Miyakogusa Predicted Gene
- Lj0g3v0211059.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0211059.1 tr|G7KKI6|G7KKI6_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_6g0,27.89,2e-17,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
SUBFAM,CUFF.13556.1
(456 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 7e-72
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 265 5e-71
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 1e-68
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 6e-63
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 7e-63
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 2e-61
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 5e-61
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 4e-60
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 227 1e-59
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 2e-59
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 5e-57
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 8e-56
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 8e-55
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 3e-52
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 9e-52
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 198 6e-51
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 197 1e-50
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 6e-49
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 185 5e-47
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 185 6e-47
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 5e-44
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 172 6e-43
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 2e-42
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 169 5e-42
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 168 8e-42
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 1e-41
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 1e-41
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 3e-41
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 3e-40
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 2e-39
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 7e-39
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 2e-37
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 152 4e-37
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 7e-37
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 9e-37
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 6e-36
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 5e-35
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 8e-35
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 9e-35
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 140 1e-33
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 3e-33
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 4e-33
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 6e-33
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 7e-33
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 7e-33
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 8e-33
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 1e-32
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 137 2e-32
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 4e-32
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 5e-32
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 6e-32
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 132 5e-31
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 129 4e-30
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 8e-30
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 8e-30
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 127 1e-29
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 2e-29
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 127 2e-29
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 2e-29
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 9e-29
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 124 1e-28
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 120 2e-27
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 8e-27
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 1e-26
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 115 6e-26
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 6e-26
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 114 1e-25
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 3e-25
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 3e-24
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 109 3e-24
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 106 3e-23
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 3e-22
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 4e-22
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 96 8e-20
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 94 2e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 93 4e-19
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 90 4e-18
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 89 7e-18
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 7e-17
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 81 2e-15
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 80 3e-15
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 79 5e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 5e-14
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 75 1e-13
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 74 2e-13
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 74 2e-13
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 73 4e-13
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 70 3e-12
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 69 6e-12
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-12
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-12
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 7e-12
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 68 1e-11
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 67 3e-11
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 67 3e-11
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 65 1e-10
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 64 1e-10
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 64 2e-10
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 64 3e-10
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 3e-10
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 63 5e-10
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 6e-10
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 62 8e-10
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 60 2e-09
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 60 2e-09
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 59 7e-09
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 58 1e-08
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 58 1e-08
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 58 1e-08
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 57 2e-08
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 56 5e-08
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 9e-08
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 55 1e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 54 2e-07
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 53 5e-07
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 52 7e-07
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 8e-07
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 52 1e-06
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-06
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 49 5e-06
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 49 5e-06
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 49 6e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-06
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 49 8e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 268 bits (684), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 145/452 (32%), Positives = 239/452 (52%), Gaps = 46/452 (10%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
+A +AV F +M+ RP P + FN + ++ + Y ++L +Q+E KGIA I TL+
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTT---------------------------- 120
I+INCFC +++YAFS +GKI+K Y+PDT
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 121 -------ALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGE 173
L TL+ GLCLNG++ A+ D + GFQ VTY ++N +C+ G+
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPN----EVTYGPVLNVMCKSGQ 243
Query: 174 TGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNT 231
T A++LLR++EE + D Y+ II +C+D + +A++L+NEM +K D+ TYNT
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 232 LIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKAS 291
LI GFC G+ M I P+V T LI + KE K+++A+ ++ M++
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 292 VEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAM 351
+ PN YN+LIDG+C N++ +A + M ++G PD+ T+NI+I+ C +N +D+ +
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423
Query: 352 SLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAI 406
LF M L+ + + TY+ L++G+ A L EM S ++Y LD +
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 407 CNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
C++ + +E F + +++ + D I I+
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 198/440 (45%), Gaps = 30/440 (6%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+ M+ M P + N ++ L AV L ++ G P+ T ++N
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C G+ A +L K+ +R + D + ++ GLC +G + +A N ++++ KGF+
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDA 210
+ +TY LI C G +LLR + + +V ++ +I S ++ + +A
Sbjct: 297 DI----ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
L EM+ + I+P+ TYN+LI GFC +L +A+ ++M + PD+ T + LI+
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
CK ++ + M V N YNTL+ G+C ++ A+ L M +R V PD
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
+ +Y I++ LC + +++A+ +F ++ ++ D Y I+I G N A +L
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Query: 391 EMCSNGI-----AYTSKLDAICNDYNFDDEIEKFMRYKETG----------------GDA 429
+ G+ AY + +C + F + E G GD
Sbjct: 533 SLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDD 592
Query: 430 DFLIASHIVLRNPSFKATGF 449
D A+ ++ K++GF
Sbjct: 593 DATTAAELI---EEMKSSGF 609
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 148/352 (42%), Gaps = 41/352 (11%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
NA + F+ M I +N ++G + L + + + I+P++ T ++LI
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ F G++ A +L ++++R P+T +L+ G C + AI D + +KG
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG-- 398
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSD 209
D +T+ LIN C+ L+L R++ + YNT+++ C+ +
Sbjct: 399 --CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEV 456
Query: 210 AYDLYNEMLLKRISPDVFTYNTL-----------------------------------IY 234
A L+ EM+ +R+ PD+ +Y L I+
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIH 516
Query: 235 GFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEP 294
G C ++ A F + ++ +K D + +I LC++ + +A+ + M + P
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAP 576
Query: 295 NVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNM 346
+ YN LI + + T A L M + G DV T ++I+ L + +
Sbjct: 577 DELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGEL 628
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 223/414 (53%), Gaps = 11/414 (2%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A++ F M+ RP P + F+ ++ R + + +QLEL GIA +I TL I+I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
NCFC + +A+SVLGK++K Y+PDTT TL+KGL L G++ A+ D + G Q
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSD 209
V VTY ++N +C G+T AL LLR++EE + DV Y+TII S+C D C+
Sbjct: 191 PDV----VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A L+ EM K I V TYN+L+ G C G+ M I P+V T + L+
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
KE K+++AN + MI + PN+ YNTL+DGYC+ N++++A + M +P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLL 389
D+ T+ +I C +D+ M +F + + + +A TYSIL++G+ A L
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 390 AEMCSNGI-----AYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
EM S+G+ Y LD +C++ + +E F +++ D ++ + I+
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 480
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 163/350 (46%), Gaps = 8/350 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
++ I+ SL R A+SL +++E KGI + T L+ C G+ N +L ++
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELC-- 169
R P+ L+ G+++ A + ++ +G + +TY L++ C
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI----ITYNTLMDGYCMQ 346
Query: 170 -EVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFT 228
+ E L L+ + + D+ + ++IK C K V D ++ + + + + T
Sbjct: 347 NRLSEANNMLDLMVR-NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
Y+ L+ GFC G+++ A F M + PDV T L+ LC K+++A + +
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Query: 289 KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMD 348
K+ ++ + +Y T+I+G C ++ A L ++ +GV P+V TY +MIS LC +
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525
Query: 349 EAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA 398
EA L M+ P+ TY+ LI L + L+ EM S G +
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 149/310 (48%), Gaps = 6/310 (1%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
+M+S P + FN +L V+ A L +++ +GI+P+I T L++ +C
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
R++ A ++L +++ PD T+L+KG C+ + + ++ +G
Sbjct: 346 QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN--- 402
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLY 214
+VTY L+ C+ G+ A +L +++ DV Y ++ +C++ + A +++
Sbjct: 403 -AVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
++ ++ + Y T+I G C GG++ A F + + +KP+V T +I LCK+
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY 334
+ +AN ++ M + PN YNTLI + +T + L M + G + D +
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 581
Query: 335 NIMISWLCTS 344
++I L ++
Sbjct: 582 KMVIDMLLSA 591
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 152/348 (43%), Gaps = 6/348 (1%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+S F M + + +N+++ L + + L + + + I P++ T +L++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
F G++ A + +++ R P+ TLM G C+ + A N D +
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDA 210
+ VT+ LI C V +++ R I + + Y+ +++ C+ + A
Sbjct: 367 DI----VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
+L+ EM+ + PDV TY L+ G C G+L KA+ F ++ + + +I
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
+CK KV+ A ++ ++ V+PNV Y +I G C +++A L M G P+
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLN 378
TYN +I + + L M DA + ++I+ L+
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/445 (31%), Positives = 228/445 (51%), Gaps = 38/445 (8%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+AV F M RP P + F+ + + R Y + L +Q+ELKGIA ++ TL+I+I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
NC C +++ AFS +GKI+K Y+PDT +TL+ GLCL G + A+ D + G +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 152 -----------------------FQVDRV--------SVTYRFLINELCEVGETGAALQL 180
+DR+ VTY ++ +C+ G+T A++L
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 181 LRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA 238
LR++EE D Y+ II +C+D + +A++L+NEM +K D+ Y TLI GFC
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 239 GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFI 298
G+ M I PDV LI KE K+++A + MI+ + P+
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 299 YNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
Y +LIDG+C NQ+ KA + M ++G P++ T+NI+I+ C +N++D+ + LF M
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFD 413
L+ + D TY+ LI+G+ L A L EM S ++Y LD +C++ +
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 414 DEIEKFMRYKETGGDADFLIASHIV 438
+E F + +++ + D I + I+
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIII 499
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 185/394 (46%), Gaps = 6/394 (1%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S + A+ M + +++ I+ L + A +L ++E+KG DI
Sbjct: 225 SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
T LI FC+ GR + +L ++KR PD A + L+ G++R A H ++
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCED 204
+G +VTY LI+ C+ + A +L + + +++ +N +I C+
Sbjct: 345 QRGISPD----TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 205 KCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTC 264
+ D +L+ +M L+ + D TYNTLI GFC G+L A F M ++PD+ +
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 265 DPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMAT 324
L+ LC + ++A + + K+ +E ++ IYN +I G C +++ A L ++
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 325 RGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMH 384
+GV PDV TYNIMI LC + EA LF M+ P+ TY+ILI L
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 385 AINLLAEMCSNGIAYTSKLDAICNDYNFDDEIEK 418
+ L+ E+ G + + + D D ++K
Sbjct: 581 SAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKK 614
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/448 (31%), Positives = 238/448 (53%), Gaps = 38/448 (8%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
+A +A+ F +M+ RP P + F+ + ++ + Y ++L +Q+ELKGIA ++ TL+
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
I+INCFC ++ AFS +GKI+K Y+P+T +TL+ GLCL G + A+ D +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 149 GFQ-----------------------FQVDRV--------SVTYRFLINELCEVGETGAA 177
G + +D++ +VTY ++N +C+ G+T A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 178 LQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYG 235
++LLR++EE + D Y+ II +C+ + +A++L+NEM +K I+ ++ TYN LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 236 FCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPN 295
FC G+ M I P+V T LI + KE K+++A + MI + P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 296 VFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFH 355
Y +LIDG+C N + KA + M ++G P++ T+NI+I+ C +N +D+ + LF
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 356 YMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCS-----NGIAYTSKLDAICNDY 410
M L+ + D TY+ LI+G+ L A L EM S N + Y LD +C++
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 411 NFDDEIEKFMRYKETGGDADFLIASHIV 438
+ +E F + +++ + D I + I+
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIII 515
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 179/371 (48%), Gaps = 6/371 (1%)
Query: 50 TQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGK 109
+++ I+ L + A +L ++E+KGI +I T ILI FC+ GR + +L
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 110 ILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELC 169
++KR P+ + L+ G++R A H ++ +G ++TY LI+ C
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD----TITYTSLIDGFC 379
Query: 170 EVGETGAALQLLRQIEEEHTD--VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVF 227
+ A Q++ + + D ++ +N +I C+ + D +L+ +M L+ + D
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 228 TYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
TYNTLI GFC G+L A F M + P++ T L+ LC + ++A + +
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 288 IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMM 347
K+ +E ++ IYN +I G C +++ A L ++ +GV P V TYNIMI LC +
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 348 DEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKLDAIC 407
EA LF M+ PD TY+ILI L ++ L+ E+ G + + +
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Query: 408 NDYNFDDEIEK 418
D D ++K
Sbjct: 620 IDMLSDGRLKK 630
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 6/227 (2%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
AP + +++ + NH A + + KG P+I T ILIN +C R++
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+ K+ R DT TL++G C G++ A ++ ++ + VTY+ L+
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI----VTYKILL 480
Query: 166 NELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
+ LC+ GE+ AL++ +IE+ D+ +YN II MC V DA+DL+ + LK +
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
P V TYN +I G C G L +A F M+ + PD T + LI A
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 40/261 (15%)
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
Y ++S D DA DL+ +M+ R P V ++ L Q + M+
Sbjct: 56 YRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQME 115
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
++ I ++ T +I+ C+ RK+ A S + +IK EPN ++TLI+G CL +++
Sbjct: 116 LKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS 175
Query: 314 KARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE------------------------ 349
+A L M G PD+ T N +++ LC S E
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 235
Query: 350 -----------AMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM-----C 393
AM L M+ ++IK DA YSI+I+G +A NL EM
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 394 SNGIAYTSKLDAICNDYNFDD 414
+N I Y + CN +DD
Sbjct: 296 TNIITYNILIGGFCNAGRWDD 316
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 138/434 (31%), Positives = 214/434 (49%), Gaps = 42/434 (9%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A+ F +M+ RP P FN + ++ R Y + + +EL GI D+ T+TI+I
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKA---- 147
NC+C ++ +AFSVLG+ K Y+PDT +TL+ G CL G + A+ D +
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 148 ---------------KG--------------FQFQVDRVSVTYRFLINELCEVGETGAAL 178
KG + FQ D VTY ++N LC+ G + AL
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDE--VTYGPVLNRLCKSGNSALAL 230
Query: 179 QLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGF 236
L R++EE + V Y+ +I S+C+D DA L+NEM +K I DV TY++LI G
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 237 CAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNV 296
C G+ M NI PDV T LI KE K+ +A + MI + P+
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 297 FIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHY 356
YN+LIDG+C N + +A + M ++G PD+ TY+I+I+ C + +D+ M LF
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 357 MDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYN 411
+ K + P+ TY+ L+ G+ A L EM S G + Y LD +C++
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 412 FDDEIEKFMRYKET 425
+ +E F + +++
Sbjct: 471 LNKALEIFEKMQKS 484
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 186/394 (47%), Gaps = 6/394 (1%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S + A+ F M + Q++ ++ SL + + A+SL ++E+KGI D+ T
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
+ LI C+ G+ + +L +++ R PD + L+ G++ A ++++
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCED 204
+G ++TY LI+ C+ A Q+ + + D+ Y+ +I S C+
Sbjct: 343 TRGIAPD----TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 205 KCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTC 264
K V D L+ E+ K + P+ TYNTL+ GFC G+L A F M + P V T
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 265 DPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMAT 324
L+ LC ++ +A + M K+ + + IYN +I G C +++ A L +++
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 325 RGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMH 384
+GV PDV TYN+MI LC + EA LF M PD TY+ILI L +
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 578
Query: 385 AINLLAEMCSNGIAYTSKLDAICNDYNFDDEIEK 418
++ L+ EM G + S + D D ++K
Sbjct: 579 SVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDK 612
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 15/271 (5%)
Query: 183 QIEEEHTDVQMYNTI----------IKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL 232
QI E+ T + Y++I +++ D V+DA DL+ M+ R P +N L
Sbjct: 17 QILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRL 76
Query: 233 IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASV 292
Q +GF M++ I+ D+ T +I+ C+++K+ A SV+ K
Sbjct: 77 CSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGY 136
Query: 293 EPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMS 352
EP+ ++TL++G+CL ++++A L M PD+ T + +I+ LC + EA+
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 353 LFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLDAIC 407
L M +PD TY ++ + A++L +M I Y+ +D++C
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 408 NDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
D +FDD + F + G AD + S ++
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 134/416 (32%), Positives = 225/416 (54%), Gaps = 38/416 (9%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+AV+ F +M+ RP P I +F+ +L ++ +MN + +SL +Q++ GI+ ++ T +ILI
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
NCFC +++ A +VL K++K Y+PD L +L+ G C I A++ + G+Q
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 152 -------------FQVDRVS------------------VTYRFLINELCEVGETGAALQL 180
F+ +R S VTY ++N LC+ G+ AL L
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 181 LRQIEEEHTD--VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA 238
L+++E+ + V +YNTII ++C K V+DA +L+ EM K I P+V TYN+LI C
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 239 GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFI 298
G+ A + M I P+V T LI A KE K+ +A + MIK S++P++F
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 299 YNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
Y++LI+G+C+ +++ +A+ + M ++ P+V TYN +I C + +DE M LF M
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICND 409
+ + + TY+ LI G+ +A + +M S+G+ Y+ LD +CN+
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 204/418 (48%), Gaps = 16/418 (3%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+AVS M+ M P FN ++ L R N AV+L ++ +KG PD+ T I++
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N C G ++ A S+L K+ + +P T++ LC + A+N ++ KG +
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSD 209
V VTY LI LC G A +LL + E + +V ++ +I + ++ + +
Sbjct: 289 PNV----VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 344
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A LY+EM+ + I PD+FTY++LI GFC +L +A F +M ++ P+V T + LI
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
CK ++V + + M + + N Y TLI G+ + A+ + M + GV P
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLL 389
D+ TY+I++ LC + ++ A+ +F Y+ ++PD TY+I+IEG +L
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 390 AEMCSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYKETG-----GDADFLIASHI 437
+ G + YT+ + C ++ F KE G G + LI +H+
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHL 582
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 178/365 (48%), Gaps = 8/365 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+S M + P + +N I+ +L + A++L +++ KGI P++ T LI
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C C+ GR + A +L +++R P+ + L+ G++ A +D++ +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR---- 355
Query: 153 QVDRVSVTYRFLINELC---EVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSD 209
+D TY LIN C + E +L+ ++ +V YNT+IK C+ K V +
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
+L+ EM + + + TY TLI+GF + A F M + + PD+ T L+
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
LC KV+ A V + ++ +EP+++ YN +I+G C ++ L +++ +GV P
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLL 389
+V TY M+S C + +EA +LF M + PD+ TY+ LI L + L+
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Query: 390 AEMCS 394
EM S
Sbjct: 595 REMRS 599
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 5/198 (2%)
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
IS +++TY+ LI FC QL A+ M +PD+ T + L++ C ++ A
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
S+V M++ +P+ F +NTLI G N+ ++A L M +G PD+ TY I+++ L
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 342 CTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI---- 397
C +D A+SL M+ I+P Y+ +I+ N + A+NL EM + GI
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 398 -AYTSKLDAICNDYNFDD 414
Y S + +CN + D
Sbjct: 292 VTYNSLIRCLCNYGRWSD 309
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 144/322 (44%), Gaps = 16/322 (4%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A +M+ + P + F+ ++ + V+ A L ++ + I PDI T + LI
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N FC R++ A + ++ + P+ TL+KG C + + ++ +G
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSD 209
+VTY LI+ + E A + +Q+ + D+ Y+ ++ +C + V
Sbjct: 429 GN----TVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A ++ + ++ PD++TYN +I G C G++ F + ++ +KP+V T ++
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC----------LINQMTKARFLS 319
C++ ++A+++ M + P+ YNTLI + LI +M RF+
Sbjct: 545 GFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 604
Query: 320 HTMATRGVTPDVHTYNIMISWL 341
VT +H + S+L
Sbjct: 605 DASTIGLVTNMLHDGRLDKSFL 626
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 5/238 (2%)
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
Y I + D + DA +L+ +M+ R P + ++ L+ + + M+
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
I ++ T LI+ C+ ++ A +V+A M+K EP++ N+L++G+C N+++
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 314 KARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
A L M G PD T+N +I L N EA++L M +K +PD TY I++
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 374 EGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLDAICNDYNFDDEIEKFMRYKETG 426
G A++LL +M I Y + +DA+CN N +D + F G
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 6/242 (2%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
V A + M+ P I +++++ + A + + + K P++ T L
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
I FC R++ + ++ +R +T TTL+ G E +A + + G
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVS 208
+ +TY L++ LC G+ AL + ++ D+ YN +I+ MC+ V
Sbjct: 463 LPDI----MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
D +DL+ + LK + P+V TY T++ GFC G +A F MK E PD T + LI
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 269 HA 270
A
Sbjct: 579 RA 580
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 4/159 (2%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
+ E NA F M+S P I ++ +L L TA+ + + L+ + PDI T
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
I+I C G++ + + + + +P+ TT+M G C G A ++K
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIE 185
+G S TY LI G+ A+ +L+R++
Sbjct: 564 EEGPLPD----SGTYNTLIRAHLRDGDKAASAELIREMR 598
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/426 (30%), Positives = 223/426 (52%), Gaps = 38/426 (8%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A+ F M+ RP P I +FN +L ++ +M + +SL ++++ I + T ILI
Sbjct: 68 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
NCFC +++ A ++LGK++K Y+P L++L+ G C I A+ D + G++
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 152 FQ-----------------------VDRVS--------VTYRFLINELCEVGETGAALQL 180
VDR+ VTY ++N LC+ G+T AL L
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 181 LRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA 238
L ++E DV ++NTII S+C+ + V DA +L+ EM K I P+V TY++LI C+
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 239 GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFI 298
G+ A + M + I P++ T + LI A KE K +A + MIK S++P++F
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 299 YNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
YN+L++G+C+ +++ KA+ + M ++ PDV TYN +I C S +++ LF M
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFD 413
+ + D TY+ LI+G + +A + +M S+G+ Y+ LD +CN+ +
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 414 DEIEKF 419
