CKA 474
Query: 261 NETIRLFESMLTHGLKPD 278
++ R ES+ + L+ D
Sbjct: 475 HKGYRRAESVSQNLLELD 492
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 131/339 (38%), Gaps = 75/339 (22%)
Query: 75 TDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETV 134
D+ F S++ AC +L+ H+ I++ G + A LV +S + ++
Sbjct: 27 PDESHFISLIHACKDTASLR---HVHAQILRRGVLSSRVAAQ-LVSCSSLLKSPDYSLSI 82
Query: 135 FKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASL 194
F+ +N A++ G +N E +V+ F M + GV PD T V+ S L
Sbjct: 83 FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR 142
Query: 195 EEGAQFHGIALVSGLI--SFVTVSNALVSLYGKCGSIEDCHRLFSE-------------- 238
G H L + + SFV +S LV +Y K G ++ ++F E
Sbjct: 143 WLGRALHAATLKNFVDCDSFVRLS--LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWN 200
Query: 239 ---------------------MTFKDEVSWTALVSAYSQFGKANETIRLFE--------- 268
M ++ SW+ L+ Y G+ N +LFE
Sbjct: 201 VLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVS 260
Query: 269 ----------------------SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMT 306
ML GLKP++ T VLS CS++ + G +I
Sbjct: 261 WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRI-HGYI 319
Query: 307 KEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRD 345
++GI + + ++D++++ G L+ A + M +D
Sbjct: 320 LDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKD 358
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 168/327 (51%), Gaps = 6/327 (1%)
Query: 18 YLVLGRLLMIEDSRQLFCDMRER-DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETD 76
Y V G+ I D+R++F +M + D+++++++++G Q A+D+FR MR + +
Sbjct: 170 YCVCGK---ISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVN 226
Query: 77 QYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK 136
T S L+A + L AH IK G +++ +AL+ MY K + SA +F
Sbjct: 227 VSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFD 286
Query: 137 EMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE 196
K+VV+W M+ Y + G EE V + M+ + P+ T ++SSC +
Sbjct: 287 CAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFV 346
Query: 197 GAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQ 256
G + + + ALV +Y K G +E +F+ M KD SWTA++S Y
Sbjct: 347 GRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGA 406
Query: 257 FGKANETIRLFESMLTHG--LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPI 314
G A E + LF M ++P+++TF+ VL+ CS LV +G + F+ M + + P
Sbjct: 407 HGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPK 466
Query: 315 QDHYSCIIDLFSRAGRLEEARDFINQM 341
+HY C++DL RAG+LEEA + I +
Sbjct: 467 VEHYGCVVDLLGRAGQLEEAYELIRNL 493
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 159/328 (48%), Gaps = 2/328 (0%)
Query: 19 LVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQY 78
L +L I + +F + + + +MI G + + A VF ++R++ L D++
Sbjct: 67 LAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRF 126
Query: 79 TFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM 138
+F + L +C + + G H +++GF +AL+ YC C + A VF EM
Sbjct: 127 SFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEM 186
Query: 139 SYK-NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG 197
+ V+++ ++ GY Q A+ +F M+K VV + TL S +S+ +L L
Sbjct: 187 PQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGA 246
Query: 198 AQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQF 257
H + + GL + + AL+ +YGK G I R+F KD V+W ++ Y++
Sbjct: 247 ESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKT 306
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH 317
G E + L M +KP+ TF+G+LS C+ + G + + + +E I
Sbjct: 307 GLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVAD-LLEEERIALDAIL 365
Query: 318 YSCIIDLFSRAGRLEEARDFINQMLFRD 345
+ ++D++++ G LE+A + N+M +D
Sbjct: 366 GTALVDMYAKVGLLEKAVEIFNRMKDKD 393
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 124/285 (43%), Gaps = 42/285 (14%)
Query: 95 EGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYG 154
E ++ H Y++KTG + +A S L+ + ++ A ++F+ +S N+ + M+ GY
Sbjct: 43 EVSRIHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYS 101
Query: 155 QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT 214
+ E A +F ++ G+ D F+ + + SC + G HGIAL SG + F
Sbjct: 102 ISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTD 161
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFGKANETIRLFESMLTH 273
+ NAL+ Y CG I D ++F EM D V+++ L++ Y Q K + LF M
Sbjct: 162 LRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKS 221
Query: 274 GLKPDKVTFIGVLSVCS-----------------------------------RTRLVEKG 298
+ + T + LS S +T +
Sbjct: 222 EVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSA 281
Query: 299 NQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLF 343
+IF+ ++ + ++C+ID +++ G LEE + QM +
Sbjct: 282 RRIFDCAIRKDVVT-----WNCMIDQYAKTGLLEECVWLLRQMKY 321
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 172/344 (50%), Gaps = 41/344 (11%)
Query: 37 MRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEG 96
+ E+D++ WT+++S ++ GL ++ +F EMR + +E D + + C + L
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 97 NQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS----------- 145
Q H +K G ++ +AL+DMY KC V + +F+E+ K+VVS
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 146 --------------------WTAMLVGYGQNGYSEEAVKIFCDMQ-KYGVVPDDFTLGSV 184
WT M+ GY G++ E +++ +M + G + TL S+
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 185 ISSCGNLASLEEGAQFHGIALVSGLI-------SFVTVSNALVSLYGKCGSIEDCHRLFS 237
+S+C +L G H AL ++ V V ALV +Y KCG+I+ +F
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 238 EMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEK 297
M ++ V+W AL S + GK I +F M+ +KPD +TF VLS CS + +V++
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDE 369
Query: 298 GNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
G + F S+ + +G+ P DHY+C++DL RAG +EEA + +M
Sbjct: 370 GWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREM 412
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 128/255 (50%), Gaps = 12/255 (4%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQY-TFGSMLT 85
+E R++F +M ER++++WT M++G G RE +++ EM + T SML+
Sbjct: 193 LERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLS 252
Query: 86 ACGGVMALQEGNQAHSYIIKTGFK-------DNIYAGSALVDMYCKCRSVKSAETVFKEM 138
AC L G H Y +K D++ G+ALVDMY KC ++ S+ VF+ M
Sbjct: 253 ACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLM 312
Query: 139 SYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGA 198
+NVV+W A+ G +G + +F M + V PDD T +V+S+C + ++EG
Sbjct: 313 RKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGW 371
Query: 199 Q-FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF-KDEVSWTALVSAYSQ 256
+ FH + GL V +V L G+ G IE+ L EM +EV +L+ + S
Sbjct: 372 RCFHSLRFY-GLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSV 430
Query: 257 FGKANETIRLFESML 271
GK R+ ++
Sbjct: 431 HGKVEIAERIKRELI 445
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 139/309 (44%), Gaps = 46/309 (14%)
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFK--DNIYAGSALVDMYCKCRSVKSAETVFKE--M 138
+L C L+ G + H+ + +G K Y +AL Y + +A+ +F E +
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 139 SYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGA 198
S K+ V WT +L + + G ++K+F +M++ V DD ++ + C L L
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 199 QFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFS--------------------- 237
Q HG+A+ G+++ V V NAL+ +YGKCG + + R+F
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 238 ----------EMTFKDEVSWTALVSAYSQFGKANETIRLFESML---THGLKPDKVTFIG 284
EM ++ V+WT +V+ Y G E + L M+ HGL + VT
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGL--NFVTLCS 249
Query: 285 VLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY------SCIIDLFSRAGRLEEARDFI 338
+LS C+++ + G + K+ ++ + Y + ++D++++ G ++ + +
Sbjct: 250 MLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF 309
Query: 339 NQMLFRDSV 347
M R+ V
Sbjct: 310 RLMRKRNVV 318
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 155/303 (51%), Gaps = 9/303 (2%)
Query: 53 TQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACG-GVMALQEGNQAHSYIIK--TGFK 109
TQ L D RS + +++T+ S+ A G + G H++++K
Sbjct: 88 TQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVN 147
Query: 110 DNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQN---GYSEEAVKIF 166
+ + +ALV Y C ++ A ++F+ + ++ +W +L Y + EE + +F
Sbjct: 148 HDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLF 207
Query: 167 CDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKC 226
MQ V P++ +L ++I SC NL G H L + L V +L+ LY KC
Sbjct: 208 MRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKC 264
Query: 227 GSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVL 286
G + ++F EM+ +D + A++ + G E I L++S+++ GL PD TF+ +
Sbjct: 265 GCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTI 324
Query: 287 SVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDS 346
S CS + LV++G QIF SM +GI P +HY C++DL R+GRLEEA + I +M + +
Sbjct: 325 SACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPN 384
Query: 347 VLM 349
+
Sbjct: 385 ATL 387
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 119/239 (49%), Gaps = 12/239 (5%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFRE-----MRSEMLETDQYTFG 81
+ ++R LF +RE D +W ++++ + E ID E MR ++ ++ +
Sbjct: 166 LREARSLFERIREPDLATWNTLLAAYANS----EEIDSDEEVLLLFMRMQV-RPNELSLV 220
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
+++ +C + G AH Y++K N + G++L+D+Y KC + A VF EMS +
Sbjct: 221 ALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQR 280
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-F 200
+V + AM+ G +G+ +E ++++ + G+VPD T IS+C + ++EG Q F
Sbjct: 281 DVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIF 340
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSAYSQFG 258
+ + V G+ V LV L G+ G +E+ +M K + W + + + G
Sbjct: 341 NSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHG 399
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 116/271 (42%), Gaps = 27/271 (9%)
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCK-CRSVKSAETVFKEMSYKNVVSWTAML 150
+LQ Q H+ II G + Y S L+ + C S A ++ +++ +V + ++
Sbjct: 21 SLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSY--ALSILRQIPNPSVFLYNTLI 78
Query: 151 VGYGQNGYSEEAVKIFC------DMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
N S + F + V P++FT S+ + G + HG A
Sbjct: 79 SSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASG----FDAQWHRHGRA 134
Query: 205 LVSGLISFVTVSN-------ALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYS-- 255
L + ++ F+ N ALV Y CG + + LF + D +W L++AY+
Sbjct: 135 LHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANS 194
Query: 256 -QFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPI 314
+ E + LF M ++P++++ + ++ C+ +G + K + +
Sbjct: 195 EEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLN- 250
Query: 315 QDHYSCIIDLFSRAGRLEEARDFINQMLFRD 345
Q + +IDL+S+ G L AR ++M RD
Sbjct: 251 QFVGTSLIDLYSKCGCLSFARKVFDEMSQRD 281
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 149/264 (56%), Gaps = 9/264 (3%)
Query: 95 EGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK-NVVSWTAMLVGY 153
+G Q H+ + K GF I ++LV Y V A VF E K N+V WTAM+ Y
Sbjct: 83 DGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAY 142
Query: 154 GQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG--IALVSGLIS 211
+N S EA+++F M+ + D + +S+C +L +++ G + + I L
Sbjct: 143 TENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAM 202
Query: 212 FVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESML 271
+T+ N+L+++Y K G E +LF E KD ++T+++ Y+ G+A E++ LF+ M
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262
Query: 272 THG------LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
T + P+ VTFIGVL CS + LVE+G + F+SM ++ + P + H+ C++DLF
Sbjct: 263 TIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLF 322
Query: 326 SRAGRLEEARDFINQMLFRDSVLM 349
R+G L++A +FINQM + + ++
Sbjct: 323 CRSGHLKDAHEFINQMPIKPNTVI 346
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 128/243 (52%), Gaps = 11/243 (4%)
Query: 27 IEDSRQLFCDMRERDSIS-WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
++ +RQ+F + E+ +I WT+MIS T+N EAI++F+ M +E +E D L+
Sbjct: 116 VDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALS 175
Query: 86 ACGGVMALQEGNQAHSYIIKTGFK--DNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV 143
AC + A+Q G + +S IK + ++ ++L++MY K + A +F E K+V
Sbjct: 176 ACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDV 235
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDM------QKYGVVPDDFTLGSVISSCGNLASLEEG 197
++T+M+ GY NG ++E++++F M Q + P+D T V+ +C + +EEG
Sbjct: 236 TTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEG 295
Query: 198 AQ-FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYS 255
+ F + + L +V L+ + G ++D H ++M K + V W L+ A S
Sbjct: 296 KRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACS 355
Query: 256 QFG 258
G
Sbjct: 356 LHG 358
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 159 SEEAVKIFCDMQ-KYGVVP---DDFT-LGSVISSCGNLASLEEGAQFHGIALVSGLISFV 213
S E +K D + ++ P D F+ L ++ S AS +G Q H + G + +
Sbjct: 41 SGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVI 100
Query: 214 TVSNALVSLYGKCGSIEDCHRLFSEMTFKDE-VSWTALVSAYSQFGKANETIRLFESMLT 272
+ +LV Y G ++ ++F E K V WTA++SAY++ + E I LF+ M
Sbjct: 101 QIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEA 160
Query: 273 HGLKPDKVTFIGVLSVCSRTRLVEKGNQIF-ESMTKEHGIIPIQDHYSCIIDLFSRAGRL 331
++ D V LS C+ V+ G +I+ S+ ++ + + +++++ ++G
Sbjct: 161 EKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGET 220
Query: 332 EEARDFINQMLFRD 345
E+AR ++ + +D
Sbjct: 221 EKARKLFDESMRKD 234
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 176/358 (49%), Gaps = 41/358 (11%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+R++F +M ER+ +W +MI G NG A +F E+ + + T+ M+ G
Sbjct: 100 ARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEIS---VCRNTVTWIEMIKGYGK 156
Query: 90 VMALQEGNQAHSYIIKTGFK-DNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN------ 142
+ ++ +A + F+ N+ A S ++ +Y R ++ A F+++ KN
Sbjct: 157 RIEIE---KARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSL 213
Query: 143 -------------------------VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPD 177
+V W ++ GY QNGYS++A+ F +MQ G PD
Sbjct: 214 MMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPD 273
Query: 178 DFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFS 237
T+ S++S+C L+ G + H + G+ VSNAL+ +Y KCG +E+ +F
Sbjct: 274 AVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFE 333
Query: 238 EMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEK 297
++ + +++S + GK E + +F +M + LKPD++TFI VL+ C + +
Sbjct: 334 SISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLME 393
Query: 298 GNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFR--DSVLMQLVG 353
G +IF M K + P H+ C+I L R+G+L+EA + +M + D+VL L+G
Sbjct: 394 GLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLG 450
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 117/220 (53%)
Query: 23 RLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGS 82
R+ + ++R +F + RD + W ++I+G QNG +AID F M+ E E D T S
Sbjct: 220 RIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSS 279
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN 142
+L+AC L G + HS I G + N + +AL+DMY KC +++A +VF+ +S ++
Sbjct: 280 ILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRS 339
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
V +M+ +G +EA+++F M+ + PD+ T +V+++C + L EG +
Sbjct: 340 VACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFS 399
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK 242
+ V L+ L G+ G +++ +RL EM K
Sbjct: 400 EMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVK 439
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 34/292 (11%)
Query: 83 MLTACGGVMA-LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
+L AC V+ + G HS IK G ++ GS+L+ MY KC V SA VF EM +
Sbjct: 51 ILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER 110
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
NV +W AM+ GY NG + A +F ++ V + T +I G +E+ +
Sbjct: 111 NVATWNAMIGGYMSNGDAVLASGLF---EEISVCRNTVTWIEMIKGYGKRIEIEKARELF 167
Query: 202 -----------------GIAL-------VSGLISFVTVSNALV-----SLYGKCGSIEDC 232
G+ + + NA V S Y + G + +
Sbjct: 168 ERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEA 227
Query: 233 HRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRT 292
+F + +D V W L++ Y+Q G +++ I F +M G +PD VT +LS C+++
Sbjct: 228 RAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQS 287
Query: 293 RLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFR 344
++ G ++ S+ GI Q + +ID++++ G LE A + R
Sbjct: 288 GRLDVGREV-HSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR 338
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 157/323 (48%), Gaps = 45/323 (13%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
+LF D + ++W+SM SG + G EA+ +F EM + DQ + M+T C
Sbjct: 168 ELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGC---- 219
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLV 151
KC+ + SA +F + K+VV+W AM+
Sbjct: 220 -------------------------------LKCKEMDSARELFDRFTEKDVVTWNAMIS 248
Query: 152 GYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLIS 211
GY GY +EA+ IF +M+ G PD T+ S++S+C L LE G + H L + +S
Sbjct: 249 GYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVS 308
Query: 212 F-----VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
+ NAL+ +Y KCGSI+ +F + +D +W L+ + A +I +
Sbjct: 309 SSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLA-LHHAEGSIEM 367
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
FE M + P++VTFIGV+ CS + V++G + F M + I P HY C++D+
Sbjct: 368 FEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLG 427
Query: 327 RAGRLEEARDFINQMLFRDSVLM 349
RAG+LEEA F+ M + ++
Sbjct: 428 RAGQLEEAFMFVESMKIEPNAIV 450
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 129/239 (53%), Gaps = 8/239 (3%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++ +R+LF E+D ++W +MISG G +EA+ +F+EMR D T S+L+A
Sbjct: 225 MDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSA 284
Query: 87 CGGVMALQEGNQAHSYIIKTG-FKDNIYAGS----ALVDMYCKCRSVKSAETVFKEMSYK 141
C + L+ G + H YI++T +IY G+ AL+DMY KC S+ A VF+ + +
Sbjct: 285 CAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR 344
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
++ +W ++VG + ++E ++++F +MQ+ V P++ T VI +C + ++EG ++
Sbjct: 345 DLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYF 403
Query: 202 GIAL-VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFG 258
+ + + + +V + G+ G +E+ M + + + W L+ A +G
Sbjct: 404 SLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYG 462
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 137/320 (42%), Gaps = 43/320 (13%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+ +LF ++ + D ++ G Q+ + + ++ EM + D+YTF +L AC
Sbjct: 65 AHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSK 124
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
+ G H +++ GF N Y +AL+ + C + A +F + + + V+W++M
Sbjct: 125 LEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSM 184
Query: 150 LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
GY + G +EA+++F +M D +I+ C
Sbjct: 185 TSGYAKRGKIDEAMRLFDEMP----YKDQVAWNVMITGC--------------------- 219
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFES 269
KC ++ LF T KD V+W A++S Y G E + +F+
Sbjct: 220 --------------LKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKE 265
Query: 270 MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQ----IFESMTKEHGIIPIQDHYSCIIDLF 325
M G PD VT + +LS C+ +E G + I E+ + I ++ +ID++
Sbjct: 266 MRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMY 325
Query: 326 SRAGRLEEARDFINQMLFRD 345
++ G ++ A + + RD
Sbjct: 326 AKCGSIDRAIEVFRGVKDRD 345
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 124/264 (46%), Gaps = 20/264 (7%)
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSV----KSAETVFKEMSYKN 142
C + L+ Q H+ ++ G N+ L+ Y SV K A +F E+ +
Sbjct: 22 CKNIRTLK---QIHASMVVNGLMSNLSVVGELI--YSASLSVPGALKYAHKLFDEIPKPD 76
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
V +L G Q+ E+ V ++ +M+K GV PD +T V+ +C L G FHG
Sbjct: 77 VSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHG 136
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
+ G + V NAL+ + CG + LF + +V+W+++ S Y++ GK +E
Sbjct: 137 KVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDE 196
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
+RLF+ M D+V + +++ C + + ++ ++F+ T++ + ++ +I
Sbjct: 197 AMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVT-----WNAMI 247
Query: 323 DLFSRAGRLEEARDFINQMLFRDS 346
+ G +EA +M RD+
Sbjct: 248 SGYVNCGYPKEALGIFKEM--RDA 269
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 169/343 (49%), Gaps = 36/343 (10%)
Query: 34 FCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMAL 93
F M +D ISW +++ + + +++ + +E + D T S+L C V +
Sbjct: 389 FSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGI 448
Query: 94 QEGNQAHSYIIKTGF---KDNIYAGSALVDMYCKCRSVK--------------------- 129
+ + H Y +K G ++ G+AL+D Y KC +V+
Sbjct: 449 GKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSL 508
Query: 130 -----------SAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDD 178
A+ +F EMS ++ +W+ M+ Y ++ EA+ +F ++Q G+ P+
Sbjct: 509 LSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNT 568
Query: 179 FTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSE 238
T+ +++ C LASL Q HG ++ G + + + L+ +Y KCGS++ + +F
Sbjct: 569 VTIMNLLPVCAQLASLHLVRQCHGY-IIRGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQS 627
Query: 239 MTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKG 298
+D V +TA+V+ Y+ G+ E + ++ M +KPD V +L+ C L++ G
Sbjct: 628 DARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDG 687
Query: 299 NQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
QI++S+ HG+ P + Y+C +DL +R GRL++A F+ QM
Sbjct: 688 LQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQM 730
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 158/315 (50%), Gaps = 8/315 (2%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR-SEMLETDQYTFGSMLT 85
++D +++F M D + W +++G + + RE + F+ M ++ + TF +L
Sbjct: 72 MDDCQKMFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTFAIVLP 130
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSV-KSAETVFKEMSYKNVV 144
C + G HSYIIK G + + G+ALV MY K + A T F ++ K+VV
Sbjct: 131 LCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVV 190
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNL---ASLEEGAQFH 201
SW A++ G+ +N +A + FC M K P+ T+ +V+ C ++ + G Q H
Sbjct: 191 SWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIH 250
Query: 202 G-IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKA 260
+ S L + V V N+LVS Y + G IE+ LF+ M KD VSW +++ Y+ +
Sbjct: 251 SYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEW 310
Query: 261 NETIRLFESMLTHG-LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYS 319
+ +LF +++ G + PD VT I +L VC++ + G +I + + ++ +
Sbjct: 311 FKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGN 370
Query: 320 CIIDLFSRAGRLEEA 334
+I ++R G A
Sbjct: 371 ALISFYARFGDTSAA 385
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 161/320 (50%), Gaps = 10/320 (3%)
Query: 25 LMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSML 84
+ D+ F + ++D +SW ++I+G ++N + +A F M E E + T ++L
Sbjct: 172 FIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVL 231
Query: 85 TACGGV---MALQEGNQAHSYII-KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY 140
C + +A + G Q HSY++ ++ + +++ ++LV Y + ++ A ++F M
Sbjct: 232 PVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGS 291
Query: 141 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYG-VVPDDFTLGSVISSCGNLASLEEGAQ 199
K++VSW ++ GY N +A ++F ++ G V PD T+ S++ C L L G +
Sbjct: 292 KDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKE 351
Query: 200 FHGIALV-SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFG 258
H L S L+ +V NAL+S Y + G + FS M+ KD +SW A++ A++
Sbjct: 352 IHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSP 411
Query: 259 KANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY 318
K + + L +L + D VT + +L C + + K ++ K G++ ++
Sbjct: 412 KQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKA-GLLHDEEEP 470
Query: 319 ---SCIIDLFSRAGRLEEAR 335
+ ++D +++ G +E A
Sbjct: 471 KLGNALLDAYAKCGNVEYAH 490
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 173/383 (45%), Gaps = 44/383 (11%)
Query: 4 LEVLWWICIRKWDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAID 63
L+ ++C YL +GR IE++ LF M +D +SW +I+G N +A
Sbjct: 259 LQTHVFVCNSLVSFYLRVGR---IEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQ 315
Query: 64 VFREMRSEM-LETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFK-DNIYAGSALVDM 121
+F + + + D T S+L C + L G + HSYI++ + ++ G+AL+
Sbjct: 316 LFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISF 375
Query: 122 YCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTL 181
Y + +A F MS K+++SW A+L + + + + + + + D T+
Sbjct: 376 YARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTI 435
Query: 182 GSVISSCGNLASLEEGAQFHGIALVSGLI---SFVTVSNALVSLYGKCGSIEDCHR---- 234
S++ C N+ + + + HG ++ +GL+ + NAL+ Y KCG++E H+
Sbjct: 436 LSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLG 495
Query: 235 ----------------------------LFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
LF+EM+ D +W+ +V Y++ NE I +
Sbjct: 496 LSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGV 555
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEH-GIIPIQDHYSCIIDLF 325
F + G++P+ VT + +L VC++ + Q + + G I ++ ++D++
Sbjct: 556 FREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLK---GTLLDVY 612
Query: 326 SRAGRLEEARDFINQMLFRDSVL 348
++ G L+ A RD V+
Sbjct: 613 AKCGSLKHAYSVFQSDARRDLVM 635
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 125/234 (53%), Gaps = 3/234 (1%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
+D++ LF +M D +W+ M+ ++ EAI VFRE+++ + + T ++L C
Sbjct: 519 DDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVC 578
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWT 147
+ +L Q H YII+ G D G+ L+D+Y KC S+K A +VF+ + +++V +T
Sbjct: 579 AQLASLHLVRQCHGYIIRGGLGDIRLKGT-LLDVYAKCGSLKHAYSVFQSDARRDLVMFT 637
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIALV 206
AM+ GY +G +EA+ I+ M + + PD + +++++C + +++G Q + I V
Sbjct: 638 AMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTV 697
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSAYSQFGK 259
G+ + V L + G ++D + ++M + + W L+ A + + +
Sbjct: 698 HGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNR 751
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 130/305 (42%), Gaps = 14/305 (4%)
Query: 56 GLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAG 115
G R+ + FR + TD F ++ AC V L G H + K G
Sbjct: 2 GPLRQFVQNFRLLSG--FGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVS 59
Query: 116 SALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQ-KYGV 174
++++MY KCR + + +F++M + V W +L G + E ++ F M
Sbjct: 60 KSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEP 118
Query: 175 VPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSI-EDCH 233
P T V+ C L G H + +GL V NALVS+Y K G I D +
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAY 178
Query: 234 RLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCS--- 290
F + KD VSW A+++ +S+ + R F ML +P+ T VL VC+
Sbjct: 179 TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMD 238
Query: 291 RTRLVEKGNQIFESMTKEHGIIPIQDH-YSC--IIDLFSRAGRLEEARDFINQMLFRDSV 347
+ G QI + + +Q H + C ++ + R GR+EEA +M +D V
Sbjct: 239 KNIACRSGRQIHSYVVQRSW---LQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLV 295
Query: 348 LMQLV 352
+V
Sbjct: 296 SWNVV 300
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 164/319 (51%), Gaps = 39/319 (12%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ ++R++F D+ E+D + + +MISG N EA+++ ++M+
Sbjct: 168 VGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMK----------------- 210
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM---SYK-N 142
G K ++ +AL+ + R+ + + + M YK +
Sbjct: 211 ------------------LLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPD 252
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
VVSWT+++ G N +E+A F M +G+ P+ T+ +++ +C LA ++ G + HG
Sbjct: 253 VVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHG 312
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
++V+GL V +AL+ +YGKCG I + LF + K V++ +++ Y+ G A++
Sbjct: 313 YSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADK 372
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
+ LF+ M G K D +TF +L+ CS L + G +F M ++ I+P +HY+C++
Sbjct: 373 AVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMV 432
Query: 323 DLFSRAGRLEEARDFINQM 341
DL RAG+L EA + I M
Sbjct: 433 DLLGRAGKLVEAYEMIKAM 451
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 167/335 (49%), Gaps = 52/335 (15%)
Query: 18 YLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQ 77
Y+ G++L D+R++F +M +RD MI C +NG ++E++D FREM + L+ D
Sbjct: 61 YVECGKVL---DARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDA 117
Query: 78 YTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE 137
+ S+L A ++ + G H ++K ++ + + S+L+DMY K V +A VF +
Sbjct: 118 FIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSD 177
Query: 138 MSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG 197
+ +++V + AM+ GY N ++EA+ + DM+ G+ PD T ++IS ++ + E+
Sbjct: 178 LGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEK- 236
Query: 198 AQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQF 257
VS ++ + + D ++ D VSWT+++S
Sbjct: 237 --------VSEILELMCL---------------DGYK-------PDVVSWTSIISGLVHN 266
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHG---IIPI 314
+ + F+ MLTHGL P+ T I +L C+ ++ G +I HG + +
Sbjct: 267 FQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEI-------HGYSVVTGL 319
Query: 315 QDH---YSCIIDLFSRAGRLEEARDFINQMLFRDS 346
+DH S ++D++ + G + EA +LFR +
Sbjct: 320 EDHGFVRSALLDMYGKCGFISEA-----MILFRKT 349
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 124/247 (50%), Gaps = 1/247 (0%)
Query: 96 GNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQ 155
G H++++ +G + LV Y +C V A VF EM +++ M+ +
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 156 NGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTV 215
NGY +E++ F +M K G+ D F + S++ + NL E G H + L S +
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFI 154
Query: 216 SNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGL 275
++L+ +Y K G + + ++FS++ +D V + A++S Y+ +A+E + L + M G+
Sbjct: 155 VSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGI 214
Query: 276 KPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEAR 335
KPD +T+ ++S S R EK ++I E M + G P ++ II + E+A
Sbjct: 215 KPDVITWNALISGFSHMRNEEKVSEILELMCLD-GYKPDVVSWTSIISGLVHNFQNEKAF 273
Query: 336 DFINQML 342
D QML
Sbjct: 274 DAFKQML 280
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 119/231 (51%), Gaps = 3/231 (1%)
Query: 32 QLFC-DMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGV 90
+L C D + D +SWTS+ISG N + +A D F++M + L + T ++L AC +