+E F
Sbjct: 488 KALEVF 493
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 178/364 (48%), Gaps = 6/364 (1%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A++ + M + + + FN I+ SL + H A++L +++E KGI P++ T + LI+
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C C GR + A +L ++++ P+ L+ G+ A +DD+ +
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM----IKR 359
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDA 210
+D TY L+N C A Q+ + + DV YNT+IK C+ K V D
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
+L+ EM + + D TY TLI G G A F M + + PD+ T L+
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
LC K+++A V M K+ ++ +++IY T+I+G C ++ L +++ +GV P+
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
V TYN MIS LC+ ++ EA +L M P++ TY+ LI L + L+
Sbjct: 540 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 599
Query: 391 EMCS 394
EM S
Sbjct: 600 EMRS 603
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 172/402 (42%), Gaps = 41/402 (10%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+AV+ M+ M P F ++ L N AV+L ++ +G P++ T +++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N C G + A ++L K+ + D T++ LC + A+N +++ KG +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCEDKCVSD 209
V VTY LI+ LC G A QLL + E+ + + +N +I + ++ +
Sbjct: 293 PNV----VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Query: 210 AYDLYNEMLLKRISPDVFTYN-----------------------------------TLIY 234
A LY++M+ + I PD+FTYN TLI
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408
Query: 235 GFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEP 294
GFC ++ F M + D T LI L + A V M+ V P
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Query: 295 NVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLF 354
++ Y+ L+DG C ++ KA + M + D++ Y MI +C + +D+ LF
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
Query: 355 HYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
+ LK +KP+ TY+ +I G + A LL +M +G
Sbjct: 529 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 138/300 (46%), Gaps = 16/300 (5%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A +M+ + P + FN ++ + V+ + A L + + I PDI T L+
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N FC R++ A + ++ + PD TL+KG C + + ++ +G
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSD 209
+VTY LI L G+ A ++ +Q+ + D+ Y+ ++ +C + +
Sbjct: 433 GD----TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 488
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A ++++ M I D++ Y T+I G C G++ F + ++ +KP+V T + +I
Sbjct: 489 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 548
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC----------LINQMTKARFLS 319
LC +R +++A +++ M + PN YNTLI + LI +M RF+
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 608
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 110/238 (46%), Gaps = 5/238 (2%)
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
Y I+++ D + DA L+ M+ R P + +N L+ + + M+
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
I + T + LI+ C+ ++ A +++ M+K EP++ ++L++GYC +++
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 314 KARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
A L M G PD T+ +I L N EA++L M + +P+ TY +++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 374 EGWLNLPHYMHAINLL-----AEMCSNGIAYTSKLDAICNDYNFDDEIEKFMRYKETG 426
G A+NLL A++ ++ + + + +D++C + DD + F + G
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 94/233 (40%), Gaps = 6/233 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A F M+S P + +N ++ + L +++ +G+ D T T LI
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
H G + A V +++ PD + L+ GLC NG++ A+ D ++ +
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLL--RQIEEEHTDVQMYNTIIKSMCEDKCVSDA 210
+ Y +I +C+ G+ L ++ +V YNT+I +C + + +A
Sbjct: 504 DI----YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVST 263
Y L +M P+ TYNTLI G + M+ D ST
Sbjct: 560 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 132/416 (31%), Positives = 221/416 (53%), Gaps = 38/416 (9%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+AV F +M+ RP P I +FN +L ++ +MN + +SL +Q++ GI+ D+ T +I I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
NCFC +++ A +VL K++K Y+PD L++L+ G C + I A+ D + G++
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 152 -------------FQVDRVS------------------VTYRFLINELCEVGETGAALQL 180
F ++ S VTY ++N LC+ G+ AL L
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 181 LRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA 238
L+++E+ DV +YNTII +C+ K + DA +L+ EM K I PDVFTY++LI C
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 239 GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFI 298
G+ A + M I P+V T LI A KE K+ +A + MIK S++P++F
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 299 YNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
Y++LI+G+C+ +++ +A+ + M ++ P+V TY+ +I C + ++E M LF M
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICND 409
+ + + TY+ LI G+ +A + +M S G+ Y LD +C +
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Score = 181 bits (459), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 194/407 (47%), Gaps = 11/407 (2%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S +AV+ M+ M P F ++ L N AV+L Q+ +G PD+ T
Sbjct: 166 SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
++N C G ++ A S+L K+ K + D T++ GLC + A+N ++
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCED 204
KG + V TY LI+ LC G A +LL + E + +V ++ +I + ++
Sbjct: 286 NKGIRPDV----FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 205 KCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTC 264
+ +A LY+EM+ + I PD+FTY++LI GFC +L +A F +M ++ P+V T
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 265 DPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMAT 324
LI CK ++V++ + M + + N Y TLI G+ A+ + M +
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Query: 325 RGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMH 384
GV P++ TYNI++ LC + + +AM +F Y+ ++PD TY+I+IEG
Sbjct: 462 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521
Query: 385 AINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYKETG 426
L + G IAY + + C + ++ + KE G
Sbjct: 522 GWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 186/389 (47%), Gaps = 8/389 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+S M + + +N I+ L + H A++L +++ KGI PD+ T + LI+
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C C+ GR + A +L +++R P+ + L+ G++ A +D++ +
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM----IKR 357
Query: 153 QVDRVSVTYRFLINELC---EVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSD 209
+D TY LIN C + E +L+ ++ +V Y+T+IK C+ K V +
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
+L+ EM + + + TY TLI+GF A F M + P++ T + L+
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
LCK K+ +A V + ++++EP+++ YN +I+G C ++ L ++ +GV+P
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP 536
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLL 389
+V YN MIS C +EA SL M P++ TY+ LI L + L+
Sbjct: 537 NVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELI 596
Query: 390 AEMCSNGIAYTSKLDAICNDYNFDDEIEK 418
EM S G A + + + D ++K
Sbjct: 597 KEMRSCGFAGDASTIGLVTNMLHDGRLDK 625
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 41/262 (15%)
Query: 194 YNTIIKSMCEDKC-VSDAYDLYNEMLLKR------------------------------- 221
Y I+++ D V DA DL+ +M+ R
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 222 ----ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
IS D++TY+ I FC QL A+ M +PD+ T L++ C +++
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIM 337
A ++V M++ +P+ F + TLI G L N+ ++A L M RG PD+ TY +
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 338 ISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
++ LC +D A+SL M+ I+ D Y+ +I+G H A+NL EM + GI
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 398 -----AYTSKLDAICNDYNFDD 414
Y+S + +CN + D
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSD 311
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 6/259 (2%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
V A + M+ P I +++++ + A + + + K P++ T + L
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
I FC R+ + ++ +R +T TTL+ G + +A + + G
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVS 208
+ +TY L++ LC+ G+ A+ + ++ D+ YN +I+ MC+ V
Sbjct: 465 HPNI----LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
D ++L+ + LK +SP+V YNT+I GFC G +A MK + P+ T + LI
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 269 HALCKERKVKQANSVVAAM 287
A ++ + + ++ M
Sbjct: 581 RARLRDGDREASAELIKEM 599
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 218/415 (52%), Gaps = 38/415 (9%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
AV F M+ RP P I +F+ +L ++ +M + +S +++E+ G++ ++ T I+IN
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ- 151
C C ++++A ++LGK++K Y P L +L+ G C I A+ D + G+Q
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 152 ------------FQVDRVS------------------VTYRFLINELCEVGETGAALQLL 181
FQ ++ S VTY +IN LC+ GE AL LL
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 182 RQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAG 239
++E+ DV +Y+T+I S+C+ + V DA +L+ EM K I PDVFTY++LI C
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 240 GQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIY 299
G+ A + M I P+V T + LI A KE K+ +A + MI+ S++PN+ Y
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 300 NTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDL 359
N+LI+G+C+ +++ +A+ + M ++ PDV TYN +I+ C + + + M LF M
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 360 KDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICND 409
+ + + TY+ LI G+ +A + +M S+G+ Y + LD +C +
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 186/388 (47%), Gaps = 6/388 (1%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A++ + M + + ++ ++ SL + H A++L +++ KGI PD+ T + LI+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C C+ GR + A +L +L+R P+ +L+ G++ A D++ Q
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM----IQR 339
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDA 210
+D VTY LIN C A Q+ + + DV YNT+I C+ K V D
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
+L+ +M + + + TY TLI+GF A F M + + P++ T + L+
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
LCK K+++A V + K+ +EP+++ YN + +G C ++ L +++ +GV PD
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
V YN MIS C + +EA +LF M PD+ TY+ LI L + L+
Sbjct: 520 VIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 579
Query: 391 EMCSNGIAYTSKLDAICNDYNFDDEIEK 418
EM S A + + D D ++K
Sbjct: 580 EMRSCRFAGDASTYGLVTDMLHDGRLDK 607
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 8/283 (2%)
Query: 26 FSHEA--VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPD 83
F+ E + A F M+ P I +N+++ + A + + K PD
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 84 IATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHD 143
+ T LIN FC ++ + + +R +T TTL+ G + +A
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 144 DVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSM 201
+ + G + +TY L++ LC+ G+ A+ + +++ D+ YN + + M
Sbjct: 440 QMVSDGVHPNI----MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 202 CEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDV 261
C+ V D +DL+ + LK + PDV YNT+I GFC G +A F MK + PD
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDS 555
Query: 262 STCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLID 304
T + LI A ++ + ++ M + Y + D
Sbjct: 556 GTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 598
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 112/237 (47%), Gaps = 5/237 (2%)
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+ +A DL+ EM+ R P + ++ L+ + + F M++ + ++ T +
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
+I+ LC+ ++ A +++ M+K P++ N+L++G+C N++++A L M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
PD T+ ++ L N EA++L M +K +PD TY +I G A+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 387 NLLAEMCSNGIA-----YTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
NLL +M I Y++ +D++C + DD + F G D S ++
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 218/416 (52%), Gaps = 38/416 (9%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+AV+ F M+ RP P I +F+ +L ++ +MN + +SL +Q++ GI + T +ILI
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
NCFC ++ A +VLGK++K Y+P+ L++L+ G C + I A+ D + G+Q
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 152 FQ-----------------------VDRVS--------VTYRFLINELCEVGETGAALQL 180
+DR+ VTY ++N LC+ G+T A L
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 181 LRQIEEEHTD--VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA 238
L ++E+ + V +YNTII +C+ K + DA +L+ EM K I P+V TY++LI C
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 239 GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFI 298
G+ A + M I PDV T LI A KE K+ +A + M+K S++P++
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363
Query: 299 YNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
Y++LI+G+C+ +++ +A+ + M ++ PDV TYN +I C ++E M +F M
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICND 409
+ + + TY+ILI+G A + EM S+G+ Y + LD +C +
Sbjct: 424 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 186/388 (47%), Gaps = 6/388 (1%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A + + M + P + +N I+ L + H A++L +++E KGI P++ T + LI+
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C C+ GR + A +L +++R PD + L+ G++ A +D++ +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR---- 355
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDA 210
+D VTY LIN C A Q+ + +H DV YNT+IK C+ K V +
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
+++ EM + + + TYN LI G G A F M + + P++ T + L+
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
LCK K+++A V + ++ +EP ++ YN +I+G C ++ L ++ +GV PD
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
V YN MIS C +EA +LF M P++ Y+ LI L + L+
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 391 EMCSNGIAYTSKLDAICNDYNFDDEIEK 418
EM S G A + + + D ++K
Sbjct: 596 EMRSCGFAGDASTIGLVTNMLHDGRLDK 623
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 6/259 (2%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
V A + M+ P I +++++ + A + + + K PD+ T L
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
I FC R+ V ++ +R +T L++GL G+ A ++ + G
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTD--VQMYNTIIKSMCEDKCVS 208
+ +TY L++ LC+ G+ A+ + ++ + + YN +I+ MC+ V
Sbjct: 463 PPNI----MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
D +DL+ + LK + PDV YNT+I GFC G +A F MK + P+ + LI
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 269 HALCKERKVKQANSVVAAM 287
A ++ + + ++ M
Sbjct: 579 RARLRDGDREASAELIKEM 597
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 5/225 (2%)
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+ DA L+ EM+ R P + ++ L+ + + M+ I + T
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
LI+ C+ ++ A +V+ M+K EPN+ ++L++GYC ++++A L M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
P+ T+N +I L N EAM+L M K +PD TY +++ G A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 387 NLLAEMCSNGIA-----YTSKLDAICNDYNFDDEIEKFMRYKETG 426
NLL +M + Y + +D +C + DD + F + G
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 220/418 (52%), Gaps = 38/418 (9%)
Query: 40 MLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGR 99
M+ RP P I +FN +L ++ +M + +SL ++++ GI+ ++ T ILINCFC +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 100 MNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQ------ 153
++ A ++LGK++K Y+P L++L+ G C I A+ D + G++
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 154 -----------------VDRVS--------VTYRFLINELCEVGETGAALQLLRQIEEE- 187
VDR+ VTY ++N LC+ G+ A LL ++E
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 188 -HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAV 246
DV ++NTII S+C+ + V DA +L+ EM K I P+V TY++LI C+ G+ A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 247 GFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGY 306
+ M + I P++ T + LI A KE K +A + MIK S++P++F YN+LI+G+
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 307 CLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDA 366
C+ +++ KA+ + M ++ PD+ TYN +I C S +++ LF M + + D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 367 ETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKF 419
TY+ LI+G + +A + +M S+G+ Y+ LD +CN+ + +E F
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 177/364 (48%), Gaps = 6/364 (1%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A + + M + + + FN I+ SL + H A++L +++E KGI P++ T + LI+
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C C GR + A +L ++++ P+ L+ G+ A HDD+ +
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM----IKR 284
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDA 210
+D TY LIN C A Q+ + + D+ YNT+IK C+ K V D
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
+L+ EM + + D TY TLI G G A F M + + PD+ T L+
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
LC K+++A V M K+ ++ +++IY T+I+G C ++ L +++ +GV P+
Sbjct: 405 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
V TYN MIS LC+ ++ EA +L M PD+ TY+ LI L + L+
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIR 524
Query: 391 EMCS 394
EM S
Sbjct: 525 EMRS 528
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 197/418 (47%), Gaps = 16/418 (3%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+AV+ M+ M P F ++ L N AV+L ++ +G P++ T +++
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 157
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N C G ++ AF++L K+ + D T++ LC + A+N +++ KG +
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCEDKCVSD 209
V VTY LI+ LC G A QLL + E+ + + +N +I + ++ +
Sbjct: 218 PNV----VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A L+++M+ + I PD+FTYN+LI GFC +L KA F M ++ PD+ T + LI
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
CK ++V+ + M + + Y TLI G A+ + M + GV P
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLL 389
D+ TY+I++ LC + +++A+ +F YM +IK D Y+ +IEG +L
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 390 AEMCSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYKETG-----GDADFLIASHI 437
+ G + Y + + +C+ + + KE G G + LI +H+
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 138/300 (46%), Gaps = 16/300 (5%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A +M+ + P + FN ++ + V+ + A L + + I PDI T LI
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N FC R++ A + ++ + PD TL+KG C + + ++ +G
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSD 209
+VTY LI L G+ A ++ +Q+ + D+ Y+ ++ +C + +
Sbjct: 358 GD----TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A ++++ M I D++ Y T+I G C G++ F + ++ +KP+V T + +I
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC----------LINQMTKARFLS 319
LC +R +++A +++ M + P+ YNTLI + LI +M RF+
Sbjct: 474 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 533
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 6/233 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A F M+S P + +N ++ + L +++ +G+ D T T LI
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
H G + A V +++ PD + L+ GLC NG++ A+ D ++ +
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLL--RQIEEEHTDVQMYNTIIKSMCEDKCVSDA 210
+ Y +I +C+ G+ L ++ +V YNT+I +C + + +A
Sbjct: 429 DI----YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVST 263
Y L +M PD TYNTLI G + M+ D ST
Sbjct: 485 YALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 537
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 215/414 (51%), Gaps = 38/414 (9%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+AV F M+ RP P I +FN +L ++ +MN + +SL ++++ I+ D+ + ILI
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDV------ 145
NCFC ++ A +VLGK++K Y+PD L++L+ G C I A+ D +
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182
Query: 146 -----------------KAKGFQFQVDRVSV--------TYRFLINELCEVGETGAALQL 180
KA +DR+ TY ++N LC+ G+ AL L
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 181 LRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA 238
L+++E+ DV +Y TII ++C K V+DA +L+ EM K I P+V TYN+LI C
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 239 GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFI 298
G+ A + M I P+V T LI A KE K+ +A + MIK S++P++F
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 299 YNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
Y++LI+G+C+ +++ +A+ + M ++ P+V TYN +I C + ++E M LF M
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAIC 407
+ + + TY+ LI+G A + +M S+G I Y+ LD +C
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 193/401 (48%), Gaps = 11/401 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
AV+ M M P FN ++ L N AV+L ++ +G PD+ T ++N
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 228
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C G ++ A S+L K+ K + D TT++ LC + A+N ++ KG +
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDA 210
V VTY LI LC G A +LL + E + +V ++ +I + ++ + +A
Sbjct: 289 NV----VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
LY+EM+ + I PD+FTY++LI GFC +L +A F +M ++ P+V T + LI
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
CK ++V++ + M + + N YNTLI G A+ + M + GV PD
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
+ TY+I++ LC +++A+ +F Y+ ++PD TY+I+IEG +L
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 391 EMCSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYKETG 426
+ G I YT+ + C ++ F KE G
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 176/367 (47%), Gaps = 8/367 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+S M + + + I+ +L + A++L +++ KGI P++ T LI
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C C+ GR + A +L +++R P+ + L+ G++ A +D++ +
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM----IKR 354
Query: 153 QVDRVSVTYRFLINELC---EVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSD 209
+D TY LIN C + E +L+ ++ +V YNT+IK C+ K V +
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
+L+ EM + + + TYNTLI G G A F M + + PD+ T L+
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
LCK K+++A V + K+ +EP+++ YN +I+G C ++ L +++ +GV P
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLL 389
+V Y MIS C + +EA +LF M P++ TY+ LI L + L+
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI 593
Query: 390 AEMCSNG 396
EM S G
Sbjct: 594 KEMRSCG 600
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 5/199 (2%)
Query: 221 RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQA 280
RIS D+++YN LI FC QL A+ M +PD+ T L++ C +++ +A
Sbjct: 110 RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 169
Query: 281 NSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISW 340
++V M +PN +NTLI G L N+ ++A L M RG PD+ TY +++
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 229
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI--- 397
LC +D A+SL M+ I+ D Y+ +I+ N + A+NL EM + GI
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 398 --AYTSKLDAICNDYNFDD 414
Y S + +CN + D
Sbjct: 290 VVTYNSLIRCLCNYGRWSD 308
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 6/259 (2%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
V A + M+ P I +++++ + A + + + K P++ T L
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
I FC R+ + ++ +R +T TL++GL G+ A + + G
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVS 208
+ +TY L++ LC+ G+ AL + +++ D+ YN +I+ MC+ V
Sbjct: 462 PPDI----ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
D +DL+ + LK + P+V Y T+I GFC G +A F MK + P+ T + LI
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 269 HALCKERKVKQANSVVAAM 287
A ++ + ++ M
Sbjct: 578 RARLRDGDKAASAELIKEM 596
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 220/426 (51%), Gaps = 38/426 (8%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+AV F +M+ RP P I +FN +L ++ +MN + +SL +Q++ GI+ D+ T +I I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
NCFC +++ A +VL K++K Y+PD L++L+ G C + I A+ D + G++
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 152 -------------FQVDRVS------------------VTYRFLINELCEVGETGAALQL 180
F ++ S VTY ++N LC+ G+ AL L
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 181 LRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA 238
L ++E +V ++NTII S+C+ + V A DL+ EM K I P+V TYN+LI C
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN 305
Query: 239 GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFI 298
G+ A + M + I P+V T + LI A KE K+ +A + MI+ S++P+
Sbjct: 306 YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT 365
Query: 299 YNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
YN LI+G+C+ N++ +A+ + M ++ P++ TYN +I+ C +++ + LF M
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMS 425
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFD 413
+ + + TY+ +I+G+ A + +M SN + Y+ L +C+ D
Sbjct: 426 QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD 485
Query: 414 DEIEKF 419
+ F
Sbjct: 486 TALVIF 491
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 189/388 (48%), Gaps = 9/388 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A++ + M + R + FN I+ SL + H AV L ++E KGI P++ T LIN
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C C+ GR + A +L +L++ P+ L+ G++ A H+++ Q
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM----IQR 357
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDA 210
+D ++TY LIN C A Q+ + + + ++Q YNT+I C+ K V D
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
+L+ EM + + + TY T+I GF G A F M + D+ T L+H
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
LC K+ A + + K+ +E N+FIYNT+I+G C ++ +A L +++ + PD
Sbjct: 478 LCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPD 534
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
V TYN MIS LC+ ++ EA LF M P++ TY+ LI L + L+
Sbjct: 535 VVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIK 594
Query: 391 EMCSNGIAYTSKLDAICNDYNFDDEIEK 418
EM S+G + ++ + D ++K
Sbjct: 595 EMRSSGFVGDASTISLVTNMLHDGRLDK 622
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 41/262 (15%)
Query: 194 YNTIIKSMCEDKC-VSDAYDLYNEMLLKR------------------------------- 221
Y I+++ D V DA DL+ +M+ R
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 222 ----ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
IS D++TY+ I FC QL A+ M +PD+ T L++ C +++
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIM 337
A ++V M++ +P+ F + TLI G L N+ ++A L M RG PD+ TY +
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 338 ISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
++ LC +D A++L + M+ IK + ++ +I+ H A++L EM + GI
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 398 -----AYTSKLDAICNDYNFDD 414
Y S ++ +CN + D
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSD 311
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 9/242 (3%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
V A M+ P +N ++ N A + + + K P+I T L
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTL 404
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
IN FC R+ + ++ +R +T TT+++G G+ SA + +
Sbjct: 405 INGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN-- 462
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLR--QIEEEHTDVQMYNTIIKSMCEDKCVS 208
+V +TY L++ LC G+ AL + + Q E ++ +YNT+I+ MC+ V
Sbjct: 463 --RVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
+A+DL+ + +K PDV TYNT+I G C+ L++A F MK + P+ T + LI
Sbjct: 521 EAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Query: 269 HA 270
A
Sbjct: 578 RA 579
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 140/469 (29%), Positives = 224/469 (47%), Gaps = 74/469 (15%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A+ F +M+ RP P I +F+ +L ++ +MN + +SL +Q++ GI+ ++ T +I I
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N FC +++ A ++LGK++K Y P L +L+ G C I A+ D + G+Q
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 152 -------------FQVDRVS------------------VTYRFLINELCEVGETGAALQL 180
FQ ++ S VTY +IN LC+ GE AL L
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 181 LRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA 238
L ++E+ DV +YNTII +C+ K + DA+DL+N+M K I PDVFTYN LI C
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 239 GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKAS-VEPNVF 297
G+ A + M +NI PD+ + LI A KE K+ +A + M+K+ P+V
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357
Query: 298 IYNTLIDGYC----------LINQMTKARFLSHT-------------------------M 322
YNTLI G+C + +M++ + +T M
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Query: 323 ATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHY 382
+ GV PD+ TYNI++ LC + ++ A+ +F YM +D+K D TY+ +IE
Sbjct: 418 VSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477
Query: 383 MHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYKETG 426
+L + G + YT+ + C ++ F+ KE G
Sbjct: 478 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 183/424 (43%), Gaps = 42/424 (9%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
AV+ M+ M P F ++ L + N AV+L +++ +KG PD+ T +IN
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C G + A ++L K+ K + D T++ GLC + A + + ++ KG +
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT----------------------- 189
V TY LI+ LC G A +LL + E++
Sbjct: 284 DV----FTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 190 ---------------DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIY 234
DV YNT+IK C+ K V + +++ EM + + + TY TLI+
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 235 GFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEP 294
GF A F M + + PD+ T + L+ LC V+ A V M K ++
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 295 NVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLF 354
++ Y T+I+ C ++ L +++ +GV P+V TY M+S C + +EA +LF
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 355 HYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKLDAICNDYNFDD 414
M P++ TY+ LI L + L+ EM S G A + + + D
Sbjct: 520 VEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDG 579
Query: 415 EIEK 418
++K
Sbjct: 580 RLDK 583
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 155/339 (45%), Gaps = 18/339 (5%)
Query: 99 RMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVS 158
+++ A + G ++K P + L+ + + +N D V + G Q Q +S
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAI-------AKMNKFDLVISLGEQMQNLGIS 107
Query: 159 ---VTYRFLINELCEVGETGAALQLLRQIEE--EHTDVQMYNTIIKSMCEDKCVSDAYDL 213
TY IN C + AL +L ++ + + N+++ C +S+A L
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167
Query: 214 YNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCK 273
++M+ PD T+ TL++G + +AV M ++ +PD+ T +I+ LCK
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 274 ERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHT 333
+ A +++ M K +E +V IYNT+IDG C M A L + M T+G+ PDV T
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 334 YNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMC 393
YN +IS LC +A L M K+I PD ++ LI+ ++ + A L EM
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 394 SNG------IAYTSKLDAICNDYNFDDEIEKFMRYKETG 426
+ +AY + + C ++ +E F + G
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 106/233 (45%), Gaps = 5/233 (2%)
Query: 199 KSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
+ + +D + DA L+ +M+ R P + ++ L+ + + M+ I
Sbjct: 48 RKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFL 318
++ T I+ C+ ++ A +++ M+K P++ N+L++G+C N++++A L
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167
Query: 319 SHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLN 378
M G PD T+ ++ L N EA++L M +K +PD TY +I G
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 379 LPHYMHAINLLAEMCSNGIA-----YTSKLDAICNDYNFDDEIEKFMRYKETG 426
A+NLL +M I Y + +D +C + DD + F + + G
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 220/426 (51%), Gaps = 38/426 (8%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A+ F M+ RP P I +FN +L ++ +M + +SL ++++ GI+ ++ T ILI
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
NCFC +++ A ++LGK++K Y+P L++L+ G C I A+ D + G++
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 152 FQ-----------------------VDRVS--------VTYRFLINELCEVGETGAALQL 180
VDR+ VTY ++N LC+ G+ A L
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 181 LRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA 238
L ++E +V +Y+T+I S+C+ + DA +L+ EM K + P+V TY++LI C
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307
Query: 239 GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFI 298
+ A + M I P+V T + LI A KE K+ +A + MIK S++P++F
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 299 YNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
Y++LI+G+C+ +++ +A+ + M ++ P+V TYN +I+ C + +DE + LF M
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFD 413
+ + + TY+ LI G+ +A + +M S+G+ Y + LD +C + +
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 414 DEIEKF 419
+ F
Sbjct: 488 KAMVVF 493
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 179/402 (44%), Gaps = 41/402 (10%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+AV+ M+ M P F ++ L N AV+L ++ +G P++ T +++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N C G ++ AF++L K+ + + +T++ LC A+N +++ KG +
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSD 209
V +TY LI+ LC A +LL + E + +V +N +I + ++ + +
Sbjct: 293 PNV----ITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 210 AYDLYNEMLLKRISPDVFTY-----------------------------------NTLIY 234
A LY+EM+ + I PD+FTY NTLI
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 235 GFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEP 294
GFC ++ + V F M + + T LIH + R A V M+ V P
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468
Query: 295 NVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLF 354
N+ YNTL+DG C ++ KA + + + P ++TYNIMI +C + +++ LF
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Query: 355 HYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
+ LK +KPD Y+ +I G+ A L +M +G
Sbjct: 529 CSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 167/339 (49%), Gaps = 8/339 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A + + M + + + ++ ++ SL + H A++L ++E KG+ P++ T + LI+
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C C+ R + A +L +++R P+ L+ G++ A +D++ +
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM----IKR 359
Query: 153 QVDRVSVTYRFLINELC---EVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSD 209
+D TY LIN C + E +L+ ++ +V YNT+I C+ K + +
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
+L+ EM + + + TY TLI+GF A F M + + P++ T + L+
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
LCK K+++A V + ++ +EP ++ YN +I+G C ++ L +++ +GV P
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAET 368
DV YN MIS C + +EA +LF M PD+ T
Sbjct: 539 DVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 116/250 (46%), Gaps = 5/250 (2%)
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
Y I+++ + DA L+ M+ R P +F +N L+ + + M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
I ++ T + LI+ C+ ++ A +++ M+K EP++ ++L++GYC +++
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 314 KARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
A L M G PD T+ +I L N EA++L M + +P+ TY +++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 374 EGWLNLPHYMHAINLL-----AEMCSNGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGD 428
G A NLL A++ +N + Y++ +D++C + DD + F + G
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 429 ADFLIASHIV 438
+ + S ++
Sbjct: 293 PNVITYSSLI 302
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 211 bits (537), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 218/419 (52%), Gaps = 38/419 (9%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
E +A+ F M RP P I +F+ +L ++ +MN + +S +++E+ GI+ ++ T
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
ILINCFC R++ A ++LGK++K Y+PD L +L+ G C I A+ D +
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 149 GFQFQ-----------------------VDRVS--------VTYRFLINELCEVGETGAA 177
G++ +DR+ VTY ++N LC+ G+T A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 178 LQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYG 235
L LL ++E +V +Y+T+I S+C+ + DA +L+ EM K + P+V TY++LI
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 236 FCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPN 295
C G+ A + M I P++ T LI A K+ K+ +A + MIK S++PN
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 296 VFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFH 355
+F Y++LI+G+C+++++ +A+ + M + P+V TYN +I+ C + +D+ M LF
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 356 YMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICND 409
M + + + TY+ LI G+ +A + +M S G+ Y LD +C +
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 149/351 (42%), Gaps = 41/351 (11%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+AV+ M+ M P F ++ L N AV+L ++ +G PD+ T ++
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N C G + A ++L K+ + + +T++ LC A+N +++ KG +
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCEDKCVSD 209
V +TY LI+ LC G A +LL + E + + ++ +I + + +
Sbjct: 286 PNV----ITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVK 341
Query: 210 AYDLYNEMLLKRISPDVFTY-----------------------------------NTLIY 234
A LY EM+ + I P++FTY NTLI
Sbjct: 342 AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 401
Query: 235 GFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEP 294
GFC ++ K + F M + + T LIH + R A V M+ V P
Sbjct: 402 GFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 461
Query: 295 NVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSN 345
N+ YN L+DG C ++ KA + + + PD++TYNIMI +C +
Sbjct: 462 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 130/286 (45%), Gaps = 41/286 (14%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A++ + M + + + ++ ++ SL + H A++L ++E KG+ P++ T + LI+
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C C+ GR + A +L +++R P+ + L+ G++ A ++++ +
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR---- 352
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDA 210
+D TY LIN C + G A Q+L + + +V YNT+I C+ K V
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412
Query: 211 YDLYNEM------------------------------LLKR-----ISPDVFTYNTLIYG 235
+L+ EM + K+ + P++ TYN L+ G
Sbjct: 413 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 472
Query: 236 FCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
C G+L KA+ F ++ ++PD+ T + +I +CK K K
Sbjct: 473 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGG 518
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 5/198 (2%)
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
IS +++TYN LI FC +L A+ M +PD+ T + L++ C ++ A
Sbjct: 109 ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 168
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
++V M++ +P+ + TLI G L N+ ++A L M RG PD+ TY +++ L
Sbjct: 169 ALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGL 228
Query: 342 CTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG----- 396
C D A++L + M+ I+ + YS +I+ H A+NL EM + G
Sbjct: 229 CKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 288
Query: 397 IAYTSKLDAICNDYNFDD 414
I Y+S + +CN + D
Sbjct: 289 ITYSSLISCLCNYGRWSD 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 118/250 (47%), Gaps = 5/250 (2%)
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
Y ++++ D + DA L+ M R P + ++ L+ + + F M+
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
+ I ++ T + LI+ C+ ++ A +++ M+K EP++ N+L++G+C N+++
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 314 KARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
A L M G PD T+ +I L N EA++L M + +PD TY ++
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 374 EGWLNLPHYMHAINLL-----AEMCSNGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGD 428
G A+NLL A++ +N + Y++ +D++C + DD + F + G
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 429 ADFLIASHIV 438
+ + S ++
Sbjct: 286 PNVITYSSLI 295
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 103/220 (46%), Gaps = 6/220 (2%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A +M+ + P + F+ ++ + V+ A L +++ + I P+I T + LI
Sbjct: 306 DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N FC L R+ A +L ++++ P+ TL+ G C + + ++ +G
Sbjct: 366 NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSD 209
+VTY LI+ + + A + +Q+ H ++ YN ++ +C++ ++
Sbjct: 426 GN----TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 481
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
A ++ + + PD++TYN +I G C G+ + +F
Sbjct: 482 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 203/433 (46%), Gaps = 38/433 (8%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A+ F M+ RP P I F +L + +MN Y +SL +Q+++ GI P + T I++
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+C C + A LGK++K ++PD T+L+ G C I AI D + GF+
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 152 FQVDRVS-------------------------------VTYRFLINELCEVGETGAALQL 180
V + VTY L+ LCE+G G A L
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 181 LRQIEEEHTD--VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA 238
LR + + + V + +I + + + +A +LYN M+ + PDVFTY +LI G C
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 239 GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFI 298
G L +A F +M+ P+ LIH CK ++V+ + M + V N
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 299 YNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
Y LI GYCL+ + A+ + + M++R PD+ TYN+++ LC + +++A+ +F YM
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFD 413
+++ + TY+I+I+G L A +L + S G I YT+ + C
Sbjct: 426 KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH 485
Query: 414 DEIEKFMRYKETG 426
+ F + KE G
Sbjct: 486 EADSLFKKMKEDG 498
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 156/341 (45%), Gaps = 6/341 (1%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A++ F +L M P + + ++ L + H AV L Q+ G P++ T L+
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
C +GR A +L ++KR +P+ T L+ G++ A ++ + Q
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM----IQ 286
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSD 209
V TY LIN LC G A Q+ +E + + +Y T+I C+ K V D
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
++ EM K + + TY LI G+C G+ A FN M PD+ T + L+
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
LC KV++A + M K ++ N+ Y +I G C + ++ A L ++ ++G+ P
Sbjct: 407 GLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKP 466
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
+V TY MIS C ++ EA SLF M P+ Y
Sbjct: 467 NVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 112/236 (47%), Gaps = 12/236 (5%)
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
Y I+++ + +DA DL+ M+ R P + + L+ + + F M+
Sbjct: 51 YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
+ I P + TC+ ++H +C + +A+ + M+K EP++ + +L++GYC N++
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE 170
Query: 314 KARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
A L + G P+V TY +I LC + ++ A+ LF+ M +P+ TY+ L+
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 374 EGWLNLPHYMHAINLLAEMCS-----NGIAYTSKLDAICNDYNFDDEIEKFMRYKE 424
G + + A LL +M N I +T+ +DA ++ K M KE
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV-------KVGKLMEAKE 279
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 207/418 (49%), Gaps = 46/418 (11%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A+ F +M+ RP P I FN +L ++V++ Y +SL +++E+ GI D+ T I+I
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
NCFC +++ A S+LGK+LK Y+PD + +L+ G C + A++ D + G++
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSD 209
+ V Y +I+ LC+ A ++IE + +V Y ++ +C SD
Sbjct: 188 PDI----VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A L ++M+ K+I+P+V TY+ L+ F G++ +A F M +I PD+ T LI+
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC----------LINQMTKARFLS 319
LC ++ +AN + M+ +V YNTLI+G+C L +M++ +S
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 320 HT-------------------------MATRGVTPDVHTYNIMISWLCTSNMMDEAMSLF 354
+T M G++PD+ TYNI++ LC + +++A+ +F
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 355 HYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAIC 407
M +++ D TY+ +I G A +L + G + YT+ + +C
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 5/245 (2%)
Query: 199 KSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
K+ D ++DA DL+++M+ R P + +N L+ + + M++ I+
Sbjct: 58 KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 117
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFL 318
D+ T + +I+ C +V A S++ M+K EP+ +L++G+C N+++ A L
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 319 SHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLN 378
M G PD+ YN +I LC + +++A F ++ K I+P+ TY+ L+ G N
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 379 LPHYMHAINLLAEMCS-----NGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLI 433
+ A LL++M N I Y++ LDA + + E F D D +
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 434 ASHIV 438
S ++
Sbjct: 298 YSSLI 302
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 7/240 (2%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
+ + A F M+ M P I +++++ L + A + + KG D+ +
Sbjct: 275 KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYN 334
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
LIN FC R+ + ++ +R +T TL++G G++ A F +
Sbjct: 335 TLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF 394
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCEDKC 206
G + TY L+ LC+ GE AL + +++ D+ + Y T+I+ MC+
Sbjct: 395 GISPDI----WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENI-KPDVSTCD 265
V +A+ L+ + LK + PD+ TY T++ G C G L + + MK E + K D + D
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD 510
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 203/415 (48%), Gaps = 43/415 (10%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+++ F +M+ RP P I F+ +L ++ +M Y + L +Q+++ GI ++ T IL+
Sbjct: 64 DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
NCFC +++ A S LGK++K ++P +L+ G C + A+ D + G++
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAY 211
+V +YNTII +C+ K V +A
Sbjct: 184 -------------------------------------PNVVIYNTIIDGLCKSKQVDNAL 206
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
DL N M I PDV TYN+LI G C+ G+ A + M I PDV T + LI A
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 272 CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV 331
KE +V +A MI+ S++P++ Y+ LI G C+ +++ +A + M ++G PDV
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 332 HTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW-----LNLPHYMHAI 386
TY+I+I+ C S ++ M LF M + + + TY+ILI+G+ LN+ +
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 387 NLLAEMCSNGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIVLRN 441
+ + N I Y L +C++ + + ++ G DAD ++ +I++R
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDAD-IVTYNIIIRG 440
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 155/336 (46%), Gaps = 6/336 (1%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A+ F M+ M P + +N I+ L + A+ L ++E GI PD+ T LI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ C GR + A ++ + KR PD L+ G + A F++++ +
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR--- 285
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSD 209
+D VTY LI LC A ++ + + DV Y+ +I C+ K V
Sbjct: 286 -SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
L+ EM + + + TY LI G+C G+L A F M + P++ T + L+H
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
LC K+++A ++A M K ++ ++ YN +I G C ++ A + ++ +G+ P
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPD 365
D+ TY M+ L + EA +LF M I P+
Sbjct: 465 DIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 94/186 (50%)
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+ D+ DL+ M+ R P + ++ L+ + + + M+M I ++ TC+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
L++ C+ ++ A S + MIK EP++ + +L++G+C +++ A ++ M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
P+V YN +I LC S +D A+ L + M+ I PD TY+ LI G + + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 387 NLLAEM 392
+++ M
Sbjct: 242 RMVSCM 247
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 208/459 (45%), Gaps = 84/459 (18%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A + F M+ +P P I F +L + + Y T + SQ++EL GI+ D+ + TILI
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+CFC R+++A SVLGK++K Y+P +L+ G CL I A + + G++
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSD 209
V V Y LI+ LC+ GE AL+LL ++E++ DV YNT++ +C SD
Sbjct: 174 PNV----VVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 210 -----------------------------------AYDLYNEMLLKRISPDVFTYNTLIY 234
A +LY EM+ + P+ TYN++I
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 235 GFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEP 294
G C G+L A F++M + P+V T + LI CK R V + + M
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 295 NVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHT--------------------- 333
++F YNTLI GYC + ++ A + M +R VTPD+ T
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 334 --------------YNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNL 379
YNIMI LC ++ +++A LF + ++ +KPDA TY+I+I G
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 380 PHYMHAINLLAEMCSNGIAYTSKLDAICNDYNFDDEIEK 418
A L+ M GI IC DD +E+
Sbjct: 470 GPRREADELIRRMKEEGI--------ICQMNAEDDHLEE 500
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 40/256 (15%)
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
+M L IS D++++ LI+ FC +L A+ M +P + T L+H C
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY 334
++ A S+V M+K+ EPNV +YNTLIDG C ++ A L + M +G+ DV TY
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 335 NIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM-- 392
N +++ LC S +A + M + I PD T++ LI+ ++ + A L EM
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 393 -----------------CSNG---------------------IAYTSKLDAICNDYNFDD 414
C +G + Y + + C D+
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 415 EIEKFMRYKETGGDAD 430
++ F R G +AD
Sbjct: 335 GMKLFQRMSCEGFNAD 350
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 5/235 (2%)
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
DA+ L+ EM+ + P + + L+ + + F M++ I D+ + LI
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
H C+ ++ A SV+ M+K EP++ + +L+ G+CL+N++ A L M G
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINL 388
P+V YN +I LC + ++ A+ L + M+ K + D TY+ L+ G + A +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 389 LAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
L +M I +T+ +D N D+ E + ++ D + + + I+
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 200/414 (48%), Gaps = 44/414 (10%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+ F +M+ RP P I F +L + +M + ++L L++ G++ D+ T +L+N
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMN 115
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
CFC + A S LGK++K ++PD T+L+ G CL + A++
Sbjct: 116 CFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMS------------ 163
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYD 212
++N++ E+G DV MY TII S+C++ V+ A
Sbjct: 164 -----------MVNQMVEMGI--------------KPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 213 LYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALC 272
L+++M I PDV Y +L+ G C G+ R A M IKPDV T + LI A
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 273 KERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVH 332
KE K A + MI+ S+ PN+F Y +LI+G+C+ + +AR + + M T+G PDV
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 333 TYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
Y +I+ C +D+AM +F+ M K + + TY+ LI+G+ + A + + M
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 393 CSNGI-----AYTSKLDAICNDYNFDDEIEKF--MRYKETGGDADFLIASHIVL 439
S G+ Y L +C + + F M+ +E G A + +++L
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 178/373 (47%), Gaps = 13/373 (3%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+S + M+ M P + + I+ SL + H A+SL Q+E GI PD+ T L+N
Sbjct: 161 AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C+ GR A S+L + KR +PD L+ G+ A ++++ +
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM----IRM 276
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDA 210
+ TY LIN C G A Q+ +E + DV Y ++I C+ K V DA
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
++ EM K ++ + TY TLI GF G+ A F+ M + P++ T + L+H
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 271 LCKERKVKQANSVVAAMIKA---SVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGV 327
LC KVK+A + M K V PN++ YN L+ G C ++ KA + M R +
Sbjct: 397 LCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREM 456
Query: 328 TPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWL--NLPHYMHA 385
+ TY I+I +C + + A++LF + K +KP+ TY+ +I G L H H
Sbjct: 457 DIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHV 516
Query: 386 INLLAEMCSNGIA 398
L +M +G++
Sbjct: 517 --LFRKMKEDGVS 527
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 142/302 (47%), Gaps = 9/302 (2%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A S M + P + FN ++ + V+ + A L ++ IAP+I T T LI
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N FC G ++ A + + + PD A T+L+ G C ++ A+ ++ KG
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSD 209
++TY LI +VG+ A ++ + +++ YN ++ +C + V
Sbjct: 350 GN----TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 210 AYDLYNEMLLKR---ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
A ++ +M + ++P+++TYN L++G C G+L KA+ F M+ + + T
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTI 465
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
+I +CK KVK A ++ ++ V+PNV Y T+I G +A L M G
Sbjct: 466 IIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Query: 327 VT 328
V+
Sbjct: 526 VS 527
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 210/447 (46%), Gaps = 43/447 (9%)
Query: 19 HSHSPRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELK 78
+ S + S + F M+ RP P I F+ +L + + +Y +SL +E+
Sbjct: 39 RTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVC 98
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
GI D+ + I+INC C R A SV+GK++K Y+PD +++L+ G C + A
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNT 196
I+ ++ GF+ V V Y +I+ C++G A++L ++E + D YN+
Sbjct: 159 IDLVSKMEEMGFRPDV----VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 214
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN 256
++ +C SDA L +M+++ I P+V T+ +I F G+ +A+ + M
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKAR 316
+ PDV T + LI+ LC +V +A ++ M+ P+V YNTLI+G+C ++ +
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334
Query: 317 FLSHTMATRGVT--------------------------------PDVHTYNIMISWLCTS 344
L MA RG+ P++ TY+I++ LC +
Sbjct: 335 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMN 394
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAY 399
+++A+ LF M +I+ D TY+I+I G + + A +L + G ++Y
Sbjct: 395 WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 454
Query: 400 TSKLDAICNDYNFDDEIEKFMRYKETG 426
T+ + C +D + + +E G
Sbjct: 455 TTMISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 156/340 (45%), Gaps = 9/340 (2%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
+ +A+ M M P + +N I+ ++ AV L ++E G+ D T
Sbjct: 152 GNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVT 211
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
L+ C GR + A ++ ++ R P+ T ++ G+ A+ ++++
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCED 204
+ VD TY LIN LC G A Q+L + + DV YNT+I C+
Sbjct: 272 RRC----VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Query: 205 KCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTC 264
K V + L+ EM + + D TYNT+I G+ G+ A F+ M + +P++ T
Sbjct: 328 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTY 384
Query: 265 DPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMAT 324
L++ LC +V++A + M K+ +E ++ YN +I G C I + A L +++
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444
Query: 325 RGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKP 364
+G+ PDV +Y MIS C D++ L+ M + P
Sbjct: 445 KGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 5/254 (1%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
D+ YN +I +C A + +M+ PDV T ++LI GFC G ++ A+
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
+ M+ +PDV + +I CK V A + M + V + YN+L+ G C
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
+ + A L M R + P+V T+ +I EAM L+ M + + PD TY
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYKE 424
+ LI G A +L M + G + Y + ++ C D+ + F +
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 425 TGGDADFLIASHIV 438
G D + + I+
Sbjct: 343 RGLVGDTITYNTII 356
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 111/237 (46%), Gaps = 5/237 (2%)
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+ + DL+ +M+ R P + ++ ++ + F+ M++ I D+ + +
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
+I+ LC+ + A SVV M+K EP+V ++LI+G+C N++ A L M G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
PDV YN +I C ++++A+ LF M+ ++ DA TY+ L+ G + A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 387 NLLAEM-----CSNGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
L+ +M N I +T+ +D + F + ++ + D D + ++
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 208/434 (47%), Gaps = 40/434 (9%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A S F ML RP P I F +L + +MN + + L ++E GI+ D+ + TILI
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF- 150
+CFC R++ A ++LGK++K ++P L +L+ G C + A++ D + GF
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 151 ------------------------------QFQVDRVSVTYRFLINELCEVGETGAALQL 180
+ + +VTY LI+ L G A +L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 181 LRQIEEEHTD--VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA 238
LR + + D V + +I + ++ + +A +LY EM+ + + P+VFTYN+LI GFC
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 239 GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFI 298
G L A F++M + PDV T + LI CK ++V+ + M + + F
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 299 YNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
YNTLI GYC ++ A+ + + M GV+PD+ TYNI++ LC + +++A+ + +
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFD 413
++ D TY+I+I+G A L + G IAY + + +C
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK-GLQ 480
Query: 414 DEIEKF-MRYKETG 426
E +K R KE G
Sbjct: 481 READKLCRRMKEDG 494
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 155/339 (45%), Gaps = 6/339 (1%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
AVS +M P + +N ++ L + A+ + +E KGI D T LI+
Sbjct: 168 AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 227
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
+ GR A +L ++KR P+ T L+ G + A N + ++ +
Sbjct: 228 GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 287
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDA 210
V TY LIN C G G A + + + DV YNT+I C+ K V D
Sbjct: 288 NV----FTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
L+ EM + + D FTYNTLI+G+C G+L A FN M + PD+ T + L+
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 403
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
LC K+++A +V + K+ ++ ++ YN +I G C +++ +A L ++ +GV PD
Sbjct: 404 LCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPD 463
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
Y MIS LC + EA L M P Y
Sbjct: 464 AIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 140/306 (45%), Gaps = 6/306 (1%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
NA+ F+ M +N ++ L + A L + + + I P++ T LI
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ F G + A ++ ++++R+ P+ +L+ G C++G + A D + +KG
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSD 209
V VTY LI C+ ++L ++ + D YNT+I C+ ++
Sbjct: 322 PDV----VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A ++N M+ +SPD+ TYN L+ C G++ KA+ ++ + D+ T + +I
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 437
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
LC+ K+K+A + ++ + V+P+ Y T+I G C +A L M G P
Sbjct: 438 GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Query: 330 DVHTYN 335
Y+
Sbjct: 498 SERIYD 503
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 190/396 (47%), Gaps = 23/396 (5%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A+ F M+ RP N ++G VRMN A+SL +++E++ I +I + ILI
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
CFC +++++ S GK+ K +QPD TL+ GLCL I A+ F
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALAL--------FG 200
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAY 211
+ V+ + L +++ E+G T + +NT+I +C + V +A
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVIT--------------FNTLINGLCLEGRVLEAA 246
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
L N+M+ K + DV TY T++ G C G + A+ + M+ +IKPDV +I L
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Query: 272 CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV 331
CK+ A + + M++ + PNVF YN +IDG+C + + A+ L M R + PDV
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366
Query: 332 HTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE 391
T+N +IS + EA L M + I PD TY+ +I G+ + A ++
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 426
Query: 392 MCS-NGIAYTSKLDAICNDYNFDDEIEKFMRYKETG 426
M S + + + + +D C D+ ++ G
Sbjct: 427 MASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 189/407 (46%), Gaps = 15/407 (3%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
+ AV+ F M+ + P + FN ++ L A +L ++ KG+ D+ T +
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
+N C +G A ++L K+ + +PD + ++ LC +G A ++ KG
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQ-IEEE-HTDVQMYNTIIKSMCEDKCVS 208
V TY +I+ C G A +LLR IE E + DV +N +I + ++ +
Sbjct: 328 APNV----FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
+A L +EML + I PD TYN++IYGFC + A F++M PDV T + +I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTII 439
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
C+ ++V + ++ + + + N YNTLI G+C ++ + A+ L M + GV
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINL 388
PD T NI++ C + ++EA+ LF + + I D Y+I+I G A +L
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Query: 389 LAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKFMRYKETGGDAD 430
+ +G+ Y + C D F + K+ G + D
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPD 606
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 180/377 (47%), Gaps = 9/377 (2%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A++ M P + ++ I+ L + H+ A L ++ KGIAP++ T +I
Sbjct: 279 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ FC GR + A +L +++R PD L+ G++ A D++ +
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC-- 396
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAY 211
+ +VTY +I C+ A + + DV +NTII C K V +
Sbjct: 397 --IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS--PDVVTFNTIIDVYCRAKRVDEGM 452
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
L E+ + + + TYNTLI+GFC L A F M + PD TC+ L++
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 272 CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV 331