Sbjct: 242 ELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTL 301
Query: 91 MALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAML 150
++ G + H Y + TG +D+ + SAL+DMY KC + A +F++ K V++ +M+
Sbjct: 302 AYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMI 361
Query: 151 VGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIALVSGL 209
Y +G +++AV++F M+ G D T +++++C + + G F + +
Sbjct: 362 FCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRI 421
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFGK 259
+ + +V L G+ G + + + + M + D W AL++A G
Sbjct: 422 VPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGN 472
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 170/350 (48%), Gaps = 33/350 (9%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM--RSEMLETDQYTFGSMLTACGGV 90
+F + ++ W ++I G +++ AI +F +M S ++ + T+ S+ A G +
Sbjct: 80 VFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRL 139
Query: 91 MALQEGNQAHSYIIKTGFKDNIYAGSALVDMY---------------------------- 122
++G Q H +IK G +D+ + + ++ MY
Sbjct: 140 GQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMI 199
Query: 123 ---CKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDF 179
KC + A+ +F EM +N VSW +M+ G+ +NG ++A+ +F +MQ+ V PD F
Sbjct: 200 MGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF 259
Query: 180 TLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEM 239
T+ S++++C L + E+G H + + V AL+ +Y KCG IE+ +F
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECA 319
Query: 240 TFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGN 299
K W +++ + G + LF + GL+PD V+FIGVL+ C+ + V + +
Sbjct: 320 PKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRAD 379
Query: 300 QIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLM 349
+ F M +++ I P HY+ ++++ AG LEEA I M + ++
Sbjct: 380 EFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVI 429
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 149/272 (54%), Gaps = 11/272 (4%)
Query: 15 WDSYLV-LGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEML 73
W+S ++ + +I+ ++ LF +M +R+ +SW SMISG +NG ++A+D+FREM+ + +
Sbjct: 195 WNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDV 254
Query: 74 ETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAET 133
+ D +T S+L AC + A ++G H YI++ F+ N +AL+DMYCKC ++
Sbjct: 255 KPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLN 314
Query: 134 VFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLAS 193
VF+ K + W +M++G NG+ E A+ +F ++++ G+ PD + V+++C +
Sbjct: 315 VFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGE 374
Query: 194 LEEGAQFHGIA----LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF-KDEVSWT 248
+ +F + ++ I T+ +V++ G G +E+ L M +D V W+
Sbjct: 375 VHRADEFFRLMKEKYMIEPSIKHYTL---MVNVLGGAGLLEEAEALIKNMPVEEDTVIWS 431
Query: 249 ALVSAYSQFGKANETIRLFESMLTHGLKPDKV 280
+L+SA + G R + + L PD+
Sbjct: 432 SLLSACRKIGNVEMAKRAAKCL--KKLDPDET 461
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 43/280 (15%)
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRS-VKSAETVFKEMSYKNVVSWTAMLV 151
++E Q H+ +IKTG + S ++ C S + A VF +++KN W ++
Sbjct: 38 MRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIR 97
Query: 152 GYGQNGYSEEAVKIFCDM--QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
G+ ++ + E A+ IF DM V P T SV + G L +G Q HG+ + GL
Sbjct: 98 GFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGL 157
Query: 210 ------------------------------ISFVTVS-NALVSLYGKCGSIEDCHRLFSE 238
I F V+ N+++ + KCG I+ LF E
Sbjct: 158 EDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDE 217
Query: 239 MTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKG 298
M ++ VSW +++S + + G+ + + +F M +KPD T + +L+ C+ E+G
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG 277
Query: 299 NQIFESMTKE----HGIIPIQDHYSCIIDLFSRAGRLEEA 334
I E + + + I+ + +ID++ + G +EE
Sbjct: 278 RWIHEYIVRNRFELNSIV-----VTALIDMYCKCGCIEEG 312
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 175/345 (50%), Gaps = 28/345 (8%)
Query: 23 RLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSE------MLETD 76
RL IE +++ F D+ E++++SW S++ G ++G EA VF ++ + ++ +
Sbjct: 151 RLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISS 210
Query: 77 QYTFGSMLTAC------------------GGVMALQEGNQAHSYIIKTGFKDNIYAGSAL 118
G M AC GG + +E A +Y K+ + + +
Sbjct: 211 YAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGV-SWITM 269
Query: 119 VDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYG--VVP 176
+ Y K V+SAE +F+ MS K+ + + AM+ Y QNG ++A+K+F M + + P
Sbjct: 270 ISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQP 329
Query: 177 DDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLF 236
D+ TL SV+S+ L + G G+ +S +L+ LY K G ++F
Sbjct: 330 DEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMF 389
Query: 237 SEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVE 296
S + KD VS++A++ G A E LF +M+ + P+ VTF G+LS S + LV+
Sbjct: 390 SNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQ 449
Query: 297 KGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+G + F SM K+H + P DHY ++D+ RAGRLEEA + I M
Sbjct: 450 EGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSM 493
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 159/334 (47%), Gaps = 28/334 (8%)
Query: 40 RDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQA 99
DS SW ++ +Q+ +E +DV+ +M + + + S+L ACG + + +G
Sbjct: 67 HDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPI 126
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYS 159
H+ +K G +Y + LV +Y + ++ A+ F +++ KN VSW ++L GY ++G
Sbjct: 127 HAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGEL 186
Query: 160 EEAVKIFCDMQKYGVVPDDFTLGSVISS--CGNLASLEEGAQFHGIA----LVSGLISFV 213
+EA ++F + + V + + S GN SL A L+ G ++
Sbjct: 187 DEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCR 246
Query: 214 TVSNA-----------------LVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQ 256
+ A ++S Y K G ++ LF M+ KD++ + A+++ Y+Q
Sbjct: 247 EMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQ 306
Query: 257 FGKANETIRLFESMLTHG--LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPI 314
GK + ++LF ML ++PD++T V+S S+ G + ES EHG I I
Sbjct: 307 NGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV-ESYITEHG-IKI 364
Query: 315 QDHYSC-IIDLFSRAGRLEEARDFINQMLFRDSV 347
D S +IDL+ + G +A + + +D+V
Sbjct: 365 DDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTV 398
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 17/224 (7%)
Query: 128 VKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISS 187
V + + K + + SW ++ Q+ +E V ++ DM G+ P + SV+ +
Sbjct: 54 VTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRA 113
Query: 188 CGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSW 247
CG + ++ +G H AL +GL V V LV LY + G IE + F ++ K+ VSW
Sbjct: 114 CGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSW 173
Query: 248 TALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGN--QIFESM 305
+L+ Y + G+ +E R+F+ + P+K L + S + + GN +F +M
Sbjct: 174 NSLLHGYLESGELDEARRVFDKI------PEKDAVSWNLIISSYAKKGDMGNACSLFSAM 227
Query: 306 TKEHGIIPIQDH--YSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
P++ ++ +I + ++ AR + + M ++ V
Sbjct: 228 -------PLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGV 264
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 178/354 (50%), Gaps = 35/354 (9%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++ + + + + + W +I G + + ++I V+ +M L D T+ ++ +
Sbjct: 58 VDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKS 117
Query: 87 CGGVMALQEGNQAHSYIIKTG-----------------FKD--------------NIYAG 115
+ + G H ++K+G F+D N+
Sbjct: 118 SSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTW 177
Query: 116 SALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV 175
++++D Y K V SA VF EMS ++VV+W++M+ GY + G +A++IF M + G
Sbjct: 178 NSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS 237
Query: 176 -PDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHR 234
++ T+ SVI +C +L +L G H L L V + +L+ +Y KCGSI D
Sbjct: 238 KANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWS 297
Query: 235 LFSEMTFK--DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRT 292
+F + K D + W A++ + G E+++LF M + PD++TF+ +L+ CS
Sbjct: 298 VFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHG 357
Query: 293 RLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDS 346
LV++ F+S+ KE G P +HY+C++D+ SRAG +++A DFI++M + +
Sbjct: 358 GLVKEAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPT 410
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 151/304 (49%), Gaps = 18/304 (5%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFRE-MRSEMLETDQYTFGSMLTACG 88
+R +F +M ERD ++W+SMI G + G + +A+++F + MR + ++ T S++ AC
Sbjct: 193 ARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACA 252
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK--NVVSW 146
+ AL G H YI+ + ++L+DMY KC S+ A +VF S K + + W
Sbjct: 253 HLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMW 312
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
A++ G +G+ E++++F M++ + PD+ T ++++C + ++E F
Sbjct: 313 NAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKE 372
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWT-ALVSAYSQFGKAN--ET 263
SG +V + + G ++D H SEM K S AL++ G ET
Sbjct: 373 SGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAET 432
Query: 264 I--RLFESMLTHGLKP-DKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC 320
+ +L E L+P + ++G+ +V + + + E+M K+ G+ I H
Sbjct: 433 VGKKLIE------LQPHNDGRYVGLANVYAINKQFRAARSMREAMEKK-GVKKIAGH--S 483
Query: 321 IIDL 324
I+DL
Sbjct: 484 ILDL 487
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 166/314 (52%), Gaps = 3/314 (0%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
S + F + E+D ISW S++S C G +++D+F +M+ F S L C
Sbjct: 268 SMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSR 327
Query: 90 VMALQEGNQAHSYIIKTGFK-DNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTA 148
+Q G Q H Y++K GF +++ SAL+DMY KC ++++ +++ + N+ +
Sbjct: 328 NSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNS 387
Query: 149 MLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVIS--SCGNLASLEEGAQFHGIALV 206
++ G +++ +++F M G D+ TL +V+ S SL H A+
Sbjct: 388 LMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIK 447
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
SG + V VS +L+ Y K G E ++F E+ + T++++ Y++ G + +++
Sbjct: 448 SGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKM 507
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
M L PD+VT + VLS CS + LVE+G IF+S+ ++GI P + Y+C++DL
Sbjct: 508 LREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLG 567
Query: 327 RAGRLEEARDFINQ 340
RAG +E+A + Q
Sbjct: 568 RAGLVEKAERLLLQ 581
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 160/323 (49%), Gaps = 4/323 (1%)
Query: 13 RKWDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEM 72
R+ D + G LL + + F +M RD +++ +ISG ++ G AI+++ EM S
Sbjct: 51 RRIDELIKSGNLL---SAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCG 107
Query: 73 LETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAE 132
L TF S+L+ C + +EG Q H +I GF N++ SALV +Y R V A
Sbjct: 108 LRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVAL 167
Query: 133 TVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLA 192
+F EM +N+ +L + Q G S+ +++ M+ GV + T +I C +
Sbjct: 168 KLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDR 227
Query: 193 SLEEGAQFHGIALVSGL-ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALV 251
+ EG Q H + + SG IS + V+N LV Y CG + R F+ + KD +SW ++V
Sbjct: 228 LVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIV 287
Query: 252 SAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGI 311
S + +G +++ LF M G +P F+ L+ CSR ++ G QI + K
Sbjct: 288 SVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFD 347
Query: 312 IPIQDHYSCIIDLFSRAGRLEEA 334
+ S +ID++ + +E +
Sbjct: 348 VSSLHVQSALIDMYGKCNGIENS 370
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 113/247 (45%)
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSE 160
S ++ D +Y + +D K ++ SA F EMS ++VV++ ++ G + G S
Sbjct: 35 SSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSL 94
Query: 161 EAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALV 220
A++++ +M G+ T SV+S C + EG Q H + G + V +ALV
Sbjct: 95 RAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALV 154
Query: 221 SLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKV 280
LY ++ +LF EM ++ L+ + Q G++ ++ M G+ + +
Sbjct: 155 GLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGL 214
Query: 281 TFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQ 340
T+ ++ CS RLV +G Q+ + K I + ++D +S G L + N
Sbjct: 215 TYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNA 274
Query: 341 MLFRDSV 347
+ +D +
Sbjct: 275 VPEKDVI 281
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 175/354 (49%), Gaps = 38/354 (10%)
Query: 38 RERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGN 97
R + + ++I G ++ ++ +F M + ++ + TF S++ A ++ G
Sbjct: 47 RWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGV 106
Query: 98 QAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF---------------------- 135
H +K GF + + ++ V Y + ++S+ +F
Sbjct: 107 ALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNG 166
Query: 136 ---------KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDM---QKYGVVPDDFTLGS 183
+ M +VVSWT ++ G+ + G +A+ +F +M ++ + P++ T S
Sbjct: 167 EMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVS 226
Query: 184 VISSCGNL--ASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF 241
V+SSC N + G Q HG + +I T+ AL+ +YGK G +E +F ++
Sbjct: 227 VLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRD 286
Query: 242 KDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQI 301
K +W A++SA + G+ + + +FE M + + P+ +T + +L+ C+R++LV+ G Q+
Sbjct: 287 KKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQL 346
Query: 302 FESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRD--SVLMQLVG 353
F S+ E+ IIP +HY C++DL RAG L +A +FI + F SVL L+G
Sbjct: 347 FSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLG 400
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 124/246 (50%), Gaps = 13/246 (5%)
Query: 11 CIRKWDSYL-VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM- 68
C+ +S L GR ++ + + F M D +SWT++I+G ++ GLH +A+ VF EM
Sbjct: 151 CVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMI 210
Query: 69 --RSEMLETDQYTFGSMLTAC-----GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDM 121
++ ++ TF S+L++C GG+ + G Q H Y++ G+AL+DM
Sbjct: 211 QNERAVITPNEATFVSVLSSCANFDQGGI---RLGKQIHGYVMSKEIILTTTLGTALLDM 267
Query: 122 YCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTL 181
Y K ++ A T+F ++ K V +W A++ NG ++A+++F M+ V P+ TL
Sbjct: 268 YGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITL 327
Query: 182 GSVISSCGNLASLEEGAQ-FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT 240
+++++C ++ G Q F I +I +V L G+ G + D +
Sbjct: 328 LAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLP 387
Query: 241 FKDEVS 246
F+ + S
Sbjct: 388 FEPDAS 393
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 160/315 (50%), Gaps = 15/315 (4%)
Query: 45 WTSMISGCTQNGLHREAIDVFREM------RSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
W ++I G + A +R M S + D T L AC + +Q
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQ 130
Query: 99 AHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGY 158
H I + G + + L+D Y K + SA +F EM ++V SW A++ G
Sbjct: 131 LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNR 190
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIALVSGLISFVTVSN 217
+ EA++++ M+ G+ + T+ + + +C +L ++EG FHG + + V VSN
Sbjct: 191 ASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN-----VIVSN 245
Query: 218 ALVSLYGKCGSIEDCHRLFSEMTFKDE-VSWTALVSAYSQFGKANETIRLFESMLTHGLK 276
A + +Y KCG ++ +++F + T K V+W +++ ++ G+A+ + +F+ + +G+K
Sbjct: 246 AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIK 305
Query: 277 PDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARD 336
PD V+++ L+ C LVE G +F +M + G+ HY C++DL SRAGRL EA D
Sbjct: 306 PDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHD 364
Query: 337 FINQM-LFRDSVLMQ 350
I M + D VL Q
Sbjct: 365 IICSMSMIPDPVLWQ 379
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 122/247 (49%), Gaps = 11/247 (4%)
Query: 10 ICIRKWDSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR 69
+C D+Y G L+ + +LF +M RD SW ++I+G EA+++++ M
Sbjct: 146 LCTTLLDAYSKNGDLI---SAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 70 SEMLETDQYTFGSMLTACGGVMALQEG-NQAHSYIIKTGFKDNIYAGSALVDMYCKCRSV 128
+E + + T + L AC + ++EG N H Y DN+ +A +DMY KC V
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGY-----SNDNVIVSNAAIDMYSKCGFV 257
Query: 129 KSAETVFKEMS-YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISS 187
A VF++ + K+VV+W M+ G+ +G + A++IF ++ G+ PDD + + +++
Sbjct: 258 DKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTA 317
Query: 188 CGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT-FKDEVS 246
C + +E G G+ + +V L + G + + H + M+ D V
Sbjct: 318 CRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVL 377
Query: 247 WTALVSA 253
W +L+ A
Sbjct: 378 WQSLLGA 384
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 11/224 (4%)
Query: 131 AETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVP------DDFTLGSV 184
A +F+ + W A++ G+ + + A + M + D T
Sbjct: 56 AVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFT 115
Query: 185 ISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDE 244
+ +C Q H GL + + L+ Y K G + ++LF EM +D
Sbjct: 116 LKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDV 175
Query: 245 VSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFES 304
SW AL++ +A+E + L++ M T G++ +VT + L CS V++G IF
Sbjct: 176 ASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHG 235
Query: 305 MTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVL 348
+ ++ I+ + ID++S+ G +++A Q + SV+
Sbjct: 236 YSNDNVIVS-----NAAIDMYSKCGFVDKAYQVFEQFTGKKSVV 274
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 178/339 (52%), Gaps = 14/339 (4%)
Query: 17 SYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETD 76
+Y+ G M++ + ++F ++ E+++I++ ++++G +NG +A+ +F +M +E
Sbjct: 360 AYMSFG---MVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELT 416
Query: 77 QYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK 136
++ S + ACG V + Q H + IK G N +AL+DM +C + AE +F
Sbjct: 417 DFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFD 476
Query: 137 E--MSYKNVVSWTAMLVGYGQNGYSEEAVKIF----CDMQKYGVVPDDFTLGSVISSCGN 190
+ + + + T+++ GY +NG ++AV +F C+ + + D+ +L +++ CG
Sbjct: 477 QWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLF---LDEVSLTLILAVCGT 533
Query: 191 LASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTAL 250
L E G Q H AL +G S +++ N+L+S+Y KC +D ++F+ M D +SW +L
Sbjct: 534 LGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSL 593
Query: 251 VSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSV--CSRTRLVEKGNQIFESMTKE 308
+S Y +E + L+ M +KPD +T V+S + + + +F SM
Sbjct: 594 ISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTI 653
Query: 309 HGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ I P +HY+ + + G LEEA D IN M + V
Sbjct: 654 YDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEV 692
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 145/260 (55%), Gaps = 11/260 (4%)
Query: 17 SYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSE-MLET 75
+YL LG ++ +F + +S+T++ISG ++ L EA+ VF MR +++
Sbjct: 123 TYLKLG---FPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQP 179
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCK--CRSVKSAET 133
++YTF ++LTAC V G Q H I+K+GF ++++ ++L+ +Y K S
Sbjct: 180 NEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLK 239
Query: 134 VFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQK---YGVVPDDFTLGSVISSCGN 190
+F E+ ++V SW ++ + G S +A +F +M + +GV D FTL +++SSC +
Sbjct: 240 LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGV--DSFTLSTLLSSCTD 297
Query: 191 LASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTAL 250
+ L G + HG A+ GL+ ++V+NAL+ Y K ++ L+ M +D V++T +
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 251 VSAYSQFGKANETIRLFESM 270
++AY FG + + +F ++
Sbjct: 358 ITAYMSFGMVDSAVEIFANV 377
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 141/309 (45%), Gaps = 35/309 (11%)
Query: 28 EDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM-RSEMLETDQYTFGSMLTA 86
+D +LF ++ +RD SW +++S + G +A D+F EM R E D +T ++L++
Sbjct: 235 DDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSS 294
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAET------------- 133
C L G + H I+ G + +AL+ Y K +K E+
Sbjct: 295 CTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTF 354
Query: 134 ------------------VFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV 175
+F ++ KN +++ A++ G+ +NG+ +A+K+F DM + GV
Sbjct: 355 TEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVE 414
Query: 176 PDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRL 235
DF+L S + +CG ++ + Q HG + G + AL+ + +C + D +
Sbjct: 415 LTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEM 474
Query: 236 FSE--MTFKDEVSWTALVSAYSQFGKANETIRLFESML-THGLKPDKVTFIGVLSVCSRT 292
F + + T+++ Y++ G ++ + LF L L D+V+ +L+VC
Sbjct: 475 FDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTL 534
Query: 293 RLVEKGNQI 301
E G QI
Sbjct: 535 GFREMGYQI 543
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 129/237 (54%), Gaps = 5/237 (2%)
Query: 115 GSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGV 174
G+AL+ Y K + A VF +S VVS+TA++ G+ + EA+K+F M+K G+
Sbjct: 117 GNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGL 176
Query: 175 V-PDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGK--CGSIED 231
V P+++T +++++C ++ G Q HG+ + SG ++ V VSN+L+SLY K S +D
Sbjct: 177 VQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDD 236
Query: 232 CHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESM-LTHGLKPDKVTFIGVLSVCS 290
+LF E+ +D SW +VS+ + GK+++ LF M G D T +LS C+
Sbjct: 237 VLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCT 296
Query: 291 RTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ ++ +G ++ + G++ + +I +S+ +++ M+ +D+V
Sbjct: 297 DSSVLLRGRELHGRAIRI-GLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAV 352
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 194 LEEGAQFHGIALVSGL-ISFVTV-------SNALVSLYGKCGSIEDCHRLFSEMTFKDEV 245
L AQ+H + + + SF+ + NAL+S Y K G + +F ++ V
Sbjct: 87 LRLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVV 146
Query: 246 SWTALVSAYSQFGKANETIRLFESMLTHGL-KPDKVTFIGVLSVCSRTRLVEKGNQIFES 304
S+TAL+S +S+ E +++F M GL +P++ TF+ +L+ C R G QI
Sbjct: 147 SYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQI--- 203
Query: 305 MTKEHGII 312
HG+I
Sbjct: 204 ----HGLI 207
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 143/287 (49%), Gaps = 5/287 (1%)
Query: 60 EAIDVFREMR-SEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSAL 118
E +FR +R + L + + L C L G Q H I GF + + L
Sbjct: 95 EGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTL 154
Query: 119 VDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKY---GVV 175
+D+Y C + A VF E+ ++ VSW + Y +N + + + +F M+ V
Sbjct: 155 MDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVK 214
Query: 176 PDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRL 235
PD T + +C NL +L+ G Q H +GL + +SN LVS+Y +CGS++ +++
Sbjct: 215 PDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQV 274
Query: 236 FSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLV 295
F M ++ VSWTAL+S + G E I F ML G+ P++ T G+LS CS + LV
Sbjct: 275 FYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLV 334
Query: 296 EKGNQIFESM-TKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+G F+ M + E I P HY C++DL RA L++A I M
Sbjct: 335 AEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSM 381
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 130/254 (51%), Gaps = 16/254 (6%)
Query: 29 DSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEM---LETDQYTFGSMLT 85
D+ ++F ++ +RD++SW + S +N R+ + +F +M++++ ++ D T L
Sbjct: 166 DACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQ 225
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
AC + AL G Q H +I + G + + LV MY +C S+ A VF M +NVVS
Sbjct: 226 ACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVS 285
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
WTA++ G NG+ +EA++ F +M K+G+ P++ TL ++S+C + + EG F +
Sbjct: 286 WTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFD-RM 344
Query: 206 VSGLISFVTVSN-----ALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFGK 259
SG F N +V L G+ ++ + L M K D W L+ A G
Sbjct: 345 RSG--EFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGD 402
Query: 260 ANETIRLFESMLTH 273
+ L E +++H
Sbjct: 403 ----VELGERVISH 412
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
++ + Q+F MRER+ +SWT++ISG NG +EAI+ F EM + ++ T +L+A
Sbjct: 268 MDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSA 327
Query: 87 CGGVMALQEGNQAHSYIIKTGF--KDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK-NV 143
C + EG + F K N++ +VD+ + R + A ++ K M K +
Sbjct: 328 CSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDS 387
Query: 144 VSWTAML 150
W +L
Sbjct: 388 TIWRTLL 394
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 159/301 (52%), Gaps = 5/301 (1%)
Query: 40 RDSISWTSMISGCTQNGLHREAIDVFREM-RSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
RD SW S+ISGC +G H E++ F+ M R + D T ++A G + + +G
Sbjct: 543 RDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRC 602
Query: 99 AHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGY 158
H IK+ + + + L+ MY +C+ ++SA VF +S N+ SW ++ QN
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKA 662
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNA 218
E ++F +++ + P++ T ++S+ L S G Q H + G + VS A
Sbjct: 663 GREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAA 719
Query: 219 LVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG-LKP 277
LV +Y CG +E ++F +W +++SA+ G + + LF+ + ++ ++P
Sbjct: 720 LVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEP 779
Query: 278 DKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDF 337
+K +FI +LS CS + +++G ++ M ++ G+ P+ +H I+D+ RAG+L EA +F
Sbjct: 780 NKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEF 839
Query: 338 I 338
I
Sbjct: 840 I 840
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 137/244 (56%), Gaps = 4/244 (1%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMA 92
+F M RD +SW ++++ C NG R+++ F+ M E D TF +++AC +
Sbjct: 245 VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEE 304
Query: 93 LQEGNQAHSYIIKTGFKD--NIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAML 150
L G H +IK+G+ ++ G++++ MY KC ++AETVF+E+ ++V+S A+L
Sbjct: 305 LTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAIL 364
Query: 151 VGYGQNGYSEEAVKIFCDMQKYGVV-PDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL 209
G+ NG EEA I MQ + PD T+ S+ S CG+L+ EG HG + +
Sbjct: 365 NGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEM 424
Query: 210 IS-FVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
S + V N+++ +YGKCG LF T +D VSW +++SA+SQ G ++ LF+
Sbjct: 425 QSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFK 484
Query: 269 SMLT 272
+++
Sbjct: 485 EVVS 488
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 158/329 (48%), Gaps = 3/329 (0%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
GR + S LF +++E+D I W SMI+ QNG + A+ +F EM + E D T
Sbjct: 133 GRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLL 192
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
+A + ++ + H I+TG + +AL+++Y K ++ SAE VF M ++
Sbjct: 193 LAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHR 252
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
++VSW ++ NG+ ++++ F M G D T VIS+C ++ L G H
Sbjct: 253 DIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLH 312
Query: 202 GIALVSGLI--SFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
G+ + SG + V+V N+++S+Y KCG E +F E+ +D +S A+++ ++ G
Sbjct: 313 GLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGM 372
Query: 260 ANETIRLFESMLT-HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHY 318
E + M + ++PD T + + S+C +G + + +
Sbjct: 373 FEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVI 432
Query: 319 SCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ +ID++ + G +A RD V
Sbjct: 433 NSVIDMYGKCGLTTQAELLFKTTTHRDLV 461
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 153/315 (48%), Gaps = 27/315 (8%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEM--LETDQYT 79
G+ + + LF RD +SW SMIS +QNG +A ++F+E+ SE + T
Sbjct: 440 GKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLST 499
Query: 80 FGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS 139
++LT+C +L G H ++ K G + SA + MS
Sbjct: 500 VLAILTSCDSSDSLIFGKSVHCWLQKLG-------------------DLTSAFLRLETMS 540
Query: 140 -YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDF-TLGSVISSCGNLASLEEG 197
+++ SW +++ G +G+ E+++ F M + G + D TL IS+ GNL + +G
Sbjct: 541 ETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQG 600
Query: 198 AQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQF 257
FHG+A+ S + N L+++YG+C IE ++F ++ + SW ++SA SQ
Sbjct: 601 RCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQN 660
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH 317
E +LF ++ L+P+++TF+G+LS ++ G Q + + G
Sbjct: 661 KAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRR-GFQANPFV 716
Query: 318 YSCIIDLFSRAGRLE 332
+ ++D++S G LE
Sbjct: 717 SAALVDMYSSCGMLE 731
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 134/264 (50%), Gaps = 8/264 (3%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
GR IE + ++F + + + SW +IS +QN RE +FR ++ LE ++ TF
Sbjct: 627 GRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFV 683
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
+L+A + + G QAH ++I+ GF+ N + +ALVDMY C +++ VF+
Sbjct: 684 GLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVN 743
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYG-VVPDDFTLGSVISSCGNLASLEEGAQF 200
++ +W +++ +G +G E+A+++F ++ + P+ + S++S+C + ++EG +
Sbjct: 744 SISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSY 803
Query: 201 HGIALVSGLISFVTVSNA-LVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSAYSQFG 258
+ + VT +V + G+ G + + + + + + W AL+SA + G
Sbjct: 804 YKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHG 863
Query: 259 KANETIRLFESMLTHGLKPDKVTF 282
+ E + ++PD ++
Sbjct: 864 DTKLGKEVAEVLFE--MEPDNASY 885
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 124/257 (48%), Gaps = 17/257 (6%)
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYS 159
H + +K G ++ S L+ Y + + S+ +F E+ K+V+ W +M+ QNG
Sbjct: 110 HCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRY 169
Query: 160 EEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNAL 219
AV +F +M G D TL S+ +L + + H +A+ +GL+ ++ NAL
Sbjct: 170 IAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNAL 229
Query: 220 VSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDK 279