C+ K+++A + + + ++ + YN +I G C +++ +A L ++ GV PDV
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 332 HTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE 391
TYN+MIS C + + +A LFH M +PD TY+ LI G L +I L++E
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 392 MCSNGI---AYTSKLDA 405
M SNG A+T K+ A
Sbjct: 633 MRSNGFSGDAFTIKMVA 649
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 179/387 (46%), Gaps = 60/387 (15%)
Query: 28 HEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNH---------------YPTAVSLS 72
H+ ++S+F + + P + FN +L L + + AV+L
Sbjct: 155 HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF 214
Query: 73 QQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLN 132
Q+ G+ P + T LIN C GR+ A +++ K++ + D T++ G+C
Sbjct: 215 DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274
Query: 133 GEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--D 190
G+ +SA+N LL ++EE H D
Sbjct: 275 GDTKSALN---------------------------------------LLSKMEETHIKPD 295
Query: 191 VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFN 250
V +Y+ II +C+D SDA L++EML K I+P+VFTYN +I GFC+ G+ A
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 251 VMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLIN 310
M I PDV T + LI A KE K+ +A + M+ + P+ YN++I G+C N
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 311 QMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
+ A+ + MA +PDV T+N +I C + +DE M L + + + + TY+
Sbjct: 416 RFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 371 ILIEGWLNLPHYMHAINLLAEMCSNGI 397
LI G+ + + A +L EM S+G+
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGV 498
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 156/340 (45%), Gaps = 10/340 (2%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F ML AP + +N ++ + A L + + + I PD+ T LI+
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
G++ A + ++L R PDT +++ G C + N DD K F
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH-------NRFDDAKHM-FDLMASP 430
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLY 214
VT+ +I+ C +QLLR+I + YNT+I CE ++ A DL+
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
EM+ + PD T N L+YGFC +L +A+ F V++M I D + +IH +CK
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY 334
KV +A + ++ VEP+V YN +I G+C + ++ A L H M G PD TY
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 335 NIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIE 374
N +I + +D+++ L M DA T ++ +
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 20/242 (8%)
Query: 205 KCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTC 264
K + DA D ++ M+ R N +I F + A+ + M++ I ++ +
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 265 DPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA--------- 315
+ LI C K+ + S + K +P+V +NTL+ G CL +++++A
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 316 -RFLS-----HTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
FL M G+TP V T+N +I+ LC + EA +L + M K + D TY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLDAICNDYNFDDEIEKFMRYKE 424
++ G + A+NLL++M I Y++ +D +C D + D F E
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 425 TG 426
G
Sbjct: 325 KG 326
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 189/387 (48%), Gaps = 23/387 (5%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A+ F M+ RP N ++G VRMN A+SL +++E++ I +I + ILI
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
CFC +++++ S GK+ K +QPD TL+ GLCL I A+ F
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALAL--------FG 200
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAY 211
+ V+ + L +++ E+G T + +NT+I +C + V +A
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVIT--------------FNTLINGLCLEGRVLEAA 246
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
L N+M+ K + DV TY T++ G C G + A+ + M+ +IKPDV +I L
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Query: 272 CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV 331
CK+ A + + M++ + PNVF YN +IDG+C + + A+ L M R + PDV
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366
Query: 332 HTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE 391
T+N +IS + EA L M + I PD TY+ +I G+ + A ++
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 426
Query: 392 MCS-NGIAYTSKLDAICNDYNFDDEIE 417
M S + + + + +D C D+ ++
Sbjct: 427 MASPDVVTFNTIIDVYCRAKRVDEGMQ 453
Score = 174 bits (442), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 185/372 (49%), Gaps = 30/372 (8%)
Query: 28 HEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATL 87
H+ ++S+F + + P + FN +L L + +S+ L L G + L
Sbjct: 155 HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR------ISEALALFGYMVETGFL 208
Query: 88 TILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKA 147
A ++ ++++ P TL+ GLCL G + A + +
Sbjct: 209 E--------------AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG 254
Query: 148 KGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDK 205
KG V VTY ++N +C++G+T +AL LL ++EE H DV +Y+ II +C+D
Sbjct: 255 KGLHIDV----VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310
Query: 206 CVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCD 265
SDA L++EML K I+P+VFTYN +I GFC+ G+ A M I PDV T +
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 266 PLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATR 325
LI A KE K+ +A + M+ + P+ YN++I G+C N+ A+ + MA
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA-- 428
Query: 326 GVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHA 385
+PDV T+N +I C + +DE M L + + + + TY+ LI G+ + + A
Sbjct: 429 --SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 386 INLLAEMCSNGI 397
+L EM S+G+
Sbjct: 487 QDLFQEMISHGV 498
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 189/407 (46%), Gaps = 15/407 (3%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
+ AV+ F M+ + P + FN ++ L A +L ++ KG+ D+ T +
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
+N C +G A ++L K+ + +PD + ++ LC +G A ++ KG
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQ-IEEE-HTDVQMYNTIIKSMCEDKCVS 208
V TY +I+ C G A +LLR IE E + DV +N +I + ++ +
Sbjct: 328 APNV----FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
+A L +EML + I PD TYN++IYGFC + A F++M PDV T + +I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTII 439
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
C+ ++V + ++ + + + N YNTLI G+C ++ + A+ L M + GV
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINL 388
PD T NI++ C + ++EA+ LF + + I D Y+I+I G A +L
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Query: 389 LAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKFMRYKETGGDAD 430
+ +G+ Y + C D F + K+ G + D
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPD 606
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 192/400 (48%), Gaps = 12/400 (3%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A++ M P + ++ I+ L + H+ A L ++ KGIAP++ T +I
Sbjct: 279 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ FC GR + A +L +++R PD L+ G++ A D++ +
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC-- 396
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAY 211
+ +VTY +I C+ A + + DV +NTII C K V +
Sbjct: 397 --IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS--PDVVTFNTIIDVYCRAKRVDEGM 452
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
L E+ + + + TYNTLI+GFC L A F M + PD TC+ L++
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 272 CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV 331
C+ K+++A + + + ++ + YN +I G C +++ +A L ++ GV PDV
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 332 HTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE 391
TYN+MIS C + + +A LFH M +PD TY+ LI G L +I L++E
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 392 MCSNGI---AYTSKL--DAICNDYNFDDEIEKFMRYKETG 426
M SNG A+T K+ + IC + ++ IE ++R K G
Sbjct: 633 MRSNGFSGDAFTIKMAEEIICRVSD-EEIIENYLRPKING 671
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 20/242 (8%)
Query: 205 KCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTC 264
K + DA D ++ M+ R N +I F + A+ + M++ I ++ +
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 265 DPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA--------- 315
+ LI C K+ + S + K +P+V +NTL+ G CL +++++A
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 316 -RFLS-----HTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
FL M G+TP V T+N +I+ LC + EA +L + M K + D TY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLDAICNDYNFDDEIEKFMRYKE 424
++ G + A+NLL++M I Y++ +D +C D + D F E
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 425 TG 426
G
Sbjct: 325 KG 326
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 192/404 (47%), Gaps = 41/404 (10%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A++ F +M P P I F+ +L ++ ++N Y +SL + LE+ GI+ D+ + T LI
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+CFC R++ A S LGK++K ++P +L+ G C A++ D + G++
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSM-------C 202
V V Y +I+ LCE G+ AL +L+ +++ DV YN++I +
Sbjct: 182 PNV----VIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV 237
Query: 203 EDKCVSD----------------------------AYDLYNEMLLKRISPDVFTYNTLIY 234
+ +SD A YNEM+ + ++P++ TYN+LI
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297
Query: 235 GFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEP 294
G C G L +A NV+ + P+ T + LI+ CK ++V ++ M + V+
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDG 357
Query: 295 NVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLF 354
+ F YNTL GYC + + A + M + GV PD++T+NI++ LC + +A+
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRL 417
Query: 355 HYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA 398
+ TY+I+I+G A L + G++
Sbjct: 418 EDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVS 461
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 150/331 (45%), Gaps = 6/331 (1%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+S ++ + P + +N I+ SL TA+ + + ++ GI PD+ T LI
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
H G + +L +++ PD + L+ G++ A ++++ Q
Sbjct: 228 RLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEM----IQR 283
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDA 210
V+ VTY LIN LC G A ++L + + + YNT+I C+ K V D
Sbjct: 284 SVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDG 343
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
+ M + D FTYNTL G+C G+ A M + PD+ T + L+
Sbjct: 344 MKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDG 403
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
LC K+ +A + + K+ + YN +I G C +++ A +L ++A +GV+PD
Sbjct: 404 LCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPD 463
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKD 361
V TY M+ L + EA L+ M +D
Sbjct: 464 VITYITMMIGLRRKRLWREAHELYRKMQKED 494
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 104/236 (44%)
Query: 163 FLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRI 222
FL L E G AL L + Y ++S +DA L+ +M
Sbjct: 16 FLHRHLLEKGNLVTALSLRICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHP 75
Query: 223 SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS 282
P + ++ L+ + + F ++M I D+ + LI C+ ++ A S
Sbjct: 76 LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALS 135
Query: 283 VVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC 342
+ M+K EP++ + +L++G+C +N+ +A L + G P+V YN +I LC
Sbjct: 136 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195
Query: 343 TSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA 398
++ A+ + +M I+PD TY+ LI + + + +L++M GI+
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGIS 251
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 163/306 (53%), Gaps = 15/306 (4%)
Query: 110 ILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELC 169
+++ +PD TTLM GLC G + A+ D + +G Q Y +IN LC
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ--------PYGTIINGLC 52
Query: 170 EVGETGAALQLLRQIEEEHTD--VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVF 227
++G+T +AL LL ++EE H V +YN II +C+D A +L+ EM K I PDV
Sbjct: 53 KMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVI 112
Query: 228 TYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
TY+ +I FC G+ A M I PDV T LI+AL KE KV +A + M
Sbjct: 113 TYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDM 172
Query: 288 IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMM 347
++ + P YN++IDG+C +++ A+ + +MA++ +PDV T++ +I+ C + +
Sbjct: 173 LRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRV 232
Query: 348 DEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSK 402
D M +F M + I + TY+ LI G+ + A +LL M S+G+A + S
Sbjct: 233 DNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSM 292
Query: 403 LDAICN 408
L ++C+
Sbjct: 293 LASLCS 298
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 146/309 (47%), Gaps = 37/309 (11%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G PD+ T T L+N C GR+ A +++ ++++ +QP T++ GLC G+ SA
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 139 INFHDDVKAKGFQFQV-------DRVS------------------------VTYRFLINE 167
+N ++ + V DR+ +TY +I+
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 168 LCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPD 225
C G A QLLR + E DV ++ +I ++ ++ VS+A ++Y +ML + I P
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 226 VFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVA 285
TYN++I GFC +L A + M ++ PDV T LI+ CK ++V +
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 286 AMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSN 345
M + + N Y TLI G+C + + A+ L + M + GV P+ T+ M++ LC+
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300
Query: 346 MMDEAMSLF 354
+ +A ++
Sbjct: 301 ELRKAFAIL 309
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 123/242 (50%), Gaps = 6/242 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+N I+ L + H+ A +L ++ KGI PD+ T + +I+ FC GR A +L ++
Sbjct: 79 YNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMI 138
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+R PD + L+ L G++ A + D+ +G + ++TY +I+ C+
Sbjct: 139 ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG----IFPTTITYNSMIDGFCKQ 194
Query: 172 GETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
A ++L + + DV ++T+I C+ K V + +++ EM + I + TY
Sbjct: 195 DRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 254
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
TLI+GFC G L A NVM + P+ T ++ +LC ++++++A +++ + K
Sbjct: 255 TTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Query: 290 AS 291
+
Sbjct: 315 SE 316
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNM 346
M++ P+V + TL++G C ++ +A L M G P Y +I+ LC
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 347 MDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTS 401
+ A++L M+ IK Y+ +I+ H++HA NL EM G I Y+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 402 KLDAICNDYNFDDEIEKFMR 421
+D+ C + D E+ +R
Sbjct: 117 MIDSFCRSGRWTDA-EQLLR 135
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 180/376 (47%), Gaps = 13/376 (3%)
Query: 48 PITQF-NNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P T F N +L LV N ++ + GI PD++T +LI C ++ A +
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
L + PD TT+M+G G++ A+ ++ + +F +V+ +++
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR----IREQMVEFGCSWSNVSVNVIVH 267
Query: 167 ELCEVGETGAALQLLRQIEEEH---TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
C+ G AL ++++ + D +NT++ +C+ V A ++ + ML +
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
PDV+TYN++I G C G++++AV + M + P+ T + LI LCKE +V++A +
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
+ + P+V +N+LI G CL A L M ++G PD TYN++I LC+
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM-----CSNGIA 398
+DEA+++ M+L TY+ LI+G+ A + EM N +
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507
Query: 399 YTSKLDAICNDYNFDD 414
Y + +D +C +D
Sbjct: 508 YNTLIDGLCKSRRVED 523
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 194/389 (49%), Gaps = 12/389 (3%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
+H+ A+ +M S P F ++ + A+ + +Q+ G + +
Sbjct: 202 AHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVS 261
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKR-AYQPDTTALTTLMKGLCLNGEIRSAINFHDDV 145
+ ++++ FC GR+ A + + ++ + + PD TL+ GLC G ++ AI D +
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321
Query: 146 KAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQI--EEEHTDVQMYNTIIKSMCE 203
+G+ V TY +I+ LC++GE A+++L Q+ + + YNT+I ++C+
Sbjct: 322 LQEGYDPDV----YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 204 DKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVST 263
+ V +A +L + K I PDV T+N+LI G C R A+ F M+ + +PD T
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 264 CDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMA 323
+ LI +LC + K+ +A +++ M + +V YNTLIDG+C N+ +A + M
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 324 TRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYM 383
GV+ + TYN +I LC S +++A L M ++ KPD TY+ L+ +
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 384 HAINLLAEMCSNG-----IAYTSKLDAIC 407
A +++ M SNG + Y + + +C
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 171/370 (46%), Gaps = 12/370 (3%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P FN ++ L + H A+ + + +G PD+ T +I+ C LG + A V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
L +++ R P+T TL+ LC ++ A + +KG V T+ LI
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV----CTFNSLIQ 408
Query: 167 ELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
LC A++L ++ + D YN +I S+C + +A ++ +M L +
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
V TYNTLI GFC + R+A F+ M++ + + T + LI LCK R+V+ A ++
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
MI +P+ + YN+L+ +C + KA + M + G PD+ TY +IS LC +
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCS------NGIA 398
++ A L + +K I Y+ +I+G AINL EM + ++
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVS 648
Query: 399 YTSKLDAICN 408
Y +CN
Sbjct: 649 YRIVFRGLCN 658
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 168/352 (47%), Gaps = 5/352 (1%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P ++ FN ++ +L R + A+ + + + G+ PD T T ++ + G ++ A +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
++++ ++ ++ G C G + A+NF ++ + F T+ L+N
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP---DQYTFNTLVN 303
Query: 167 ELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
LC+ G A++++ + +E DV YN++I +C+ V +A ++ ++M+ + SP
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
+ TYNTLI C Q+ +A V+ + I PDV T + LI LC R + A +
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
M EP+ F YN LID C ++ +A + M G V TYN +I C +
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
N EA +F M++ + ++ TY+ LI+G A L+ +M G
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 123/313 (39%), Gaps = 76/313 (24%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
D YN ++ + + + + +M + I PDV T+N LI C QLR A+
Sbjct: 153 DTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILML 212
Query: 250 NVMKMENIKPDVST-----------------------------------CDPLIHALCKE 274
M + PD T + ++H CKE
Sbjct: 213 EDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKE 272
Query: 275 RKVKQA--------------------NSVVAAMIKA----------------SVEPNVFI 298
+V+ A N++V + KA +P+V+
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 299 YNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
YN++I G C + ++ +A + M TR +P+ TYN +IS LC N ++EA L +
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFD 413
K I PD T++ LI+G ++ A+ L EM S G Y +D++C+ D
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 414 DEIEKFMRYKETG 426
+ + + + +G
Sbjct: 453 EALNMLKQMELSG 465
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 116/247 (46%), Gaps = 12/247 (4%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
A + +N ++ + N A + ++E+ G++ + T LI+ C R+ A
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
++ +++ +PD +L+ C G+I+ A + + + G + + VTY LI
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI----VTYGTLI 582
Query: 166 NELCEVGETGAALQLLRQIEEEHTDV--QMYNTIIKSMCEDKCVSDAYDLYNEMLLK-RI 222
+ LC+ G A +LLR I+ + ++ YN +I+ + + ++A +L+ EML +
Sbjct: 583 SGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEA 642
Query: 223 SPDVFTYNTLIYGFC-AGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALC----KERKV 277
PD +Y + G C GG +R+AV F + + P+ S+ L L +E V
Sbjct: 643 PPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLV 702
Query: 278 KQANSVV 284
K N V+
Sbjct: 703 KLVNMVM 709
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 164/335 (48%), Gaps = 12/335 (3%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + +N + L + AV + L +G PD+ T LI C + A
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY 308
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF---QFQVDRVSVTYRF 163
LGK++ +PD+ TL+ G C G ++ A D GF QF TYR
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF-------TYRS 361
Query: 164 LINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKR 221
LI+ LC GET AL L + + +V +YNT+IK + + +A L NEM K
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
+ P+V T+N L+ G C G + A G VM + PD+ T + LIH + K++ A
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
++ M+ V+P+V+ YN+L++G C ++ TM +G P++ T+NI++ L
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 342 CTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
C +DEA+ L M K + PDA T+ LI+G+
Sbjct: 542 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 193/436 (44%), Gaps = 46/436 (10%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
AV+ F M P + +N I+ LV ++ A + ++ +GI PD+ + TI +
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 93 CFCHLGRMNYAFSVL-----------------------------------GKILKRAYQP 117
FC R + A +L GK+L
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 118 DTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAA 177
+ L++ LC G+++ D V +G + TY I LC+ GE A
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNL----FTYNLFIQGLCQRGELDGA 270
Query: 178 LQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYG 235
++++ + E+ DV YN +I +C++ +A +M+ + + PD +TYNTLI G
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 236 FCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPN 295
+C GG ++ A PD T LI LC E + +A ++ + ++PN
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 296 VFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFH 355
V +YNTLI G + +A L++ M+ +G+ P+V T+NI+++ LC + +A L
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 356 YMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDY 410
M K PD T++ILI G+ +A+ +L M NG+ Y S L+ +C
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510
Query: 411 NFDDEIEKFMRYKETG 426
F+D +E + E G
Sbjct: 511 KFEDVMETYKTMVEKG 526
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 187/400 (46%), Gaps = 19/400 (4%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F ML+ + ++ FN +L L + L ++ +G+ P++ T + I C
Sbjct: 204 FGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQ 263
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
G ++ A ++G ++++ +PD L+ GLC N + + A + + +G +
Sbjct: 264 RGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD--- 320
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEEHT------DVQMYNTIIKSMCEDKCVSDA 210
S TY LI C+ G +QL +I + D Y ++I +C + + A
Sbjct: 321 -SYTYNTLIAGYCK----GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
L+NE L K I P+V YNTLI G G + +A N M + + P+V T + L++
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
LCK V A+ +V MI P++F +N LI GY +M A + M GV PD
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD 495
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
V+TYN +++ LC ++ ++ M + M K P+ T++IL+E A+ LL
Sbjct: 496 VYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLE 555
Query: 391 EMCS-----NGIAYTSKLDAICNDYNFDDEIEKFMRYKET 425
EM + + + + + +D C + + D F + +E
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 176/406 (43%), Gaps = 42/406 (10%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
E AV ++ P P + +NN++ L + + + A ++ +G+ PD T
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
LI +C G + A ++G + + PD +L+ GLC GE A+ ++ K
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKC 206
G + V + Y LI L G A QL ++ E+ +VQ +N ++ +C+ C
Sbjct: 386 GIKPNV----ILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
VSDA L M+ K PD+FT+N LI+G+ ++ A+ +VM + PDV T +
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
L++ LCK K + M++ PN+F +N L++ C ++ +A L M +
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDL--------------------------- 359
V PD T+ +I C + +D A +LF M+
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMA 621
Query: 360 ---------KDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
+ + PD TY ++++G+ + L EM NG
Sbjct: 622 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG 667
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 153/393 (38%), Gaps = 77/393 (19%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P +N ++ + A + G PD T LI+ CH G N A ++
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
+ L + +P+ TL+KGL G I A +++ KG +V T+ L+N
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ----TFNILVN 434
Query: 167 ELCEVGETGAALQLLR-----------------------QIEEEHT-------------- 189
LC++G A L++ Q++ E+
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
DV YN+++ +C+ D + Y M+ K +P++FT+N L+ C +L +A+G
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 250 NVMKMENIKPDVSTCDPLIHALCKE----------RKVKQANSVVAA------------- 286
MK +++ PD T LI CK RK+++A V ++
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614
Query: 287 -------------MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHT 333
M+ + P+ + Y ++DG+C + M G P + T
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674
Query: 334 YNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDA 366
+I+ LC + + EA + H M K + P+A
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 115/276 (41%), Gaps = 44/276 (15%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
NA+ ML P + +N++L L + + + + + + KG AP++ T IL+
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
C +++ A +L ++ ++ PD TL+ G C NG++
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD--------------- 583
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH---TDVQMYNTIIKSMCEDKCVS 208
A L R++EE + + YN II + E V+
Sbjct: 584 ------------------------GAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVT 619
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
A L+ EM+ + + PD +TY ++ GFC G + F M P ++T +I
Sbjct: 620 MAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVI 679
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLID 304
+ LC E +V +A ++ M++ + P NT+ D
Sbjct: 680 NCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTICD 713
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 121/293 (41%), Gaps = 12/293 (4%)
Query: 130 CLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE-- 187
C +++ F+ K GF+ + TYR +I +L G+ A ++L + E
Sbjct: 16 CQKDPMKALEMFNSMRKEVGFKHTLS----TYRSVIEKLGYYGKFEAMEEVLVDMRENVG 71
Query: 188 -HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAV 246
H +Y +K+ V +A +++ M P VF+YN ++ G +A
Sbjct: 72 NHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAH 131
Query: 247 GFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGY 306
+ M+ I PDV + + + CK + A ++ M E NV Y T++ G+
Sbjct: 132 KVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF 191
Query: 307 CLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDA 366
N + L M GV+ + T+N ++ LC + E L + + + P+
Sbjct: 192 YEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNL 251
Query: 367 ETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDD 414
TY++ I+G A+ ++ + G I Y + + +C + F +
Sbjct: 252 FTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 180/381 (47%), Gaps = 14/381 (3%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
+ ML + P I +N ++ ++ + A ++ G+ PD T T LI +C
Sbjct: 206 YMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQ 265
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ-FQVD 155
++ AF V ++ + + + A T L+ GLC+ I A++ VK K + F
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLF--VKMKDDECFPTV 323
Query: 156 RVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDL 213
R TY LI LC AL L++++EE ++ Y +I S+C A +L
Sbjct: 324 R---TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 214 YNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCK 273
+ML K + P+V TYN LI G+C G + AV +M+ + P+ T + LI CK
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 274 ERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHT 333
V +A V+ M++ V P+V YN+LIDG C A L M RG+ PD T
Sbjct: 441 SN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 334 YNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMC 393
Y MI LC S ++EA LF ++ K + P+ Y+ LI+G+ A +L +M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 394 S-----NGIAYTSKLDAICND 409
S N + + + + +C D
Sbjct: 560 SKNCLPNSLTFNALIHGLCAD 580
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 178/409 (43%), Gaps = 43/409 (10%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + + ++ SL A++L +++E GI P+I T T+LI+ C + A +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
LG++L++ P+ L+ G C G I A++ + ++++
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS--------------- 425
Query: 167 ELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
+ + YN +IK C+ V A + N+ML +++ PDV
Sbjct: 426 ----------------------PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDV 462
Query: 227 FTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAA 286
TYN+LI G C G A ++M + PD T +I +LCK ++V++A + +
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNM 346
+ + V PNV +Y LIDGYC ++ +A + M ++ P+ T+N +I LC
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 347 MDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTS 401
+ EA L M ++P T +ILI L + HA + +M S+G YT+
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 402 KLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIVLRNPSFKATGFG 450
+ C + D + + +E G D S ++ T F
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 146/295 (49%), Gaps = 11/295 (3%)
Query: 130 CLNGEIRSAINFH--DDVKAKGFQFQVDRVS---VTYRFLINELCEVGETGAALQLLRQI 184
C N + S F D++K + D+V TY ++N C++G A Q + +I
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 185 EEEHTDVQM--YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQL 242
E D Y ++I C+ K + A+ ++NEM LK + Y LI+G C ++
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 243 RKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTL 302
+A+ F MK + P V T LI +LC + +A ++V M + ++PN+ Y L
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 303 IDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDI 362
ID C + KAR L M +G+ P+V TYN +I+ C M+++A+ + M+ + +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 363 KPDAETYSILIEGWL--NLPHYMHAINLLAE--MCSNGIAYTSKLDAICNDYNFD 413
P+ TY+ LI+G+ N+ M +N + E + + + Y S +D C NFD
Sbjct: 425 SPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 154/345 (44%), Gaps = 7/345 (2%)
Query: 39 NMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLG 98
ML P + +N ++ + AV + + +E + ++P+ T LI +C
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-S 441
Query: 99 RMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVS 158
++ A VL K+L+R PD +L+ G C +G SA + +G
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD----Q 497
Query: 159 VTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNE 216
TY +I+ LC+ A L +E++ + +V MY +I C+ V +A+ + +
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 217 MLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERK 276
ML K P+ T+N LI+G CA G+L++A M ++P VST LIH L K+
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 277 VKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNI 336
A S M+ + +P+ Y T I YC ++ A + M GV+PD+ TY+
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 337 MISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPH 381
+I + A + M +P T+ LI+ L + +
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKY 722
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 168/362 (46%), Gaps = 12/362 (3%)
Query: 84 IATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHD 143
I L+N G ++ V ++L+ P+ ++ G C G + A +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 144 DVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSM 201
+ G +D TY LI C+ + +A ++ ++ + + Y +I +
Sbjct: 243 KIVEAG----LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 202 CEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDV 261
C + + +A DL+ +M P V TY LI C + +A+ M+ IKP++
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 262 STCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHT 321
T LI +LC + K ++A ++ M++ + PNV YN LI+GYC + A +
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 322 MATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPH 381
M +R ++P+ TYN +I C SN + +AM + + M + + PD TY+ LI+G +
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 382 YMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASH 436
+ A LL+ M G+ YTS +D++C ++ + F ++ G + + ++ +
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 437 IV 438
++
Sbjct: 538 LI 539
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 153/351 (43%), Gaps = 25/351 (7%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P + +++ SL + A L LE KG+ P++ T LI+ +C G+++ A
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+L K+L + P++ L+ GLC +G+++ A + + G Q V T LI
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS----TDTILI 609
Query: 166 NELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
+ L + G+ A +Q+ T D Y T I++ C + + DA D+ +M +S
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS- 282
PD+FTY++LI G+ GQ A M+ +P T LI L + + KQ S
Sbjct: 670 PDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSE 729
Query: 283 -----------------VVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA-RFLSHTMAT 324
++ M++ SV PN Y LI G C + + A + H
Sbjct: 730 PELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRN 789
Query: 325 RGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
G++P +N ++S C +EA + M P E+ +LI G
Sbjct: 790 EGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICG 840
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 152/360 (42%), Gaps = 25/360 (6%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
MLS P FN ++ L A L +++ G+ P ++T TILI+
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
G ++A+S ++L +PD TT ++ C G + A +D+ AK + V
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA----EDMMAKMRENGVSP 670
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYN--TIIKSMCEDK--------- 205
TY LI ++G+T A +L+++ + + + ++IK + E K
Sbjct: 671 DLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEP 730
Query: 206 --CV-------SDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKM-E 255
C +L +M+ ++P+ +Y LI G C G LR A F+ M+ E
Sbjct: 731 ELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNE 790
Query: 256 NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA 315
I P + L+ CK +K +A VV MI P + LI G + +
Sbjct: 791 GISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERG 850
Query: 316 RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
+ + G D + I+I + +++ LF+ M+ K ++TYS+LIEG
Sbjct: 851 TSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 171/362 (47%), Gaps = 6/362 (1%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A++ F M + P + +N ++ ++ L + + LKG+ P++ + ++IN
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C GRM VL ++ +R Y D TL+KG C G A+ H ++ G
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDA 210
V +TY LI+ +C+ G A++ L Q+ + + Y T++ + +++A
Sbjct: 344 SV----ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
Y + EM SP V TYN LI G C G++ A+ MK + + PDV + ++
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
C+ V +A V M++ ++P+ Y++LI G+C + +A L M G+ PD
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
TY +I+ C +++A+ L + M K + PD TYS+LI G A LL
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 391 EM 392
++
Sbjct: 580 KL 581
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 192/400 (48%), Gaps = 12/400 (3%)
Query: 47 PPITQFNNILGSLVRMNHYPT-AVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P + +N +L + +R + A ++ +++ ++P++ T ILI FC G ++ A +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+ K+ + P+ TL+ G C +I + KG + + ++Y +I
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNL----ISYNVVI 282
Query: 166 NELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
N LC G +L ++ D YNT+IK C++ A ++ EML ++
Sbjct: 283 NGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
P V TY +LI+ C G + +A+ F + M++ + P+ T L+ ++ + +A V
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
+ M P+V YN LI+G+C+ +M A + M +G++PDV +Y+ ++S C
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----A 398
S +DEA+ + M K IKPD TYS LI+G+ A +L EM G+
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 399 YTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
YT+ ++A C + + + ++ E G D + S ++
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 177/421 (42%), Gaps = 63/421 (14%)
Query: 35 SSFHNMLSMRP-------APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATL 87
+FH L M P + + +++ S+ + + A+ Q+ ++G+ P+ T
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 88 TILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKA 147
T L++ F G MN A+ VL ++ + P L+ G C+ G++ AI +D+K
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 148 KGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDK 205
KG V V+Y +++ C + AL++ R++ E+ D Y+++I+ CE +
Sbjct: 444 KGLSPDV----VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 206 CVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCD 265
+A DLY EML + PD FTY LI +C G L KA+ N M + + PDV T
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 266 PLIHALCKERKVKQA--------------------------------------------- 280
LI+ L K+ + ++A
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619
Query: 281 -----NSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYN 335
+ V +M+ + +P+ YN +I G+C + KA L M G T
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVI 679
Query: 336 IMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSN 395
++ L ++E S+ ++ +AE +L+E + +++LAEM +
Sbjct: 680 ALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKD 739
Query: 396 G 396
G
Sbjct: 740 G 740
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 125/276 (45%), Gaps = 21/276 (7%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A++ +M +P + ++ +L R A+ + +++ KGI PD T + LI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
FC R A + ++L+ PD T L+ C+ G++ A+ H+++ KG
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQI---EEEHTDVQMYN------------- 195
V VTY LIN L + T A +LL ++ E +DV +
Sbjct: 553 PDV----VTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608
Query: 196 -TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKM 254
++IK C +++A ++ ML K PD YN +I+G C G +RKA + M
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668
Query: 255 ENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKA 290
T L+ AL KE KV + NSV+ ++++
Sbjct: 669 SGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRS 704
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 196/415 (47%), Gaps = 39/415 (9%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
++S F+ M+ P FN +L +V + + S + + K + D+ + ILI
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIK 171
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA-------------- 138
C G + +F +L ++ + + P+ TTL+ G C GEI A
Sbjct: 172 GCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVA 231
Query: 139 --------IN--FHDDVKAKGFQF----QVDRV---SVTYRFLINELCEVGETGAALQLL 181
IN F + VK +GF+ Q D V TY ++N+LC+ G T A Q+
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Query: 182 RQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAG 239
++ E ++ YNT+I +C + +++A + ++M I+P++ TYNTLI GFC
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 240 GQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIY 299
G+L KA+ +K + P + T + L+ C++ A +V M + ++P+ Y
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 300 NTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDL 359
LID + + M KA L +M G+ PDVHTY+++I C M+EA LF M
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 360 KDIKPDAETYSILIEGWLNLPHYMHAINLLAEM-----CSNGIAYTSKLDAICND 409
K+ +P+ Y+ +I G+ A+ LL EM N +Y ++ +C +
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKE 526
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 138/302 (45%), Gaps = 6/302 (1%)
Query: 73 QQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLN 132
++++ G+ P++ T ++N C GR AF V ++ +R + TL+ GLC
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 133 GEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQ 192
++ A D +K+ G + +TY LI+ C VG+ G AL L R ++
Sbjct: 317 MKLNEANKVVDQMKSDGINPNL----ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 193 M--YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFN 250
+ YN ++ C S A + EM + I P TY LI F + KA+
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 251 VMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLIN 310
M+ + PDV T LIH C + ++ +A+ + +M++ + EPN IYNT+I GYC
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 311 QMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
+A L M + + P+V +Y MI LC EA L M I P S
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILS 552
Query: 371 IL 372
++
Sbjct: 553 LI 554
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 6/269 (2%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A F M + I +N ++G L R A + Q++ GI P++ T LI
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ FC +G++ A S+ + R P L+ G C G+ A +++ +G
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG-- 403
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSD 209
+ VTY LI+ A+QL +EE DV Y+ +I C +++
Sbjct: 404 --IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A L+ M+ K P+ YNT+I G+C G +A+ M+ + + P+V++ +I
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFI 298
LCKERK K+A +V MI + ++P+ I
Sbjct: 522 VLCKERKSKEAERLVEKMIDSGIDPSTSI 550
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 107/246 (43%), Gaps = 6/246 (2%)
Query: 174 TGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLI 233
+ + L L + E T ++Y II S + + ++ + +NEM+ P +N L+
Sbjct: 77 SSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLL 136
Query: 234 YGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVE 293
+ FFN K + DV + LI C+ +++++ ++ + +
Sbjct: 137 TFVVGSSSFNQWWSFFNENK-SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFS 195
Query: 294 PNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSL 353
PNV IY TLIDG C ++ KA+ L M G+ + TY ++I+ L + + + +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 354 FHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLDAICN 408
+ M + P+ TY+ ++ A + EM G++ Y + + +C
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 409 DYNFDD 414
+ ++
Sbjct: 316 EMKLNE 321
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 172/369 (46%), Gaps = 6/369 (1%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
A +F M+ P + ++ + A ++ + I PD+ T T +I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ FC +G M A + ++ + +PD+ T L+ G C G ++ A H+ + G
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE--EHTDVQMYNTIIKSMCEDKCVSD 209
V VTY LI+ LC+ G+ +A +LL ++ + ++ YN+I+ +C+ + +
Sbjct: 454 PNV----VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A L E ++ D TY TL+ +C G++ KA M + ++P + T + L++
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
C ++ ++ M+ + PN +N+L+ YC+ N + A + M +RGV P
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLL 389
D TY ++ C + M EA LF M K TYS+LI+G+L ++ A +
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 390 AEMCSNGIA 398
+M G+A
Sbjct: 690 DQMRREGLA 698
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 176/358 (49%), Gaps = 6/358 (1%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + ++ ++ R L + ++ KG+ P+ +I C + ++ A
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
+++++ PDT TTL+ G C G+IR+A F ++ ++ V +TY +I+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDV----LTYTAIIS 394
Query: 167 ELCEVGETGAALQLLRQI--EEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
C++G+ A +L ++ + D + +I C+ + DA+ ++N M+ SP
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
+V TY TLI G C G L A + M ++P++ T + +++ LCK +++A +V
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
A + + Y TL+D YC +M KA+ + M +G+ P + T+N++++ C
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSK 402
M+++ L ++M K I P+A T++ L++ + + A + +MCS G+ K
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 163/336 (48%), Gaps = 6/336 (1%)
Query: 67 TAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLM 126
TA+ + ++ G+ ++A+ I+I+ C LGR+ A +L + + Y PD + +T++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 127 KGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE 186
G C GE+ + +K KG + S Y +I LC + + A + ++
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPN----SYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 187 EHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRK 244
+ D +Y T+I C+ + A + EM + I+PDV TY +I GFC G + +
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 245 AVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLID 304
A F+ M + ++PD T LI+ CK +K A V MI+A PNV Y TLID
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 305 GYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKP 364
G C + A L H M G+ P++ TYN +++ LC S ++EA+ L + +
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 365 DAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYT 400
D TY+ L++ + A +L EM G+ T
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 176/386 (45%), Gaps = 11/386 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+ +I+G L R+ A ++ +GI PD T LI+ FC G + A ++
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
R PD T ++ G C G++ A ++ KG + SVT+ LIN C+
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD----SVTFTELINGYCKA 434
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
G A ++ + + +V Y T+I +C++ + A +L +EM + P++FTY
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
N+++ G C G + +AV + + D T L+ A CK ++ +A ++ M+
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
++P + +N L++G+CL + L + M +G+ P+ T+N ++ C N +
Sbjct: 555 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 614
Query: 350 AMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLD 404
A +++ M + + PD +TY L++G + A L EM G + Y+ +
Sbjct: 615 ATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 674
Query: 405 AICNDYNFDDEIEKFMRYKETGGDAD 430
F + E F + + G AD
Sbjct: 675 GFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 170/360 (47%), Gaps = 15/360 (4%)
Query: 70 SLSQQLELKGIAPDIATLTILINCFCHLGRMNY--AFSVLGKILKRAYQ---PDTTALTT 124
SL + L + D+ LI+ F ++N +F +L Y+ D
Sbjct: 121 SLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDV 180
Query: 125 LMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQI 184
+ L G +R A + + G VD +V Y +++ C +T A+ + R+
Sbjct: 181 FFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNV-YLTRLSKDCY--KTATAIIVFREF 237
Query: 185 EEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQL 242
E +V YN +I +C+ + +A+ L M LK +PDV +Y+T++ G+C G+L
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 297
Query: 243 RKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTL 302
K VMK + +KP+ +I LC+ K+ +A + MI+ + P+ +Y TL
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357
Query: 303 IDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDI 362
IDG+C + A + M +R +TPDV TY +IS C M EA LFH M K +
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 363 KPDAETYSILIEGWLNLPHYMHAINLLAEM----CS-NGIAYTSKLDAICNDYNFDDEIE 417
+PD+ T++ LI G+ H A + M CS N + YT+ +D +C + + D E
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 139/341 (40%), Gaps = 37/341 (10%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
+ V A FH M P F ++ + H A + + G +P++ T T
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
LI+ C G ++ A +L ++ K QP+ +++ GLC +G I A+ + +A
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVS 208
G +VTY L++ C+ GE A ++L+
Sbjct: 521 GLNAD----TVTYTTLMDAYCKSGEMDKAQEILK-------------------------- 550
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
EML K + P + T+N L+ GFC G L N M + I P+ +T + L+
Sbjct: 551 -------EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
C +K A ++ M V P+ Y L+ G+C M +A FL M +G +
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
V TY+++I EA +F M + + D E +
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 79/221 (35%), Gaps = 21/221 (9%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S E A ML P I FN ++ L + KGIAP+ T
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
L+ +C + A ++ + R PD L+KG C ++ A ++K
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKC 206
KGF V TY LI + + A ++ Q+ E + DK
Sbjct: 659 GKGFSVSVS----TYSVLIKGFLKRKKFLEAREVFDQMRRE------------GLAADK- 701
Query: 207 VSDAYDLYNEMLLKRISPDVFT--YNTLIYGFCAGGQLRKA 245
+ +D +++ K PD + +I + QLR A
Sbjct: 702 --EIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQLRGA 740
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 172/369 (46%), Gaps = 6/369 (1%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
A +F M+ P + ++ + A ++ + I PD+ T T +I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ FC +G M A + ++ + +PD+ T L+ G C G ++ A H+ + G
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE--EHTDVQMYNTIIKSMCEDKCVSD 209
V VTY LI+ LC+ G+ +A +LL ++ + ++ YN+I+ +C+ + +
Sbjct: 454 PNV----VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A L E ++ D TY TL+ +C G++ KA M + ++P + T + L++
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
C ++ ++ M+ + PN +N+L+ YC+ N + A + M +RGV P
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLL 389
D TY ++ C + M EA LF M K TYS+LI+G+L ++ A +
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 390 AEMCSNGIA 398
+M G+A
Sbjct: 690 DQMRREGLA 698
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 176/358 (49%), Gaps = 6/358 (1%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + ++ ++ R L + ++ KG+ P+ +I C + ++ A
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
+++++ PDT TTL+ G C G+IR+A F ++ ++ V +TY +I+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDV----LTYTAIIS 394
Query: 167 ELCEVGETGAALQLLRQI--EEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
C++G+ A +L ++ + D + +I C+ + DA+ ++N M+ SP
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
+V TY TLI G C G L A + M ++P++ T + +++ LCK +++A +V
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
A + + Y TL+D YC +M KA+ + M +G+ P + T+N++++ C
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSK 402
M+++ L ++M K I P+A T++ L++ + + A + +MCS G+ K
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 163/336 (48%), Gaps = 6/336 (1%)
Query: 67 TAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLM 126
TA+ + ++ G+ ++A+ I+I+ C LGR+ A +L + + Y PD + +T++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 127 KGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE 186
G C GE+ + +K KG + S Y +I LC + + A + ++
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPN----SYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 187 EHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRK 244
+ D +Y T+I C+ + A + EM + I+PDV TY +I GFC G + +
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 245 AVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLID 304
A F+ M + ++PD T LI+ CK +K A V MI+A PNV Y TLID
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 305 GYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKP 364
G C + A L H M G+ P++ TYN +++ LC S ++EA+ L + +
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 365 DAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYT 400
D TY+ L++ + A +L EM G+ T
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 176/386 (45%), Gaps = 11/386 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+ +I+G L R+ A ++ +GI PD T LI+ FC G + A ++
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
R PD T ++ G C G++ A ++ KG + SVT+ LIN C+
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD----SVTFTELINGYCKA 434
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
G A ++ + + +V Y T+I +C++ + A +L +EM + P++FTY
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
N+++ G C G + +AV + + D T L+ A CK ++ +A ++ M+
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
++P + +N L++G+CL + L + M +G+ P+ T+N ++ C N +
Sbjct: 555 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 614
Query: 350 AMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLD 404
A +++ M + + PD +TY L++G + A L EM G + Y+ +
Sbjct: 615 ATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 674
Query: 405 AICNDYNFDDEIEKFMRYKETGGDAD 430
F + E F + + G AD
Sbjct: 675 GFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 170/360 (47%), Gaps = 15/360 (4%)
Query: 70 SLSQQLELKGIAPDIATLTILINCFCHLGRMNY--AFSVLGKILKRAYQ---PDTTALTT 124
SL + L + D+ LI+ F ++N +F +L Y+ D
Sbjct: 121 SLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDV 180
Query: 125 LMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQI 184
+ L G +R A + + G VD +V Y +++ C +T A+ + R+
Sbjct: 181 FFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNV-YLTRLSKDCY--KTATAIIVFREF 237
Query: 185 EEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQL 242
E +V YN +I +C+ + +A+ L M LK +PDV +Y+T++ G+C G+L
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 297
Query: 243 RKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTL 302
K VMK + +KP+ +I LC+ K+ +A + MI+ + P+ +Y TL
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357
Query: 303 IDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDI 362
IDG+C + A + M +R +TPDV TY +IS C M EA LFH M K +
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 363 KPDAETYSILIEGWLNLPHYMHAINLLAEM----CS-NGIAYTSKLDAICNDYNFDDEIE 417
+PD+ T++ LI G+ H A + M CS N + YT+ +D +C + + D E
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 139/341 (40%), Gaps = 37/341 (10%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
+ V A FH M P F ++ + H A + + G +P++ T T
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
LI+ C G ++ A +L ++ K QP+ +++ GLC +G I A+ + +A
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVS 208
G +VTY L++ C+ GE A ++L+
Sbjct: 521 GLNAD----TVTYTTLMDAYCKSGEMDKAQEILK-------------------------- 550
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
EML K + P + T+N L+ GFC G L N M + I P+ +T + L+
Sbjct: 551 -------EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
C +K A ++ M V P+ Y L+ G+C M +A FL M +G +
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
V TY+++I EA +F M + + D E +
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 79/221 (35%), Gaps = 21/221 (9%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S E A ML P I FN ++ L + KGIAP+ T
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
L+ +C + A ++ + R PD L+KG C ++ A ++K
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKC 206
KGF V TY LI + + A ++ Q+ E + DK
Sbjct: 659 GKGFSVSVS----TYSVLIKGFLKRKKFLEAREVFDQMRRE------------GLAADK- 701
Query: 207 VSDAYDLYNEMLLKRISPDVFT--YNTLIYGFCAGGQLRKA 245
+ +D +++ K PD + +I + QLR A
Sbjct: 702 --EIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQLRGA 740
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 178/378 (47%), Gaps = 14/378 (3%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + +N ++ + A+S+ L+ ++PD+ T ++ C G++ A V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
L ++L+R PD T L++ C + + A+ D+++ +G V VTY L+N
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV----VTYNVLVN 282
Query: 167 ELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
+C+ G A++ L + +V +N I++SMC DA L +ML K SP
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
V T+N LI C G L +A+ M +P+ + +PL+H CKE+K+ +A +
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
M+ P++ YNT++ C ++ A + + ++++G +P + TYN +I L +
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE-----MCSNGIAY 399
+A+ L M KD+KPD TYS L+ G AI E + N + +
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
Query: 400 TSKLDAICNDYNFDDEIE 417
S + +C D I+
Sbjct: 523 NSIMLGLCKSRQTDRAID 540
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 187/397 (47%), Gaps = 14/397 (3%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
NM+ P I ++ R+ A + + LE G PD+ T ++I+ +C
Sbjct: 125 LENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCK 184
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
G +N A SVL ++ + PD T+++ LC +G+++ A+ D + + V
Sbjct: 185 AGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV-- 239
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLY 214
+TY LI C G A++LL ++ + DV YN ++ +C++ + +A
Sbjct: 240 --ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
N+M P+V T+N ++ C+ G+ A M + P V T + LI+ LC++
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY 334
+ +A ++ M + +PN YN L+ G+C +M +A M +RG PD+ TY
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Query: 335 NIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCS 394
N M++ LC +++A+ + + + K P TY+ +I+G AI LL EM +
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 395 -----NGIAYTSKLDAICNDYNFDDEIEKFMRYKETG 426
+ I Y+S + + + D+ I+ F ++ G
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 166/356 (46%), Gaps = 6/356 (1%)
Query: 43 MRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNY 102
M +P + +N IL SL A+ + ++ + PD+ T TILI C + +
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 103 AFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYR 162
A +L ++ R PD L+ G+C G + AI F +D+ + G Q V +T+
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV----ITHN 313
Query: 163 FLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLK 220
++ +C G A +LL + + V +N +I +C + A D+ +M
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 221 RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQA 280
P+ +YN L++GFC ++ +A+ + M PD+ T + ++ ALCK+ KV+ A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 281 NSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISW 340
++ + P + YNT+IDG + KA L M + + PD TY+ ++
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
L +DEA+ FH + I+P+A T++ ++ G AI+ L M + G
Sbjct: 494 LSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG 549
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 174/382 (45%), Gaps = 6/382 (1%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S + A+ ML P + + ++ + R + A+ L ++ +G PD+ T
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
+L+N C GR++ A L + QP+ +++ +C G A D+
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCED 204
KGF V VT+ LIN LC G G A+ +L ++ + + YN ++ C++
Sbjct: 337 RKGFSPSV----VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 205 KCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTC 264
K + A + M+ + PD+ TYNT++ C G++ AV N + + P + T
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 265 DPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMAT 324
+ +I L K K +A ++ M ++P+ Y++L+ G ++ +A H
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 325 RGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMH 384
G+ P+ T+N ++ LC S D A+ +M + KP+ +Y+ILIEG
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKE 572
Query: 385 AINLLAEMCSNGIAYTSKLDAI 406
A+ LL E+C+ G+ S + +
Sbjct: 573 ALELLNELCNKGLMKKSSAEQV 594
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 3/202 (1%)
Query: 195 NTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKM 254
N ++ M + + + M+ PD+ TLI GFC G+ RKA +++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 255 ENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTK 314
PDV T + +I CK ++ A SV+ M SV P+V YNT++ C ++ +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 315 ARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIE 374
A + M R PDV TY I+I C + + AM L M + PD TY++L+
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 375 GWLNLPHYMHAINLLAEMCSNG 396
G AI L +M S+G
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSG 304
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 180/364 (49%), Gaps = 10/364 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
++++L SL +++ A +++E G + ++N C G A + KIL
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
K + D+ T+L+ G C +R A+ D V +K + SV+Y LI+ LCEV
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD-VMSK--EVTCAPNSVSYSILIHGLCEV 279
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
G A L Q+ E+ + Y +IK++C+ + A++L++EM+ + P+V TY
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTY 339
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
LI G C G++ +A G M + I P V T + LI+ CK+ +V A ++ M K
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
+ +PNV +N L++G C + + KA L M G++PD+ +YN++I LC M+
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459
Query: 350 AMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAY-----TSKLD 404
A L M+ DI+PD T++ +I + A L M GI+ T+ +D
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 405 AICN 408
+C
Sbjct: 520 GVCK 523
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 180/389 (46%), Gaps = 12/389 (3%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
AP ++ ++ L + A L Q+ KG P T T+LI C G ++ AF+
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+ +++ R +P+ T L+ GLC +G+I A + V K + ++ +TY LI
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA----NGVCRKMVKDRIFPSVITYNALI 378
Query: 166 NELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
N C+ G A +LL +E+ +V+ +N +++ +C A L ML +S
Sbjct: 379 NGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
PD+ +YN LI G C G + A + M +I+PD T +I+A CK+ K A++
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
+ M++ + + TLIDG C + + A F+ T+ + H+ N+++ L
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSK 558
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----A 398
+ E +++ ++ + P TY+ L++G + + +L M +G
Sbjct: 559 GCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYP 618
Query: 399 YTSKLDAICNDYNFDDEIEKFMRYKETGG 427
YT ++ +C + +E EK + + G
Sbjct: 619 YTIIINGLCQ-FGRVEEAEKLLSAMQDSG 646
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 163/367 (44%), Gaps = 6/367 (1%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
A + F M+ P + + ++ L R A + +++ I P + T LI
Sbjct: 319 KAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALI 378
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N +C GR+ AF +L + KRA +P+ LM+GLC G+ A++ + G
Sbjct: 379 NGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIE--EEHTDVQMYNTIIKSMCEDKCVSD 209
+ V+Y LI+ LC G A +LL + + D + II + C+
Sbjct: 439 PDI----VSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADV 494
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A ML K IS D T TLI G C G+ R A+ + I + + ++
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
L K KVK+ +++ + K + P+V Y TL+DG +T + + M G P
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP 614
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLL 389
+V+ Y I+I+ LC ++EA L M + P+ TY+++++G++N A+ +