++LY K ++ +F+ M +D VSW +++ G ++++ F+SM G + D
Sbjct: 230 MNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADT 289
Query: 280 VTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYS---------CIIDLFSRAGR 330
VTF V+S CS + G + HG++ I+ YS II ++S+ G
Sbjct: 290 VTFSCVISACSSIEELTLGESL-------HGLV-IKSGYSPEAHVSVGNSIISMYSKCGD 341
Query: 331 LEEARDFINQMLFRDSV 347
E A +++ RD +
Sbjct: 342 TEAAETVFEELVCRDVI 358
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 1/162 (0%)
Query: 195 EEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAY 254
E H AL GL+ + S+ L++ YG+ G + LF E+ KD + W ++++A
Sbjct: 104 ETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITAL 163
Query: 255 SQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPI 314
+Q G+ + LF M+ G + D T + S S L K + + + E G++
Sbjct: 164 NQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCS-MLHCLAIETGLVGD 222
Query: 315 QDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLMQLVGQPC 356
+ +++L+++ L A M RD V + C
Sbjct: 223 SSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKC 264
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 152/313 (48%), Gaps = 1/313 (0%)
Query: 30 SRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGG 89
+ +L+ ++ + TS++S + G A+ F + R ++ D +L C
Sbjct: 300 AERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKK 359
Query: 90 VMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAM 149
+ G H Y IK+G + L+ MY K V++ +F+++ ++SW ++
Sbjct: 360 SSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSV 419
Query: 150 LVGYGQNGYSEEAVKIFCDMQ-KYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSG 208
+ G Q+G + A ++F M G++PD T+ S+++ C L L G + HG L +
Sbjct: 420 ISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNN 479
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFE 268
+ V AL+ +Y KCG+ +F + +W +++S YS G + + +
Sbjct: 480 FENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYL 539
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
M GLKPD++TF+GVLS C+ V++G F +M KE GI P HY+ ++ L RA
Sbjct: 540 EMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRA 599
Query: 329 GRLEEARDFINQM 341
EA I +M
Sbjct: 600 CLFTEALYLIWKM 612
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 126/251 (50%), Gaps = 4/251 (1%)
Query: 40 RDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACG---GVMALQEG 96
RD + S++ C + I +FR++ L + +T L A LQ
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQV- 69
Query: 97 NQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQN 156
Q +++ K+G +Y ++L+++Y K V SA+ +F EM ++ V W A++ GY +N
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
GY +A K+F M + G P TL +++ CG + +G HG+A SGL V
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLK 276
NAL+S Y KC + LF EM K VSW ++ AYSQ G E I +F++M ++
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Query: 277 PDKVTFIGVLS 287
VT I +LS
Sbjct: 250 ISPVTIINLLS 260
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 137/272 (50%), Gaps = 6/272 (2%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ ++ LF +M ERD++ W ++I G ++NG +A +F M + T ++L
Sbjct: 101 VTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPF 160
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
CG + +G H K+G + + +AL+ Y KC + SAE +F+EM K+ VSW
Sbjct: 161 CGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSW 220
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
M+ Y Q+G EEA+ +F +M + V T+ +++S+ + L H + +
Sbjct: 221 NTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVK 274
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
G+++ ++V +LV Y +CG + RL++ V T++VS Y++ G + +
Sbjct: 275 CGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVY 334
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKG 298
F +K D V +G+L C ++ ++ G
Sbjct: 335 FSKTRQLCMKIDAVALVGILHGCKKSSHIDIG 366
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 155/306 (50%), Gaps = 12/306 (3%)
Query: 33 LFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMA 92
LF +M+++ ++SW +MI +Q+GL EAI VF+ M + +E T ++L+A
Sbjct: 208 LFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEP 267
Query: 93 LQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVG 152
L H ++K G ++I ++LV Y +C + SAE ++ ++V T+++
Sbjct: 268 L------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSC 321
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISF 212
Y + G + AV F ++ + D L ++ C + ++ G HG A+ SGL +
Sbjct: 322 YAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTK 381
Query: 213 VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF-ESML 271
V N L+++Y K +E LF ++ +SW +++S Q G+A+ +F + ML
Sbjct: 382 TLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMML 441
Query: 272 THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC--IIDLFSRAG 329
T GL PD +T +L+ CS+ + G ++ + + +++ C +ID++++ G
Sbjct: 442 TGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF---ENENFVCTALIDMYAKCG 498
Query: 330 RLEEAR 335
+A
Sbjct: 499 NEVQAE 504
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 34/280 (12%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR-SEMLETDQYTFGSMLT 85
+E LF ++E ISW S+ISGC Q+G A +VF +M + L D T S+L
Sbjct: 398 VETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLA 457
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
C + L G + H Y ++ F++ + +AL+DMY KC + AE+VFK + +
Sbjct: 458 GCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTAT 517
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W +M+ GY +G A+ + +M++ G+ PD+ T V+S+C HG +
Sbjct: 518 WNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACN-----------HGGFV 566
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
G I F A++ +G +++ + +V + E +
Sbjct: 567 DEGKICF----RAMIKEFGISPTLQH---------------YALMVGLLGRACLFTEALY 607
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESM 305
L M +KPD + +LS C R +E G + M
Sbjct: 608 LIWKM---DIKPDSAVWGALLSACIIHRELEVGEYVARKM 644
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 12/219 (5%)
Query: 133 TVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFT----LGSVISSC 188
T+++++SY + ++L S + IF D+ + + P+ FT L + +S
Sbjct: 8 TLYRDLSY-----FHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSF 62
Query: 189 GNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWT 248
+ E Q H SGL FV V +L++LY K G + LF EM +D V W
Sbjct: 63 NSFKLQVEQVQTHLTK--SGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWN 120
Query: 249 ALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKE 308
AL+ YS+ G + +LF ML G P T + +L C + V +G + + +
Sbjct: 121 ALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSV-HGVAAK 179
Query: 309 HGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
G+ + +I +S+ L A +M + +V
Sbjct: 180 SGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTV 218
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 157/326 (48%), Gaps = 33/326 (10%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
D Y G+L ED+R++F ++ +D +W SMI+G Q G +A ++F M+ L
Sbjct: 395 DMYSKCGKL---EDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRP 451
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
+ T+ +M++ G+ N G A+ D++ + +
Sbjct: 452 NIITWNTMIS---------------------GYIKNGDEGEAM-DLFQRMEKDGKVQ--- 486
Query: 136 KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE 195
+N +W ++ GY QNG +EA+++F MQ +P+ T+ S++ +C NL +
Sbjct: 487 -----RNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAK 541
Query: 196 EGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYS 255
+ HG L L + V NAL Y K G IE +F M KD ++W +L+ Y
Sbjct: 542 MVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYV 601
Query: 256 QFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ 315
G + LF M T G+ P++ T ++ V++G ++F S+ ++ IIP
Sbjct: 602 LHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPAL 661
Query: 316 DHYSCIIDLFSRAGRLEEARDFINQM 341
+H S ++ L+ RA RLEEA FI +M
Sbjct: 662 EHCSAMVYLYGRANRLEEALQFIQEM 687
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 158/323 (48%), Gaps = 40/323 (12%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I D+R++F MRER+ +W++MI ++ RE +FR M + + D + F +L
Sbjct: 131 IADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQG 190
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C ++ G HS +IK G + ++++ +Y KC + A F+ M ++V++W
Sbjct: 191 CANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAW 250
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
++L+ Y QNG EEAV++ +M+K G+ P
Sbjct: 251 NSVLLAYCQNGKHEEAVELVKEMEKEGISP------------------------------ 280
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEM-TF---KDEVSWTALVSAYSQFGKANE 262
GL+++ N L+ Y + G + L +M TF D +WTA++S G +
Sbjct: 281 -GLVTW----NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQ 335
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
+ +F M G+ P+ VT + +S CS +++ +G+++ S+ + G I + ++
Sbjct: 336 ALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV-HSIAVKMGFIDDVLVGNSLV 394
Query: 323 DLFSRAGRLEEARDFINQMLFRD 345
D++S+ G+LE+AR + + +D
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNKD 417
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 161/334 (48%), Gaps = 32/334 (9%)
Query: 11 CIRKWDSYL-VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMR 69
C+R +S L V + ++ + + F MRERD I+W S++ QNG H EA+++ +EM
Sbjct: 215 CLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEME 274
Query: 70 SEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVK 129
E + T+ ++ GG L + + A +D+ K +
Sbjct: 275 KEGISPGLVTWNILI---GGYNQLGKCDAA-------------------MDLMQKMETFG 312
Query: 130 SAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCG 189
VF +WTAM+ G NG +A+ +F M GVVP+ T+ S +S+C
Sbjct: 313 ITADVF---------TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACS 363
Query: 190 NLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTA 249
L + +G++ H IA+ G I V V N+LV +Y KCG +ED ++F + KD +W +
Sbjct: 364 CLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNS 423
Query: 250 LVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEH 309
+++ Y Q G + LF M L+P+ +T+ ++S + + +F+ M K+
Sbjct: 424 MITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Query: 310 GIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLF 343
+ ++ II + + G+ +EA + +M F
Sbjct: 484 KVQRNTATWNLIIAGYIQNGKKDEALELFRKMQF 517
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 5/231 (2%)
Query: 54 QNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGF--KDN 111
+NG EA + + + + T+ +L +C ++ G H+ + G + +
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPD 114
Query: 112 IYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQK 171
++ + L+ MY KC + A VF M +N+ +W+AM+ Y + E K+F M K
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 172 YGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIED 231
GV+PDDF ++ C N +E G H + + G+ S + VSN+++++Y KCG ++
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 232 CHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTF 282
+ F M +D ++W +++ AY Q GK E + L + M G+ P VT+
Sbjct: 235 ATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW 285
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 133/252 (52%), Gaps = 6/252 (2%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
+R++ +W +I+G QNG EA+++FR+M+ + T S+L AC ++ + +
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVRE 545
Query: 99 AHSYIIKTGFKDNIYA-GSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNG 157
H +++ D I+A +AL D Y K ++ + T+F M K++++W +++ GY +G
Sbjct: 546 IHGCVLRRNL-DAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHG 604
Query: 158 YSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIALVSGLISFVTVS 216
A+ +F M+ G+ P+ TL S+I + G + +++EG + F+ IA +I +
Sbjct: 605 SYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHC 664
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFKDEVS-WTALVSAYSQFGKANETIRLFESMLTHGL 275
+A+V LYG+ +E+ + EM + E W + ++ G + I E++ + L
Sbjct: 665 SAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFS--L 722
Query: 276 KPDKVTFIGVLS 287
+P+ ++S
Sbjct: 723 EPENTATESIVS 734
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 6/195 (3%)
Query: 155 QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISF-- 212
+NG EA K + + G T ++ SC + S+ G H GL +
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPD 114
Query: 213 VTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLT 272
V V L+S+Y KCG I D ++F M ++ +W+A++ AYS+ + E +LF M+
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 273 HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLE 332
G+ PD F +L C+ VE G ++ S+ + G+ + I+ ++++ G L+
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAG-KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233
Query: 333 EARDFINQMLFRDSV 347
A F +M RD +
Sbjct: 234 FATKFFRRMRERDVI 248
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 143/275 (52%), Gaps = 11/275 (4%)
Query: 93 LQEGNQAHSYIIKTGF-KDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLV 151
L+ G H + K GF ++ G+ L+ Y K ++ A VF EM + V+W AM+
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 152 GY--GQNGYSEEAVKIFCDMQKY-----GVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
GY ++ + A K +++ GV P D T+ V+S+ LE G+ HG
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 205 LVSGLISFVTV--SNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
G V V ALV +Y KCG + + +F M K+ +WT++ + + G+ NE
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 263 TIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
T L M G+KP+++TF +LS LVE+G ++F+SM G+ P+ +HY CI+
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 323 DLFSRAGRLEEARDFINQMLFR-DSVLMQLVGQPC 356
DL +AGR++EA FI M + D++L++ + C
Sbjct: 367 DLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNAC 401
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 120/220 (54%), Gaps = 1/220 (0%)
Query: 131 AETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKY-GVVPDDFTLGSVISSCG 189
A+ V + S +NV++W M+ GY +N EEA+K +M + + P+ F+ S +++C
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 190 NLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTA 249
L L H + + SG+ +S+ALV +Y KCG I +F + D W A
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 250 LVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEH 309
+++ ++ G A E IR+F M + PD +TF+G+L+ CS L+E+G + F M++
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 310 GIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLM 349
I P +HY ++DL RAGR++EA + I M V++
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVI 336
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 153/298 (51%), Gaps = 14/298 (4%)
Query: 19 LVLGRLLMIEDS---RQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRS-EMLE 74
L++ L+ I +S +++ + +++ I+W MI G +N + EA+ + M S ++
Sbjct: 103 LIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIK 162
Query: 75 TDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETV 134
++++F S L AC + L HS +I +G + N SALVD+Y KC + ++ V
Sbjct: 163 PNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREV 222
Query: 135 FKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASL 194
F + +V W AM+ G+ +G + EA+++F +M+ V PD T ++++C + L
Sbjct: 223 FYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLL 282
Query: 195 EEGAQFHGIALVSGLISF---VTVSNALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTAL 250
EEG ++ G L+S S + A+V L G+ G +++ + L M + D V W +L
Sbjct: 283 EEGKEYFG--LMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 251 VSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKE 308
+S+ + + L E + + K ++ + ++ S T+ E ++ E M+KE
Sbjct: 341 LSSSRTY----KNPELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKE 394
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 155/325 (47%), Gaps = 24/325 (7%)
Query: 30 SRQLFCDMRER----DSISWTSMISGCT--QNG-------LHREAIDVFREMRSEMLETD 76
S++ F +MR R D ++ + C +NG LH +A +R +L +D
Sbjct: 99 SKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQA------LRFGLL-SD 151
Query: 77 QYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK 136
+T +++ + + Q + + ++ + L+D K R + A +F
Sbjct: 152 LFTLNTLIRVYSLIAPIDSALQ----LFDENPQRDVVTYNVLIDGLVKAREIVRARELFD 207
Query: 137 EMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE 196
M +++VSW +++ GY Q + EA+K+F +M G+ PD+ + S +S+C ++
Sbjct: 208 SMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQK 267
Query: 197 GAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQ 256
G H L ++ LV Y KCG I+ +F + K +W A+++ +
Sbjct: 268 GKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAM 327
Query: 257 FGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQD 316
G T+ F M++ G+KPD VTFI VL CS + LV++ +F+ M + +
Sbjct: 328 HGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMK 387
Query: 317 HYSCIIDLFSRAGRLEEARDFINQM 341
HY C+ DL RAG +EEA + I QM
Sbjct: 388 HYGCMADLLGRAGLIEEAAEMIEQM 412
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 145/331 (43%), Gaps = 40/331 (12%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
I +R+LF M RD +SW S+ISG Q REAI +F EM + L+ D S L+A
Sbjct: 199 IVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSA 258
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
C Q+G H Y + + + + LVD Y KC + +A +F+ S K + +W
Sbjct: 259 CAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTW 318
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
AM+ G +G E V F M G+ PD T SV+ C +
Sbjct: 319 NAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSH---------------- 362
Query: 207 SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRL 266
SGL+ + +L+ + S+ D +R EM + + + G E +
Sbjct: 363 SGLV------DEARNLFDQMRSLYDVNR---EMK-----HYGCMADLLGRAGLIEEAAEM 408
Query: 267 FESMLTHGLKPDK-VTFIGVLSVC---SRTRLVEKGNQIFESMTKEHGIIPIQDHYSCII 322
E M G +K + + G+L C + EK ++++ E G + Y ++
Sbjct: 409 IEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGV-----YKVMV 463
Query: 323 DLFSRAGRLEEARDFINQMLFRDSVLMQLVG 353
++++ A R EE + +++ RD + + VG
Sbjct: 464 EMYANAERWEEVVK-VREIIDRDKKVKKNVG 493
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 146/302 (48%), Gaps = 31/302 (10%)
Query: 75 TDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETV 134
D YTF S+++ + G H IK G + ++L+ MY C ++ A+ +
Sbjct: 116 PDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKL 175
Query: 135 FKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVP------------------ 176
F E+ +++VSW +++ G +NG A K+F +M ++
Sbjct: 176 FVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSI 235
Query: 177 -------------DDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLY 223
++ TL ++++CG A L+EG H + + L S V + AL+ +Y
Sbjct: 236 SLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMY 295
Query: 224 GKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFI 283
GKC + R+F ++ +++V+W ++ A+ G+ + LFE+M+ L+PD+VTF+
Sbjct: 296 GKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFV 355
Query: 284 GVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLF 343
GVL C+R LV +G + M E I P H C+ +L+S AG EEA + + +
Sbjct: 356 GVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPD 415
Query: 344 RD 345
D
Sbjct: 416 ED 417
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 142/301 (47%), Gaps = 29/301 (9%)
Query: 30 SRQLFCDMRERDSISWTSMIS---GCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ +LF +M +++ ISW MIS G G+ +I +FREM + ++ T +L A
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGV---SISLFREMVRAGFQGNESTLVLLLNA 259
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSW 146
CG L+EG H+ +I+T ++ +AL+DMY KC+ V A +F +S +N V+W
Sbjct: 260 CGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTW 319
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALV 206
M++ + +G E +++F M + PD+ T V+ C + +G ++ +
Sbjct: 320 NVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLM-- 377
Query: 207 SGLISFVTVSN-----ALVSLYGKCGSIEDCHRLFSEMTFKD----EVSWTALVSAYSQF 257
+ F N + +LY G E+ + +D W L+S+ S+F
Sbjct: 378 --VDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSS-SRF 434
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIG---VLSVCSRTRLVEKGNQIFESMTKEH--GII 312
N T L ES+ ++ D + + ++++ S T E N++ E M KE G I
Sbjct: 435 -TGNPT--LGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVRE-MVKERKIGRI 490
Query: 313 P 313
P
Sbjct: 491 P 491
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 123/284 (43%), Gaps = 40/284 (14%)
Query: 98 QAHSYIIKTG-FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQN 156
Q H+ +I +G F D+ +A L R S+ TV S + + Y +
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKS---SSRFGDSSYTVSIYRSIGKLYCANPVFKAYLVS 96
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
++A+ + D+ ++G VPD +T S+IS ++ G HG A+ G + V
Sbjct: 97 SSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQ 156
Query: 217 NALVSLYGKCGSIE-------------------------------DCHRLFSEMTFKDEV 245
N+L+ +Y CG+++ H+LF EM K+ +
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 246 SWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESM 305
SW ++SAY +I LF M+ G + ++ T + +L+ C R+ +++G + S+
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 306 TKE--HGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+ + + I + +ID++ + + AR + + R+ V
Sbjct: 277 IRTFLNSSVVID---TALIDMYGKCKEVGLARRIFDSLSIRNKV 317
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 131/266 (49%), Gaps = 36/266 (13%)
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN---------------------- 142
K GF+ ++Y +ALV MY ++ A VF EM +N
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 143 ---------VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVV-PDDFTLGSVISSCGNLA 192
VVSWT ++ GY + +EA+ +F M + P++ T+ +++ + NL
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 193 SLEEGAQFHGIALVSGLISF-VTVSNALVSLYGKCGSIEDCHRLFSEMT--FKDEVSWTA 249
L+ H G + + V+N+L+ Y KCG I+ + F E+ K+ VSWT
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 250 LVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGN-QIFESMTKE 308
++SA++ G E + +F+ M GLKP++VT I VL+ CS L E+ + F +M E
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 309 HGIIPIQDHYSCIIDLFSRAGRLEEA 334
+ I P HY C++D+ R GRLEEA
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEA 416
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 129/249 (51%), Gaps = 11/249 (4%)
Query: 37 MRERDSISWTSMISGCTQNGLHREAIDVFREMRS-EMLETDQYTFGSMLTACGGVMALQE 95
M R +SWT++I G + +EAI +F M + + ++ ++ T ++L A + L+
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 96 GNQAHSYIIKTGFKD-NIYAGSALVDMYCKCRSVKSAETVFKEMS--YKNVVSWTAMLVG 152
H+Y+ K GF +I ++L+D Y KC ++SA F E+ KN+VSWT M+
Sbjct: 275 CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISA 334
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSC--GNLASLEEGAQFHGIALVSGLI 210
+ +G +EAV +F DM++ G+ P+ T+ SV+++C G LA E F+ + +
Sbjct: 335 FAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKIT 394
Query: 211 SFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDE-VSWTALVSAYSQFGKA----NETIR 265
V LV + + G +E+ ++ E+ +++ V W L+ A S + A T +
Sbjct: 395 PDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRK 454
Query: 266 LFESMLTHG 274
L E +HG
Sbjct: 455 LMELERSHG 463
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 151/324 (46%), Gaps = 41/324 (12%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
G+ ++D+ +F M E+D++SW ++++ C++NG + F +M + D T+
Sbjct: 203 GKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVTY- 257
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
+ L+D + K +A V +M
Sbjct: 258 ----------------------------------NELIDAFVKSGDFNNAFQVLSDMPNP 283
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
N SW +L GY + S EA + F M GV D+++L V+++ LA + G+ H
Sbjct: 284 NSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIH 343
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKAN 261
A GL S V V++AL+ +Y KCG ++ +F M K+ + W ++S Y++ G +
Sbjct: 344 ACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSI 403
Query: 262 ETIRLFESMLTHG-LKPDKVTFIGVLSVCSRTRL-VEKGNQIFESMTKEHGIIPIQDHYS 319
E I+LF + LKPD+ TF+ +L+VCS + +E FE M E+ I P +H
Sbjct: 404 EAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCC 463
Query: 320 CIIDLFSRAGRLEEARDFINQMLF 343
+I + G + +A+ I + F
Sbjct: 464 SLIRAMGQRGEVWQAKQVIQEFGF 487
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 143/304 (47%), Gaps = 17/304 (5%)
Query: 42 SISWTSMISGCTQNGLHREAIDVFR---EMRSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
S SW++++ + G +I V R E+ ++ + D +L G + Q
Sbjct: 21 SNSWSTIVPALARFG----SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQ 76
Query: 99 AHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGY 158
H Y+ K GF N ++L+ Y S++ A VF EM +V+SW +++ GY Q+G
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGL-ISFVTVSN 217
+E + +F ++ + V P++F+ + +++C L GA H + GL V V N
Sbjct: 137 FQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN 196
Query: 218 ALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKP 277
L+ +YGKCG ++D +F M KD VSW A+V++ S+ GK + F M P
Sbjct: 197 CLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----P 252
Query: 278 DKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDF 337
D VT+ ++ ++ Q+ M P ++ I+ + + + EA +F
Sbjct: 253 DTVTYNELIDAFVKSGDFNNAFQVLSDMPN-----PNSSSWNTILTGYVNSEKSGEATEF 307
Query: 338 INQM 341
+M
Sbjct: 308 FTKM 311
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 135/309 (43%), Gaps = 41/309 (13%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+ED+ ++F +M + D ISW S++SG Q+G +E I +F E+ + ++++F + L A
Sbjct: 106 LEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAA 165
Query: 87 CGGVMALQEGNQAHSYIIKTGF-KDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS 145
C + G HS ++K G K N+ G+ L+DMY KC + A VF+ M K+ VS
Sbjct: 166 CARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVS 225
Query: 146 WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIAL 205
W A++ +NG E + F M PD T
Sbjct: 226 WNAIVASCSRNGKLELGLWFFHQMPN----PDTVTY------------------------ 257
Query: 206 VSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIR 265
N L+ + K G + ++ S+M + SW +++ Y K+ E
Sbjct: 258 -----------NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATE 306
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
F M + G++ D+ + + ++ V + + + G+ S +ID++
Sbjct: 307 FFTKMHSSGVRFDEYS-LSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMY 365
Query: 326 SRAGRLEEA 334
S+ G L+ A
Sbjct: 366 SKCGMLKHA 374
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 13/218 (5%)
Query: 145 SWTAM---LVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
SW+ + L +G G AV++ D +K PD L ++ GN + Q H
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGEK----PDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKAN 261
G G +S +SN+L+ Y S+ED H++F EM D +SW +LVS Y Q G+
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 262 ETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK---EHGIIPIQDHY 318
E I LF + + P++ +F L+ C+R L G I + K E G + + +
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN-- 196
Query: 319 SCIIDLFSRAGRLEEARDFINQMLFRDSVLMQLVGQPC 356
C+ID++ + G +++A M +D+V + C
Sbjct: 197 -CLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASC 233
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 4/228 (1%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
Q+ DM +S SW ++++G + EA + F +M S + D+Y+ +L A +
Sbjct: 275 QVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALA 334
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLV 151
+ G+ H+ K G + SAL+DMY KC +K AE +F M KN++ W M+
Sbjct: 335 VVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMIS 394
Query: 152 GYGQNGYSEEAVKIFCDM-QKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLI 210
GY +NG S EA+K+F + Q+ + PD FT ++++ C + E + +++
Sbjct: 395 GYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYR 454
Query: 211 SFVTVSN--ALVSLYGKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYS 255
+V + +L+ G+ G + ++ E F D V+W AL+ A S
Sbjct: 455 IKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACS 502
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 92/175 (52%)
Query: 173 GVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDC 232
G +PD + SC NL SLE + H L S ++N ++S++G+C SI D
Sbjct: 231 GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDA 290
Query: 233 HRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRT 292
R+F M KD SW ++ AYS G ++ + LFE M HGLKP++ TF+ V C+
Sbjct: 291 KRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATV 350
Query: 293 RLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
+E+ F+SM EHGI P +HY ++ + + G L EA +I + F +
Sbjct: 351 GGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 126/279 (45%), Gaps = 20/279 (7%)
Query: 54 QNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIY 113
Q L+++AI E+ + D+ F + +C + +L+ + H + +++ F+ +
Sbjct: 217 QRRLYKDAI----ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPK 272
Query: 114 AGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYG 173
+ ++ M+ +C S+ A+ VF M K++ SW M+ Y NG ++A+ +F +M K+G
Sbjct: 273 LNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG 332
Query: 174 VVPDDFTLGSVISSCGNLASLEEG-AQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDC 232
+ P++ T +V +C + +EE F + G+ ++ + GKCG + +
Sbjct: 333 LKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEA 392
Query: 233 HRLFSEMTFKDEVS-WTALVSAYSQFGKANETIRLFESM---------LTHGLKPDKVTF 282
+ ++ F+ W A+ + G + + E M + P +F
Sbjct: 393 EQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSF 452
Query: 283 IGVLSVCSRTRLVEKGNQIF-----ESMTKEHGIIPIQD 316
V S++R++E N F + M + G++ + D
Sbjct: 453 KETNMVTSKSRILEFRNLTFYKDEAKEMAAKKGVVYVPD 491
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 163/346 (47%), Gaps = 16/346 (4%)
Query: 22 GRLLMIEDSRQLFCDMRE----RDSISWTSMISGCTQNGLH-REAIDVFREMRSEMLETD 76
GR + E++ +F M+E + +++ ++I C + G+ ++ F EM+ ++ D
Sbjct: 279 GRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPD 338
Query: 77 QYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK 136
+ TF S+L C + + + ++++ + L+D CK + A +
Sbjct: 339 RITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILA 398
Query: 137 EMSYK----NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLA 192
+M K NVVS++ ++ G+ + G +EA+ +F +M+ G+ D + +++S +
Sbjct: 399 QMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVG 458
Query: 193 SLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEM----TFKDEVSWT 248
EE G+ V NAL+ YGK G ++ ++F+EM + ++++
Sbjct: 459 RSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYS 518
Query: 249 ALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKE 308
L+ YS+ G E + +F + GL+ D V + ++ + LV + + MTKE
Sbjct: 519 TLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE 578
Query: 309 HGIIPIQDHYSCIIDLFSRAGRLEEARDFIN--QMLFRDSVLMQLV 352
GI P Y+ IID F R+ ++ + D+ N + F S L L
Sbjct: 579 -GISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALT 623
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 135/294 (45%), Gaps = 57/294 (19%)
Query: 107 GFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS----YKNVVSWTAMLVGYGQNGYS-EE 161
G+ + +YA SAL+ Y + + A +VF M N+V++ A++ G+ G ++
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 162 AVKIFCDMQKYGVVPDDFTLGSVISSCGN-----------------------------LA 192
K F +MQ+ GV PD T S+++ C L