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674
Query: 390 AEMCSNG 396
M G
Sbjct: 675 RAMVERG 681
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 126/277 (45%), Gaps = 2/277 (0%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
AV ML +P I +N ++ L R H TA L + I PD T T +I
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N FC G+ + A + LG +L++ D TTL+ G+C G+ R A+ + +
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAY 211
++V L ++ C+V E A L + ++ + V Y T++ + ++ ++
Sbjct: 544 TTPHSLNVILDML-SKGCKVKEELAMLGKINKLGLVPS-VVTYTTLVDGLIRSGDITGSF 601
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
+ M L P+V+ Y +I G C G++ +A + M+ + P+ T ++
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 272 CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCL 308
K+ +A V AM++ E N IY++L+ G+ L
Sbjct: 662 VNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVL 698
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 187/384 (48%), Gaps = 17/384 (4%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
+ F++ + V+ TA + +++ +GI+P++ T TILI C GR+ AF + G
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
+ILKR +P ++L+ G C G +RS ++D+ G+ V V Y L++ L
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV----VIYGVLVDGL 471
Query: 169 CEVGETGAALQLLRQI--EEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
+ G A++ ++ + +V ++N++I C +A ++ M + I PDV
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Query: 227 FTYNTLIY------GFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQA 280
T+ T++ FC + + F++M+ I D++ C+ +IH L K +++ A
Sbjct: 532 ATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 591
Query: 281 NSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISW 340
+ +I+ +EP++ YNT+I GYC + ++ +A + + P+ T I+I
Sbjct: 592 SKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHV 651
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI--- 397
LC +N MD A+ +F M K KP+A TY L++ + + L EM GI
Sbjct: 652 LCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 711
Query: 398 --AYTSKLDAICNDYNFDDEIEKF 419
+Y+ +D +C D+ F
Sbjct: 712 IVSYSIIIDGLCKRGRVDEATNIF 735
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 183/428 (42%), Gaps = 47/428 (10%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S + A + ML +P + + ++ L + A + Q+ +G+ P I T
Sbjct: 369 SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
+ LI+ FC G + F++ ++K Y PD L+ GL G + A+ F +
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLR--QIEEEHTDVQMYNTIIK-SMCE 203
+ + V V + LI+ C + AL++ R I DV + T+++ S+ E
Sbjct: 489 GQSIRLNV----VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 204 D--------------------------------------KC--VSDAYDLYNEMLLKRIS 223
D KC + DA +N ++ ++
Sbjct: 545 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 604
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
PD+ TYNT+I G+C+ +L +A F ++K+ P+ T LIH LCK + A +
Sbjct: 605 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 664
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
+ M + +PN Y L+D + + + L M +G++P + +Y+I+I LC
Sbjct: 665 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 724
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKL 403
+DEA ++FH + PD Y+ILI G+ + + A L M NG+ L
Sbjct: 725 RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 784
Query: 404 DAICNDYN 411
++YN
Sbjct: 785 QRALSEYN 792
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 184/450 (40%), Gaps = 54/450 (12%)
Query: 26 FSHEAVNAVSSFHNMLSMRP-APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDI 84
F V FH ++ R I N +L L ++ A L + G AP++
Sbjct: 228 FCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNV 286
Query: 85 ATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDD 144
T LIN FC G M+ AF + + +R +PD A +TL+ G G +
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 145 VKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQI--EEEHTDVQMYNTIIKSMC 202
KG + V V + I+ + G+ A + +++ + +V Y +IK +C
Sbjct: 347 ALHKGVKLDV----VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 203 EDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVS 262
+D + +A+ +Y ++L + + P + TY++LI GFC G LR + M PDV
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 263 TCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTM 322
L+ L K+ + A M+ S+ NV ++N+LIDG+C +N+ +A + M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 323 ATRGVTPDVHTY-----------------------------------------NIMISWL 341
G+ PDV T+ N++I L
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 582
Query: 342 CTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINL-----LAEMCSNG 396
+ +++A F+ + ++PD TY+ +I G+ +L A + + N
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 642
Query: 397 IAYTSKLDAICNDYNFDDEIEKFMRYKETG 426
+ T + +C + + D I F E G
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMAEKG 672
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 141/322 (43%), Gaps = 33/322 (10%)
Query: 109 KILKRAYQPD-TTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ------------FQVD 155
K+ + +P +A ++ L GE+ A++FH V +GF+ VD
Sbjct: 206 KLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD 265
Query: 156 RVSVTYRFL------------------INELCEVGETGAALQLLRQIEEE--HTDVQMYN 195
++ V R L IN C+ GE A L + +E+ D+ Y+
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 196 TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME 255
T+I + + + L+++ L K + DV +++ I + G L A + M +
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 256 NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA 315
I P+V T LI LC++ ++ +A + ++K +EP++ Y++LIDG+C +
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 316 RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
L M G PDV Y +++ L +M AM M + I+ + ++ LI+G
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 376 WLNLPHYMHAINLLAEMCSNGI 397
W L + A+ + M GI
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGI 527
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 118/261 (45%), Gaps = 19/261 (7%)
Query: 162 RFLINELCEVGETGAALQL------LRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYN 215
+FL+ C G AL++ L + + + +M N++I S D+ V D ++
Sbjct: 150 KFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGS---DR-VDLIADHFD 205
Query: 216 EMLLKRISPDVFTYNTLIYG--FCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCK 273
++ I P + + + FC G ++ KA+ F ++ + + +C+ ++ L
Sbjct: 206 KLCRGGIEPSGVSAHGFVLDALFCKG-EVTKALDFHRLVMERGFRVGIVSCNKVLKGLSV 264
Query: 274 ERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHT 333
+ +++ A+ +++ ++ PNV + TLI+G+C +M +A L M RG+ PD+
Sbjct: 265 D-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIA 323
Query: 334 YNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMC 393
Y+ +I + M+ LF K +K D +S I+ ++ A + M
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 394 SNGIA-----YTSKLDAICND 409
GI+ YT + +C D
Sbjct: 384 CQGISPNVVTYTILIKGLCQD 404
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 186/409 (45%), Gaps = 38/409 (9%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
+ F++ + V+ TA + +++ +GI+P++ T TILI C GR+ AF + G
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF------------------ 150
+ILKR +P ++L+ G C G +RS ++D+ G+
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 151 ------QFQVDRVSVTYRF-------LINELCEVGETGAALQLLR--QIEEEHTDVQMYN 195
+F V + + R LI+ C + AL++ R I DV +
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 196 TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME 255
T+++ + + +A L+ M + PD Y TLI FC + + F++M+
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 256 NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA 315
I D++ C+ +IH L K +++ A+ +I+ +EP++ YNT+I GYC + ++ +A
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655
Query: 316 RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
+ + P+ T I+I LC +N MD A+ +F M K KP+A TY L++
Sbjct: 656 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 715
Query: 376 WLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKF 419
+ + L EM GI +Y+ +D +C D+ F
Sbjct: 716 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 176/377 (46%), Gaps = 6/377 (1%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
+ +M+ M P + + ++ L + A+ S ++ + I ++ LI+ +C
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
L R + A V + +PD TT+M+ + G + A+ + F+ ++
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF----FRMFKMGLEP 564
Query: 157 VSVTYRFLINELCEVGETGAALQL--LRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLY 214
++ Y LI+ C+ + LQL L Q + D+ + N +I + + + DA +
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 624
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
N ++ ++ PD+ TYNT+I G+C+ +L +A F ++K+ P+ T LIH LCK
Sbjct: 625 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 684
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY 334
+ A + + M + +PN Y L+D + + + L M +G++P + +Y
Sbjct: 685 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 744
Query: 335 NIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCS 394
+I+I LC +DEA ++FH + PD Y+ILI G+ + + A L M
Sbjct: 745 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLR 804
Query: 395 NGIAYTSKLDAICNDYN 411
NG+ L ++YN
Sbjct: 805 NGVKPDDLLQRALSEYN 821
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 172/386 (44%), Gaps = 11/386 (2%)
Query: 26 FSHEAVNAVSSFHNMLSMRP-APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDI 84
F V FH ++ R I N +L L ++ A L + G AP++
Sbjct: 228 FCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNV 286
Query: 85 ATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDD 144
T LIN FC G M+ AF + + +R +PD A +TL+ G G +
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 145 VKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQI--EEEHTDVQMYNTIIKSMC 202
KG + V V + I+ + G+ A + +++ + +V Y +IK +C
Sbjct: 347 ALHKGVKLDV----VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 203 EDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVS 262
+D + +A+ +Y ++L + + P + TY++LI GFC G LR + M PDV
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 263 TCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTM 322
L+ L K+ + A M+ S+ NV ++N+LIDG+C +N+ +A + M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 323 ATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHY 382
G+ PDV T+ ++ ++EA+ LF M ++PDA Y LI+ +
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582
Query: 383 MHAINLLAEMCSNGIAYTSKLDAICN 408
+ L M N I+ A+CN
Sbjct: 583 TIGLQLFDLMQRNKISADI---AVCN 605
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 174/405 (42%), Gaps = 11/405 (2%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
E A F M P + ++ ++ + L Q KG+ D+ +
Sbjct: 301 EMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
I+ + G + A V ++L + P+ T L+KGLC +G I A + + +
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKC 206
G + + VTY LI+ C+ G + L + + DV +Y ++ + +
Sbjct: 421 GMEPSI----VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL 476
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+ A +ML + I +V +N+LI G+C + +A+ F +M + IKPDV+T
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT 536
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
++ E ++++A + M K +EP+ Y TLID +C + T L M
Sbjct: 537 VMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK 596
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
++ D+ N++I L + +++A F+ + ++PD TY+ +I G+ +L A
Sbjct: 597 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 656
Query: 387 NL-----LAEMCSNGIAYTSKLDAICNDYNFDDEIEKFMRYKETG 426
+ + N + T + +C + + D I F E G
Sbjct: 657 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 141/322 (43%), Gaps = 33/322 (10%)
Query: 109 KILKRAYQPD-TTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ------------FQVD 155
K+ + +P +A ++ L GE+ A++FH V +GF+ VD
Sbjct: 206 KLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD 265
Query: 156 RVSVTYRFL------------------INELCEVGETGAALQLLRQIEEE--HTDVQMYN 195
++ V R L IN C+ GE A L + +E+ D+ Y+
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 196 TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME 255
T+I + + + L+++ L K + DV +++ I + G L A + M +
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 256 NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA 315
I P+V T LI LC++ ++ +A + ++K +EP++ Y++LIDG+C +
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 316 RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
L M G PDV Y +++ L +M AM M + I+ + ++ LI+G
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 376 WLNLPHYMHAINLLAEMCSNGI 397
W L + A+ + M GI
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGI 527
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 96/233 (41%), Gaps = 37/233 (15%)
Query: 28 HEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATL 87
H +A F+N++ + P I +N ++ + A + + L++ P+ TL
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 674
Query: 88 TILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKA 147
TILI+ C M+ A + + ++ +P+ LM + +I + ++++
Sbjct: 675 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 734
Query: 148 KGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCV 207
KG + V+Y +I+ LC+ G V
Sbjct: 735 KGISPSI----VSYSIIIDGLCKRGR---------------------------------V 757
Query: 208 SDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPD 260
+A +++++ + ++ PDV Y LI G+C G+L +A + M +KPD
Sbjct: 758 DEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 169/367 (46%), Gaps = 6/367 (1%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A M S +P +N ++GSL A+ + QL P + T TILI
Sbjct: 176 DATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILI 235
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
G ++ A ++ ++L R +PD T+++G+C G + A +++ KG +
Sbjct: 236 EATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCE 295
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTD--VQMYNTIIKSMCEDKCVSD 209
V ++Y L+ L G+ +L+ ++ E D V Y+ +I ++C D + +
Sbjct: 296 PDV----ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A +L M K ++PD ++Y+ LI FC G+L A+ F M + PD+ + ++
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
LCK K QA + + + PN YNT+ +A + M + G+ P
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLL 389
D TYN MIS LC M+DEA L M + P TY+I++ G+ AIN+L
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL 531
Query: 390 AEMCSNG 396
M NG
Sbjct: 532 ESMVGNG 538
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 188/396 (47%), Gaps = 15/396 (3%)
Query: 32 NAVSSFHNMLSM-RPA--PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
N + S H + +M R P + ++ + + P AV + + LE G PD+
Sbjct: 104 NYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYN 162
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
LIN FC + R++ A VL ++ + + PDT ++ LC G++ A+ + + +
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKC 206
Q V +TY LI G AL+L+ ++ D+ YNTII+ MC++
Sbjct: 223 NCQPTV----ITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
V A+++ + LK PDV +YN L+ G+ + M E P+V T
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
LI LC++ K+++A +++ M + + P+ + Y+ LI +C ++ A TM + G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
PD+ YN +++ LC + D+A+ +F + P++ +Y+ + + + A+
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 387 NLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIE 417
+++ EM SNG I Y S + +C + D+ E
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE 494
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 146/323 (45%), Gaps = 6/323 (1%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+ MLS P + +N I+ + + A + + LELKG PD+ + IL+
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLR 306
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
+ G+ ++ K+ P+ + L+ LC +G+I A+N +K KG
Sbjct: 307 ALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 366
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDA 210
+ +Y LI C G A++ L + + D+ YNT++ ++C++ A
Sbjct: 367 D----AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
+++ ++ SP+ +YNT+ + G +A+ M I PD T + +I
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
LC+E V +A ++ M P+V YN ++ G+C +++ A + +M G P+
Sbjct: 483 LCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPN 542
Query: 331 VHTYNIMISWLCTSNMMDEAMSL 353
TY ++I + + EAM L
Sbjct: 543 ETTYTVLIEGIGFAGYRAEAMEL 565
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 117/280 (41%), Gaps = 40/280 (14%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS-------------------------- 223
D QM +S C ++ L M+ K +
Sbjct: 89 DTQMLKIFHRS-CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM 147
Query: 224 --------PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKER 275
PDVF YN LI GFC ++ A + M+ ++ PD T + +I +LC
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 276 KVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYN 335
K+ A V+ ++ + +P V Y LI+ L + +A L M +RG+ PD+ TYN
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 336 IMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCS- 394
+I +C M+D A + ++LK +PD +Y+IL+ LN + L+ +M S
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 395 ----NGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGDAD 430
N + Y+ + +C D ++ + KE G D
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 186/415 (44%), Gaps = 49/415 (11%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
NAVS F + + NN++ LVR ++ A S +++ + +L+ L+
Sbjct: 56 NAVSVFQQAVDSGSSLAFAG-NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLL 114
Query: 92 NCFCHLGRMNYAFSVLGKILKRAY-----------------------------------Q 116
C+ + + +AF VL +LKR +
Sbjct: 115 ECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLM 174
Query: 117 PDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGA 176
PD + T+++G C E+ A+ +++K G + + VT+ LI+ C+ G+
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSL----VTWGILIDAFCKAGKMDE 230
Query: 177 ALQLLRQIE--EEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIY 234
A+ L++++ D+ +Y ++I+ C+ + L++E+L + SP TYNTLI
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 235 GFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEP 294
GFC GQL++A F M ++P+V T LI LC K K+A ++ MI+ EP
Sbjct: 291 GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP 350
Query: 295 NVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLF 354
N YN +I+ C + A + M R PD TYNI++ LC +DEA L
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Query: 355 HYMDLKD---IKPDAETYSILIEGWLNLPHYMHAI---NLLAEMCSNGIAYTSKL 403
+ M LKD PD +Y+ LI G A+ +LL E G T+ +
Sbjct: 411 YLM-LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 183/440 (41%), Gaps = 70/440 (15%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
E AVS M P + +N ++ A+ L+ +++ G + + T
Sbjct: 157 ECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWG 216
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
ILI+ FC G+M+ A L ++ + D T+L++G C GE+ D+V +
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276
Query: 149 G---------------------------FQFQVDRVS----VTYRFLINELCEVGETGAA 177
G F+F ++R TY LI+ LC VG+T A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 178 LQLLRQI--EEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRI------------- 222
LQLL + ++E + YN II +C+D V+DA ++ M +R
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Query: 223 ------------------------SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
PDV +YN LI+G C +L +A+ ++++ +
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFL 318
D T + L+++ K V +A + + + + N Y +IDG+C + A+ L
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516
Query: 319 SHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLN 378
M + P V YN ++S LC +D+A LF M + PD +++I+I+G L
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576
Query: 379 LPHYMHAINLLAEMCSNGIA 398
A +LL M G++
Sbjct: 577 AGDIKSAESLLVGMSRAGLS 596
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 120/246 (48%), Gaps = 7/246 (2%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
+V +N ++K +C + A L EM + PDVF+YNT+I GFC G +L KA+
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
N MK + T LI A CK K+ +A + M +E ++ +Y +LI G+C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
++ + + L + RG +P TYN +I C + EA +F +M + ++P+ TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 370 SILIEGWLNLPHYMHAINLLAEMCS-----NGIAYTSKLDAICNDYNFDDEIE--KFMRY 422
+ LI+G + A+ LL M N + Y ++ +C D D +E + M+
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 423 KETGGD 428
+ T D
Sbjct: 381 RRTRPD 386
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 152/339 (44%), Gaps = 8/339 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+ + M+ P +N I+ L + AV + + ++ + PD T IL+
Sbjct: 336 ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG 395
Query: 93 CFCHLGRMNYAFSVLGKILKRA--YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
C G ++ A +L +LK + PD + L+ GLC + A++ +D + K
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK-- 453
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVS 208
DRV T L+N + G+ A++L +QI + + Y +I C+ ++
Sbjct: 454 LGAGDRV--TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLN 511
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
A L +M + + P VF YN L+ C G L +A F M+ +N PDV + + +I
Sbjct: 512 VAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMI 571
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
K +K A S++ M +A + P++F Y+ LI+ + + + +A M G
Sbjct: 572 DGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE 631
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAE 367
PD H + ++ + + D+ L + KDI D E
Sbjct: 632 PDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKE 670
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 160/331 (48%), Gaps = 6/331 (1%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P + +N+++ + A+ + + KG P++ + TIL++ FC LG+++ A++
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
VL ++ +P+T L+ C I A+ ++ KG + V T+ LI
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV----YTFNSLI 501
Query: 166 NELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
+ LCEV E AL LLR + E + YNT+I + + +A L NEM+ +
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
D TYN+LI G C G++ KA F M + P +C+ LI+ LC+ V++A
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEF 621
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
M+ P++ +N+LI+G C ++ + + G+ PD T+N ++SWLC
Sbjct: 622 QKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAETYSILIE 374
+ +A L P+ T+SIL++
Sbjct: 682 GGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 188/398 (47%), Gaps = 15/398 (3%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A + F++MLS + P + F ++ + +N +A+SL + + G P+ LI+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
R+N A +L ++ PD ++ GLC I A + + +GF
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYD 212
+TY +L+N LC++G AA L +I + ++ ++NT+I + DA
Sbjct: 321 D----DITYGYLMNGLCKIGRVDAAKDLFYRIPK--PEIVIFNTLIHGFVTHGRLDDAKA 374
Query: 213 LYNEMLLK-RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
+ ++M+ I PDV TYN+LIYG+ G + A+ + M+ + KP+V + L+
Sbjct: 375 VLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434
Query: 272 CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV 331
CK K+ +A +V+ M ++PN +N LI +C +++ +A + M +G PDV
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494
Query: 332 HTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE 391
+T+N +IS LC + + A+ L M + + + TY+ LI +L A L+ E
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 392 MCSNG-----IAYTSKLDAICNDYNFDDE---IEKFMR 421
M G I Y S + +C D EK +R
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 177/370 (47%), Gaps = 9/370 (2%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVS-LSQQLELKGIAPDIATLTI 89
+ V + ++ P P I FN ++ V A + LS + GI PD+ T
Sbjct: 335 IGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 394
Query: 90 LINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKG 149
LI + G + A VL + + +P+ + T L+ G C G+I A N +++ A G
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 150 FQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCV 207
+ +V + LI+ C+ A+++ R++ + DV +N++I +CE +
Sbjct: 455 LKPN----TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 208 SDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPL 267
A L +M+ + + + TYNTLI F G++++A N M + D T + L
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 268 IHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGV 327
I LC+ +V +A S+ M++ P+ N LI+G C + +A M RG
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 328 TPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMH-AI 386
TPD+ T+N +I+ LC + +++ +++F + + I PD T++ L+ WL +++ A
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS-WLCKGGFVYDAC 689
Query: 387 NLLAEMCSNG 396
LL E +G
Sbjct: 690 LLLDEGIEDG 699
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 176/399 (44%), Gaps = 38/399 (9%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+ M M P FN+++ L + + A + ++ ++G APD T L+N
Sbjct: 271 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 330
Query: 93 CFCHLGRMNYAFSVLGKILK--------------------------------RAYQPDTT 120
C +GR++ A + +I K PD
Sbjct: 331 GLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390
Query: 121 ALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQL 180
+L+ G G + A+ D++ KG + V +Y L++ C++G+ A +
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV----YSYTILVDGFCKLGKIDEAYNV 446
Query: 181 LRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA 238
L ++ + + +N +I + C++ + +A +++ EM K PDV+T+N+LI G C
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 239 GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFI 298
+++ A+ M E + + T + LI+A + ++K+A +V M+ +
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 566
Query: 299 YNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
YN+LI G C ++ KAR L M G P + NI+I+ LC S M++EA+ M
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
L+ PD T++ LI G + + ++ + GI
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 124/273 (45%), Gaps = 6/273 (2%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P FN ++ + + + P AV + +++ KG PD+ T LI+ C + + +A +
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWL 516
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
L ++ +T TL+ GEI+ A +++ +G +TY LI
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD----EITYNSLIK 572
Query: 167 ELCEVGETGAALQLL-RQIEEEHTDVQMY-NTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
LC GE A L + + + H + N +I +C V +A + EM+L+ +P
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
D+ T+N+LI G C G++ + F ++ E I PD T + L+ LCK V A ++
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLL 692
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARF 317
I+ PN ++ L+ + + RF
Sbjct: 693 DEGIEDGFVPNHRTWSILLQSIIPQETLDRRRF 725
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 130/284 (45%), Gaps = 5/284 (1%)
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+ Y+ L+ L NGE ++ +K +G F+ + + ++ ++
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFK-ESLFISIMRDYDKAGFP 162
Query: 172 GETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNT 231
G+T + +R + + YN +++ + C A +++ +ML ++I P +FT+
Sbjct: 163 GQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGV 222
Query: 232 LIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKAS 291
++ FCA ++ A+ M P+ LIH+L K +V +A ++ M
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282
Query: 292 VEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAM 351
P+ +N +I G C +++ +A + + M RG PD TY +++ LC +D A
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342
Query: 352 SLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSN 395
LF+ + KP+ ++ LI G++ A +L++M ++
Sbjct: 343 DLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 52/124 (41%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
+ E A S F ML AP N ++ L R AV +++ L+G PDI T
Sbjct: 577 AGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 636
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
LIN C GR+ ++ K+ PDT TLM LC G + A D+
Sbjct: 637 FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGI 696
Query: 147 AKGF 150
GF
Sbjct: 697 EDGF 700
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 8/179 (4%)
Query: 251 VMKMENI---KPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC 307
+++M N+ +P + + ++ L K A +V M+ + P +F + ++ +C
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 308 LINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAE 367
+N++ A L M G P+ Y +I L N ++EA+ L M L PDAE
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 368 TYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKFMR 421
T++ +I G A ++ M G I Y ++ +C D + F R
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR 347
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 171/380 (45%), Gaps = 11/380 (2%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
+ M+S P + + + + Y L ++ GI P++ TI I C
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
+M A + + K P+ + ++ G C G +R A + ++ V
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNV-- 304
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEEHTD--VQMYNTIIKSMCEDKCVSDAYDLY 214
V + L++ C+ E A L + + D + +YN +I C+ + +A L
Sbjct: 305 --VVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
+EM +SPDVFTY LI G C Q+ +A F MK E I P +T + LIH CKE
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 422
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY 334
++QA + + M + VEPN+ ++TLIDGYC + + A L M +G+ PDV TY
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482
Query: 335 NIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE--- 391
+I M EA+ L+ M I P+ T++ L++G+ AI+ E
Sbjct: 483 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQ 542
Query: 392 --MCSNGIAYTSKLDAICND 409
C N + +T ++ +C +
Sbjct: 543 QRSCWNHVGFTCLIEGLCQN 562
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 168/357 (47%), Gaps = 6/357 (1%)
Query: 43 MRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNY 102
M+ +P +IL LVR + + Q + +G+ PD+ +L C G +
Sbjct: 158 MKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSK 217
Query: 103 AFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYR 162
+L ++ +P+ T + LC + ++ A + +K G + TY
Sbjct: 218 KEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNL----YTYS 273
Query: 163 FLINELCEVGETGAALQLLRQI--EEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLK 220
+I+ C+ G A L ++I E +V ++ T++ C+ + + A L+ M+
Sbjct: 274 AMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKF 333
Query: 221 RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQA 280
+ P+++ YN LI+G C G + +AVG + M+ N+ PDV T LI+ LC E +V +A
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393
Query: 281 NSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISW 340
N + M + P+ YN+LI GYC M +A L M GV P++ T++ +I
Sbjct: 394 NRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDG 453
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
C + AM L+ M +K I PD TY+ LI+ + A+ L ++M GI
Sbjct: 454 YCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 172/429 (40%), Gaps = 76/429 (17%)
Query: 11 IPSLFMRYHSHS-PRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAV 69
I SL R HS P SH NA+ + P I F+ ++ + M + A+
Sbjct: 98 IKSLIERLKRHSEPSNMSHRLFNALEDIQS-----PKFSIGVFSLLIMEFLEMGLFEEAL 152
Query: 70 SLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGL 129
+S++++ +PD ++N R + + ++ R PD L +
Sbjct: 153 WVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCC 209
Query: 130 CLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT 189
G D++ + G +
Sbjct: 210 FKQGLYSKKEKLLDEMTSLGIK-------------------------------------P 232
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
+V +Y I +C D + +A ++ M + P+++TY+ +I G+C G +R+A G +