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 193 SLEEGAQ----FHGIA------LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF- 241
++ +G Q F +A ++ ++S+ TV + + K G ++ LF EM +
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV----IDGFAKAGRFDEALNLFGEMRYL 438
Query: 242 ---KDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKG 298
D VS+ L+S Y++ G++ E + + M + G+K D VT+ +L + ++
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 299 NQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA----RDFINQMLFRDSVL 348
++F M +EH ++P YS +ID +S+ G +EA R+F + L D VL
Sbjct: 499 KKVFTEMKREH-VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVL 551
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 47/320 (14%)
Query: 16 DSYLVLGRLLMIEDSRQLFCDMR----ERDSISWTSMISGCTQNGLHREAIDVFREMRSE 71
D + GR +++ LF +MR D +S+ +++S T+ G EA+D+ REM S
Sbjct: 417 DGFAKAGRF---DEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 72 MLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSA 131
++ D T+ ++L G E + + + + N+ S L+D Y K K A
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 132 ETVFKEMS----YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISS 187
+F+E +VV ++A++ +NG AV + +M K G+ P+ T S+I +
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Query: 188 CGNLASLEEGAQFHG---IALVSGLISFVTVS--NALVSLYGKCGS------IEDCHRLF 236
G A+++ A + + S +S +T + N ++ L+G+ + +DC
Sbjct: 594 FGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGM 653
Query: 237 SEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVE 296
E++ EV F M +KP+ VTF +L+ CSR E
Sbjct: 654 QELSCILEV---------------------FRKMHQLEIKPNVVTFSAILNACSRCNSFE 692
Query: 297 KGNQIFESM----TKEHGII 312
+ + E + K +G++
Sbjct: 693 DASMLLEELRLFDNKVYGVV 712
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 117/236 (49%), Gaps = 10/236 (4%)
Query: 115 GSALVDMYCKCRSVKSAETVFKEM---SYKNVV-SWTAMLVGYGQNGYSEEAVKIFCDMQ 170
SA++ + V A+ +F+ Y N V +++A++ YG++G EEA+ +F M+
Sbjct: 236 ASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK 295
Query: 171 KYGVVPDDFTLGSVISSCGNLA-SLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSI 229
+YG+ P+ T +VI +CG ++ A+F +G+ N+L+++ + G
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 230 EDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGV 285
E LF EMT + D S+ L+ A + G+ + + M + P+ V++ V
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 286 LSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+ ++ ++ +F M + GI + Y+ ++ ++++ GR EEA D + +M
Sbjct: 416 IDGFAKAGRFDEALNLFGEM-RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC--GGVMALQEG 96
+ D I++ S+++ C++ GL A ++F EM + +E D +++ ++L A GG M L
Sbjct: 336 QPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL--- 392
Query: 97 NQAHSYIIKTGFK---DNIYAGSALVDMYCKCRSVKSAETVFKEMSY------------- 140
A + + K N+ + S ++D + K A +F EM Y
Sbjct: 393 --AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 141 --------------------------KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGV 174
K+VV++ A+L GYG+ G +E K+F +M++ V
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHV 510
Query: 175 VPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHR 234
+P+ T ++I +E + +GL + V + +AL+ K G +
Sbjct: 511 LPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVS 570
Query: 235 LFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCS 290
L EMT + + V++ +++ A FG++ T+ G P + + L+
Sbjct: 571 LIDEMTKEGISPNVVTYNSIIDA---FGRS-ATMDRSADYSNGGSLPFSSSALSALTETE 626
Query: 291 RTRLVEKGNQIFESMTKEHGIIPIQD------HYSCIIDLFSRAGRLE 332
R++ Q+F +T E +D SCI+++F + +LE
Sbjct: 627 GNRVI----QLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLE 670
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 183 SVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT-- 240
++IS+ G + + A G + V +AL+S YG+ G E+ +F+ M
Sbjct: 238 AMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297
Query: 241 --FKDEVSWTALVSAYSQFG-KANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEK 297
+ V++ A++ A + G + + + F+ M +G++PD++TF +L+VCSR L E
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 298 GNQIFESMTKEH----------------------------------GIIPIQDHYSCIID 323
+F+ MT I+P YS +ID
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 324 LFSRAGRLEEARDFINQMLF 343
F++AGR +EA + +M +
Sbjct: 418 GFAKAGRFDEALNLFGEMRY 437
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTF-----KDEVSWTALVSAYSQFGKANETIRLFES 269
+++A++S G+ G + R+F E F +++AL+SAY + G E I +F S
Sbjct: 235 LASAMISTLGRYGKVTIAKRIF-ETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 270 MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAG 329
M +GL+P+ VT+ V+ C + + K F + +G+ P + ++ ++ + SR G
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 330 RLEEARDFINQMLFR 344
E AR+ ++M R
Sbjct: 354 LWEAARNLFDEMTNR 368
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 161/370 (43%), Gaps = 49/370 (13%)
Query: 20 VLGRLLMIEDSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREM------- 68
+LG+ + + +F ++E D S+TS+IS +G +REA++VF++M
Sbjct: 182 MLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKP 241
Query: 69 -----------------------------RSEMLETDQYTFGSMLTACGGVMALQEGNQA 99
+S+ + D YT+ +++T C QE Q
Sbjct: 242 TLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQV 301
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY----KNVVSWTAMLVGYGQ 155
+ GF + +AL+D+Y K K A V EM ++V++ +++ Y +
Sbjct: 302 FEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYAR 361
Query: 156 NGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTV 215
+G +EA+++ M + G PD FT +++S +E +G +
Sbjct: 362 DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICT 421
Query: 216 SNALVSLYGKCGSIEDCHRLFSEMTF----KDEVSWTALVSAYSQFGKANETIRLFESML 271
NA + +YG G + ++F E+ D V+W L++ + Q G +E +F+ M
Sbjct: 422 FNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 481
Query: 272 THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRL 331
G P++ TF ++S SR E+ ++ M + G+ P Y+ ++ +R G
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML-DAGVTPDLSTYNTVLAALARGGMW 540
Query: 332 EEARDFINQM 341
E++ + +M
Sbjct: 541 EQSEKVLAEM 550
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 150/346 (43%), Gaps = 46/346 (13%)
Query: 43 ISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSY 102
+++ S+IS ++G+ EA+++ +M + + D +T+ ++L+ ++
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE 409
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY----KNVVSWTAMLVGYGQNGY 158
+ G K NI +A + MY +F E++ ++V+W +L +GQNG
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNA 218
E +F +M++ G VP+ T ++IS+ S E+ + L +G+ ++ N
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 219 LVSLYGKCGSIEDCHRLFSEMT----FKDEVSWTALVSAYSQFGKA-------------- 260
+++ + G E ++ +EM +E+++ +L+ AY+ GK
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN-GKEIGLMHSLAEEVYSG 588
Query: 261 ----------------------NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKG 298
E R F + G PD T ++S+ R ++V K
Sbjct: 589 VIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKA 648
Query: 299 NQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFR 344
N + + M KE G P Y+ ++ + SR+ ++ + + ++L +
Sbjct: 649 NGVLDYM-KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK 693
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 138/317 (43%), Gaps = 16/317 (5%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHRE------AIDVFREMRSEMLETDQYTFGSMLT 85
+LF +++ + + +++ G H++ A D F + + D +++
Sbjct: 122 ELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIIS 181
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS----YK 141
G + + + + GF ++Y+ ++L+ + + A VFK+M
Sbjct: 182 MLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKP 241
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCD-MQKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
++++ +L +G+ G + + M+ G+ PD +T ++I+ C + +E AQ
Sbjct: 242 TLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQV 301
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF----KDEVSWTALVSAYSQ 256
+G NAL+ +YGK ++ ++ +EM V++ +L+SAY++
Sbjct: 302 FEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYAR 361
Query: 257 FGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQD 316
G +E + L M G KPD T+ +LS R VE IFE M + G P
Sbjct: 362 DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM-RNAGCKPNIC 420
Query: 317 HYSCIIDLFSRAGRLEE 333
++ I ++ G+ E
Sbjct: 421 TFNAFIKMYGNRGKFTE 437
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/345 (19%), Positives = 142/345 (41%), Gaps = 46/345 (13%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D ++W ++++ QNG+ E VF+EM+ ++ TF ++++A + ++ +
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS----YKNVVSWTAMLVGYGQN 156
++ G ++ + ++ + + +E V EM N +++ ++L Y N
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA-N 571
Query: 157 G-------------YS-----------------------EEAVKIFCDMQKYGVVPDDFT 180
G YS EA + F ++++ G PD T
Sbjct: 572 GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 181 LGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT 240
L S++S G + + G + N+L+ ++ + + E+
Sbjct: 632 LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL 691
Query: 241 FK----DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVE 296
K D +S+ ++ AY + + + R+F M G+ PD +T+ + + + E
Sbjct: 692 AKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFE 751
Query: 297 KGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+ + M K HG P Q+ Y+ I+D + + R +EA+ F+ +
Sbjct: 752 EAIGVVRYMIK-HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 98/218 (44%), Gaps = 5/218 (2%)
Query: 25 LMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSML 84
LM + +++ + E ++ +++ C++ L EA F E++ D T SM+
Sbjct: 577 LMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK--- 141
+ G + + N Y+ + GF ++ ++L+ M+ + +E + +E+ K
Sbjct: 637 SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK 696
Query: 142 -NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
+++S+ ++ Y +N +A +IF +M+ G+VPD T + I S + EE
Sbjct: 697 PDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGV 756
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSE 238
+ G N++V Y K +D +LF E
Sbjct: 757 VRYMIKHGCRPNQNTYNSIVDGYCKLNR-KDEAKLFVE 793
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 41/165 (24%)
Query: 219 LVSLYGKCGSIEDCHRLFS---EMTFK-DEVSWTALVSAYSQFGKANETIRLF------- 267
++S+ GK G + +F+ E F D S+T+L+SA++ G+ E + +F
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 268 -----------------------------ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKG 298
E M + G+ PD T+ +++ C R L ++
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 299 NQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLF 343
Q+FE M K G + Y+ ++D++ ++ R +EA +N+M+
Sbjct: 299 AQVFEEM-KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVL 342
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 127/265 (47%), Gaps = 15/265 (5%)
Query: 22 GRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM----RSEMLETDQ 77
GRL + +RQ+F M RD SW + GC + G + +A +F M + +
Sbjct: 137 GRL---DITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPS 193
Query: 78 YTFGSMLTACGGVMALQEGNQAHSYIIKTGFKD--NIYAGSALVDMYCKCRSVKSAETVF 135
+ G +L AC + + G Q H+ K GF D + Y +L+ Y + R ++ A V
Sbjct: 194 WILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVL 253
Query: 136 KEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASL- 194
++S N V+W A + + G +E ++ F +M +G+ + +V+ +C ++
Sbjct: 254 HQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGG 313
Query: 195 EEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS---WTALV 251
G Q H A+ G S + L+ +YGK G ++D ++F + KDE S W A+V
Sbjct: 314 RSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFK--SSKDETSVSCWNAMV 371
Query: 252 SAYSQFGKANETIRLFESMLTHGLK 276
++Y Q G E I+L M G+K
Sbjct: 372 ASYMQNGIYIEAIKLLYQMKATGIK 396
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 8/235 (3%)
Query: 63 DVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMY 122
D+ R M S L ++ + + + ++ +I+K+ + I + L+ M+
Sbjct: 74 DILRLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMH 133
Query: 123 CKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYG-----VVPD 177
C + +F M +++ SW + +G + G E+A +F M K+ +P
Sbjct: 134 VSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPS 193
Query: 178 DFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT--VSNALVSLYGKCGSIEDCHRL 235
+ LG V+ +C + E G Q H + G I +S +L+ YG+ +ED + +
Sbjct: 194 -WILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLV 252
Query: 236 FSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCS 290
+++ + V+W A V+ + G+ E IR F M HG+K + F VL CS
Sbjct: 253 LHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACS 307
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 8/179 (4%)
Query: 12 IRKWDSYL------VLGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVF 65
I + DSYL G +ED+ + + ++++W + ++ + G +E I F
Sbjct: 225 IDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDF 284
Query: 66 REMRSEMLETDQYTFGSMLTACGGVM-ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCK 124
EM + ++ + F ++L AC V + G Q H+ IK GF+ + L++MY K
Sbjct: 285 IEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGK 344
Query: 125 CRSVKSAETVFKEMSYKNVVS-WTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLG 182
VK AE VFK + VS W AM+ Y QNG EA+K+ M+ G+ D L
Sbjct: 345 YGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHDTLLN 403
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 157/316 (49%), Gaps = 23/316 (7%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT-ACGGVMALQEGNQA 99
+ +++T ++ +NG +A +F EMR +E+D + + S+++ C ++GN
Sbjct: 293 NKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNC------RKGNMK 346
Query: 100 HSYII-----KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV----VSWTAML 150
++++ + G + Y AL+D CK + +AE + EM K V V + ++
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406
Query: 151 VGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLI 210
GY + G +EA I+ M++ G D FT ++ S L +E Q+ ++ G +
Sbjct: 407 DGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWL-FRMMEGGV 465
Query: 211 SFVTVS-NALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIR 265
TVS L+ +Y K G++E+ RLF EM+ K + +++ ++ AY + GK E +
Sbjct: 466 KLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARK 525
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
L +M +G+ PD T+ ++ V++ ++F M + G+ Y+ +I
Sbjct: 526 LRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLK-GLDQNSVTYTVMISGL 584
Query: 326 SRAGRLEEARDFINQM 341
S+AG+ +EA ++M
Sbjct: 585 SKAGKSDEAFGLYDEM 600
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 47/254 (18%)
Query: 43 ISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSY 102
+ + ++I G + G+ EA ++ M + + D +T ++ + + E Q
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQNGY 158
+++ G K + + + L+D+YCK +V+ A+ +F EMS K N +++ M+ Y + G
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNA 218
+EA K+ +M+ G+ PD +T S+I
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLI--------------------------------- 546
Query: 219 LVSLYGKC--GSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLT 272
+G+C ++++ RLFSEM K + V++T ++S S+ GK++E L++ M
Sbjct: 547 ----HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKR 602
Query: 273 HGLKPDKVTFIGVL 286
G D + ++
Sbjct: 603 KGYTIDNKVYTALI 616
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 11/244 (4%)
Query: 107 GFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQNGYSEEA 162
G K Y + +++ Y K R E V K M N V++T ++ +NG +A
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDA 313
Query: 163 VKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSL 222
K+F +M++ G+ D S+IS +++ GL AL+
Sbjct: 314 EKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDG 373
Query: 223 YGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPD 278
K G + L +EM K +V + L+ Y + G +E +++ M G + D
Sbjct: 374 VCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD 433
Query: 279 KVTFIGVLSVCSRTRLVEKGNQ-IFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDF 337
T + S +R + ++ Q +F M E G+ Y+ +ID++ + G +EEA+
Sbjct: 434 VFTCNTIASCFNRLKRYDEAKQWLFRMM--EGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 338 INQM 341
+M
Sbjct: 492 FVEM 495
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 154/329 (46%), Gaps = 20/329 (6%)
Query: 29 DSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSML 84
D+ ++ +M+E+ D + S+I G ++ EA EM L+ + +T+G+ +
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 85 TACGGVMALQEGNQAHSYIIKT---GFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK 141
+ G + E A Y+ + G N + L++ YCK V A + ++ M +
Sbjct: 530 S---GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586
Query: 142 NVV----SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG 197
++ ++T ++ G +N ++A +IF +M+ G+ PD F+ G +I+ L ++++
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 198 AQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSA 253
+ + GL V + N L+ + + G IE L EM+ K + V++ ++
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 254 YSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIP 313
Y + G E RLF+ M GL PD + ++ C R VE+ IF T + G
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG--TNKKGCAS 764
Query: 314 IQDHYSCIIDLFSRAGRLEEARDFINQML 342
++ +I+ + G+ E + +N+++
Sbjct: 765 STAPFNALINWVFKFGKTELKTEVLNRLM 793
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 147/369 (39%), Gaps = 48/369 (13%)
Query: 21 LGRLLMIEDSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETD 76
L ++ +ED++ L +M D+ +++ +I G + A + EM S +
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK 346
Query: 77 QYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK 136
Y + + +++ +I +G A ++L++ YC+ ++V+ +
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406
Query: 137 EMSYKN---------------------------------------VVSWTAMLVGYGQNG 157
EM +N VV +T ++ + QN
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 158 YSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSN 217
+A+++ +M++ G+ PD F S+I ++E F + +GL
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 218 ALVSLYGKCGSIEDCHRLFSEM----TFKDEVSWTALVSAYSQFGKANETIRLFESMLTH 273
A +S Y + + EM ++V T L++ Y + GK E + SM+
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586
Query: 274 GLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEE 333
G+ D T+ +++ + V+ +IF M + GI P Y +I+ FS+ G +++
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREM-RGKGIAPDVFSYGVLINGFSKLGNMQK 645
Query: 334 ARDFINQML 342
A ++M+
Sbjct: 646 ASSIFDEMV 654
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 102/238 (42%), Gaps = 9/238 (3%)
Query: 113 YAGSALVDMYCKCRSVKSAETVFKEMSYKNVV----SWTAMLVGYGQNGYSEEAVKIFCD 168
Y L+D CK + ++ A+++ EM V +++ ++ G + ++ A + +
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 169 MQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGS 228
M +G+ + I +E+ + SGLI +L+ Y + +
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 229 IEDCHRLFSEMTFKDEV----SWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIG 284
+ + L EM ++ V ++ +V G + + + M+ G +P+ V +
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 285 VLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQML 342
++ + ++ + M KE GI P Y+ +I S+A R++EAR F+ +M+
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEM-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 150/317 (47%), Gaps = 10/317 (3%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREM-RSEMLETDQYTFGSMLT 85
++ ++ LF + + + + + ++I G +G +A V +M S + D T+ S++
Sbjct: 338 VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS----YK 141
+ + + G K N+Y+ + LVD +CK + A V EMS
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
N V + ++ + + EAV+IF +M + G PD +T S+IS + ++
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQF 257
+ G+++ N L++ + + G I++ +L +EM F+ DE+++ +L+ +
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH 317
G+ ++ LFE ML G P ++ +++ R+ +VE+ + + M G P
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL-RGSTPDIVT 636
Query: 318 YSCIIDLFSRAGRLEEA 334
++ +I+ RAGR+E+
Sbjct: 637 FNSLINGLCRAGRIEDG 653
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 152/341 (44%), Gaps = 24/341 (7%)
Query: 27 IEDSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGS 82
I+ + L DM + +S+ + ++I ++ EA+ + EM D TF
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN 142
++ + E + + ++ GF + L++ CK V +A+ +F +
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDM-QKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
+V + ++ G+ +G ++A + DM YG+VPD T S+I +EG
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI-----YGYWKEG--LV 405
Query: 202 GIALV-------SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF----KDEVSWTAL 250
G+AL G V LV + K G I++ + + +EM+ + V + L
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 251 VSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHG 310
+SA+ + + E + +F M G KPD TF ++S ++ + M E G
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE-G 524
Query: 311 IIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLMQL 351
++ Y+ +I+ F R G ++EAR +N+M+F+ S L ++
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 117/259 (45%), Gaps = 8/259 (3%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVM 91
++ D + +++ + +IS + EA+++FREM + + D YTF S+++ V
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 92 ALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWT 147
++ +I G N + L++ + + +K A + EM ++ + +++
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568
Query: 148 AMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS 207
+++ G + G ++A +F M + G P + + +I+ +EE +F ++
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 208 GLISFVTVSNALVSLYGKCGSIEDCHRLF----SEMTFKDEVSWTALVSAYSQFGKANET 263
G + N+L++ + G IED +F +E D V++ L+S + G +
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 264 IRLFESMLTHGLKPDKVTF 282
L + + G P+ T+
Sbjct: 689 CLLLDEGIEDGFVPNHRTW 707
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 98/220 (44%), Gaps = 8/220 (3%)
Query: 27 IEDSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGS 82
I ++ ++F +M + D ++ S+ISG + + A+ + R+M SE + + T+ +
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM---- 138
++ A ++E + + ++ G + ++L+ C+ V A ++F++M
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 139 SYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGA 198
+ +S ++ G ++G EEAV+ +M G PD T S+I+ +E+G
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 199 QFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSE 238
G+ N L+S K G + D L E
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDE 694
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 161/343 (46%), Gaps = 30/343 (8%)
Query: 20 VLGRLLMIEDSRQLFCDMRE----RDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
+LGR +++ ++F +M R S+T++I+ +NG + ++++ M++E +
Sbjct: 150 LLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISP 209
Query: 76 DQYTFGSMLTACG-------GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSV 128
T+ +++ AC G++ L + + G + +I + L+ C R +
Sbjct: 210 SILTYNTVINACARGGLDWEGLLGL------FAEMRHEGIQPDIVTYNTLLSA-CAIRGL 262
Query: 129 -KSAETVFKEMSYKNVV----SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGS 183
AE VF+ M+ +V +++ ++ +G+ E+ + +M G +PD +
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 184 VISSCGNLASLEEG-AQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEM--- 239
++ + S++E FH + +G + L++L+G+ G +D +LF EM
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQ-AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS 381
Query: 240 -TFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKG 298
T D ++ L+ + + G E + LF M+ ++PD T+ G++ C + L E
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDA 441
Query: 299 NQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+I + MT + I+P Y+ +I+ F +A EEA N M
Sbjct: 442 RKILQYMTA-NDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 139/314 (44%), Gaps = 13/314 (4%)
Query: 33 LFCDMR----ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACG 88
LF +MR + D +++ +++S C GL EA VFR M + D T+ ++ G
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFG 293
Query: 89 GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS----YKNVV 144
+ L++ + G +I + + L++ Y K S+K A VF +M N
Sbjct: 294 KLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 353
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
+++ +L +GQ+G ++ ++F +M+ PD T +I G +E
Sbjct: 354 TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 413
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEV----SWTALVSAYSQFGKA 260
+ + + ++ GK G ED ++ MT D V ++T ++ A+ Q
Sbjct: 414 VEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALY 473
Query: 261 NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC 320
E + F +M G P TF +L +R LV++ I + + GI +D ++
Sbjct: 474 EEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV-DSGIPRNRDTFNA 532
Query: 321 IIDLFSRAGRLEEA 334
I+ + + G+ EEA
Sbjct: 533 QIEAYKQGGKFEEA 546
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 41/163 (25%)
Query: 219 LVSLYGKCGSIEDCHRLFSEMTF----KDEVSWTALVSAYSQFGK-----------ANET 263
++SL G+ G ++ C +F EM + S+TAL++AY + G+ NE
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK 206
Query: 264 IR-------------------------LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKG 298
I LF M G++PD VT+ +LS C+ L ++
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA 266
Query: 299 NQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+F +M + GI+P YS +++ F + RLE+ D + +M
Sbjct: 267 EMVFRTMN-DGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEM 308
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 147/310 (47%), Gaps = 9/310 (2%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D IS++++++G + G + + M+ + L+ + Y +GS++ + L E +A
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQN 156
S +I+ G + + L+D +CK +++A F EM + +V+++TA++ G+ Q
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
G EA K+F +M G+ PD T +I+ +++ + H + +G V
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 217 NALVSLYGKCGSIEDCHRLFSEM----TFKDEVSWTALVSAYSQFGKANETIRLFESMLT 272
L+ K G ++ + L EM + ++ ++V+ + G E ++L
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 273 HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLE 332
GL D VT+ ++ ++ ++K +I + M + G+ P ++ +++ F G LE
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLE 578
Query: 333 EARDFINQML 342
+ +N ML
Sbjct: 579 DGEKLLNWML 588
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 152/327 (46%), Gaps = 13/327 (3%)
Query: 27 IEDSRQLFCDMRERD----SISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGS 82
I + + F +M RD +++T++ISG Q G EA +F EM + LE D TF
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM---- 138
++ +++ + H+++I+ G N+ + L+D CK + SA + EM
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 139 SYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGA 198
N+ ++ +++ G ++G EEAVK+ + + G+ D T +++ + +++
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 199 QFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAY 254
+ L GL + N L++ + G +ED +L + M K + ++ +LV Y
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 255 SQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPI 314
+++ M + G+ PD T+ ++ + R +++ +F+ M K G
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM-KGKGFSVS 665
Query: 315 QDHYSCIIDLFSRAGRLEEARDFINQM 341
YS +I F + + EAR+ +QM
Sbjct: 666 VSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 18/200 (9%)
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS-------GL 209
G EA ++F M YG+V SV S L L + A++ G+
Sbjct: 189 GLLREARRVFEKMLNYGLVL------SVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGV 242
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIR 265
V N ++ + G I++ H L M K D +S++ +V+ Y +FG+ ++ +
Sbjct: 243 CWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK 302
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
L E M GLKP+ + ++ + R + + + F M ++ GI+P Y+ +ID F
Sbjct: 303 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTTLIDGF 361
Query: 326 SRAGRLEEARDFINQMLFRD 345
+ G + A F +M RD
Sbjct: 362 CKRGDIRAASKFFYEMHSRD 381
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 147/310 (47%), Gaps = 9/310 (2%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D IS++++++G + G + + M+ + L+ + Y +GS++ + L E +A
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQN 156
S +I+ G + + L+D +CK +++A F EM + +V+++TA++ G+ Q
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
G EA K+F +M G+ PD T +I+ +++ + H + +G V
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 217 NALVSLYGKCGSIEDCHRLFSEM----TFKDEVSWTALVSAYSQFGKANETIRLFESMLT 272
L+ K G ++ + L EM + ++ ++V+ + G E ++L
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 273 HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLE 332
GL D VT+ ++ ++ ++K +I + M + G+ P ++ +++ F G LE
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLE 578
Query: 333 EARDFINQML 342
+ +N ML
Sbjct: 579 DGEKLLNWML 588
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 152/327 (46%), Gaps = 13/327 (3%)
Query: 27 IEDSRQLFCDMRERD----SISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGS 82
I + + F +M RD +++T++ISG Q G EA +F EM + LE D TF
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM---- 138
++ +++ + H+++I+ G N+ + L+D CK + SA + EM
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 139 SYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGA 198
N+ ++ +++ G ++G EEAVK+ + + G+ D T +++ + +++
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 199 QFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAY 254
+ L GL + N L++ + G +ED +L + M K + ++ +LV Y
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 255 SQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPI 314
+++ M + G+ PD T+ ++ + R +++ +F+ M K G
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM-KGKGFSVS 665
Query: 315 QDHYSCIIDLFSRAGRLEEARDFINQM 341
YS +I F + + EAR+ +QM
Sbjct: 666 VSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 18/200 (9%)
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVS-------GL 209
G EA ++F M YG+V SV S L L + A++ G+
Sbjct: 189 GLLREARRVFEKMLNYGLVL------SVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGV 242
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIR 265
V N ++ + G I++ H L M K D +S++ +V+ Y +FG+ ++ +
Sbjct: 243 CWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK 302
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
L E M GLKP+ + ++ + R + + + F M ++ GI+P Y+ +ID F
Sbjct: 303 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTTLIDGF 361
Query: 326 SRAGRLEEARDFINQMLFRD 345
+ G + A F +M RD
Sbjct: 362 CKRGDIRAASKFFYEMHSRD 381
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 136/290 (46%), Gaps = 12/290 (4%)
Query: 30 SRQLFCDMR----ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
S +L+C+MR + + ++T++++ + GL +A ++F +++ + LE D Y + +++
Sbjct: 305 SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALME 364
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV- 144
+ + S + G + + + + +VD Y + AE VF+EM +
Sbjct: 365 SYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP 424
Query: 145 ---SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
S +L Y + + I +M + GV PD F L S+++ G L + +
Sbjct: 425 TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKIL 484
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQF 257
+ ++ N L+++YGK G +E LF E+ K D V+WT+ + AYS+
Sbjct: 485 AEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRK 544
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK 307
+ + +FE M+ G PD T +LS CS VE+ + +M K
Sbjct: 545 KLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 594
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 139/349 (39%), Gaps = 52/349 (14%)
Query: 44 SWTSMISGCTQNGLHR--EAIDVFRE--MRSEMLETDQYTFGSMLTACGGVMALQEGNQA 99
SW +I+ Q L++ ++I + E +R + D F ++ A G +E
Sbjct: 140 SWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESL 199
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYG----- 154
+ ++++ + + L+ YC ++ AE V EM +V T + Y
Sbjct: 200 YVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEG 259
Query: 155 ---QNGYSEEAV-----------------------------------KIFCDMQKYGVVP 176
+ G +EEA+ K++C+M+ + P
Sbjct: 260 LMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKP 319
Query: 177 DDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLF 236
+ T +++++ E+ + GL V V NAL+ Y + G +F
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 379
Query: 237 SEMTF----KDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRT 292
S M D S+ +V AY + G ++ +FE M G+ P + + +LS S+
Sbjct: 380 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 439
Query: 293 RLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
R V K I + M+ E+G+ P + +++L+ R G+ + + +M
Sbjct: 440 RDVTKCEAIVKEMS-ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 487
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 139/310 (44%), Gaps = 11/310 (3%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D +++T ++ + G EA D MR + + + +T+ +++ V L + +
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQN 156
+ G K Y +D Y K SA F++M K N+V+ A L +
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
G EA +IF ++ G+VPD T ++ + ++E + + +G V V
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 217 NALVSLYGKCGSIEDCHRLF---SEMTFKDE-VSWTALVSAYSQFGKANETIRLFESMLT 272
N+L++ K +++ ++F EM K V++ L++ + GK E I LFE M+
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 273 HGLKPDKVTFIGVLS-VCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRL 331
G P+ +TF + +C + +F+ M + G +P Y+ II + G++
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM--DMGCVPDVFTYNTIIFGLVKNGQV 659
Query: 332 EEARDFINQM 341
+EA F +QM
Sbjct: 660 KEAMCFFHQM 669
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 131/307 (42%), Gaps = 9/307 (2%)
Query: 44 SWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYI 103
+++S++ G + + + +EM + L+ + YTF + G + E + +
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 104 IKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS----YKNVVSWTAMLVGYGQNGYS 159
G ++ + L+D C R + A+ VF++M + V++ +L + N
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 160 EEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNAL 219
+ + + +M+K G VPD T ++ + + E + G++ + N L
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Query: 220 VSLYGKCGSIEDCHRLFSEM----TFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGL 275
+ + ++D LF M ++ + Y + G + + FE M T G+
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
Query: 276 KPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEAR 335
P+ V L ++ + QIF + K+ G++P Y+ ++ +S+ G ++EA
Sbjct: 465 APNIVACNASLYSLAKAGRDREAKQIFYGL-KDIGLVPDSVTYNMMMKCYSKVGEIDEAI 523
Query: 336 DFINQML 342
+++M+
Sbjct: 524 KLLSEMM 530
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 125/298 (41%), Gaps = 36/298 (12%)
Query: 48 MISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTG 107
M+ +G E VF M+ +++ D T+ ++ + L++ A + + G
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183
Query: 108 FKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQNGYSEEAV 163
F N Y+ + L+ + K R A V++ M + ++ ++++++VG G+ + +
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVM 243
Query: 164 KIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLY 223
+ +M+ G+ P+ +T I G + E
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINE--------------------------- 276
Query: 224 GKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFI 283
+ E R+ E D V++T L+ A K + +FE M T KPD+VT+I
Sbjct: 277 ----AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYI 332
Query: 284 GVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+L S R ++ Q + M K+ G +P ++ ++D +AG EA D ++ M
Sbjct: 333 TLLDRFSDNRDLDSVKQFWSEMEKD-GHVPDVVTFTILVDALCKAGNFGEAFDTLDVM 389
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 116/254 (45%), Gaps = 10/254 (3%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEM-LETDQYTFGSMLTACGGVMALQEGN 97
E ++I+ +ISG + G +A+D++ ++ S+ T+G ++ L E
Sbjct: 852 EANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 911
Query: 98 QAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV----VSWTAMLVGY 153
Q ++ G + N + L++ + K +A +FK M + V +++ ++
Sbjct: 912 QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Query: 154 GQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG-AQFHGIALVSGLISF 212
G +E + F ++++ G+ PD +I+ G LEE F+ + G+
Sbjct: 972 CMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPD 1031
Query: 213 VTVSNALVSLYGKCGSIEDCHRLFSEMTF----KDEVSWTALVSAYSQFGKANETIRLFE 268
+ N+L+ G G +E+ ++++E+ + ++ AL+ YS GK +++
Sbjct: 1032 LYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1091
Query: 269 SMLTHGLKPDKVTF 282
+M+T G P+ T+
Sbjct: 1092 TMVTGGFSPNTGTY 1105
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 133/310 (42%), Gaps = 18/310 (5%)
Query: 14 KWDSY-LVLGRLL---MIEDSRQLFCDMRE----RDSISWTSMISGCTQNGLHREAIDVF 65
K +Y L++G LL MIE ++ +F ++ D ++ ++ ++G E +++
Sbjct: 784 KLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELY 843
Query: 66 REMRSEMLETDQYTFGSMLTACGGVMALQEG-NQAHSYIIKTGFKDNIYAGSALVDMYCK 124
+EM + E + T +++ + + + + + F L+D K
Sbjct: 844 KEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSK 903
Query: 125 CRSVKSAETVFKEM----SYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFT 180
+ A+ +F+ M N + ++ G+G+ G ++ A +F M K GV PD T
Sbjct: 904 SGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKT 963
Query: 181 LGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT 240
++ + ++EG + SGL V N +++ GK +E+ LF+EM
Sbjct: 964 YSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMK 1023
Query: 241 -----FKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLV 295
D ++ +L+ G E +++ + GL+P+ TF ++ S +
Sbjct: 1024 TSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKP 1083
Query: 296 EKGNQIFESM 305
E ++++M
Sbjct: 1084 EHAYAVYQTM 1093
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/366 (19%), Positives = 149/366 (40%), Gaps = 51/366 (13%)
Query: 27 IEDSRQLFCDMRE----RDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGS 82
++++ ++F M+E +++ ++++G +NG +EAI++F M + + TF +
Sbjct: 554 VDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 613
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS--- 139
+ + + ++ G +++ + ++ K VK A F +M
Sbjct: 614 LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLV 673
Query: 140 YKNVVSWTAMLVGYGQNGYSEEAVKIF------CDMQKYGVVPDDFTLGSVISSCG--NL 191
Y + V+ +L G + E+A KI C Q + +D +GS+++ G N
Sbjct: 674 YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL-IGSILAEAGIDNA 732
Query: 192 ASLEEGAQFHGI-----ALVSGLISF--------------------------VTVSNALV 220
S E +GI +++ +I + + N L+
Sbjct: 733 VSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLI 792
Query: 221 SLYGKCGSIEDCHRLFSEMT----FKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLK 276
+ IE +F ++ D ++ L+ AY + GK +E L++ M TH +
Sbjct: 793 GGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECE 852
Query: 277 PDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARD 336
+ +T V+S + V+ ++ + + P Y +ID S++GRL EA+
Sbjct: 853 ANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQ 912
Query: 337 FINQML 342
ML
Sbjct: 913 LFEGML 918
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 142/330 (43%), Gaps = 17/330 (5%)
Query: 27 IEDSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGS 82
I+++ +L +M E D I S+I+ + EA +F M+ L+ T+ +
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSA-ETVFKEMS-- 139
+L G +QE + +++ G N + L D CK V A + +FK M
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 140 -YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGA 198
+V ++ ++ G +NG +EA+ F M+K V PD TL +++ + +E+
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAY 697
Query: 199 Q-----FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSA 253
+ + A + + + ++++ G ++ RL + +D S +
Sbjct: 698 KIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 757
Query: 254 YS-QFGKANETIRLFESMLTH-GLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGI 311
YS + + LFE G++P T+ ++ ++E +F + K G
Sbjct: 758 YSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV-KSTGC 816
Query: 312 IPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
IP Y+ ++D + ++G+++E + +M
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 94/205 (45%), Gaps = 6/205 (2%)
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
+V ++ +L YG++G +E +++ +M + + T VIS ++++ +
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 202 GIALVSGLISFVTVS-NALVSLYGKCGSIEDCHRLFSEMT----FKDEVSWTALVSAYSQ 256
+ S + L+ K G + + +LF M + + L++ + +
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 257 FGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQD 316
G+A+ LF+ M+ G++PD T+ ++ V++G F+ + KE G+ P
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL-KESGLNPDVV 997
Query: 317 HYSCIIDLFSRAGRLEEARDFINQM 341
Y+ II+ ++ RLEEA N+M
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEM 1022
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 126/303 (41%), Gaps = 17/303 (5%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
+RD+ ++ ++ + G ++A R+MR + Y++ ++ E +
Sbjct: 150 KRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAME 209
Query: 99 AHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS----YKNVVSWTAMLVGYG 154
+ +I GF+ ++ S+L+ K R + S + KEM NV ++T + G
Sbjct: 210 VYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLG 269
Query: 155 QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ-FHGIAL---VSGLI 210
+ G EA +I M G PD T +I + L+ + F + +
Sbjct: 270 RAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRV 329
Query: 211 SFVTVSNALVSLYGKCGSIEDCHRLFSEMT----FKDEVSWTALVSAYSQFGKANETIRL 266
+++T L+ + ++ + +SEM D V++T LV A + G E
Sbjct: 330 TYIT----LLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
+ M G+ P+ T+ ++ R ++ ++F +M + G+ P Y ID +
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM-ESLGVKPTAYTYIVFIDYYG 444
Query: 327 RAG 329
++G
Sbjct: 445 KSG 447
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 8/250 (3%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D +S+ ++ISGC EA EM L+ D YT+ ++ + ++E Q
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV----VSWTAMLVGYGQN 156
+ G ++Y S ++D CK + + F EM KNV V + ++ Y ++
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 658
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
G A+++ DM+ G+ P+ T S+I ++ +EE + GL V
Sbjct: 659 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLT 272
AL+ YGK G + L EM K +++++T ++ Y++ G E RL M
Sbjct: 719 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778
Query: 273 HGLKPDKVTF 282
G+ PD +T+
Sbjct: 779 KGIVPDSITY 788
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 143/343 (41%), Gaps = 44/343 (12%)
Query: 42 SISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSM------------------ 83
S ++ ++I G +NG A + +EM S +Q +F S+
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459
Query: 84 ------LTACGGVMAL------QEGNQAHSY-----IIKTGFKDNIYAGSALVDMYCKCR 126
++ GG++ + G + + + GF + +AL+ C+
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 519
Query: 127 SVKSAETVFKEMSYK----NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLG 182
+ A + KE+ + + VS+ ++ G +EA +M K G+ PD++T
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 579
Query: 183 SVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK 242
+I N+ +EE QF +G++ V + ++ K E+ F EM K
Sbjct: 580 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 243 D----EVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKG 298
+ V + L+ AY + G+ + + L E M G+ P+ T+ ++ S VE+
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 699
Query: 299 NQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+FE M E G+ P HY+ +ID + + G++ + + +M
Sbjct: 700 KLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 136/311 (43%), Gaps = 9/311 (2%)
Query: 43 ISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSY 102
I+++ ++ G T+ +A V +EM + + + +++ + +L + +
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 390
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS----YKNVVSWTAMLVGYGQNGY 158
++ G + L+ YCK +AE + KEM N S+T+++ +
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 450
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNA 218
+ A++ +M + P L ++IS + + L G + SNA
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 219 LVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
L+ + G +++ R+ E+ + D VS+ L+S K +E + M+ G
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 275 LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
LKPD T+ ++ VE+ Q ++ K +G++P YS +ID +A R EE
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDD-CKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 335 RDFINQMLFRD 345
++F ++M+ ++
Sbjct: 630 QEFFDEMMSKN 640
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 5/208 (2%)
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
+V +T + + + G EEAVK+F M++ GV P+ T +VI G +E F
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQF 257
+ G+ + + LV + I D + + EMT K + + + L+ ++ +
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH 317
G N+ I + + M++ GL T+ ++ + + ++ + M G Q
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML-SIGFNVNQGS 437
Query: 318 YSCIIDLFSRAGRLEEARDFINQMLFRD 345
++ +I L + A F+ +ML R+
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRN 465
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 128/309 (41%), Gaps = 13/309 (4%)
Query: 43 ISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSY 102
I + ++I + G +AI++ M S+ L T+ +++ +
Sbjct: 366 IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE 425
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS----WTAMLVGYGQNGY 158
++ GF N + ++++ + C SA EM +N+ T ++ G ++G
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 485
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNA 218
+A++++ G V D T +++ L+E + L G + N
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545
Query: 219 LVSLYGKCGS--IEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLT 272
L+S G CG +++ EM + D +++ L+ K E I+ ++
Sbjct: 546 LIS--GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 273 HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLE 332
+G+ PD T+ ++ C + E+G + F+ M ++ + P Y+ +I + R+GRL
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN-VQPNTVVYNHLIRAYCRSGRLS 662
Query: 333 EARDFINQM 341
A + M
Sbjct: 663 MALELREDM 671
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 98/234 (41%), Gaps = 9/234 (3%)
Query: 61 AIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVD 120
A+DVF + ++ + + T +LT+ Q+ +A + K G ++Y + ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 268
Query: 121 MYCKCRSVKSAETVFKEMS----YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVP 176
+CK V+ A +F +M NVV++ ++ G G G +EA M + G+ P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 177 DDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLF 236
T ++ + + G V V N L+ + + GS+ +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 237 SEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVL 286
M K ++ L+ Y + G+A+ RL + ML+ G ++ +F V+
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 8/250 (3%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D +S+ ++ISGC EA EM L+ D YT+ ++ + ++E Q
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV----VSWTAMLVGYGQN 156
+ G ++Y S ++D CK + + F EM KNV V + ++ Y ++
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 658
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
G A+++ DM+ G+ P+ T S+I ++ +EE + GL V
Sbjct: 659 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLT 272
AL+ YGK G + L EM K +++++T ++ Y++ G E RL M
Sbjct: 719 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778
Query: 273 HGLKPDKVTF 282
G+ PD +T+
Sbjct: 779 KGIVPDSITY 788
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 143/343 (41%), Gaps = 44/343 (12%)
Query: 42 SISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSM------------------ 83
S ++ ++I G +NG A + +EM S +Q +F S+
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459
Query: 84 ------LTACGGVMAL------QEGNQAHSY-----IIKTGFKDNIYAGSALVDMYCKCR 126
++ GG++ + G + + + GF + +AL+ C+
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 519
Query: 127 SVKSAETVFKEMSYK----NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLG 182
+ A + KE+ + + VS+ ++ G +EA +M K G+ PD++T
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 579
Query: 183 SVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK 242
+I N+ +EE QF +G++ V + ++ K E+ F EM K
Sbjct: 580 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 243 D----EVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKG 298
+ V + L+ AY + G+ + + L E M G+ P+ T+ ++ S VE+
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 699
Query: 299 NQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+FE M E G+ P HY+ +ID + + G++ + + +M
Sbjct: 700 KLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 136/311 (43%), Gaps = 9/311 (2%)
Query: 43 ISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSY 102
I+++ ++ G T+ +A V +EM + + + +++ + +L + +
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 390
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS----YKNVVSWTAMLVGYGQNGY 158
++ G + L+ YCK +AE + KEM N S+T+++ +
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 450
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNA 218
+ A++ +M + P L ++IS + + L G + SNA
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 219 LVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
L+ + G +++ R+ E+ + D VS+ L+S K +E + M+ G
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 275 LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
LKPD T+ ++ VE+ Q ++ K +G++P YS +ID +A R EE
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDD-CKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 335 RDFINQMLFRD 345
++F ++M+ ++
Sbjct: 630 QEFFDEMMSKN 640
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 5/208 (2%)
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
+V +T + + + G EEAVK+F M++ GV P+ T +VI G +E F
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQF 257
+ G+ + + LV + I D + + EMT K + + + L+ ++ +
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH 317
G N+ I + + M++ GL T+ ++ + + ++ + M G Q
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML-SIGFNVNQGS 437
Query: 318 YSCIIDLFSRAGRLEEARDFINQMLFRD 345
++ +I L + A F+ +ML R+
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRN 465
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 128/309 (41%), Gaps = 13/309 (4%)
Query: 43 ISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSY 102
I + ++I + G +AI++ M S+ L T+ +++ +
Sbjct: 366 IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE 425
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVS----WTAMLVGYGQNGY 158
++ GF N + ++++ + C SA EM +N+ T ++ G ++G
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 485
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNA 218
+A++++ G V D T +++ L+E + L G + N
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545
Query: 219 LVSLYGKCGS--IEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLT 272
L+S G CG +++ EM + D +++ L+ K E I+ ++
Sbjct: 546 LIS--GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 273 HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLE 332
+G+ PD T+ ++ C + E+G + F+ M ++ + P Y+ +I + R+GRL
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN-VQPNTVVYNHLIRAYCRSGRLS 662
Query: 333 EARDFINQM 341
A + M
Sbjct: 663 MALELREDM 671
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 98/234 (41%), Gaps = 9/234 (3%)
Query: 61 AIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVD 120
A+DVF + ++ + + T +LT+ Q+ +A + K G ++Y + ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 268
Query: 121 MYCKCRSVKSAETVFKEMS----YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVP 176
+CK V+ A +F +M NVV++ ++ G G G +EA M + G+ P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 177 DDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLF 236
T ++ + + G V V N L+ + + GS+ +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 237 SEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVL 286
M K ++ L+ Y + G+A+ RL + ML+ G ++ +F V+
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 136/290 (46%), Gaps = 12/290 (4%)
Query: 30 SRQLFCDMR----ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLT 85
S +L+C+MR + + ++T++++ + GL +A ++F +++ + LE D Y + +++
Sbjct: 283 SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALME 342
Query: 86 ACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVV- 144
+ + S + G + + + + +VD Y + AE VF+EM +
Sbjct: 343 SYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP 402
Query: 145 ---SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
S +L Y + + I +M + GV PD F L S+++ G L + +
Sbjct: 403 TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKIL 462
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQF 257
+ ++ N L+++YGK G +E LF E+ K D V+WT+ + AYS+
Sbjct: 463 AEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRK 522
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTK 307
+ + +FE M+ G PD T +LS CS VE+ + +M K
Sbjct: 523 KLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 572
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 139/349 (39%), Gaps = 52/349 (14%)
Query: 44 SWTSMISGCTQNGLHR--EAIDVFRE--MRSEMLETDQYTFGSMLTACGGVMALQEGNQA 99
SW +I+ Q L++ ++I + E +R + D F ++ A G +E
Sbjct: 118 SWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESL 177
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYG----- 154
+ ++++ + + L+ YC ++ AE V EM +V T + Y
Sbjct: 178 YVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEG 237
Query: 155 ---QNGYSEEAV-----------------------------------KIFCDMQKYGVVP 176
+ G +EEA+ K++C+M+ + P
Sbjct: 238 LMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKP 297
Query: 177 DDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLF 236
+ T +++++ E+ + GL V V NAL+ Y + G +F
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 357
Query: 237 SEMTF----KDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRT 292
S M D S+ +V AY + G ++ +FE M G+ P + + +LS S+
Sbjct: 358 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 417
Query: 293 RLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
R V K I + M+ E+G+ P + +++L+ R G+ + + +M
Sbjct: 418 RDVTKCEAIVKEMS-ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 465
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 158/343 (46%), Gaps = 25/343 (7%)
Query: 23 RLLMIEDSRQLFCDMR----ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQY 78
+L I+D +L M E + IS+ +I+G + G +E V EM D+
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 79 TFGSMLTA-CGGVMALQEGN--QA---HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAE 132
T+ +++ C +EGN QA H+ +++ G ++ ++L+ CK ++ A
Sbjct: 312 TYNTLIKGYC------KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 133 TVFKEMSYK----NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSC 188
+M + N ++T ++ G+ Q GY EA ++ +M G P T ++I+
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 189 GNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DE 244
+E+ GL V + ++S + + +++ R+ EM K D
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 245 VSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFES 304
+++++L+ + + + E L+E ML GL PD+ T+ +++ +EK Q+
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 305 MTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
M E G++P YS +I+ ++ R EA+ + ++ + +SV
Sbjct: 546 MV-EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 134/303 (44%), Gaps = 21/303 (6%)
Query: 61 AIDVFREMRSEMLETDQYTFGSMLTA---CGGV-MALQEGNQAHSYIIKTGFKDNIYAGS 116
A +VF+EM + + +T+ ++ G + +AL ++ + G N+ +
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET----KGCLPNVVTYN 244
Query: 117 ALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKY 172
L+D YCK R + + + M+ K N++S+ ++ G + G +E + +M +
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Query: 173 GVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDC 232
G D+ T ++I + + H L GL V +L+ K G++
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 233 HRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSV 288
+M + +E ++T LV +SQ G NE R+ M +G P VT+ +++
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 289 CSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA----RDFINQMLFR 344
T +E + E M KE G+ P YS ++ F R+ ++EA R+ + + +
Sbjct: 425 HCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP 483
Query: 345 DSV 347
D++
Sbjct: 484 DTI 486
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 122/253 (48%), Gaps = 16/253 (6%)
Query: 98 QAHSYIIKTGFKDNIYAGSALVDMYCKC-RSVKSAETVFKEM----SYKNVVSWTAMLVG 152
QAH GF + + +A++D + R++ AE VFKEM NV ++ ++ G
Sbjct: 161 QAH------GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRG 214
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISF 212
+ G + A+ +F M+ G +P+ T ++I L +++G + + GL
Sbjct: 215 FCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN 274
Query: 213 VTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFE 268
+ N +++ + G +++ + +EM + DEV++ L+ Y + G ++ + +
Sbjct: 275 LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
ML HGL P +T+ ++ + + + + + M + G+ P + Y+ ++D FS+
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM-RVRGLCPNERTYTTLVDGFSQK 393
Query: 329 GRLEEARDFINQM 341
G + EA + +M
Sbjct: 394 GYMNEAYRVLREM 406
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 140/326 (42%), Gaps = 32/326 (9%)
Query: 44 SWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYI 103
++T+++ G +Q G EA V REM T+ +++ +++ +
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 104 IKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV----VSWTAMLVGYGQNGYS 159
+ G ++ + S ++ +C+ V A V +EM K + +++++++ G+ + +
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 160 EEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNAL 219
+EA ++ +M + G+ PD+FT ++I++ LE+ Q H + G++ V + L
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 220 VSLYGKCGSIEDCHRLFSEMTFKDEV-------------------SWTALVSAYSQFGKA 260
++ K + RL ++ +++ V S +L+ + G
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621
Query: 261 NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKE----HGIIPIQD 316
E ++FESML KPD + ++ R + K +++ M K H + I
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVI-- 679
Query: 317 HYSCIIDLFSRAGRLEEARDFINQML 342
++ + G++ E I +L
Sbjct: 680 ---ALVKALHKEGKVNELNSVIVHVL 702
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 128/277 (46%), Gaps = 31/277 (11%)
Query: 27 IEDSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGS 82
+ED+ + DM+E+ D +S+++++SG ++ EA+ V REM + ++ D T+ S
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK- 141
++ +E + +++ G + + +AL++ YC ++ A + EM K
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 142 ---NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNL-----AS 193
+VV+++ ++ G + + EA ++ + VP D T ++I +C N+ S
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 194 LEEGAQFHGIALVSGLI--SFV--------TVSNALVSLYGKCGSIEDCHRLFSEMT--- 240
L +G G+ + + S + T N ++ + + G I + L+ EM
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 241 -FKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLK 276
V+ ALV A + GK NE S++ H L+
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNE----LNSVIVHVLR 703
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%)
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
G ++AV+I + G V D L + CG+ +L+E H S IS ++
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAY 219
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLK 276
N+++ +Y CGS+ED +F+ M ++ +W ++ +++ G+ + I F G K
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 277 PDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARD 336
PD F + C + +G FESM KE+GIIP +HY ++ + + G L+EA
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 337 FINQM 341
F+ M
Sbjct: 340 FVESM 344
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 2/195 (1%)
Query: 59 REAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSAL 118
++A+++ + R+E D + CG ALQE H +I + +I A +++
Sbjct: 163 KKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSI 222
Query: 119 VDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDD 178
++MY C SV+ A TVF M +N+ +W ++ + +NG E+A+ F ++ G PD
Sbjct: 223 IEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDG 282
Query: 179 FTLGSVISSCGNLASLEEG-AQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFS 237
+ +CG L + EG F + G+I + +LV + + G +++ R
Sbjct: 283 EMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVE 342
Query: 238 EMTFKDEVSWTALVS 252
M ++ W L++
Sbjct: 343 SMEPNVDL-WETLMN 356
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 158/378 (41%), Gaps = 78/378 (20%)
Query: 45 WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYII 104
+ ++++ + GL E V+ EM + + + YT+ M+ + ++E NQ S I+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQNGYSE 160
+ G + + ++L+ YC+ + + SA VF EM K N V++T ++ G +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 161 EAVKIFC-----------------------------------DMQKYGVVPDDFTLGSVI 185
EA+ +F +M++ G+ P+ T +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 186 SSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDC------------- 232
S + E+ + G L GL+ V NAL++ Y K G IED
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 233 -------------------------HRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLF 267
+++ D V++ +L+ + G + RL
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSR 327
M GL PD+ T+ ++ +++ VE+ +F+S+ ++ G+ P Y+ +ID + +
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL-EQKGVNPNVVMYTALIDGYCK 544
Query: 328 AGRLEEARDFINQMLFRD 345
AG+++EA + +ML ++
Sbjct: 545 AGKVDEAHLMLEKMLSKN 562
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 137/332 (41%), Gaps = 37/332 (11%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D +++ S+I G ++G A + M L DQ+T+ SM+ + ++E
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNV----VSWTAMLVGYGQN 156
+ + G N+ +AL+D YCK V A + ++M KN +++ A++ G +
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
G +EA + M K G+ P T +I L++G H + ++S T
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRL-----LKDGDFDHAYSRFQQMLSSGTKP 635
Query: 217 NA-----LVSLYGKCGSIEDCHRLFSEM----TFKDEVSWTALVSAYSQFGKANETIRLF 267
+A + Y + G + D + ++M D ++++L+ Y G+ N +