Sbjct: 233 NVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLY 292
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
+ + + P+V L+ CK R++ A S+ M+K V+PN+++YN LI G+C
Sbjct: 293 KEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKS 352
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
M +A L M + ++PDV TY I+I+ LC + + EA LF M + I P + TY
Sbjct: 353 GNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATY 412
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGDA 429
+ LI G+ C +YN + ++ +G +
Sbjct: 413 NSLIHGY------------------------------CKEYNMEQALDLCSEMTASGVEP 442
Query: 430 DFLIASHIV 438
+ + S ++
Sbjct: 443 NIITFSTLI 451
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 174/392 (44%), Gaps = 35/392 (8%)
Query: 40 MLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGR 99
M S+ P + + + L R N A + + ++ G+ P++ T + +I+ +C G
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGN 284
Query: 100 MNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA-------INFHDD-------- 144
+ A+ + +IL P+ TL+ G C E+ +A + F D
Sbjct: 285 VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNC 344
Query: 145 -----------VKAKGFQFQVDRVSV-----TYRFLINELCEVGETGAALQLLRQIEEEH 188
++A G +++ +++ TY LIN LC + A +L ++++ E
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404
Query: 189 T--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAV 246
YN++I C++ + A DL +EM + P++ T++TLI G+C ++ A+
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAM 464
Query: 247 GFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGY 306
G + M ++ I PDV T LI A KE +K+A + + M++A + PN + L+DG+
Sbjct: 465 GLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524
Query: 307 CLINQMTKA-RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPD 365
+++ A F R V + +I LC + + A F M I PD
Sbjct: 525 WKEGRLSVAIDFYQENNQQRSCWNHV-GFTCLIEGLCQNGYILRASRFFSDMRSCGITPD 583
Query: 366 AETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
+Y +++G L + L +M GI
Sbjct: 584 ICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 615
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 140/307 (45%), Gaps = 6/307 (1%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
+ E V A S F +M+ P + +N ++ + + AV L ++E ++PD+ T
Sbjct: 317 ARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFT 376
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
TILIN C ++ A + K+ P + +L+ G C + A++ ++
Sbjct: 377 YTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMT 436
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQ--IEEEHTDVQMYNTIIKSMCED 204
A G + + +T+ LI+ C V + AA+ L + I+ DV Y +I + ++
Sbjct: 437 ASGVEPNI----ITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKE 492
Query: 205 KCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTC 264
+ +A LY++ML I P+ T+ L+ GF G+L A+ F+ + +
Sbjct: 493 ANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGF 552
Query: 265 DPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMAT 324
LI LC+ + +A+ + M + P++ Y +++ G+ ++T L M
Sbjct: 553 TCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIK 612
Query: 325 RGVTPDV 331
G+ P++
Sbjct: 613 TGILPNL 619
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 136/312 (43%), Gaps = 9/312 (2%)
Query: 19 HSHSPRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELK 78
H H EAV +S M S+ +P + + ++ L + A L Q+++ +
Sbjct: 347 HGHCKSGNMLEAVGLLSE---MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE 403
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
I P AT LI+ +C M A + ++ +P+ +TL+ G C +I++A
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNT 196
+ + ++ KG V VTY LI+ + AL+L + E H + +
Sbjct: 464 MGLYFEMTIKGIVPDV----VTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 519
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN 256
++ ++ +S A D Y E +R + + LI G C G + +A FF+ M+
Sbjct: 520 LVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCG 579
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKAR 316
I PD+ + ++ +E+++ + MIK + PN+ + L Y + A
Sbjct: 580 ITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSAC 639
Query: 317 FLSHTMATRGVT 328
FL+++ + V+
Sbjct: 640 FLTNSSRLKTVS 651
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 166/345 (48%), Gaps = 16/345 (4%)
Query: 82 PDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCL---NGEIRSA 138
P A I ++ + H G+ + A + K+++ +P+ TL+ GL + I SA
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE---HTDVQMYN 195
DD+ G V T+ L+N C G+ AL +L ++ E + D YN
Sbjct: 189 REVFDDMVKIGVSLNVQ----TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 196 TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME 255
TI+K+M + +SD +L +M + P+ TYN L+YG+C G L++A +MK
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 256 NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA 315
N+ PD+ T + LI+ LC +++ ++ AM ++P+V YNTLIDG + +A
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 316 RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAM-SLFHYMDLKDIKPDAETYSILIE 374
R L M GV + T+NI + WLC + + +D+ PD TY LI+
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 375 GWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDD 414
+L + A+ ++ EM G I + LDA+C + D+
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDE 469
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 177/385 (45%), Gaps = 35/385 (9%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P +NN++ ++ A + + ++ + PD+ T ILIN C+ G M +
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL 332
Query: 107 LGKILKRAYQPDTTALTTLMKG---LCLNGEIRSAIN--FHDDVKAKGFQFQVD------ 155
+ + QPD TL+ G L L+ E R + +D VKA +
Sbjct: 333 MDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCK 392
Query: 156 ---------RVS------------VTYRFLINELCEVGETGAALQLLRQIEEEHTDVQM- 193
+V VTY LI +VG+ AL+++R++ ++ +
Sbjct: 393 EEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTI 452
Query: 194 -YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
NTI+ ++C+++ + +A++L N + D TY TLI GF ++ KA+ ++ M
Sbjct: 453 TLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Query: 253 KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQM 312
K I P VST + LI LC K + A + ++ + P+ +N++I GYC ++
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572
Query: 313 TKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSIL 372
KA + PD +T NI+++ LC M ++A++ F+ + +++ + D TY+ +
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTM 631
Query: 373 IEGWLNLPHYMHAINLLAEMCSNGI 397
I + A +LL+EM G+
Sbjct: 632 ISAFCKDKKLKEAYDLLSEMEEKGL 656
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 100/236 (42%), Gaps = 46/236 (19%)
Query: 26 FSHEAV-NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDI 84
F E V A+ + M ++ P ++ FN+++G L A+ +L G+ PD
Sbjct: 497 FREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDD 556
Query: 85 ATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDD 144
+T +I +C GR+ AF + +K +++PD L+ GLC G A+NF +
Sbjct: 557 STFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNT 616
Query: 145 VKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCED 204
+ IEE D YNT+I + C+D
Sbjct: 617 L--------------------------------------IEEREVDTVTYNTMISAFCKD 638
Query: 205 KCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQ-------LRKAVGFFNVMK 253
K + +AYDL +EM K + PD FTYN+ I G+ L+K G F MK
Sbjct: 639 KKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMK 694
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 174/379 (45%), Gaps = 8/379 (2%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
+ V F +M S P + F++++ R + A+ ++ G+ PD T
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
ILI +C G ++ A ++ ++L++ D T++ GLC + A +++ +
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKC 206
S T LI+ C++G A++L ++++E+ DV YNT++ +
Sbjct: 475 ALFPD----SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+ A +++ +M+ K I P +Y+ L+ C+ G L +A ++ M +NIKP V C+
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATR- 325
+I C+ S + MI P+ YNTLI G+ M+KA L M
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 326 -GVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMH 384
G+ PDV TYN ++ C N M EA + M + + PD TY+ +I G+++ +
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 385 AINLLAEMCSNGIAYTSKL 403
A + EM G + K
Sbjct: 711 AFRIHDEMLQRGFSPDDKF 729
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 173/363 (47%), Gaps = 11/363 (3%)
Query: 53 NNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILK 112
N ++GSLVR+ A + Q++ G+ ++ TL I++N C G+M + L ++ +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 113 RAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVG 172
+ PD TL+ G + A + + KGF V TY +IN LC+ G
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGV----YTYNTVINGLCKHG 319
Query: 173 ETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYN 230
+ A ++ ++ D Y +++ C+ V + ++++M + + PD+ ++
Sbjct: 320 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFS 379
Query: 231 TLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKA 290
+++ F G L KA+ +FN +K + PD LI C++ + A ++ M++
Sbjct: 380 SMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Query: 291 SVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEA 350
+V YNT++ G C + +A L + M R + PD +T I+I C + A
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 499
Query: 351 MSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDA 405
M LF M K I+ D TY+ L++G+ + A + A+M S I+Y+ ++A
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Query: 406 ICN 408
+C+
Sbjct: 560 LCS 562
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 160/352 (45%), Gaps = 6/352 (1%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P I +N ++ + A L + KG +P + T +IN C G+ A V
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
++L+ PD+T +L+ C G++ D++++ + V + +++
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDL----VCFSSMMS 383
Query: 167 ELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
G AL ++E D +Y +I+ C +S A +L NEML + +
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
DV TYNT+++G C L +A FN M + PD T LI CK ++ A +
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
M + + +V YNTL+DG+ + + A+ + M ++ + P +Y+I+++ LC+
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
+ EA ++ M K+IKP + +I+G+ + + L +M S G
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 147/320 (45%), Gaps = 6/320 (1%)
Query: 75 LELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGE 134
L KG I LI +G + A+ V +I + + L ++ LC +G+
Sbjct: 191 LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK 250
Query: 135 IRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQ 192
+ F V+ KG + VTY LI+ G A +L+ + + V
Sbjct: 251 MEKVGTFLSQVQEKGVYPDI----VTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVY 306
Query: 193 MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
YNT+I +C+ A +++ EML +SPD TY +L+ C G + + F+ M
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Query: 253 KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQM 312
+ ++ PD+ ++ + + +A ++ +A + P+ IY LI GYC +
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 313 TKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSIL 372
+ A L + M +G DV TYN ++ LC M+ EA LF+ M + + PD+ T +IL
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 373 IEGWLNLPHYMHAINLLAEM 392
I+G L + +A+ L +M
Sbjct: 487 IDGHCKLGNLQNAMELFQKM 506
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 158/346 (45%), Gaps = 28/346 (8%)
Query: 86 TLTILINCFCHLGRMNYAFSVLGKILKRAY-----------------QPDTTALTTLMKG 128
+L+ +I+ GR++ A S L ++++R+ + + L++
Sbjct: 115 SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRT 174
Query: 129 LCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH 188
++R A +++KGF +D + LI L +G A + ++I
Sbjct: 175 YVQARKLREAHEAFTLLRSKGFTVSIDACNA----LIGSLVRIGWVELAWGVYQEISRSG 230
Query: 189 TDVQMY--NTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAV 246
+ +Y N ++ ++C+D + +++ K + PD+ TYNTLI + + G + +A
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 247 GFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGY 306
N M + P V T + +I+ LCK K ++A V A M+++ + P+ Y +L+
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 307 CLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDA 366
C + + + M +R V PD+ ++ M+S S +D+A+ F+ + + PD
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 367 ETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLDAIC 407
Y+ILI+G+ A+NL EM G A Y + L +C
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC 456
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 117/251 (46%), Gaps = 5/251 (1%)
Query: 193 MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
+++ +I++ + + + +A++ + + K + + N LI G + A G + +
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 253 KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQM 312
+ +V T + +++ALCK+ K+++ + ++ + + V P++ YNTLI Y M
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 313 TKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSIL 372
+A L + M +G +P V+TYN +I+ LC + A +F M + PD+ TY L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 373 IEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLDAICNDYNFDDEIEKFMRYKETGG 427
+ + + ++M S + ++S + N D + F KE G
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 428 DADFLIASHIV 438
D +I + ++
Sbjct: 407 IPDNVIYTILI 417
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 74/180 (41%), Gaps = 5/180 (2%)
Query: 256 NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA 315
N + S D LI + RK+++A+ + ++ N LI I + A
Sbjct: 160 NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 316 RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
+ ++ GV +V+T NIM++ LC M++ + + K + PD TY+ LI
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 376 WLNLPHYMHAINLLAEMCSNGIA-----YTSKLDAICNDYNFDDEIEKFMRYKETGGDAD 430
+ + A L+ M G + Y + ++ +C ++ E F +G D
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 174/398 (43%), Gaps = 38/398 (9%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+ F+ M P N+IL L R+N A + I ++ T I+IN
Sbjct: 174 AIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMIN 233
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C G++ A LG + +P TL++G L G I A ++K+KGFQ
Sbjct: 234 VLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQP 293
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIE---------------EEHTDVQM---- 193
+ TY +++ +C G L+ +++I + D++M
Sbjct: 294 DMQ----TYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 194 ---------------YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA 238
YNT+I + + + A L E+ K I D TYN LI G+C
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409
Query: 239 GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFI 298
G +KA + M + I+P T LI+ LC++ K ++A+ + ++ ++P++ +
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM 469
Query: 299 YNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
NTL+DG+C I M +A L M + PD TYN ++ LC +EA L M
Sbjct: 470 MNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMK 529
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
+ IKPD +Y+ LI G+ HA + EM S G
Sbjct: 530 RRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLG 567
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 159/338 (47%), Gaps = 15/338 (4%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + +N IL M + A + ++++ G+ PD + ILI + G + AF+
Sbjct: 293 PDMQTYNPILSW---MCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
+++K+ P TL+ GL + +I +A +++ KG SVTY LIN
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLD----SVTYNILIN 405
Query: 167 ELCEVGETGAALQLLRQIEEEHTD-VQ----MYNTIIKSMCEDKCVSDAYDLYNEMLLKR 221
C+ G+ A L +E TD +Q Y ++I +C +A +L+ +++ K
Sbjct: 406 GYCQHGDAKKAFALH---DEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
+ PD+ NTL+ G CA G + +A M M +I PD T + L+ LC E K ++A
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
++ M + ++P+ YNTLI GY A + M + G P + TYN ++ L
Sbjct: 523 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582
Query: 342 CTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNL 379
+ + A L M + I P+ ++ +IE NL
Sbjct: 583 SKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 156/382 (40%), Gaps = 41/382 (10%)
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDV--- 145
+L+ C C L ++ A + ++ + P T ++ L I +A F+ D+
Sbjct: 160 LLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRM 219
Query: 146 -----------------------KAKGF-----QFQVDRVSVTYRFLINELCEVGETGAA 177
KAKGF F + VTY L+ G A
Sbjct: 220 EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGA 279
Query: 178 LQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYG 235
++ +++ + D+Q YN I+ MC + A ++ EM + PD +YN LI G
Sbjct: 280 RLIISEMKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYNILIRG 336
Query: 236 FCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPN 295
G L A + + M + + P T + LIH L E K++ A ++ + + + +
Sbjct: 337 CSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLD 396
Query: 296 VFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFH 355
YN LI+GYC KA L M T G+ P TY +I LC N EA LF
Sbjct: 397 SVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFE 456
Query: 356 YMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM-----CSNGIAYTSKLDAICNDY 410
+ K +KPD + L++G + + A +LL EM + + Y + +C +
Sbjct: 457 KVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEG 516
Query: 411 NFDDEIEKFMRYKETGGDADFL 432
F++ E K G D +
Sbjct: 517 KFEEARELMGEMKRRGIKPDHI 538
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 193 MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
+++ +++ C+ + V +A + + M K P T N ++ ++ A F+ M
Sbjct: 157 LFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADM 216
Query: 253 KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQM 312
IK +V T + +I+ LCKE K+K+A + M ++P + YNTL+ G+ L ++
Sbjct: 217 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276
Query: 313 TKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIK--PDAETYS 370
AR + M ++G PD+ TYN ++SW+C E + ++K+I PD+ +Y+
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR-----EMKEIGLVPDSVSYN 331
Query: 371 ILIEGWLNLPHYMHAINLLAEMCSNGIAYT 400
ILI G N A EM G+ T
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPT 361
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 116/253 (45%), Gaps = 8/253 (3%)
Query: 186 EEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKA 245
E ++V +N +I +C++ + A M + I P + TYNTL+ GF G++ A
Sbjct: 220 EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGA 279
Query: 246 VGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDG 305
+ MK + +PD+ T +P++ +C E + A+ V+ M + + P+ YN LI G
Sbjct: 280 RLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRG 336
Query: 306 YCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPD 365
+ A M +G+ P +TYN +I L N ++ A L + K I D
Sbjct: 337 CSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLD 396
Query: 366 AETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKFM 420
+ TY+ILI G+ A L EM ++GI YTS + +C + E F
Sbjct: 397 SVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFE 456
Query: 421 RYKETGGDADFLI 433
+ G D ++
Sbjct: 457 KVVGKGMKPDLVM 469
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 37/243 (15%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
+A A + M++ P + +++ L R N A L +++ KG+ PD+ +
Sbjct: 412 DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMN 471
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
L++ C +G M+ AFS+L ++ + PD LM+GLC G+ A ++K +
Sbjct: 472 TLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 531
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVS 208
G I+ +H YNT+I +
Sbjct: 532 G----------------------------------IKPDHIS---YNTLISGYSKKGDTK 554
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
A+ + +EML +P + TYN L+ G + A MK E I P+ S+ +I
Sbjct: 555 HAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Query: 269 HAL 271
A+
Sbjct: 615 EAM 617
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 182/380 (47%), Gaps = 7/380 (1%)
Query: 21 HSPRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGI 80
H F H + A+ F++M+S+ P + + ++ SL + A + +E G
Sbjct: 200 HGLVKFRHFGL-AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGC 258
Query: 81 APDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAIN 140
+I +LI+ C ++ A + + + +PD TL+ GLC E +
Sbjct: 259 DVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLE 318
Query: 141 FHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE--EHTDVQMYNTII 198
D++ +F +V+ L+ L + G+ AL L++++ + ++ +YN +I
Sbjct: 319 MMDEMLC--LRFSPSEAAVSS--LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALI 374
Query: 199 KSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
S+C+ + +A L++ M + P+ TY+ LI FC G+L A+ F M +K
Sbjct: 375 DSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK 434
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFL 318
V + LI+ CK + A +A MI +EP V Y +L+ GYC ++ KA L
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 319 SHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLN 378
H M +G+ P ++T+ ++S L + ++ +A+ LF+ M ++KP+ TY+++IEG+
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 379 LPHYMHAINLLAEMCSNGIA 398
A L EM GI
Sbjct: 555 EGDMSKAFEFLKEMTEKGIV 574
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 175/392 (44%), Gaps = 37/392 (9%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
I +N ++ L + AV + + L K + PD+ T L+ C + ++
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHD------------------DVKAKGF 150
++L + P A+++L++GL G+I A+N D KG
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 151 QFQ-----VDRVS--------VTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMY--N 195
+F DR+ VTY LI+ C G+ AL L ++ + + +Y N
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 196 TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME 255
++I C+ +S A EM+ K++ P V TY +L+ G+C+ G++ KA+ ++ M +
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Query: 256 NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA 315
I P + T L+ L + ++ A + M + +V+PN YN +I+GYC M+KA
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 316 RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
M +G+ PD ++Y +I LC + EA + + + + Y+ L+ G
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621
Query: 376 WLNLPHYMHAINLLAEMCSNGIAYTSKLDAIC 407
+ A+++ EM G+ LD +C
Sbjct: 622 FCREGKLEEALSVCQEMVQRGV----DLDLVC 649
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 169/408 (41%), Gaps = 41/408 (10%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
A+ +H M AP I F +L L R AV L ++ + P+ T ++I
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+C G M+ AF L ++ ++ PDT + L+ GLCL G+ A F D + +
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCEDKCVSD 209
+ Y L++ C G+ AL + +++ + D+ + Y +I + K
Sbjct: 610 LN----EICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
+ L EM + + PD Y ++I G ++A G +++M E P+ T +I+
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 270 ALCKERKVKQANSVVAAMIKASVEP----------------------------------- 294
LCK V +A + + M S P
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA 785
Query: 295 NVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLF 354
N YN LI G+C ++ +A L M GV+PD TY MI+ LC N + +A+ L+
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 355 HYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSK 402
+ M K I+PD Y+ LI G A L EM G+ +K
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/511 (22%), Positives = 200/511 (39%), Gaps = 119/511 (23%)
Query: 28 HEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATL 87
EA+N V ++ +P + +N ++ SL + + A L ++ G+ P+ T
Sbjct: 349 EEALNLVK---RVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405
Query: 88 TILINCFCHLGRMNYAFSVLGKI-----------------------------------LK 112
+ILI+ FC G+++ A S LG++ +
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN 465
Query: 113 RAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVG 172
+ +P T+LM G C G+I A+ + ++ KG + T+ L++ L G
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI----YTFTTLLSGLFRAG 521
Query: 173 ETGAALQLLRQIEEEHTDVQ--MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYN 230
A++L ++ E + YN +I+ CE+ +S A++ EM K I PD ++Y
Sbjct: 522 LIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYR 581
Query: 231 TLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKA 290
LI+G C GQ +A F + + N + + L+H C+E K+++A SV M++
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR 641
Query: 291 SVEPNVFIYNTLIDG----------YCLINQM-------------------------TKA 315
V+ ++ Y LIDG + L+ +M +A
Sbjct: 642 GVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701
Query: 316 RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSL---------------------- 353
+ M G P+ TY +I+ LC + ++EA L
Sbjct: 702 FGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDI 761
Query: 354 -------------FHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG---- 396
H LK + + TY++LI G+ A L+ M +G
Sbjct: 762 LTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPD 821
Query: 397 -IAYTSKLDAICNDYNFDDEIEKFMRYKETG 426
I YT+ ++ +C + IE + E G
Sbjct: 822 CITYTTMINELCRRNDVKKAIELWNSMTEKG 852
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 146/328 (44%), Gaps = 16/328 (4%)
Query: 110 ILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELC 169
I K + P+ L+ L+ GL A+ +D+ + G + V Y +I LC
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDV----YIYTGVIRSLC 238
Query: 170 EVGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVF 227
E+ + A +++ +E DV + YN +I +C+ + V +A + ++ K + PDV
Sbjct: 239 ELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVV 298
Query: 228 TYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
TY TL+YG C + + + M P + L+ L K K+++A ++V +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 288 IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMM 347
+ V PN+F+YN LID C + +A L M G+ P+ TY+I+I C +
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 348 DEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSK 402
D A+S M +K Y+ LI G A +AEM + + YTS
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 403 LDAICNDYNFDDEIEKFMR-YKETGGDA 429
+ C+ +I K +R Y E G
Sbjct: 479 MGGYCS----KGKINKALRLYHEMTGKG 502
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 131/285 (45%), Gaps = 8/285 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+ +L R A+S+ Q++ +G+ D+ +LI+ F +L ++
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
R +PD T+++ G+ + A D + +G VTY +IN LC+
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN----EVTYTAVINGLCKA 730
Query: 172 GETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKC-VSDAYDLYNEMLLKRISPDVFT 228
G A L +++ + + Y + + + + + A +L+N +LK + + T
Sbjct: 731 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNA-ILKGLLANTAT 789
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
YN LI GFC G++ +A M + + PD T +I+ LC+ VK+A + +M
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 289 KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHT 333
+ + P+ YNTLI G C+ +M KA L + M +G+ P+ T
Sbjct: 850 EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 158/317 (49%), Gaps = 7/317 (2%)
Query: 61 RMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTT 120
R++ +PT SL ++ I P T I+ + G+ + A + + + D
Sbjct: 103 RLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLA 162
Query: 121 ALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQL 180
+ T++ LC + + A ++ + F VD +VTY ++N C + T AL++
Sbjct: 163 SFNTILDVLCKSKRVEKAYELFRALRGR---FSVD--TVTYNVILNGWCLIKRTPKALEV 217
Query: 181 LRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA 238
L+++ E + ++ YNT++K + A++ + EM + DV TY T+++GF
Sbjct: 218 LKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGV 277
Query: 239 GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFI 298
G++++A F+ M E + P V+T + +I LCK+ V+ A + M++ EPNV
Sbjct: 278 AGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTT 337
Query: 299 YNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
YN LI G + ++ L M G P+ TYN+MI + + +++A+ LF M
Sbjct: 338 YNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMG 397
Query: 359 LKDIKPDAETYSILIEG 375
D P+ +TY+ILI G
Sbjct: 398 SGDCLPNLDTYNILISG 414
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 128/276 (46%), Gaps = 4/276 (1%)
Query: 160 TYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEM 217
T+ + G+ A++L + E D+ +NTI+ +C+ K V AY+L+
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RA 186
Query: 218 LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
L R S D TYN ++ G+C + KA+ M I P+++T + ++ + ++
Sbjct: 187 LRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQI 246
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIM 337
+ A M K E +V Y T++ G+ + ++ +AR + M GV P V TYN M
Sbjct: 247 RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAM 306
Query: 338 ISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
I LC + ++ A+ +F M + +P+ TY++LI G + + L+ M + G
Sbjct: 307 IQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGC 366
Query: 398 AYT-SKLDAICNDYNFDDEIEKFMRYKETGGDADFL 432
+ + Y+ E+EK + E G D L
Sbjct: 367 EPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL 402
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 6/222 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+N IL + P A+ + +++ +GI P++ T ++ F G++ +A+ ++
Sbjct: 198 YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMK 257
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
KR + D TT++ G + GEI+ A N D++ +G V TY +I LC+
Sbjct: 258 KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV----ATYNAMIQVLCKK 313
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
A+ + ++ +V YN +I+ + S +L M + P+ TY
Sbjct: 314 DNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTY 373
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
N +I + ++ KA+G F M + P++ T + LI +
Sbjct: 374 NMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 6/205 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+ M+ P +T +N +L R A +++ + D+ T T +++
Sbjct: 214 ALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH 273
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
F G + A +V ++++ P +++ LC + +A+ +++ +G++
Sbjct: 274 GFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEP 333
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDA 210
V TY LI L GE +L++++E E + Q YN +I+ E V A
Sbjct: 334 NV----TTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA 389
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYG 235
L+ +M P++ TYN LI G
Sbjct: 390 LGLFEKMGSGDCLPNLDTYNILISG 414
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 169/359 (47%), Gaps = 6/359 (1%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P +N I+ + V+ + + + ++ G+ + T T+L+ G+M+ A +
Sbjct: 257 PEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKL 316
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
++ +R + D T+L+ C G ++ A D++ KG S TY LI+
Sbjct: 317 FDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPS----SYTYGALID 372
Query: 167 ELCEVGETGAALQLLRQIEEEHTDVQ--MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
+C+VGE GAA L+ +++ + ++ ++NT+I C V +A +Y+ M K
Sbjct: 373 GVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQA 432
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
DVFT NT+ F + +A + M +K + LI CKE V++A +
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF 492
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
M V+PN YN +I YC ++ +AR L M G+ PD +TY +I C +
Sbjct: 493 VEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIA 552
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKL 403
+ +DEAM LF M LK + ++ TY+++I G A L EM G +K+
Sbjct: 553 DNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKV 611
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 5/231 (2%)