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695
Query: 268 ESMLTHGLKPDKVTFIGVLS----------------VCSRTRLVEKGN--QIFESMTKEH 309
+ M G +P + TF+ ++ +C+ + ++E ++ E M EH
Sbjct: 696 KRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV-EH 754
Query: 310 GIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+ P Y +I G L A + M
Sbjct: 755 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 112/269 (41%), Gaps = 25/269 (9%)
Query: 17 SYLVLGRLLMIEDSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEM 72
+Y GRLL D+ + MRE D +++S+I G G A DV + MR
Sbjct: 646 TYCREGRLL---DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 73 LETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAE 132
E Q+TF S++ ++ ++ G Q G + + A S +++ V+ E
Sbjct: 703 CEPSQHTFLSLIKH---LLEMKYGKQK-------GSEPELCAMSNMMEFD---TVVELLE 749
Query: 133 TVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKY-GVVPDDFTLGSVISSCGNL 191
+ + N S+ +++G + G A K+F MQ+ G+ P + +++S C L
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 192 ASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT----FKDEVSW 247
E A+ + G + + L+ K G E +F + ++DE++W
Sbjct: 810 KKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAW 869
Query: 248 TALVSAYSQFGKANETIRLFESMLTHGLK 276
++ + G LF M +G K
Sbjct: 870 KIIIDGVGKQGLVEAFYELFNVMEKNGCK 898
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 165/339 (48%), Gaps = 18/339 (5%)
Query: 19 LVLGRLLMIEDSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEMLE 74
++L L E + Q+F DM++R D ++T MI + G EA+ +F EM +E L
Sbjct: 243 MLLDALAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLT 302
Query: 75 TDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMY-CKCRSVKSAET 133
+ + +++ + + Q S +++TG + N Y S L+++ + + V+
Sbjct: 303 LNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGV 362
Query: 134 VFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISS-CG--- 189
V Y ++ ++ + G+ EA ++FCDM + V + + S++ S CG
Sbjct: 363 VEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGK 422
Query: 190 NLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEM----TFKDEV 245
+ ++E ++ H +V+ + + TV +AL GK I H LF +M D
Sbjct: 423 TIEAIEMLSKIHEKGVVTDTMMYNTVFSAL----GKLKQISHIHDLFEKMKKDGPSPDIF 478
Query: 246 SWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESM 305
++ L++++ + G+ +E I +FE + KPD +++ +++ + V++ + F+ M
Sbjct: 479 TYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEM 538
Query: 306 TKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFR 344
+E G+ P YS +++ F + R+E A +ML +
Sbjct: 539 -QEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVK 576
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 129/298 (43%), Gaps = 57/298 (19%)
Query: 17 SYLV--LGRLLMIEDSRQLFCDM------RERDSISWTSMISGCTQNGLHREAIDVFREM 68
SYLV L +L + ++ +LFCDM ERDS + SM+ G EAI++ ++
Sbjct: 376 SYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDS--YMSMLESLCGAGKTIEAIEMLSKI 433
Query: 69 RSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSV 128
+ + TD + ++ +A G + + + + K G +I+ + L+ + + V
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEV 493
Query: 129 KSAETVFKEMSY----KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSV 184
A +F+E+ +++S+ +++ G+NG +EA F +MQ+ G+ PD
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPD------- 546
Query: 185 ISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK-- 242
V + L+ +GK +E + LF EM K
Sbjct: 547 ----------------------------VVTYSTLMECFGKTERVEMAYSLFEEMLVKGC 578
Query: 243 --DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKG 298
+ V++ L+ + G+ E + L+ M GL PD +T+ +V R + V G
Sbjct: 579 QPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITY----TVLERLQSVSHG 632
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 157/314 (50%), Gaps = 9/314 (2%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
E D+I+++++++G G EA+ + M D T +++ + E
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 99 AHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN----VVSWTAMLVGYG 154
+++ GF+ + +++ CK + A +F++M +N VV ++ ++
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 155 QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT 214
++G ++A+ +F +M+ G+ D T S+I N ++GA+ + +I V
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESM 270
+AL+ ++ K G + + L++EM + D +++ +L+ + + +E ++F+ M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 271 LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGR 330
++ G +PD VT+ +++ + + V+ G ++F ++ + G+IP Y+ ++ F ++G+
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVLGFCQSGK 435
Query: 331 LEEARDFINQMLFR 344
L A++ +M+ R
Sbjct: 436 LNAAKELFQEMVSR 449
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 117/252 (46%), Gaps = 12/252 (4%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D ++++++I + G EA +++ EM + + D T+ S++ L E NQ
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQN 156
++ G + +I S L++ YCK + V +F+E+S K N +++ +++G+ Q+
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
G A ++F +M GV P T G ++ + L + + S + + +
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 217 NALVSLYGKCGS--IEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESM 270
N ++ +G C + ++D LF ++ K D V++ ++ + G +E LF M
Sbjct: 494 NIII--HGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Query: 271 LTHGLKPDKVTF 282
G PD T+
Sbjct: 552 KEDGCTPDDFTY 563
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 108/252 (42%), Gaps = 52/252 (20%)
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM----SYKNVVSWTAMLVGYGQNGYSE 160
K G++ + S LV+ +C V A + M ++V+ + ++ G G
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 161 EAVKIFCDMQKYGVVPDDFTLGSVIS---SCGNLA-SLEEGAQFHGIALVSGLISFVTVS 216
EA+ + M +YG PD+ T G V++ GN A +L+ + + + ++ + V
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLT 272
++L K GS +D LF+EM K D V++++L+ GK ++ ++ M+
Sbjct: 253 DSLC----KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 273 HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLE 332
+ PD VTF S +ID+F + G+L
Sbjct: 309 RNIIPDVVTF------------------------------------SALIDVFVKEGKLL 332
Query: 333 EARDFINQMLFR 344
EA++ N+M+ R
Sbjct: 333 EAKELYNEMITR 344
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 142/310 (45%), Gaps = 10/310 (3%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D +++ +MI G + G ++A++ R+M + E D+ T+ +M+ AC +
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 315
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM----SYKNVVSWTAMLVGYGQN 156
+ + G + +A S ++ CK + TVF+ M S NV +T ++ GY ++
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
G E+A+++ M G PD T V++ +EE + GL
Sbjct: 376 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFY 435
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESM-L 271
++L+ GK G +++ RLF EM+ K D + AL+ A+++ K +E I LF+ M
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEE 495
Query: 272 THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRL 331
G T+ +LS + E+ ++++ M + GI P + + +G++
Sbjct: 496 EEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMI-DKGITPTAACFRALSTGLCLSGKV 554
Query: 332 EEARDFINQM 341
A ++++
Sbjct: 555 ARACKILDEL 564
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 139/317 (43%), Gaps = 11/317 (3%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E R + E D I++ +MI C + + +++EM + ++ + F ++
Sbjct: 277 MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGG 336
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM---SYK-N 142
L EG +I+ G K N+ + L+D Y K SV+ A + M +K +
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
VV+++ ++ G +NG EEA+ F + G+ + S+I G ++E +
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFE 456
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEV-----SWTALVSAYSQF 257
G NAL+ + K +++ LF M ++ ++T L+S +
Sbjct: 457 EMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKE 516
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH 317
+ E ++L++ M+ G+ P F + + + V + +I + + G+I +
Sbjct: 517 HRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELA-PMGVI-LDAA 574
Query: 318 YSCIIDLFSRAGRLEEA 334
+I+ +AGR++EA
Sbjct: 575 CEDMINTLCKAGRIKEA 591
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 130/306 (42%), Gaps = 13/306 (4%)
Query: 46 TSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIK 105
++I + G+ E + V+R+M+ +E YT+ ++ M + + +
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 106 TGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQNGYSEE 161
K +I + ++ YCK + A ++M + + +++ M+ +
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 162 AVKIFCDMQKYG--VVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNAL 219
V ++ +M + G V P F+L VI L EG + G V + L
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSL--VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVL 368
Query: 220 VSLYGKCGSIEDC----HRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGL 275
+ Y K GS+ED HR+ E D V+++ +V+ + G+ E + F + GL
Sbjct: 369 IDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGL 428
Query: 276 KPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEAR 335
+ + + ++ + V++ ++FE M+ E G Y+ +ID F++ +++EA
Sbjct: 429 AINSMFYSSLIDGLGKAGRVDEAERLFEEMS-EKGCTRDSYCYNALIDAFTKHRKVDEAI 487
Query: 336 DFINQM 341
+M
Sbjct: 488 ALFKRM 493
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 101/253 (39%), Gaps = 56/253 (22%)
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS----YKNVVSWTAMLVGYGQNGYSE 160
+ G + +Y + L++ V SAE VF+ M ++V++ M+ GY + G ++
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 161 EAVKIFCDMQKYGVVPDDFTLGSVISSC------GNLASLEEGAQFHGIALVSGLISFVT 214
+A++ DM+ G D T ++I +C G+ +L + GI + S V
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLV- 333
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS----WTALVSAYSQFGKANETIRLFESM 270
+ K G + + + +F M K +T L+ Y++ G + IRL M
Sbjct: 334 -----IGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 388
Query: 271 LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGR 330
+ G KPD VT YS +++ + GR
Sbjct: 389 IDEGFKPDVVT------------------------------------YSVVVNGLCKNGR 412
Query: 331 LEEARDFINQMLF 343
+EEA D+ + F
Sbjct: 413 VEEALDYFHTCRF 425
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 143/326 (43%), Gaps = 19/326 (5%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D + ++++S C + GL REA + F E++S E T+ ++L G E
Sbjct: 280 DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQN 156
+ + + + LV Y + K A V + M+ K N +++T ++ YG+
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKA 399
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
G +EA+K+F M++ G VP+ T +V+S G + E + +G
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTF----KDEVSWTALVSAYSQFGKANETIRLFESMLT 272
N +++L G G + +R+F EM D ++ L+SAY + G + +++ M
Sbjct: 460 NTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR 519
Query: 273 HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAG--- 329
G T+ +L+ +R G + M K G P + YS ++ +++ G
Sbjct: 520 AGFNACVTTYNALLNALARKGDWRSGENVISDM-KSKGFKPTETSYSLMLQCYAKGGNYL 578
Query: 330 -------RLEEARDFINQMLFRDSVL 348
R++E + F + ML R +L
Sbjct: 579 GIERIENRIKEGQIFPSWMLLRTLLL 604
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 133/291 (45%), Gaps = 9/291 (3%)
Query: 59 REAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSAL 118
R+ + V EMRS+ L+ D++T ++L+AC L+E + + + G++ +AL
Sbjct: 263 RKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNAL 322
Query: 119 VDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGV 174
+ ++ K A +V KEM + V++ ++ Y + G+S+EA + M K GV
Sbjct: 323 LQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV 382
Query: 175 VPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHR 234
+P+ T +VI + G +E + +G + NA++SL GK + +
Sbjct: 383 MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIK 442
Query: 235 LFSEMT----FKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCS 290
+ +M + +W +++ G R+F M + G +PD+ TF ++S
Sbjct: 443 MLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYG 502
Query: 291 RTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
R ++++ MT+ G Y+ +++ +R G + I+ M
Sbjct: 503 RCGSEVDASKMYGEMTRA-GFNACVTTYNALLNALARKGDWRSGENVISDM 552
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 120/269 (44%), Gaps = 12/269 (4%)
Query: 26 MIEDSRQLFCDMR----ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFG 81
++ ++++ F +++ E ++++ +++ + G++ EA+ V +EM D T+
Sbjct: 296 LLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYN 355
Query: 82 SMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS-- 139
++ A +E + K G N + ++D Y K A +F M
Sbjct: 356 ELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA 415
Query: 140 --YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEG 197
N ++ A+L G+ S E +K+ CDM+ G P+ T ++++ CGN +
Sbjct: 416 GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFV 475
Query: 198 AQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT---FKDEV-SWTALVSA 253
+ G N L+S YG+CGS D +++ EMT F V ++ AL++A
Sbjct: 476 NRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNA 535
Query: 254 YSQFGKANETIRLFESMLTHGLKPDKVTF 282
++ G + M + G KP + ++
Sbjct: 536 LARKGDWRSGENVISDMKSKGFKPTETSY 564
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 159/376 (42%), Gaps = 62/376 (16%)
Query: 20 VLGRLLMIEDSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
+LG+ + ++ CDM+ + +W +M++ C G+ + VFREM+S E
Sbjct: 430 LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEP 489
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
D+ TF ++++A G + + ++ + + + GF + +AL++ + +S E V
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 549
Query: 136 KEMSYKNV----VSWTAMLVGYGQNGY--------------------------------- 158
+M K S++ ML Y + G
Sbjct: 550 SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKC 609
Query: 159 -----SEEAVKIFCDMQKYGVVPDDFTLGSVIS--SCGNLASLEEG--AQFHGIALVSGL 209
SE A +F +K+G PD S++S + N+ EG L L
Sbjct: 610 RALAGSERAFTLF---KKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDL 666
Query: 210 ISFVTVSNALVSLY---GKCGSIEDCHRLFSEMTFK-DEVSWTALVSAYSQFGKANETIR 265
+++ N+L+ +Y G+C E+ + + K D VS+ ++ + + G E +R
Sbjct: 667 VTY----NSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVR 722
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLF 325
+ M G++P T+ +S + + + + E M K + P + + ++D +
Sbjct: 723 MLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK-NDCRPNELTFKMVVDGY 781
Query: 326 SRAGRLEEARDFINQM 341
RAG+ EA DF++++
Sbjct: 782 CRAGKYSEAMDFVSKI 797
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 4/193 (2%)
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG--IALVSGLISFVT 214
G EAV++ ++ G D L + CG +LE H IALVS V
Sbjct: 98 GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCD--VG 155
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
NA++ +Y C S++D ++F EM + + ++ + G E I LF G
Sbjct: 156 ARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEG 215
Query: 275 LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
KP+ F V S C+ T V++G+ F++M +E+GI+P +HY + + + +G L+EA
Sbjct: 216 NKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEA 275
Query: 335 RDFINQMLFRDSV 347
+F+ +M SV
Sbjct: 276 LNFVERMPMEPSV 288
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 3/205 (1%)
Query: 50 SGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFK 109
S C Q G REA++V + ++ D + CG AL+ H II
Sbjct: 93 SLCIQ-GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSP 151
Query: 110 DNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDM 169
++ A +A+++MY C SV A VF+EM N + M+ + NGY EEA+ +F
Sbjct: 152 CDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRF 211
Query: 170 QKYGVVPDDFTLGSVISSCGNLASLEEGA-QFHGIALVSGLISFVTVSNALVSLYGKCGS 228
++ G P+ V S+C ++EG+ QF + G++ + +++ + G
Sbjct: 212 KEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGH 271
Query: 229 IEDCHRLFSEMTFKDEVS-WTALVS 252
+++ M + V W L++
Sbjct: 272 LDEALNFVERMPMEPSVDVWETLMN 296
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 150/310 (48%), Gaps = 18/310 (5%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC---GGV-MALQ 94
E D +++TS+I+G EA+ + +M ++ D + +++ + G V AL
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 95 EGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAML 150
+Q +Y G + ++ ++LV+ C + A+++ + M+ + +V+++ A++
Sbjct: 199 LFDQMENY----GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 151 VGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLI 210
+ + G +A +++ +M + + P+ FT S+I+ ++E Q + G
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 211 SFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRL 266
V +L++ + KC ++D ++F EM+ K + +++T L+ + Q GK N +
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEH--GIIPIQDHYSCIIDL 324
F M++ G+ P+ T+ +L V+K IFE M K G+ P Y+ ++
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 325 FSRAGRLEEA 334
G+LE+A
Sbjct: 435 LCYNGKLEKA 444
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 141/301 (46%), Gaps = 20/301 (6%)
Query: 28 EDSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSM 83
D+ L M +R D I++ ++I + G +A +++ EM + + +T+ S+
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 84 LTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK-- 141
+ + E Q + G ++ A ++L++ +CKC+ V A +F EMS K
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 142 --NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISS-CGNLASLEEGA 198
N +++T ++ G+GQ G A ++F M GV P+ T ++ C N +
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 199 QFHGIAL--VSGLISFVTVSNALVSLYGKC--GSIEDCHRLFSEMTFKD----EVSWTAL 250
F + + G+ + N L L+G C G +E +F +M ++ +++T +
Sbjct: 409 IFEDMQKREMDGVAPNIWTYNVL--LHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466
Query: 251 VSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHG 310
+ + GK + LF S+ + G+KP+ VT+ ++S R L + + +F M KE G
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM-KEDG 525
Query: 311 I 311
+
Sbjct: 526 V 526
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 118/250 (47%), Gaps = 9/250 (3%)
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS----YKNVVSWTAMLVGYGQNGY 158
++K GF+ +I ++L++ +C ++ A ++ +M +VV +T ++ +NG+
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNA 218
A+ +F M+ YG+ PD S+++ N + + V NA
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 219 LVSLYGKCGSIEDCHRLFSEM----TFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
L+ + K G D L++EM + ++T+L++ + G +E ++F M T G
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 275 LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
PD V + +++ + + V+ +IF M+++ G+ Y+ +I F + G+ A
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK-GLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 335 RDFINQMLFR 344
++ + M+ R
Sbjct: 372 QEVFSHMVSR 381
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 141/305 (46%), Gaps = 11/305 (3%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
E D ++ S+++G + +A+ + +M + D + +++ + + +
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 211
Query: 99 AHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYG 154
I + G + N+ +ALV+ C A + +M K NV++++A+L +
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271
Query: 155 QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT 214
+NG EA ++F +M + + PD T S+I+ ++E Q + + G ++ V
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 331
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESM 270
N L++ + K +ED +LF EM+ + + V++ L+ + Q G ++ F M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 271 LTHGLKPDKVTFIGVL-SVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAG 329
G+ PD T+ +L +C L EK IFE M K + I Y+ +I + G
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGEL-EKALVIFEDMQKREMDLDIV-TYTTVIRGMCKTG 449
Query: 330 RLEEA 334
++EEA
Sbjct: 450 KVEEA 454
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 134/291 (46%), Gaps = 44/291 (15%)
Query: 61 AIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVD 120
A+ + +M E D+ T GS++ + + +++ G+K +I A +A++D
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 121 MYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVP 176
CK + V A FKE+ K NVV++TA++ G + +A ++ DM K + P
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 177 DDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLF 236
+ V +AL+ + K G + + LF
Sbjct: 259 N-----------------------------------VITYSALLDAFVKNGKVLEAKELF 283
Query: 237 SEMTF----KDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRT 292
EM D V++++L++ + +E ++F+ M++ G D V++ +++ +
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 293 RLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLF 343
+ VE G ++F M+ + G++ Y+ +I F +AG +++A++F +QM F
Sbjct: 344 KRVEDGMKLFREMS-QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 131/288 (45%), Gaps = 39/288 (13%)
Query: 29 DSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSML 84
D+ +L DM ++ + I++++++ +NG EA ++F EM ++ D T+ S++
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK--- 141
+ E NQ ++ G ++ + + L++ +CK + V+ +F+EMS +
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 142 -NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
N V++ ++ G+ Q G ++A + F M +G+ PD +T
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN------------------ 404
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKA 260
L+ GL + ALV ED + EM D V++T ++ + GK
Sbjct: 405 ---ILLGGLCDNGELEKALVIF-------EDMQK--REMDL-DIVTYTTVIRGMCKTGKV 451
Query: 261 NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKE 308
E LF S+ GLKPD VT+ ++S L+ + ++ M +E
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 148/356 (41%), Gaps = 44/356 (12%)
Query: 20 VLGRLLMIEDSRQLFCDMRE----RDSISWTSMISGCTQNGLHREAIDVFREMRSEMLET 75
V G+ + ++R L +M E +++S+++++S +N EA+ VF EM+
Sbjct: 269 VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 328
Query: 76 DQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVF 135
D T M+ G + ++E ++ + K + N+ + + ++ +Y + A +F
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 388
Query: 136 KEMSYK----NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNL 191
+ M K NVV++ M+ YG+ E+A + +MQ G+ P+ T ++IS G
Sbjct: 389 RLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 448
Query: 192 ASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKD-------- 243
L+ A SG+ + ++ Y + G + RL E+ D
Sbjct: 449 GKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI 508
Query: 244 ----------EVSWT-----------------ALVSAYSQFGKANETIRLFESMLTHGLK 276
E +W +++ YS+ + I +FE M T G
Sbjct: 509 TILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYF 568
Query: 277 PDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLE 332
PD VL+ + R EK + ++ M +E + P + H+ ++ L+S E
Sbjct: 569 PDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFE 623
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 143/327 (43%), Gaps = 44/327 (13%)
Query: 64 VFREMRSEMLETDQYTFGSMLTACG-------GVMALQEGNQAH---------------- 100
+F EMR L D+YT+ +++T+ G + LQ+ Q
Sbjct: 177 LFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSR 236
Query: 101 ------------SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS----YKNVV 144
S + ++G ++ A ++++++Y K + + A + KEM+ N V
Sbjct: 237 RLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTV 296
Query: 145 SWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIA 204
S++ +L Y +N EA+ +F +M++ D T +I G L ++E +
Sbjct: 297 SYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSL 356
Query: 205 LVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKD----EVSWTALVSAYSQFGKA 260
+ V N ++ +YG+ + LF M KD V++ ++ Y + +
Sbjct: 357 RKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEH 416
Query: 261 NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC 320
+ L + M + G++P+ +T+ ++S+ + +++ +F+ + + G+ Q Y
Sbjct: 417 EKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL-RSSGVEIDQVLYQT 475
Query: 321 IIDLFSRAGRLEEARDFINQMLFRDSV 347
+I + R G + A+ ++++ D++
Sbjct: 476 MIVAYERVGLMGHAKRLLHELKLPDNI 502
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 142/304 (46%), Gaps = 11/304 (3%)
Query: 43 ISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSY 102
+++ +++G + G A+++ +M + +E D F +++ + + +
Sbjct: 226 VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 285
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQNGY 158
+ G + N+ S+L+ C A + +M K N+V++ A++ + + G
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNA 218
EA K++ DM K + PD FT S+++ L++ Q + V N
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 219 LVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
L+ + K +ED LF EM+ + D V++T L+ G + ++F+ M++ G
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 275 LKPDKVTFIGVLS-VCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEE 333
+ PD +T+ +L +C+ +L EK ++F+ M K + I Y+ +I+ +AG++++
Sbjct: 466 VPPDIMTYSILLDGLCNNGKL-EKALEVFDYMQKSEIKLDIY-IYTTMIEGMCKAGKVDD 523
Query: 334 ARDF 337
D
Sbjct: 524 GWDL 527
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 140/321 (43%), Gaps = 40/321 (12%)
Query: 29 DSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSML 84
D+ QL DM E+ + +++ ++I + G EA ++ +M ++ D +T+ S++
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK--- 141
L + Q +++ ++ + L+ +CK + V+ +F+EMS++
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 142 -NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
+ V++T ++ G +G + A K+F M GV PD T ++ N LE+ +
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE- 491
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKA 260
+ ++ S + +Y +T ++ + GK
Sbjct: 492 --------VFDYMQKSEIKLDIY----------------------IYTTMIEGMCKAGKV 521
Query: 261 NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC 320
++ LF S+ G+KP+ VT+ ++S RL+++ + + M KE G +P Y+
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM-KEDGPLPNSGTYNT 580
Query: 321 IIDLFSRAGRLEEARDFINQM 341
+I R G + + I +M
Sbjct: 581 LIRAHLRDGDKAASAELIREM 601
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 27 IEDSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGS 82
+ED +LF +M R D++++T++I G +G A VF++M S+ + D T+
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK- 141
+L L++ + Y+ K+ K +IY + +++ CK V +F +S K
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Query: 142 ---NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGA 198
NVV++ M+ G +EA + M++ G +P+ T ++I A L +G
Sbjct: 536 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR-----AHLRDGD 590
Query: 199 QFHGIALVSGLISFVTVSNA 218
+ L+ + S V +A
Sbjct: 591 KAASAELIREMRSCRFVGDA 610
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK---EMSYK-NVVSWTAMLVGYGQNGY 158
++K G++ +I S+L++ YC + + A + EM Y+ + +++T ++ G +
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISS-CG--------NLASLEEGAQFHGIALV--- 206
+ EAV + M + G P+ T G V++ C NL + E A+ ++
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 207 -----------------------SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK- 242
G+ V ++L+S G D +L S+M K
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 243 ---DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLS-VCSRTRLVEKG 298
+ V++ AL+ A+ + GK E +L++ M+ + PD T+ +++ C RL +K
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL-DKA 384
Query: 299 NQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFR 344
Q+FE M + P Y+ +I F ++ R+E+ + +M R
Sbjct: 385 KQMFEFMVSKD-CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 136/301 (45%), Gaps = 25/301 (8%)
Query: 43 ISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSY 102
+++ ++I+G + G A D+F+ M +E D + +++ L G++ S
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM----SYKNVVSWTAMLVGYGQNGY 158
+ G K ++ S+ +D+Y K + +A V+K M NVV++T ++ G Q+G
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVIS---SCGNLASLEEGAQFHGIALVSGLISF--- 212
EA ++ + K G+ P T S+I CGNL S G AL +I
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS--------GFALYEDMIKMGYP 458
Query: 213 --VTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRL 266
V + LV K G + R +M + + V + +L+ + + + +E +++
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 267 FESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFS 326
F M +G+KPD TF V+ V +E+ +F M K G+ P Y +ID F
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK-MGLEPDALAYCTLIDAFC 577
Query: 327 R 327
+
Sbjct: 578 K 578
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 155/390 (39%), Gaps = 79/390 (20%)
Query: 31 RQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGV 90
+++ C + +++T +I G Q+G EA ++ ++ +E T+ S++
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC 439
Query: 91 MALQEGNQAHSYIIKTGFKD-----------------------------------NIYAG 115
L+ G + +IK G+ N+
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 116 SALVDMYCKCRSVKSAETVFKEMSY----KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQK 171
++L+D +C+ A VF+ M +V ++T ++ G EEA+ +F M K
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
Query: 172 YGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIED 231
G+ PD ++I + G Q + + + + + V N ++ L KC IED
Sbjct: 560 MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 619
Query: 232 CHRLFSEMTF----KDEVSWTALVSAYSQFGKANETIRLFE--------------SMLTH 273
+ F+ + D V++ ++ Y + +E R+FE ++L H
Sbjct: 620 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 679
Query: 274 ---------------------GLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGII 312
G KP+ VT+ ++ S++ +E ++FE M +E GI
Sbjct: 680 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM-QEKGIS 738
Query: 313 PIQDHYSCIIDLFSRAGRLEEARDFINQML 342
P YS IID + GR++EA + +Q +
Sbjct: 739 PSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 112/254 (44%), Gaps = 16/254 (6%)
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY-------KNVVSWTAMLVG 152
H +++ GF+ I + + ++ K SV E + +S NVV++ ++ G
Sbjct: 240 HRLVMERGFRVGIVSCNKVL----KGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLING 295
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISF 212
+ + G + A +F M++ G+ PD ++I L G + AL G+
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 213 VTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFE 268
V V ++ + +Y K G + ++ M + + V++T L+ Q G+ E ++
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
+L G++P VT+ ++ + + G ++E M K G P Y ++D S+
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPDVVIYGVLVDGLSKQ 474
Query: 329 GRLEEARDFINQML 342
G + A F +ML
Sbjct: 475 GLMLHAMRFSVKML 488
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 113/256 (44%), Gaps = 20/256 (7%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
E D++++ ++I ++ + +F M+ + D ++ +++ ++
Sbjct: 563 EPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 622
Query: 99 AHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY----KNVVSWTAMLVGYG 154
+ +I+ + +I + ++ YC R + AE +F+ + N V+ T ++
Sbjct: 623 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682
Query: 155 QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLE------EGAQFHGIALVSG 208
+N + A+++F M + G P+ T G ++ +E E Q GI+
Sbjct: 683 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS--PS 740
Query: 209 LISFVTVSNALVSLYGKCGSIEDCHRLFSEMT----FKDEVSWTALVSAYSQFGKANETI 264
++S+ + + L K G +++ +F + D V++ L+ Y + G+ E
Sbjct: 741 IVSYSIIIDGLC----KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 796
Query: 265 RLFESMLTHGLKPDKV 280
L+E ML +G+KPD +
Sbjct: 797 LLYEHMLRNGVKPDDL 812
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 143/318 (44%), Gaps = 23/318 (7%)
Query: 43 ISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSY 102
+++ ++I+G + G A D+F+ M +E D + +++ L G++ S
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM----SYKNVVSWTAMLVGYGQNGY 158
+ G K ++ S+ +D+Y K + +A V+K M NVV++T ++ G Q+G
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVIS---SCGNLASLEEGAQFHGIALVSGLISFVTV 215
EA ++ + K G+ P T S+I CGNL S G + + G V +
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS---GFALYEDMIKMGYPPDVVI 463
Query: 216 SNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESML 271
LV K G + R +M + + V + +L+ + + + +E +++F M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 272 THGLKPDKVTFIGVLSV-------CSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
+G+KPD TF V+ V C + G Q+F+ M + I + +I L
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEDAFCKHMK-PTIGLQLFDLMQRNKISADIA-VCNVVIHL 581
Query: 325 FSRAGRLEEARDFINQML 342
+ R+E+A F N ++
Sbjct: 582 LFKCHRIEDASKFFNNLI 599
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 159/362 (43%), Gaps = 52/362 (14%)
Query: 31 RQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGV 90
+++ C + +++T +I G Q+G EA ++ ++ +E T+ S++
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC 439
Query: 91 MALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCK----CRSVKSAETVFKEMSYKNVVSW 146
L+ G + +IK G+ ++ LVD K +++ + + + NVV +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 147 TAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVI-------SSCGNLASLEEGAQ 199
+++ G+ + +EA+K+F M YG+ PD T +V+ + C ++ G Q
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP-TIGLQ 558
Query: 200 FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT----FKDEVSWTALVSAYS 255
+ + + + + V N ++ L KC IED + F+ + D V++ ++ Y
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 618
Query: 256 QFGKANETIRLFE--------------SMLTH---------------------GLKPDKV 280
+ +E R+FE ++L H G KP+ V
Sbjct: 619 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Query: 281 TFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQ 340
T+ ++ S++ +E ++FE M +E GI P YS IID + GR++EA + +Q
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEM-QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737
Query: 341 ML 342
+
Sbjct: 738 AI 739
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 112/254 (44%), Gaps = 16/254 (6%)
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY-------KNVVSWTAMLVG 152
H +++ GF+ I + + ++ K SV E + +S NVV++ ++ G
Sbjct: 240 HRLVMERGFRVGIVSCNKVL----KGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLING 295
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISF 212
+ + G + A +F M++ G+ PD ++I L G + AL G+
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 213 VTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFE 268
V V ++ + +Y K G + ++ M + + V++T L+ Q G+ E ++
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRA 328
+L G++P VT+ ++ + + G ++E M K G P Y ++D S+
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPDVVIYGVLVDGLSKQ 474
Query: 329 GRLEEARDFINQML 342
G + A F +ML
Sbjct: 475 GLMLHAMRFSVKML 488
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 100/258 (38%), Gaps = 41/258 (15%)
Query: 32 QLFCDMRERDSISWTSMISGCTQNGL---HR--EAIDVFREMRSEMLETDQYTFGSMLTA 86
QLF D+ +R+ IS + + L HR +A F + +E D T+ +M+
Sbjct: 558 QLF-DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 616
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----N 142
+ L E + + T F N + L+ + CK + A +F M+ K N
Sbjct: 617 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 676
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
V++ ++ + ++ E + K+F +MQ+ G+ P + +I ++E
Sbjct: 677 AVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF- 735
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANE 262
H+ D V++ L+ Y + G+ E
Sbjct: 736 ------------------------------HQAIDAKLLPDVVAYAILIRGYCKVGRLVE 765
Query: 263 TIRLFESMLTHGLKPDKV 280
L+E ML +G+KPD +
Sbjct: 766 AALLYEHMLRNGVKPDDL 783
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 147/346 (42%), Gaps = 45/346 (13%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
+ +++T+++ + ++R A+ ++ +M + D + ++ L+E +
Sbjct: 293 NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF 352
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQN 156
+++ N+ +ALVD CK + SAE + +M K NVV++++M+ GY +
Sbjct: 353 KMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKK 412
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
G EEAV + M+ VVP+ FT G+VI E + + G+ +
Sbjct: 413 GMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYIL 472
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFK---------------------------------- 242
+ALV+ + G I++ L +M K
Sbjct: 473 DALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQE 532
Query: 243 -----DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEK 297
D VS+ L+S +FGK ++ M G++PD TF +++ + E
Sbjct: 533 RGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDSEG 591
Query: 298 GNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLF 343
++++ M K GI P + ++ + G++EEA +NQM+
Sbjct: 592 ILKLWDKM-KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMML 636
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 123/279 (44%), Gaps = 10/279 (3%)
Query: 68 MRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRS 127
+R+ ++ D T+ ++++ E Q S ++K G + + + L+D +CK +
Sbjct: 152 LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGN 211
Query: 128 VKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISS 187
A+ + E+S N+++ T +L Y EEA + DM G PD T S+I+
Sbjct: 212 FVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINR 268
Query: 188 -CGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK---- 242
C LE G + +S + VT + + SL+ K L+S+M +
Sbjct: 269 LCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLF-KANIYRHALALYSQMVVRGIPV 327
Query: 243 DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIF 302
D V +T L+ + G E + F+ +L P+ VT+ ++ + + I
Sbjct: 328 DLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFII 387
Query: 303 ESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
M E +IP YS +I+ + + G LEEA + +M
Sbjct: 388 TQML-EKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/324 (19%), Positives = 138/324 (42%), Gaps = 28/324 (8%)
Query: 37 MRER----DSISWTSMISGCTQNGLHREAID-VFREMRSEMLETDQYTFGSMLTA----- 86
M+ER D +S+ +ISG + G + D ++ MR + +E D TF M+ +
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFG--KVGADWAYKGMREKGIEPDIATFNIMMNSQRKQG 587
Query: 87 -CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS----YK 141
G++ L + ++ G K ++ + + +V M C+ ++ A + +M +
Sbjct: 588 DSEGILKLWDKMKS------CGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHP 641
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
N+ ++ L ++ ++ K + YG+ ++I++ L ++ A
Sbjct: 642 NLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVM 701
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEM----TFKDEVSWTALVSAYSQF 257
G G I N+L+ Y + +S M + ++ ++ S
Sbjct: 702 GDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDA 761
Query: 258 GKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH 317
G E + M + G++PD T+ ++S ++ ++ I+ M + G++P
Sbjct: 762 GLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIAD-GLVPKTST 820
Query: 318 YSCIIDLFSRAGRLEEARDFINQM 341
Y+ +I F+ G++ +AR+ + +M
Sbjct: 821 YNVLISEFANVGKMLQARELLKEM 844
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 134/303 (44%), Gaps = 44/303 (14%)
Query: 40 RDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQA 99
R+ +++TS+I G + GL EA VF ++ + L DQ+ +G ++ +++ +
Sbjct: 294 RNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRV 353
Query: 100 HSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS----YKNVVSWTAMLVGYGQ 155
H +I+ G + N ++L++ YCK + AE +F M+ + ++ ++ GY +
Sbjct: 354 HDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCR 413
Query: 156 NGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTV 215
GY +EA+K+ M + VVP V
Sbjct: 414 AGYVDEALKLCDQMCQKEVVPT-----------------------------------VMT 438
Query: 216 SNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESML 271
N L+ Y + G+ D L+ M + DE+S + L+ A + G NE ++L+E++L
Sbjct: 439 YNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVL 498
Query: 272 THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRL 331
GL D +T ++S + V + +I +++ P Y + + + G L
Sbjct: 499 ARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNI-FRCKPAVQTYQALSHGYYKVGNL 557
Query: 332 EEA 334
+EA
Sbjct: 558 KEA 560
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 103/243 (42%), Gaps = 10/243 (4%)
Query: 111 NIYAGSALVDMYCKCRSVKSAETVFKEMSYK-----NVVSWTAMLVGYGQNGYSEEAVKI 165
+++ S +V+ YC+ +V A KE NVV++ +++ GY G E ++
Sbjct: 224 DVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRV 283
Query: 166 FCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGK 225
M + GV + T S+I +EE + L++ + L+ Y +
Sbjct: 284 LRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343
Query: 226 CGSIEDCHRLFSEM----TFKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVT 281
G I D R+ M + +L++ Y + G+ E ++F M LKPD T
Sbjct: 344 TGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHT 403
Query: 282 FIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+ ++ R V++ ++ + M ++ ++P Y+ ++ +SR G + M
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKE-VVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 342 LFR 344
L R
Sbjct: 463 LKR 465
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 126 RSVKSAETV----FKEMSYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYG-VVPDDFT 180
++ K AE+V K++ N + + + G + G E+A K+F D+ +PD++T
Sbjct: 698 KTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYT 757
Query: 181 LGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT 240
+I C + + + G+I + NAL+ K G+++ RL ++
Sbjct: 758 YTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLP 817
Query: 241 FK----DEVSWTALVSAYSQFGKANETIRLFESMLTHGL 275
K + +++ L+ + G E +RL E M+ GL
Sbjct: 818 QKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 136/296 (45%), Gaps = 19/296 (6%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D++++ ++ISG + +G +A + R+M ++ + F +++ L E +
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM----SYKNVVSWTAMLVGYGQN 156
+I+ N++ ++L++ +C + A+ +F M + +VV++ ++ G+ ++
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
E+ +K+FC+M G+V D FT ++I L + + G+ +
Sbjct: 338 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 397
Query: 217 NALVSLYGKCGSIEDCHRLF-----SEMTFKDEVSWTALVSAYSQFGKANETIRLFESML 271
N L+ G IE + SEM D +++ ++ + K E LF S+
Sbjct: 398 NILLDCLCNNGKIEKALVMVEDLQKSEMDV-DIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Query: 272 THGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIP--------IQDHYS 319
G+KPD + +I ++S R L + +++ M KE G +P ++DHY+
Sbjct: 457 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRM-KEDGFMPSERIYDETLRDHYT 511
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 152/327 (46%), Gaps = 13/327 (3%)
Query: 28 EDSRQLFCDMRERDSIS----WTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSM 83
+D+ LFC+M + I +T +++ + I ++ +M + + D Y+F +
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 84 LTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS---- 139
+ L ++K GF+ +I +L++ +C+ + A ++ M
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 140 YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQ 199
NVV + ++ G +N A+++F M+K G+ D T ++IS N + A+
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 200 FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEV----SWTALVSAYS 255
+ + V AL+ + K G++ + L+ EM + V ++ +L++ +
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 256 QFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQ 315
G + +F+ M++ G PD VT+ +++ +++ VE G ++F MT + G++
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ-GLVGDA 359
Query: 316 DHYSCIIDLFSRAGRLEEARDFINQML 342
Y+ +I + +AG+L A+ N+M+
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 124/296 (41%), Gaps = 36/296 (12%)
Query: 43 ISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSY 102
+ + ++I+G +N A++VF M + + D T+ ++++ + +
Sbjct: 185 VIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRD 244
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYGQNGYSEEA 162
++K N+ +AL+D + K ++ A ++KEM ++
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS-------------------- 284
Query: 163 VKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSL 222
VVP+ FT S+I+ L + + + G V N L++
Sbjct: 285 -----------VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITG 333
Query: 223 YGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPD 278
+ K +ED +LF EMT++ D ++ L+ Y Q GK N ++F M+ G+ PD
Sbjct: 334 FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 393
Query: 279 KVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
VT+ +L +EK + E + K + I Y+ II R +L+EA
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT-YNIIIQGLCRTDKLKEA 448
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 162/333 (48%), Gaps = 13/333 (3%)
Query: 27 IEDSRQLFCDM---RERDSI-SWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGS 82
+E+ LFC M R SI ++ ++S ++ + I +F M + D Y++
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETV---FKEMS 139
++ ++K G++ ++ S+L++ +C+ V A + +EM
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 140 YK-NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGA 198
++ +VV + ++ G + G +AV++F M++ GV D T S+++ + A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 199 QFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAY 254
+ ++ ++ V A++ ++ K G + +L+ EMT + D ++ +L++
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 255 SQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPI 314
G+ +E ++ + M+T G PD VT+ +++ +++ V++G ++F M + G++
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA-QRGLVGD 348
Query: 315 QDHYSCIIDLFSRAGRLEEARDFINQMLFRDSV 347
Y+ II + +AGR + A++ ++M R ++
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNI 381
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 138/304 (45%), Gaps = 22/304 (7%)
Query: 26 MIEDSRQLFCDMRERD-----SISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTF 80
++ D+ +LF D ERD ++++ S+++G +G +A + R+M + + TF
Sbjct: 189 LVNDAVELF-DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 247
Query: 81 GSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY 140
+++ E + + + + +++ ++L++ C V A+ + M
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307
Query: 141 K----NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE 196
K +VV++ ++ G+ ++ +E K+F +M + G+V D T ++I +
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ-----GYFQA 362
Query: 197 GAQFHGIALVSGLISFVTVSNALVSLYGKCGS--IEDCHRLFSEMTFK----DEVSWTAL 250
G + S + S + + LYG C + +E LF M D ++ +
Sbjct: 363 GRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Query: 251 VSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHG 310
+ + G + LF S+ GLKPD V++ ++S R R +K + ++ M +E G
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM-QEDG 481
Query: 311 IIPI 314
++P+
Sbjct: 482 LLPL 485
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 148/368 (40%), Gaps = 70/368 (19%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGV---------- 90
D++ +T +ISG + L EA+D MR+ + T+ ++L C
Sbjct: 301 DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVL 360
Query: 91 -MALQEG-----------------NQAHSY-------IIKTGFKDNIYAGSALVDMYC-- 123
M + EG + HSY ++K G + L+ C
Sbjct: 361 NMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGD 420
Query: 124 ----KCRSVKSAETVFKEM-------SYKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKY 172
C + AE + EM + NV S+T L G+ E+A + +M
Sbjct: 421 KDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK---YEKAFSVIREMIGQ 477
Query: 173 GVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDC 232
G +PD T V++ N + +E GL++ V +V + K G IE
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 233 HRLFSEMT----FKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSV 288
+ F+EM + V++TAL+ AY + K + LFE+ML+ G P+ VT+ ++
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 289 CSRTRLVEKGNQIFESMTKEHGIIPIQDH---------------YSCIIDLFSRAGRLEE 333
+ VEK QIFE M + + + Y ++D F ++ R+EE
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 334 ARDFINQM 341
AR ++ M
Sbjct: 658 ARKLLDAM 665
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 129/328 (39%), Gaps = 59/328 (17%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D ++T M+ + GL +A F EMR + T+ +++ A + N+
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM--------------------SY 140
++ G NI SAL+D +CK V+ A +F+ M
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 141 KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
NVV++ A+L G+ ++ EEA K+ M G P+ ++I + L+E +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 201 ------HGIA--------------------LVSGLIS---------FVTVSNALVSLYGK 225
HG L S ++S V + ++ K
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 226 CGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVT 281
G ++ ++L M K + V++TA++ + GK + L E M + G+ P+ VT
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 282 FIGVLSVCSRTRLVEKGNQIFESMTKEH 309
+ ++ C + ++ + + E M + H
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 126/312 (40%), Gaps = 32/312 (10%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
+ I+ +S G + +A V REM + D T+ +L ++
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS----YKNVVSWTAMLVGYGQN 156
+ + G ++Y + +VD +CK ++ A F EM NVV++TA++ Y +
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
A ++F M G +P+ T ++I +E+ Q
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI---------------- 610
Query: 217 NALVSLYGKCGS--IEDCHRLFSEMTFKDE----VSWTALVSAYSQFGKANETIRLFESM 270
CGS + D F + E V++ AL+ + + + E +L ++M
Sbjct: 611 -----FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 271 LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGR 330
G +P+++ + ++ + +++ ++ M+ EHG YS +ID + + R
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS-EHGFPATLYTYSSLIDRYFKVKR 724
Query: 331 LEEARDFINQML 342
+ A +++ML
Sbjct: 725 QDLASKVLSKML 736
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 140/357 (39%), Gaps = 56/357 (15%)
Query: 36 DMRERDSI-SWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQ 94
D ER ++ ++ +++ G ++ EA + M E E +Q + +++ V L
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 95 EGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM----SYKNVVSWTAML 150
E + + + + GF +Y S+L+D Y K + A V +M NVV +T M+
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 751
Query: 151 VGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLI 210
G + G ++EA K+ M++ G P+ T ++I G + +E + G+
Sbjct: 752 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811
Query: 211 SFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQ----FGKAN-ETIR 265
L+ K G+++ H L EM + W + Y + F K E++
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEEMK---QTHWPTHTAGYRKVIEGFNKEFIESLG 868
Query: 266 LFESMLTHGLKP--------------------------DKVTFIGVL------------S 287
L + + P + TF L S
Sbjct: 869 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 928
Query: 288 VCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA---RDFINQM 341
+C + VE Q+F MTK+ G+IP + +I R ++ EA DFI+ M
Sbjct: 929 LCLANK-VETAFQLFSEMTKK-GVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHM 983
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 145/312 (46%), Gaps = 10/312 (3%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
E D + + ++I G + +A D+F +M ++ ++ D +T+ +++ + ++
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 99 AHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM-----SYKNVVSWTAMLVGY 153
S +++ ++ +AL+D + K + AE ++ EM + +VV++ ++ G+
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 154 GQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFV 213
+ EE +++F +M + G+V + T ++I + + G+ +
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 214 TVSNALVSLYGKCGSIEDCHRLFSEMTFKDE----VSWTALVSAYSQFGKANETIRLFES 269
N L+ G++E +F M +D V++T ++ A + GK + LF S
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 270 MLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAG 329
+ G+KP+ VT+ ++S R L E+ + +F M KE G +P Y+ +I R G
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM-KEDGPLPNSGTYNTLIRARLRDG 545
Query: 330 RLEEARDFINQM 341
+ + I +M
Sbjct: 546 DEAASAELIKEM 557
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 140/329 (42%), Gaps = 12/329 (3%)
Query: 25 LMIEDSRQLFCDM---RERDSI-SWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTF 80
L ++D+ LF DM R SI ++ ++S + I + +M++ + + YT+
Sbjct: 54 LKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY 113
Query: 81 GSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK---E 137
+ L ++K G+ +I ++L++ +C + A + E
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 138 MSYK-NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE 196
M Y+ + V++T ++ G Q+ + EAV + M G PD T G+VI+ +
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 197 GAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVS 252
+ + V + N ++ K ++D LF++M K D ++ L+S
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 253 AYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGII 312
+G+ ++ RL ML + PD V F ++ + + + ++++ M K
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 313 PIQDHYSCIIDLFSRAGRLEEARDFINQM 341
P Y+ +I F + R+EE + +M
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 115/246 (46%), Gaps = 9/246 (3%)
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY----KNVVSWTAMLVGYGQNGYSE 160
+ GFK + + + +V + + + EM N V++ ++ YG+ Y +
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 161 EAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALV 220
EA+ +F MQ+ G PD T ++I L+ + +GL + ++
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 221 SLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLTHGLK 276
+ GK G + HRLF EM + + V++ +++ +++ ++L+ M G +
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 277 PDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARD 336
PDKVT+ V+ V +E+ +F M +++ +P + Y ++DL+ +AG +++A
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKN-WVPDEPVYGLLVDLWGKAGNVDKAWQ 590
Query: 337 FINQML 342
+ ML
Sbjct: 591 WYQAML 596
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 127/280 (45%), Gaps = 39/280 (13%)
Query: 22 GRLLMIEDSRQLFCDMRE----RDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQ 77
GR ++++ +F M+E D +++ ++I + G A+D+++ M+ L D
Sbjct: 405 GRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDT 464
Query: 78 YTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE 137
+T+ ++ G L ++ ++ G N+ + ++ ++ K R+ ++A ++++
Sbjct: 465 FTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRD 524
Query: 138 MS----YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLAS 193
M + V+++ ++ G G+ EEA +F +MQ+ VPD+ G ++ G +
Sbjct: 525 MQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGN 584
Query: 194 LEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSA 253
+++ Q++ L +GL V N+L+S + + HR+
Sbjct: 585 VDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRV------HRM------------------ 620
Query: 254 YSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTR 293
+E L +SML GL P T+ +LS C+ R
Sbjct: 621 -------SEAYNLLQSMLALGLHPSLQTYTLLLSCCTDAR 653
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 114/280 (40%), Gaps = 43/280 (15%)
Query: 69 RSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSV 128
R + D +T+ +M+ G E N+ +++ G K N + L+ Y + +
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 129 KSAETVFKEMSY----KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSV 184
K A VF +M + V++ ++ + + G+ + A+ ++ MQ+ G+ PD FT +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 185 ISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLY--------------------- 223
I+ G L + + G + N +++L+
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 224 --------------GKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIR 265
G CG +E+ +F+EM K DE + LV + + G ++ +
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQ 590
Query: 266 LFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESM 305
+++ML GL+P+ T +LS R + + + +SM
Sbjct: 591 WYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 112/246 (45%), Gaps = 9/246 (3%)
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM----SYKNVVSWTAMLVGYGQNGYSE 160
+ GFK + + + +V + + + + EM N V++ ++ YG+ Y
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 161 EAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALV 220
EA+ +F MQ+ G PD T ++I L+ + GL + ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 221 SLYGKCGSIEDCHRLFSEMT----FKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLK 276
+ GK G + H+LF EM + V++ ++ +++ ++L+ M G +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 277 PDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARD 336
PDKVT+ V+ V +E+ +F M +++ IP + Y ++DL+ +AG +E+A
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN-WIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 337 FINQML 342
+ ML
Sbjct: 596 WYQAML 601
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 126/280 (45%), Gaps = 39/280 (13%)
Query: 22 GRLLMIEDSRQLFCDMRE----RDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQ 77
GR + ++ +F M+E D +++ ++I + G A+D+++ M++ L D
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 78 YTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE 137
+T+ ++ G L ++ ++ G N+ + ++D++ K R+ ++A ++++
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 138 MSY----KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLAS 193
M + V+++ ++ G GY EEA +F +MQ+ +PD+ G ++ G +
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN 589
Query: 194 LEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSA 253
+E+ Q++ L +GL V N+L+S + + I
Sbjct: 590 VEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA----------------------- 626
Query: 254 YSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTR 293
E L ++ML GL+P T+ +LS C+ R
Sbjct: 627 --------EAYELLQNMLALGLRPSLQTYTLLLSCCTDGR 658
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 112/246 (45%), Gaps = 9/246 (3%)
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM----SYKNVVSWTAMLVGYGQNGYSE 160
+ GFK + + + +V + + + + EM N V++ ++ YG+ Y
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 161 EAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALV 220
EA+ +F MQ+ G PD T ++I L+ + GL + ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 221 SLYGKCGSIEDCHRLFSEMT----FKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLK 276
+ GK G + H+LF EM + V++ ++ +++ ++L+ M G +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 277 PDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARD 336
PDKVT+ V+ V +E+ +F M +++ IP + Y ++DL+ +AG +E+A
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN-WIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 337 FINQML 342
+ ML
Sbjct: 596 WYQAML 601
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 126/280 (45%), Gaps = 39/280 (13%)
Query: 22 GRLLMIEDSRQLFCDMRE----RDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQ 77
GR + ++ +F M+E D +++ ++I + G A+D+++ M++ L D
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 78 YTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE 137
+T+ ++ G L ++ ++ G N+ + ++D++ K R+ ++A ++++
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 138 MSY----KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLAS 193
M + V+++ ++ G GY EEA +F +MQ+ +PD+ G ++ G +
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN 589
Query: 194 LEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSA 253
+E+ Q++ L +GL V N+L+S + + I
Sbjct: 590 VEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA----------------------- 626
Query: 254 YSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTR 293
E L ++ML GL+P T+ +LS C+ R
Sbjct: 627 --------EAYELLQNMLALGLRPSLQTYTLLLSCCTDGR 658
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 112/246 (45%), Gaps = 9/246 (3%)
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM----SYKNVVSWTAMLVGYGQNGYSE 160
+ GFK + + + +V + + + + EM N V++ ++ YG+ Y
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 161 EAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALV 220
EA+ +F MQ+ G PD T ++I L+ + GL + ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 221 SLYGKCGSIEDCHRLFSEMT----FKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLK 276
+ GK G + H+LF EM + V++ ++ +++ ++L+ M G +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 277 PDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARD 336
PDKVT+ V+ V +E+ +F M +++ IP + Y ++DL+ +AG +E+A
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN-WIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 337 FINQML 342
+ ML
Sbjct: 596 WYQAML 601
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 126/280 (45%), Gaps = 39/280 (13%)
Query: 22 GRLLMIEDSRQLFCDMRE----RDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQ 77
GR + ++ +F M+E D +++ ++I + G A+D+++ M++ L D
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 78 YTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE 137
+T+ ++ G L ++ ++ G N+ + ++D++ K R+ ++A ++++
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 138 MSY----KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLAS 193
M + V+++ ++ G GY EEA +F +MQ+ +PD+ G ++ G +
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN 589
Query: 194 LEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSA 253
+E+ Q++ L +GL V N+L+S + + I
Sbjct: 590 VEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA----------------------- 626
Query: 254 YSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTR 293
E L ++ML GL+P T+ +LS C+ R
Sbjct: 627 --------EAYELLQNMLALGLRPSLQTYTLLLSCCTDGR 658
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 150/334 (44%), Gaps = 15/334 (4%)
Query: 21 LGRLLMIEDSRQLFCDM---RERDSI-SWTSMISGCTQNGLHREAIDVFREMRSEMLETD 76
+L +D ++ F DM R ++ ++ MI + G A +F EM+ L D
Sbjct: 237 FAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD 296
Query: 77 QYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK 136
T+ SM+ G V L + + + ++ +AL++ +CK + ++
Sbjct: 297 TVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYR 356
Query: 137 EMS----YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLA 192
EM NVVS++ ++ + + G ++A+K + DM++ G+VP+++T S+I + +
Sbjct: 357 EMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG 416
Query: 193 SLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEM----TFKDEVSWT 248
+L + + L G+ V AL+ +++ LF +M + S+
Sbjct: 417 NLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYN 476
Query: 249 ALVSAYSQFGKANETIRLFESMLTHGLKPDKVTF-IGVLSVCSRTRLVEKGNQIFESMTK 307
AL+ + + + + L + G+KPD + + + +CS + +E + M K
Sbjct: 477 ALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK-IEAAKVVMNEM-K 534
Query: 308 EHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
E GI Y+ ++D + ++G E +++M
Sbjct: 535 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 151/324 (46%), Gaps = 10/324 (3%)
Query: 27 IEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTA 86
+E R++ + + + +S+++++ + G+ ++AI + +MR L ++YT+ S++ A
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 87 CGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS----YKN 142
+ L + + + +++ G + N+ +AL+D C +K AE +F +M N
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 143 VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHG 202
+ S+ A++ G+ + + A+++ +++ G+ PD G+ I +L +E
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 531
Query: 203 IALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKD----EVSWTALVSAYSQFG 258
G+ + + L+ Y K G+ + L EM D V++ L+ +
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 591
Query: 259 KANETIRLFESMLTH-GLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDH 317
++ + F + GL+ + F ++ + VE +FE M ++ G++P +
Sbjct: 592 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK-GLVPDRTA 650
Query: 318 YSCIIDLFSRAGRLEEARDFINQM 341
Y+ ++D + G + EA ++M
Sbjct: 651 YTSLMDGNFKQGNVLEALALRDKM 674
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEM----TFKDEVSWTALVSAYSQFGKANETIRLFESM 270
V +AL S+ G +E+ + FS+M F S L+ +++ GK ++ R F+ M
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 271 LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGR 330
+ G +P T+ ++ + VE +FE M K G++P Y+ +ID F + GR
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 331 LEEARDFINQM 341
L++ F +M
Sbjct: 313 LDDTVCFFEEM 323
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 11/255 (4%)
Query: 98 QAHSYIIKT---GFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKNVVSWTAMLVGYG 154
Q+H+ I KT +D + + +CR V S + + ++ A+
Sbjct: 33 QSHNLITKTITSSLQDVLTRPIWQNRSFVQCRRVSSYAQMVNNHQSVTIETFDALC---- 88
Query: 155 QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT 214
+ EA+++ ++ G + D L + CG + +LEE H S+ T
Sbjct: 89 KQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARSYHT 148
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
V + +Y C S +D +F+EM ++ +W ++ ++ G+ I +F + G
Sbjct: 149 V----IEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEG 204
Query: 275 LKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEA 334
KPDK F V C + +G FESM +++G++ + Y +I++ + G L+EA
Sbjct: 205 NKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEA 264
Query: 335 RDFINQMLFRDSVLM 349
DF+ +M SV M
Sbjct: 265 LDFVERMTVEPSVEM 279
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 149/333 (44%), Gaps = 28/333 (8%)
Query: 30 SRQLFCDMRER----DSISWTSMISGCTQNG--LHREAIDVFREMRSEMLETDQYTFGSM 83
+++L MR+R D IS+ ++I+ ++G A+++ +R+ L D T+ ++
Sbjct: 244 AQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTL 303
Query: 84 LTACG------GVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKE 137
L+AC G + + E +AH + +++ +A++ +Y +C AE +F E
Sbjct: 304 LSACSRDSNLDGAVKVFEDMEAHR------CQPDLWTYNAMISVYGRCGLAAEAERLFME 357
Query: 138 MSYK----NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLAS 193
+ K + V++ ++L + + +E+ +++ MQK G D+ T ++I G
Sbjct: 358 LELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQ 417
Query: 194 LEEGAQ-FHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMT---FKDEV-SWT 248
L+ Q + + +SG L+ GK + L SEM K + +++
Sbjct: 418 LDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYS 477
Query: 249 ALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKE 308
AL+ Y++ GK E F ML G KPD + + +L V R K ++ M +
Sbjct: 478 ALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISD 537
Query: 309 HGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
G P Y +I + R ++ + I M
Sbjct: 538 -GHTPSYTLYELMILGLMKENRSDDIQKTIRDM 569
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 115/243 (47%), Gaps = 10/243 (4%)
Query: 110 DNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQNG--YSEEAV 163
D + +A++ +Y + A+ + M + +++S+ ++ ++G AV
Sbjct: 223 DRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAV 282
Query: 164 KIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLY 223
++ ++ G+ PD T +++S+C ++L+ + + NA++S+Y
Sbjct: 283 ELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVY 342
Query: 224 GKCGSIEDCHRLFSEMT----FKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDK 279
G+CG + RLF E+ F D V++ +L+ A+++ + +++ M G D+
Sbjct: 343 GRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDE 402
Query: 280 VTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFIN 339
+T+ ++ + + ++ Q+++ M G P Y+ +ID +A R EA ++
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 340 QML 342
+ML
Sbjct: 463 EML 465
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 8/207 (3%)
Query: 142 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFH 201
+ +++ +L ++ + AVK+F DM+ + PD +T ++IS G E +
Sbjct: 296 DAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLF 355
Query: 202 GIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF----KDEVSWTALVSAYSQF 257
+ G N+L+ + + + E ++ +M KDE+++ ++ Y +
Sbjct: 356 MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQ 415
Query: 258 GKANETIRLFESML-THGLKPDKVTFIGVL-SVCSRTRLVEKGNQIFESMTKEHGIIPIQ 315
G+ + ++L++ M G PD +T+ ++ S+ R VE + E + + GI P
Sbjct: 416 GQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML--DVGIKPTL 473
Query: 316 DHYSCIIDLFSRAGRLEEARDFINQML 342
YS +I +++AG+ EEA D + ML
Sbjct: 474 QTYSALICGYAKAGKREEAEDTFSCML 500
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 142/348 (40%), Gaps = 51/348 (14%)
Query: 42 SISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHS 101
S + +++ C N + EA VF ++R E + SM+ L AH
Sbjct: 681 STMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVV---YCKLGFPETAHQ 737
Query: 102 YIIKTGFKDNIYAGSAL----VDMYCKCRSVKSAETVFKEMSY----KNVVSWTAMLVGY 153
+ + K +A S + ++ Y K + + AE+V + ++ +W +++ Y
Sbjct: 738 VVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAY 797
Query: 154 GQNGYSEEAVKIFCDMQK--------------------------YGVVPDDFTLGSVISS 187
Q G E A IF M + Y VV + +G IS
Sbjct: 798 AQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISK 857
Query: 188 CGNLASLEEGAQFHGIALV---------SGLISFVTVSNALVSLYGKCGSIEDCHRLFSE 238
L L+ A+ I V +G + + + ++ L K + D + SE
Sbjct: 858 SSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSE 917
Query: 239 M---TFKDEVS-WTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRL 294
M FK E++ W +++ Y+ +T+++++ + GL+PD+ T+ ++ + R R
Sbjct: 918 MEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRR 977
Query: 295 VEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQML 342
E+G + + M + G+ P D Y +I F + LE+A ++L
Sbjct: 978 PEEGYLLMQQM-RNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELL 1024
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 131/314 (41%), Gaps = 15/314 (4%)
Query: 28 EDSRQLFCDMRERDSISWTS-----MISGCTQNGLHREAIDVFREMRSEMLETDQYTFGS 82
E +R +F M RD S T ++ +G E V E++ + + +
Sbjct: 804 ERARAIFNTMM-RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILL 862
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYKN 142
ML A + E + +S + G+ I ++++ CK + V+ AE + EM N
Sbjct: 863 MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEAN 922
Query: 143 ----VVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGA 198
+ W +ML Y ++ V+++ +++ G+ PD+ T ++I EEG
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGY 982
Query: 199 QFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAY 254
GL + +L+S +GK +E +LF E+ K D + ++
Sbjct: 983 LLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042
Query: 255 SQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPI 314
G ++ +L + M G++P T ++ S + ++ ++ ++ K+ +
Sbjct: 1043 RDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNL-KDTEVELT 1101
Query: 315 QDHYSCIIDLFSRA 328
YS +ID + R+
Sbjct: 1102 TLPYSSVIDAYLRS 1115
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 146/314 (46%), Gaps = 11/314 (3%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D++ +T +I G + G+ A+++ EM + D T+ ++L L E ++
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQN 156
+ + + + Y + L+D +CK ++++A +F++M K +VV++ +L G+G+
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
G + A +I+ DM ++P + ++++ + L E + + + V +
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588
Query: 217 NALVSLYGKCGSIED----CHRLFSEMTFKDEVSWTALVSAYSQFGKANETIRLFESMLT 272
N+++ Y + G+ D ++ SE D +S+ L+ + + ++ L + M
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Query: 273 H--GLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGR 330
GL PD T+ +L R +++ + M E G+ P + Y+C+I+ F
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI-ERGVNPDRSTYTCMINGFVSQDN 707
Query: 331 LEEARDFINQMLFR 344
L EA ++ML R
Sbjct: 708 LTEAFRIHDEMLQR 721
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 147/344 (42%), Gaps = 14/344 (4%)
Query: 21 LGRLLMIEDSRQLFCDMRERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTF 80
+ RL ++ F + DS+ + +I Q REA + F +RS+
Sbjct: 145 VSRLEIVNSLDSTFSNCGSNDSV-FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDAC 203
Query: 81 GSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMS- 139
+++ + + ++ + I ++G N+Y + +V+ CK ++ T ++
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 140 ---YKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEE 196
Y ++V++ ++ Y G EEA ++ M G P +T +VI+ E
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 197 GAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVS----WTALVS 252
+ L SGL T +L+ K G + + ++FS+M +D V +++++S
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 253 AYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGII 312
+++ G ++ + F S+ GL PD V + ++ R ++ + M ++ +
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 313 PIQDHYSCIIDLFSRAGRLEEARDFINQM----LFRDSVLMQLV 352
+ Y+ I+ + L EA N+M LF DS + ++
Sbjct: 444 DVVT-YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 143/290 (49%), Gaps = 15/290 (5%)
Query: 39 ERDSISWTSMISG-CTQNGLHREAIDVFREMRS-EMLETDQYTFGSMLTACGGVMALQEG 96
E D +++ ++I G C N L++ A ++F++++S + D T+ SM++ ++E
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNK-ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 97 NQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM----SYKNVVSWTAMLVG 152
+ +++ G + LVD Y K + +AE + +M + +VV++T+++ G
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISF 212
Y + G + +++ +M G+ P+ FT +I++ N L + + G +I
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQ 416
Query: 213 VTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFE 268
+ N ++ + K G + + + + EM K D++++T L+ + G+ E + +F
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH 476
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKG---NQIFESMTKEHGIIPIQ 315
M+ G PDK+T +LS + + ++ NQI + + ++P++
Sbjct: 477 KMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARK-GQSNNVVPLE 525
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 128/292 (43%), Gaps = 47/292 (16%)
Query: 60 EAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALV 119
+A+ +F E D TF ++ GV ++ + + G + +I + L+
Sbjct: 189 DAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 120 DMYCKCRSVKSAETVFKEMSY-----KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGV 174
+CK + A +FK++ +VV++T+M+ GY + G EA + DM + G+
Sbjct: 249 QGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI 308
Query: 175 VPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHR 234
P + T N LV Y K G +
Sbjct: 309 YPTNVTF-----------------------------------NVLVDGYAKAGEMLTAEE 333
Query: 235 LFSEMT----FKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTF-IGVLSVC 289
+ +M F D V++T+L+ Y + G+ ++ RL+E M G+ P+ T+ I + ++C
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 290 SRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+ RL++ + + +K+ IIP Y+ +ID F +AG++ EA + +M
Sbjct: 394 NENRLLKARELLGQLASKD--IIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 146 WTAMLVGYG--QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGI 203
WT L+ + G + A ++F M+ GV P++ LG ++SS E+G
Sbjct: 104 WTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFA-----EKGKLHFAT 158
Query: 204 ALVSGLISF-----VTVSNALVSLYGKCGSIEDCHRLFSE----MTFKDEVSWTALVSAY 254
AL+ L SF V N+L++ K +ED +LF E + D ++ L+
Sbjct: 159 ALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 255 SQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPI 314
GKA + + L M G +PD VT+ ++ ++ + K +++F+ + P
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 315 QDHYSCIIDLFSRAGRLEEARDFINQML 342
Y+ +I + +AG++ EA ++ ML
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDML 304
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 90/236 (38%), Gaps = 41/236 (17%)
Query: 160 EEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNAL 219
E+A+K+F + ++ D T +I + E+ + G+ G + N L
Sbjct: 188 EDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 220 VSLYGKCGSIEDCHRLFSEMT-----FKDEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
+ + K + +F ++ D V++T+++S Y + GK E L + ML G
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 275 LK-----------------------------------PDKVTFIGVLSVCSRTRLVEKGN 299
+ PD VTF ++ R V +G
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGF 367
Query: 300 QIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLMQLVGQP 355
+++E M G+ P YS +I+ RL +AR+ + Q+ +D + + P
Sbjct: 368 RLWEEMNAR-GMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 143/290 (49%), Gaps = 15/290 (5%)
Query: 39 ERDSISWTSMISG-CTQNGLHREAIDVFREMRS-EMLETDQYTFGSMLTACGGVMALQEG 96
E D +++ ++I G C N L++ A ++F++++S + D T+ SM++ ++E
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNK-ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 97 NQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM----SYKNVVSWTAMLVG 152
+ +++ G + LVD Y K + +AE + +M + +VV++T+++ G
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356
Query: 153 YGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISF 212
Y + G + +++ +M G+ P+ FT +I++ N L + + G +I
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQ 416
Query: 213 VTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFE 268
+ N ++ + K G + + + + EM K D++++T L+ + G+ E + +F
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH 476
Query: 269 SMLTHGLKPDKVTFIGVLSVCSRTRLVEKG---NQIFESMTKEHGIIPIQ 315
M+ G PDK+T +LS + + ++ NQI + + ++P++
Sbjct: 477 KMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARK-GQSNNVVPLE 525
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 128/292 (43%), Gaps = 47/292 (16%)
Query: 60 EAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALV 119
+A+ +F E D TF ++ GV ++ + + G + +I + L+
Sbjct: 189 DAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 120 DMYCKCRSVKSAETVFKEMSY-----KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGV 174
+CK + A +FK++ +VV++T+M+ GY + G EA + DM + G+
Sbjct: 249 QGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI 308
Query: 175 VPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHR 234
P + T N LV Y K G +
Sbjct: 309 YPTNVTF-----------------------------------NVLVDGYAKAGEMLTAEE 333
Query: 235 LFSEMT----FKDEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTF-IGVLSVC 289
+ +M F D V++T+L+ Y + G+ ++ RL+E M G+ P+ T+ I + ++C
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 290 SRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQM 341
+ RL++ + + +K+ IIP Y+ +ID F +AG++ EA + +M
Sbjct: 394 NENRLLKARELLGQLASKD--IIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 146 WTAMLVGYG--QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGI 203
WT L+ + G + A ++F M+ GV P++ LG ++SS E+G
Sbjct: 104 WTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFA-----EKGKLHFAT 158
Query: 204 ALVSGLISF-----VTVSNALVSLYGKCGSIEDCHRLFSE----MTFKDEVSWTALVSAY 254
AL+ L SF V N+L++ K +ED +LF E + D ++ L+
Sbjct: 159 ALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 255 SQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPI 314
GKA + + L M G +PD VT+ ++ ++ + K +++F+ + P
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 315 QDHYSCIIDLFSRAGRLEEARDFINQML 342
Y+ +I + +AG++ EA ++ ML
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDML 304
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 90/236 (38%), Gaps = 41/236 (17%)
Query: 160 EEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNAL 219
E+A+K+F + ++ D T +I + E+ + G+ G + N L
Sbjct: 188 EDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 220 VSLYGKCGSIEDCHRLFSEMT-----FKDEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
+ + K + +F ++ D V++T+++S Y + GK E L + ML G
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 275 LK-----------------------------------PDKVTFIGVLSVCSRTRLVEKGN 299
+ PD VTF ++ R V +G
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGF 367
Query: 300 QIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRDSVLMQLVGQP 355
+++E M G+ P YS +I+ RL +AR+ + Q+ +D + + P
Sbjct: 368 RLWEEMNAR-GMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 140/304 (46%), Gaps = 11/304 (3%)
Query: 43 ISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSY 102
+++ +++G + G A ++ +M + +E D F +++ + + +
Sbjct: 151 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 210
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQNGY 158
+ G + N+ S+L+ C A + +M K N+V++ A++ + + G
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNA 218
EA K+ DM K + PD FT S+I+ L++ Q + + N
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 219 LVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLTHG 274
L+ + K +ED LF EM+ + D V++T L+ G + ++F+ M++ G
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 275 LKPDKVTFIGVLS-VCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEE 333
+ PD +T+ +L +C+ +L EK ++F+ M K + I Y+ +I+ +AG++++
Sbjct: 391 VPPDIMTYSILLDGLCNNGKL-EKALEVFDYMQKSEIKLDIY-IYTTMIEGMCKAGKVDD 448
Query: 334 ARDF 337
D
Sbjct: 449 GWDL 452
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 139/321 (43%), Gaps = 40/321 (12%)
Query: 29 DSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSML 84
D+ QL DM E+ + +++ ++I + G EA + +M ++ D +T+ S++
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK--- 141
L + Q +++ ++ + L+ +CK + V+ +F+EMS++
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 142 -NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
+ V++T ++ G +G + A K+F M GV PD T ++ N LE+ +
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE- 416
Query: 201 HGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGKA 260
+ ++ S + +Y +T ++ + GK
Sbjct: 417 --------VFDYMQKSEIKLDIY----------------------IYTTMIEGMCKAGKV 446
Query: 261 NETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSC 320
++ LF S+ G+KP+ VT+ ++S RL+++ + + M KE G +P Y+
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM-KEDGPLPDSGTYNT 505
Query: 321 IIDLFSRAGRLEEARDFINQM 341
+I R G + + I +M
Sbjct: 506 LIRAHLRDGDKAASAELIREM 526
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 17/220 (7%)
Query: 11 CIRKWDSY--LVLG--RLLMIEDSRQLFCDMRER----DSISWTSMISGCTQNGLHREAI 62
C D+Y L+ G + +ED +LF +M R D++++T++I G +G A
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 63 DVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMY 122
VF++M S+ + D T+ +L L++ + Y+ K+ K +IY + +++
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 440
Query: 123 CKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDD 178
CK V +F +S K NVV++ M+ G +EA + M++ G +PD
Sbjct: 441 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDS 500
Query: 179 FTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNA 218
T ++I A L +G + L+ + S V +A
Sbjct: 501 GTYNTLIR-----AHLRDGDKAASAELIREMRSCRFVGDA 535
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFK---EMSYK-NVVSWTAMLVGYGQNGY 158
++K G++ +I S+L++ YC + + A + EM Y+ + +++T ++ G +
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISS-CG--------NLASLEEGAQFHGIALV--- 206
+ EAV + M + G P+ T G V++ C NL + E A+ ++
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 207 -----------------------SGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK- 242
G+ V ++L+S G D +L S+M K
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 243 ---DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLS-VCSRTRLVEKG 298
+ V++ AL+ A+ + GK E +L + M+ + PD T+ +++ C RL +K
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL-DKA 309
Query: 299 NQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFR 344
Q+FE M + P D Y+ +I F ++ R+E+ + +M R
Sbjct: 310 KQMFEFMVSKD-CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 116/260 (44%), Gaps = 33/260 (12%)
Query: 105 KTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY----KNVVSWTAMLVGYGQNGYSE 160
+ G N+Y + L++ +C+ + A + +M ++V+ +++L GY
Sbjct: 38 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 97
Query: 161 EAVKIFCDMQKYGVVPDDFTLGSVISS--CGNLASLEEGAQFHGIALV---------SGL 209
+AV + M + G PD T ++I N AS +ALV L
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS-------EAVALVDRMVQRGCQPNL 150
Query: 210 ISFVTVSNALVSLYGKCGSIEDCHRLFSEMTF----KDEVSWTALVSAYSQFGKANETIR 265
+++ V N L K G I+ L ++M D V + ++ + ++ ++ +
Sbjct: 151 VTYGVVVNGLC----KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 206
Query: 266 LFESMLTHGLKPDKVTFIGVLS-VCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDL 324
LF+ M T G++P+ VT+ ++S +CS R + +Q+ M E I P ++ +ID
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSD-ASQLLSDMI-EKKINPNLVTFNALIDA 264
Query: 325 FSRAGRLEEARDFINQMLFR 344
F + G+ EA + M+ R
Sbjct: 265 FVKEGKFVEAEKLHDDMIKR 284
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 141/307 (45%), Gaps = 9/307 (2%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
+ D ++ ++++G + G A+ + ++M +E D + +++ A + +
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 99 AHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYG 154
+ + G + N+ ++L+ C A + +M + NVV+++A++ +
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 155 QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT 214
+ G EA K++ +M K + PD FT S+I+ L+E + + V
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESM 270
N L+ + K +E+ LF EM+ + + V++ L+ Q G + ++F+ M
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 271 LTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGR 330
++ G+ PD +T+ +L + +EK +FE + K + P Y+ +I+ +AG+
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK-MEPDIYTYNIMIEGMCKAGK 515
Query: 331 LEEARDF 337
+E+ D
Sbjct: 516 VEDGWDL 522
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 135/322 (41%), Gaps = 42/322 (13%)
Query: 29 DSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSML 84
D+ +L DM ER + ++++++I + G EA ++ EM ++ D +T+ S++
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 85 TACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK--- 141
L E +I N+ + L+ +CK + V+ +F+EMS +
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 142 -NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQF 200
N V++ ++ G Q G + A KIF M GV PD T
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS------------------ 469
Query: 201 HGIALVSGLISFVTVSNALVSL-YGKCGSIEDCHRLFSEMTFKDEVSWTALVSAYSQFGK 259
L+ GL + + ALV Y + +E D ++ ++ + GK
Sbjct: 470 ---ILLDGLCKYGKLEKALVVFEYLQKSKME-----------PDIYTYNIMIEGMCKAGK 515
Query: 260 ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYS 319
+ LF S+ G+KP+ + + ++S R L E+ + +F M KE G +P Y+
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM-KEDGTLPNSGTYN 574
Query: 320 CIIDLFSRAGRLEEARDFINQM 341
+I R G + + I +M
Sbjct: 575 TLIRARLRDGDKAASAELIKEM 596
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 154/343 (44%), Gaps = 33/343 (9%)
Query: 25 LMIEDSRQLFCDM---RERDSI-SWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTF 80
L ++D+ LF +M R SI + ++S + I + M++ + D Y++
Sbjct: 59 LKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118
Query: 81 GSMLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM-- 138
++ L ++K G++ +I S+L++ YC + + A + +M
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 139 -SYK-NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVIS---------- 186
Y+ N V++ ++ G + + EAV + M G PD FT G+V++
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 187 SCGNLASLEEGAQFHGIALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFK---- 242
+ L +E+G + + ++ + T+ +AL + ++ D LF+EM K
Sbjct: 239 ALSLLKKMEKGK------IEADVVIYTTIIDALCNY----KNVNDALNLFTEMDNKGIRP 288
Query: 243 DEVSWTALVSAYSQFGKANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIF 302
+ V++ +L+ +G+ ++ RL M+ + P+ VTF ++ + + + +++
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 303 ESMTKEHGIIPIQDHYSCIIDLFSRAGRLEEARDFINQMLFRD 345
+ M K I P YS +I+ F RL+EA+ M+ +D
Sbjct: 349 DEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/315 (19%), Positives = 146/315 (46%), Gaps = 15/315 (4%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
E D ++ +S+++G EA+ + +M + + TF +++ G+ + ++
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH---GLFLHNKASE 203
Query: 99 AHSYI---IKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSY----KNVVSWTAMLV 151
A + I + G + +++ +V+ CK + A ++ K+M +VV +T ++
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 263
Query: 152 GYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLIS 211
+A+ +F +M G+ P+ T S+I N + ++ + +
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323
Query: 212 FVTVSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLF 267
V +AL+ + K G + + +L+ EM + D ++++L++ + + +E +F
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 268 ESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSR 327
E M++ P+ VT+ ++ + + VE+G ++F M+ + G++ Y+ +I +
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS-QRGLVGNTVTYNTLIQGLFQ 442
Query: 328 AGRLEEARDFINQML 342
AG + A+ +M+
Sbjct: 443 AGDCDMAQKIFKKMV 457
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 88/169 (52%), Gaps = 8/169 (4%)
Query: 27 IEDSRQLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGS 82
+E+ +LF +M +R +++++ ++I G Q G A +F++M S+ + D T+
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 83 MLTACGGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK- 141
+L L++ Y+ K+ + +IY + +++ CK V+ +F +S K
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 142 ---NVVSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISS 187
NV+ +T M+ G+ + G EEA +F +M++ G +P+ T ++I +
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 148/339 (43%), Gaps = 17/339 (5%)
Query: 32 QLFCDMRER----DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTAC 87
+L +MR+R D +++ +++G + G EAI +M S + + T +L +
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 88 GGVMALQEGNQAHSYIIKTGFKDNIYAGSALVDMYCK----CRSVKSAETVFKEMSYKNV 143
+ + + +++ GF ++ + L++ C+ R++ E + + N
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 144 VSWTAMLVGYGQNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGI 203
+S+ +L G+ + + A++ M G PD T +++++ +E+ +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 204 ALVSGLISFVTVSNALVSLYGKCGSIEDCHRLFSEMTFKD----EVSWTALVSAYSQFGK 259
G + N ++ K G +L EM KD +++++LV S+ GK
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 260 ANETIRLFESMLTHGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYS 319
+E I+ F G++P+ VTF ++ ++R ++ M G P + Y+
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI-NRGCKPNETSYT 558
Query: 320 CIIDLFSRAGRLEEARDFINQM----LFRDSVLMQLVGQ 354
+I+ + G +EA + +N++ L + S Q+ G+
Sbjct: 559 ILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVAGK 597
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 130/309 (42%), Gaps = 12/309 (3%)
Query: 41 DSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAH 100
D I T++I G + G R+A + + D T+ M++ G E N A
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS---GYCKAGEINNAL 192
Query: 101 SYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEM----SYKNVVSWTAMLVGYGQN 156
S + + ++ + ++ C +K A V M Y +V+++T ++ ++
Sbjct: 193 SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 157 GYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVS 216
A+K+ +M+ G PD T +++ L+E +F SG V
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 217 NALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLT 272
N ++ G D +L ++M K V++ L++ + G I + E M
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Query: 273 HGLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLE 332
HG +P+ +++ +L + + +++ + E M G P Y+ ++ + G++E
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV-SRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 333 EARDFINQM 341
+A + +NQ+
Sbjct: 432 DAVEILNQL 440
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 147/309 (47%), Gaps = 19/309 (6%)
Query: 39 ERDSISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQ 98
+ D +++ S+++G ++G A+D+ R+M ++ D +T+ +++ + +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 99 AHSYIIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYG 154
+ G K ++ ++LV CK + K+M + NV+++ +L +
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 155 QNGYSEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVT 214
+ G +EA +++ +M G+ P+ T +++ L E + + + +
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 215 VSNALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESM 270
+L+ Y ++D ++F ++ + + V+++ LV + Q GK LF+ M
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 271 LTHGLKPDKVTFIGVL--SVCSRTRLVEKGNQIFESMTKEH---GIIPIQDHYSCIIDLF 325
++HG+ PD +T+ G+L +C +L EK +IFE + K GI+ Y+ II+
Sbjct: 430 VSHGVLPDVMTY-GILLDGLCDNGKL-EKALEIFEDLQKSKMDLGIV----MYTTIIEGM 483
Query: 326 SRAGRLEEA 334
+ G++E+A
Sbjct: 484 CKGGKVEDA 492
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 133/308 (43%), Gaps = 11/308 (3%)
Query: 43 ISWTSMISGCTQNGLHREAIDVFREMRSEMLETDQYTFGSMLTACGGVMALQEGNQAHSY 102
+++ S++ G + G + + ++M S + + TF +L LQE N+ +
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 103 IIKTGFKDNIYAGSALVDMYCKCRSVKSAETVFKEMSYK----NVVSWTAMLVGYGQNGY 158
+I G NI + L+D YC + A + M ++V++T+++ GY
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 159 SEEAVKIFCDMQKYGVVPDDFTLGSVISSCGNLASLEEGAQFHGIALVSGLISFVTVSNA 218
++ +K+F ++ K G+V + T ++ ++ + + G++ V
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 219 LVSLYGKCGSIEDCHRLFSEMTFKDE----VSWTALVSAYSQFGKANETIRLFESMLTHG 274
L+ G +E +F ++ V +T ++ + GK + LF S+ G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 275 LKPDKVTFIGVLS-VCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEE 333
+KP+ +T+ ++S +C + L E N + M +E G P Y+ +I R G L
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSE-ANILLRKM-EEDGNAPNDCTYNTLIRAHLRDGDLTA 561
Query: 334 ARDFINQM 341
+ I +M
Sbjct: 562 SAKLIEEM 569
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 117/249 (46%), Gaps = 17/249 (6%)
Query: 106 TGFKDNIYAGSALVDMYCKCRSVKSAETVF---KEMSYK-NVVSWTAMLVGYGQNGYSEE 161
G NIY + +++ +C+C A +V ++ Y+ + ++ ++ G G E
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 162 AVKIFCDMQKYGVVPDDFTLGSVIS----SCGNLASLEEGAQFHGIALVSGLISFVTVSN 217
AV + M + G PD T S+++ S +L+ + + + + ++ T+ +
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 218 ALVSLYGKCGSIEDCHRLFSEMTFK----DEVSWTALVSAYSQFGKANETIRLFESMLTH 273
+L + G I+ LF EM K V++ +LV + GK N+ L + M++
Sbjct: 237 SLC----RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 274 GLKPDKVTFIGVLSVCSRTRLVEKGNQIFESMTKEHGIIPIQDHYSCIIDLFSRAGRLEE 333
+ P+ +TF +L V + +++ N++++ M GI P Y+ ++D + RL E
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMI-TRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 334 ARDFINQML 342
A + ++ M+
Sbjct: 352 ANNMLDLMV 360