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
+++ M+ + V++ ++ G C G++ K+ ++ IKP+ T + +I+A
Sbjct: 210 EIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAY 269
Query: 272 CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV 331
K+R V+ M K V N Y L++ +M+ A L M RG+ DV
Sbjct: 270 VKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDV 329
Query: 332 HTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE 391
H Y +ISW C M A LF + K + P + TY LI+G + A L+ E
Sbjct: 330 HVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNE 389
Query: 392 MCSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHI 437
M S G + + + +D C D+ + ++ G AD + I
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 8/227 (3%)
Query: 49 ITQ--FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
ITQ FN ++ R A + +E KG D+ T + +CF L R + A
Sbjct: 397 ITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQW 456
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
L ++++ + T + T L+ C G + A ++ +KG Q ++TY +I
Sbjct: 457 LFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN----AITYNVMIY 512
Query: 167 ELCEVGETGAALQLLRQIEEEHTDVQ--MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
C+ G+ A +L +E D Y ++I C V +A L++EM LK +
Sbjct: 513 AYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQ 572
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
+ TY +I G G+ +A G ++ MK + D LI ++
Sbjct: 573 NSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 116/305 (38%), Gaps = 37/305 (12%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F + +P + ++ + ++ A L +++ KG+ LI+ +C
Sbjct: 352 FDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCR 411
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
G ++ A + + ++ +Q D T+ C N + +D+ K F+
Sbjct: 412 KGMVDEASMIYDVMEQKGFQADVFTCNTIAS--CFN-----RLKRYDEAKQWLFRMM--- 461
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNE 216
E G L + Y +I C++ V +A L+ E
Sbjct: 462 ----------------EGGVKLSTVS-----------YTNLIDVYCKEGNVEEAKRLFVE 494
Query: 217 MLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERK 276
M K + P+ TYN +IY +C G++++A M+ + PD T LIH C
Sbjct: 495 MSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADN 554
Query: 277 VKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNI 336
V +A + + M ++ N Y +I G + +A L M +G T D Y
Sbjct: 555 VDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTA 614
Query: 337 MISWL 341
+I +
Sbjct: 615 LIGSM 619
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 79/195 (40%), Gaps = 12/195 (6%)
Query: 236 FCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPN 295
+ G + + F+ M + + D +C + A K R++ + M+ + V+
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 296 VFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFH 355
V+ +++G C ++ K++ L + +G+ P+ +TYN +I+ +
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283
Query: 356 YMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDY 410
M + + TY++L+E + A L EM GI YTS + C
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 411 N-------FDDEIEK 418
N FD+ EK
Sbjct: 344 NMKRAFLLFDELTEK 358
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 178/374 (47%), Gaps = 17/374 (4%)
Query: 15 FMRYHSHSPRPFSHEAV-----------NAVSSFHNMLSMRPAPPITQFNNILGSLVRMN 63
+M P FS+ V +A+ F M AP +T +N ++ ++
Sbjct: 174 WMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEK 233
Query: 64 HYPTAVSLSQQL-ELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTAL 122
+ TA+ L +L E + P++ T I+I+ GR++ + ++ + + D
Sbjct: 234 DHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTY 293
Query: 123 TTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLR 182
++L+ GLC G + A + +++ + V VTY ++ C G+ +L+L R
Sbjct: 294 SSLIHGLCDAGNVDKAESVFNELDERKASIDV----VTYNTMLGGFCRCGKIKESLELWR 349
Query: 183 QIEEEHT-DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQ 241
+E +++ ++ YN +IK + E+ + +A ++ M K + D TY I+G C G
Sbjct: 350 IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGY 409
Query: 242 LRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNT 301
+ KA+G ++ DV +I LCK++++++A+++V M K VE N + N
Sbjct: 410 VNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNA 469
Query: 302 LIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKD 361
LI G +++ +A F M G P V +YNI+I LC + EA + M
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529
Query: 362 IKPDAETYSILIEG 375
KPD +TYSIL+ G
Sbjct: 530 WKPDLKTYSILLCG 543
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 192/460 (41%), Gaps = 73/460 (15%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P I +N +L + V + SL E G+AP++ T +LI C A
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQV------------ 154
L + K ++PD + +T++ L G++ A+ D++ +G V
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLK 231
Query: 155 -----------DRV----SV-----TYRFLINELCEVGETGAALQLLRQIE--EEHTDVQ 192
DR+ SV T+ +I+ L + G L++ +++ E D+
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291
Query: 193 MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
Y+++I +C+ V A ++NE+ ++ S DV TYNT++ GFC G++++++ + +M
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 253 K-----------------MENIK-----------------PDVSTCDPLIHALCKERKVK 278
+ +EN K D +T IH LC V
Sbjct: 352 EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVN 411
Query: 279 QANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMI 338
+A V+ + + +V+ Y ++ID C ++ +A L M+ GV + H N +I
Sbjct: 412 KALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALI 471
Query: 339 SWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI- 397
L + + EA M +P +Y+ILI G + A + EM NG
Sbjct: 472 GGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWK 531
Query: 398 ----AYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLI 433
Y+ L +C D D +E + ++ ++G + D ++
Sbjct: 532 PDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMM 571
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 171/363 (47%), Gaps = 12/363 (3%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+++++ L + A S+ +L+ + + D+ T ++ FC G++ + L +I+
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLE-LWRIM 351
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+ + + L+KGL NG+I A + AKG+ TY I+ LC
Sbjct: 352 EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAAD----KTTYGIFIHGLCVN 407
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
G AL +++++E H DV Y +II +C+ K + +A +L EM + +
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
N LI G +L +A F M +P V + + LI LCK K +A++ V M++
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
+P++ Y+ L+ G C ++ A L H G+ DV +NI+I LC+ +D+
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 350 AMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLD 404
AM++ M+ ++ + TY+ L+EG+ + A + M G I+Y + +
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 405 AIC 407
+C
Sbjct: 648 GLC 650
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 159/348 (45%), Gaps = 8/348 (2%)
Query: 31 VNAVSSFHNMLSMRPAP-PITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTI 89
V+ S N L R A + +N +LG R ++ L + +E K + +I + I
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNI 364
Query: 90 LINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKG 149
LI G+++ A + + + Y D T + GLC+NG + A+ +V++ G
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 150 FQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMY--NTIIKSMCEDKCV 207
V Y +I+ LC+ A L++++ + ++ + N +I + D +
Sbjct: 425 GHLDV----YAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 208 SDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPL 267
+A EM P V +YN LI G C G+ +A F M KPD+ T L
Sbjct: 481 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Query: 268 IHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGV 327
+ LC++RK+ A + +++ +E +V ++N LI G C + ++ A + M R
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Query: 328 TPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
T ++ TYN ++ + A ++ YM ++PD +Y+ +++G
Sbjct: 601 TANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKG 648
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 6/187 (3%)
Query: 258 KPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARF 317
+P + + + L++A + ++ + S+ A A V PN+ YN LI C + KAR
Sbjct: 111 EPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARG 170
Query: 318 LSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWL 377
M G PDV +Y+ +I+ L + +D+A+ LF M + + PD Y+ILI+G+L
Sbjct: 171 FLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFL 230
Query: 378 NLPHYMHAINLLAEMCSNGIAYTS------KLDAICNDYNFDDEIEKFMRYKETGGDADF 431
+ A+ L + + Y + + + DD ++ + R K+ + D
Sbjct: 231 KEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDL 290
Query: 432 LIASHIV 438
S ++
Sbjct: 291 YTYSSLI 297
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+ +H L + N ++ L + A+++ +E + ++ T L+
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
F +G N A + G + K QPD + T+MKGLC+ + A+ F DD + G
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Query: 153 QVDRVSVTYRFLIN 166
V ++ R ++N
Sbjct: 673 TVYTWNILVRAVVN 686
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 187/422 (44%), Gaps = 46/422 (10%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + +NN++ S + A+ + + KG++ +T LI +C G+ + A +
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 107 L-----------------------------------GKILKRAYQPDTTALTTLMKGLCL 131
L G++L R P LTTL+ GLC
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 132 NGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT-- 189
+G+ A+ KGF VD + T L++ LCE G+ A ++ ++I
Sbjct: 483 HGKHSKALELWFQFLNKGFV--VD--TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM 538
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
D YNT+I C K + +A+ +EM+ + + PD +TY+ LI G ++ +A+ F+
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
+ K + PDV T +I CK + ++ M+ +V+PN +YN LI YC
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 658
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
+++ A L M +G++P+ TY +I + + ++EA LF M ++ ++P+ Y
Sbjct: 659 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718
Query: 370 SILIEGWLNLPHYMHAINLLAEMCS-----NGIAYTSKLDAICNDYNFDDEIEKFMRYKE 424
+ LI+G+ L + LL EM S N I YT + D N + +E
Sbjct: 719 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778
Query: 425 TG 426
G
Sbjct: 779 KG 780
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 160/356 (44%), Gaps = 6/356 (1%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A+ ML +P ++ L + + A+ L Q KG D T L+
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ C G+++ AF + +IL R D + TL+ G C ++ A F D++ +G +
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSD 209
+ TY LI L + + A+Q + DV Y+ +I C+ + +
Sbjct: 573 PD----NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
+ ++EM+ K + P+ YN LI +C G+L A+ MK + I P+ +T LI
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
+ +V++A + M +EPNVF Y LIDGY + QM K L M ++ V P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHA 385
+ TY +MI + EA L + M K I PD+ TY I G+L + A
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 165/382 (43%), Gaps = 11/382 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
AV F M AP + FN ++ L Y A +++ +G+ P + T +IL+
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 338
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
R+ A+ VL ++ K+ + P+ L+ G + AI D + +KG
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCEDKCVSDA 210
S TY LI C+ G+ A +LL+++ +V + ++I +C A
Sbjct: 399 ----TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 454
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
EMLL+ +SP TLI G C G+ KA+ + + D T + L+H
Sbjct: 455 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
LC+ K+ +A + ++ + YNTLI G C ++ +A M RG+ PD
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
+TY+I+I L N ++EA+ + + PD TYS++I+G
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634
Query: 391 EMCS-----NGIAYTSKLDAIC 407
EM S N + Y + A C
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYC 656
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 177/434 (40%), Gaps = 47/434 (10%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P T N +L SLVR N + + + KG++PD+ T IN FC G++ A +
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
K+ + P+ T++ GL + G A F + + +G + + +TY L+
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL----ITYSILVK 338
Query: 167 ELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
L G A +L+++ ++ +V +YN +I S E ++ A ++ + M+ K +S
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 225 DVFTYNTLIYGFCAGGQ-----------------------------------LRKAVGFF 249
TYNTLI G+C GQ A+ F
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
M + N+ P LI LCK K +A + + + N L+ G C
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
++ +A + + RG D +YN +IS C +DEA M + +KPD TY
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKFMRYKE 424
SILI G N+ AI + NG+ Y+ +D C ++ E F
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 425 TGGDADFLIASHIV 438
+ ++ +H++
Sbjct: 639 KNVQPNTVVYNHLI 652
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 168/371 (45%), Gaps = 6/371 (1%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
+A NA MLS+ F +++ L + +A+ ++ L+ ++P LT
Sbjct: 415 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT 474
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
LI+ C G+ + A + + L + + DT L+ GLC G++ A ++ +
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKC 206
G +DRVS Y LI+ C + A L ++ + D Y+ +I +
Sbjct: 535 GCV--MDRVS--YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
V +A +++ + PDV+TY+ +I G C + + FF+ M +N++P+ +
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
LI A C+ ++ A + M + PN Y +LI G +I+++ +A+ L M G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
+ P+V Y +I M + L M K++ P+ TY+++I G+ + A
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 387 NLLAEMCSNGI 397
LL EM GI
Sbjct: 771 RLLNEMREKGI 781
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 16/262 (6%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P ++ ++ L MN A+ + G+ PD+ T +++I+ C R
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
+++ + QP+T L++ C +G + A+ +D+K KG + S TY LI
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG----ISPNSATYTSLIK 688
Query: 167 ELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
+ + A L ++ E +V Y +I + + L EM K + P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
+ TY +I G+ G + +A N M+ + I PD T I+ K+ V +A
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA---- 804
Query: 285 AAMIKASVEPNVFIYNTLIDGY 306
K S E N Y +I+G+
Sbjct: 805 ---FKGSDEEN---YAAIIEGW 820
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 187/422 (44%), Gaps = 46/422 (10%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + +NN++ S + A+ + + KG++ +T LI +C G+ + A +
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 107 L-----------------------------------GKILKRAYQPDTTALTTLMKGLCL 131
L G++L R P LTTL+ GLC
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 132 NGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT-- 189
+G+ A+ KGF VD + T L++ LCE G+ A ++ ++I
Sbjct: 483 HGKHSKALELWFQFLNKGFV--VD--TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM 538
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
D YNT+I C K + +A+ +EM+ + + PD +TY+ LI G ++ +A+ F+
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
+ K + PDV T +I CK + ++ M+ +V+PN +YN LI YC
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 658
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
+++ A L M +G++P+ TY +I + + ++EA LF M ++ ++P+ Y
Sbjct: 659 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718
Query: 370 SILIEGWLNLPHYMHAINLLAEMCS-----NGIAYTSKLDAICNDYNFDDEIEKFMRYKE 424
+ LI+G+ L + LL EM S N I YT + D N + +E
Sbjct: 719 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778
Query: 425 TG 426
G
Sbjct: 779 KG 780
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 160/356 (44%), Gaps = 6/356 (1%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A+ ML +P ++ L + + A+ L Q KG D T L+
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ C G+++ AF + +IL R D + TL+ G C ++ A F D++ +G +
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSD 209
+ TY LI L + + A+Q + DV Y+ +I C+ + +
Sbjct: 573 PD----NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
+ ++EM+ K + P+ YN LI +C G+L A+ MK + I P+ +T LI
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
+ +V++A + M +EPNVF Y LIDGY + QM K L M ++ V P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHA 385
+ TY +MI + EA L + M K I PD+ TY I G+L + A
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 165/382 (43%), Gaps = 11/382 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
AV F M AP + FN ++ L Y A +++ +G+ P + T +IL+
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 338
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
R+ A+ VL ++ K+ + P+ L+ G + AI D + +KG
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCEDKCVSDA 210
S TY LI C+ G+ A +LL+++ +V + ++I +C A
Sbjct: 399 ----TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 454
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
EMLL+ +SP TLI G C G+ KA+ + + D T + L+H
Sbjct: 455 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
LC+ K+ +A + ++ + YNTLI G C ++ +A M RG+ PD
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
+TY+I+I L N ++EA+ + + PD TYS++I+G
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634
Query: 391 EMCS-----NGIAYTSKLDAIC 407
EM S N + Y + A C
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYC 656
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 177/434 (40%), Gaps = 47/434 (10%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P T N +L SLVR N + + + KG++PD+ T IN FC G++ A +
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
K+ + P+ T++ GL + G A F + + +G + + +TY L+
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL----ITYSILVK 338
Query: 167 ELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
L G A +L+++ ++ +V +YN +I S E ++ A ++ + M+ K +S
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 225 DVFTYNTLIYGFCAGGQ-----------------------------------LRKAVGFF 249
TYNTLI G+C GQ A+ F
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
M + N+ P LI LCK K +A + + + N L+ G C
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
++ +A + + RG D +YN +IS C +DEA M + +KPD TY
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKFMRYKE 424
SILI G N+ AI + NG+ Y+ +D C ++ E F
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 425 TGGDADFLIASHIV 438
+ ++ +H++
Sbjct: 639 KNVQPNTVVYNHLI 652
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 168/371 (45%), Gaps = 6/371 (1%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
+A NA MLS+ F +++ L + +A+ ++ L+ ++P LT
Sbjct: 415 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT 474
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
LI+ C G+ + A + + L + + DT L+ GLC G++ A ++ +
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKC 206
G +DRVS Y LI+ C + A L ++ + D Y+ +I +
Sbjct: 535 GCV--MDRVS--YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
V +A +++ + PDV+TY+ +I G C + + FF+ M +N++P+ +
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
LI A C+ ++ A + M + PN Y +LI G +I+++ +A+ L M G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
+ P+V Y +I M + L M K++ P+ TY+++I G+ + A
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 387 NLLAEMCSNGI 397
LL EM GI
Sbjct: 771 RLLNEMREKGI 781
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 16/262 (6%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P ++ ++ L MN A+ + G+ PD+ T +++I+ C R
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
+++ + QP+T L++ C +G + A+ +D+K KG + S TY LI
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG----ISPNSATYTSLIK 688
Query: 167 ELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
+ + A L ++ E +V Y +I + + L EM K + P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
+ TY +I G+ G + +A N M+ + I PD T I+ K+ V +A
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA---- 804
Query: 285 AAMIKASVEPNVFIYNTLIDGY 306
K S E N Y +I+G+
Sbjct: 805 ---FKGSDEEN---YAAIIEGW 820
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 184/397 (46%), Gaps = 15/397 (3%)
Query: 41 LSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRM 100
L+ R P ++ +N ++ L + + Y A L +++ KGI+P++ + + LIN C+ G++
Sbjct: 238 LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Query: 101 NYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVT 160
AFS L ++LKR P+ L++L+KG L G A++ + + +GF Q + V+
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM-IRGFGLQPNVVA-- 354
Query: 161 YRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEML 218
Y L+ C G A+ + +EE +++ Y ++I + + A ++N+ML
Sbjct: 355 YNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKML 414
Query: 219 LKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVK 278
P+V Y ++ C + ++A +M EN P V T + I LC ++
Sbjct: 415 TSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLD 474
Query: 279 QANSVVAAMIKA-SVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIM 337
A V M + PN+ YN L+DG N++ +A L+ + RGV TYN +
Sbjct: 475 WAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTL 534
Query: 338 ISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG- 396
+ C + + A+ L M + PD T +++I + A +L ++ S G
Sbjct: 535 LHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCGR 593
Query: 397 -------IAYTSKLDAICNDYNFDDEIEKFMRYKETG 426
I+YT+ + +C +D + R G
Sbjct: 594 RKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAG 630
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 166/359 (46%), Gaps = 13/359 (3%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + +N +L +L + N A L ++ KG PD + T +I+ C +G +
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE---- 234
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
G+ L ++P + L+ GLC + + A ++ KG V ++Y LIN
Sbjct: 235 -GRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNV----ISYSTLIN 289
Query: 167 ELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLK-RIS 223
LC G+ A L Q+ + H ++ ++++K DA DL+N+M+ +
Sbjct: 290 VLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQ 349
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
P+V YNTL+ GFC+ G + KAV F+ M+ P++ T LI+ K + A +
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYI 409
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
M+ + PNV +Y +++ C ++ +A L M+ P V T+N I LC
Sbjct: 410 WNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCD 469
Query: 344 SNMMDEAMSLFHYMDLK-DIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTS 401
+ +D A +F M+ + P+ TY+ L++G A L E+ G+ ++S
Sbjct: 470 AGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSS 528
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 156/352 (44%), Gaps = 17/352 (4%)
Query: 71 LSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLC 130
L QQ++L+G +I+ + +G A + +I + P ++ L
Sbjct: 98 LLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLL 157
Query: 131 LNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT- 189
I+ + D+K GF+ V TY L+ LC+ + A +LL ++ +
Sbjct: 158 GENRIQMIYMVYRDMKRDGFEPNV----FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCC 213
Query: 190 -DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGF 248
D Y T+I SMCE V + + L +R P V YN LI G C + A
Sbjct: 214 PDAVSYTTVISSMCEVGLVKEGRE-----LAERFEPVVSVYNALINGLCKEHDYKGAFEL 268
Query: 249 FNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCL 308
M + I P+V + LI+ LC +++ A S + M+K PN++ ++L+ G L
Sbjct: 269 MREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFL 328
Query: 309 INQMTKARFLSHTMATR-GVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAE 367
A L + M G+ P+V YN ++ C+ + +A+S+F +M+ P+
Sbjct: 329 RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR 388
Query: 368 TYSILIEGW-----LNLPHYMHAINLLAEMCSNGIAYTSKLDAICNDYNFDD 414
TY LI G+ L+ Y+ L + C N + YT+ ++A+C F +
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKE 440
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 139/298 (46%), Gaps = 9/298 (3%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + +N ++ + AVS+ +E G +P+I T LIN F G ++ A +
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYI 409
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
K+L P+ T +++ LC + + + A + + + + V T+ I
Sbjct: 410 WNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP----TFNAFIK 465
Query: 167 ELCEVGETGAALQLLRQIEEEHT---DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
LC+ G A ++ RQ+E++H ++ YN ++ + + + +AY L E+ ++ +
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
TYNTL++G C G A+ M ++ PD T + +I A CK+ K ++A +
Sbjct: 526 WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585
Query: 284 V--AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMIS 339
+ + + P+V Y +I G C N L M + G+ P + T++++I+
Sbjct: 586 LDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 116/279 (41%), Gaps = 40/279 (14%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
AV ++ ML+ P + + N++ +L R + + A SL + + + AP + T I
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 93 CFCHLGRMNYAFSVLGKILKR-AYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
C GR+++A V ++ ++ P+ L+ GL I A ++ +G +
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAY 211
+ S TY L++ C G G ALQL+
Sbjct: 526 WS----SSTYNTLLHGSCNAGLPGIALQLV------------------------------ 551
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK--MENIKPDVSTCDPLIH 269
+M++ SPD T N +I +C G+ +A +++ +PDV + +I
Sbjct: 552 ---GKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIW 608
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCL 308
LC+ + ++ MI A + P++ ++ LI+ + L
Sbjct: 609 GLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFIL 647
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 19/271 (7%)
Query: 187 EHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLK--RISPDVFTYNTLIYGFCAGGQLRK 244
+HT + + +I+ + D V L +M L+ S D+F ++I + G +
Sbjct: 73 KHTPLT-FEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFI--SVISVYRQVGLAER 129
Query: 245 AVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLID 304
AV F +K P V + ++ L E +++ V M + EPNVF YN L+
Sbjct: 130 AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLK 189
Query: 305 GYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKP 364
C N++ A+ L M+ +G PD +Y +IS +C ++ E L + +P
Sbjct: 190 ALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEP 244
Query: 365 DAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKF 419
Y+ LI G Y A L+ EM G I+Y++ ++ +CN +
Sbjct: 245 VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFL 304
Query: 420 MRYKETGGDADFLIASHIV----LRNPSFKA 446
+ + G + S +V LR +F A
Sbjct: 305 TQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 151/297 (50%), Gaps = 10/297 (3%)
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
V ++++R QP+ ++ LC G++ A + +D+K G V V+Y LI
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNV----VSYNTLI 265
Query: 166 NELCEVGETGA---ALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLK 220
+ C++G G A +L+++ E ++ +N +I +D + + ++ EML +
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 221 RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQA 280
+ P+V +YN+LI G C GG++ +A+ + M ++P++ T + LI+ CK +K+A
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 281 NSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISW 340
+ ++ P +YN LID YC + ++ L M G+ PDV TYN +I+
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
LC + ++ A LF + K + PD T+ IL+EG+ A LL EM G+
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 160/336 (47%), Gaps = 13/336 (3%)
Query: 46 APPITQFNNILGSLVRMNH----YPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMN 101
+P + +N ++ ++ Y L + +E ++P++ T ILI+ F +
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE-NDVSPNLTTFNILIDGFWKDDNLP 313
Query: 102 YAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTY 161
+ V ++L + +P+ + +L+ GLC G+I AI+ D + + G Q + +TY
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNL----ITY 369
Query: 162 RFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLL 219
LIN C+ AL + ++ + +MYN +I + C+ + D + L EM
Sbjct: 370 NALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
Query: 220 KRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQ 279
+ I PDV TYN LI G C G + A F+ + + + PD+ T L+ C++ + ++
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRK 488
Query: 280 ANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMAT-RGVTPDVHTYNIMI 338
A ++ M K ++P YN ++ GYC + A + M R + +V +YN+++
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548
Query: 339 SWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIE 374
+++A L + M K + P+ TY I+ E
Sbjct: 549 QGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKE 584
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 151/308 (49%), Gaps = 8/308 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A + M+ +P +T FN ++ + ++ P ++ + +++ + + P++ + LIN
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN 339
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C+ G+++ A S+ K++ QP+ L+ G C N ++ A++ VK +G
Sbjct: 340 GLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG--- 396
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDA 210
+ Y LI+ C++G+ L ++E E DV YN +I +C + + A
Sbjct: 397 -AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
L++++ K + PD+ T++ L+ G+C G+ RKA M +KP T + ++
Sbjct: 456 KKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514
Query: 271 LCKERKVKQANSVVAAMIKA-SVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
CKE +K A ++ M K + NV YN L+ GY ++ A L + M +G+ P
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574
Query: 330 DVHTYNIM 337
+ TY I+
Sbjct: 575 NRITYEIV 582
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 128/304 (42%), Gaps = 24/304 (7%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F ML P + +N+++ L A+S+ ++ G+ P++ T LIN FC
Sbjct: 319 FKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCK 378
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
+ A + G + + P T L+ C G+I ++++ +G V
Sbjct: 379 NDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVG- 437
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEEH-TDVQMYNTIIKSMCEDKCVSDAYDLYN 215
TY LI LC G AA +L Q+ + D+ ++ +++ C A L
Sbjct: 438 ---TYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLK 494
Query: 216 EMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME-NIKPDVSTCDPLIHALCKE 274
EM + P TYN ++ G+C G L+ A M+ E ++ +V++ + L+ ++
Sbjct: 495 EMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQK 554
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV--H 332
K++ AN ++ M++ + PN Y + M +G PD+ H
Sbjct: 555 GKLEDANMLLNEMLEKGLVPNRITY----------------EIVKEEMVDQGFVPDIEGH 598
Query: 333 TYNI 336
+N+
Sbjct: 599 LFNV 602
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 116/251 (46%), Gaps = 13/251 (5%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+S M+S P + +N ++ + + A+ + ++ +G P +LI+
Sbjct: 350 AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLID 409
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
+C LG+++ F++ ++ + PD L+ GLC NG I +A D + +KG
Sbjct: 410 AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPD 469
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQ--MYNTIIKSMCEDKCVSDA 210
VT+ L+ C GE+ A LL+++ + + YN ++K C++ + A
Sbjct: 470 L-----VTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Query: 211 YDLYNEM-LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
++ +M +R+ +V +YN L+ G+ G+L A N M + + P+ T +
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT-----Y 579
Query: 270 ALCKERKVKQA 280
+ KE V Q
Sbjct: 580 EIVKEEMVDQG 590
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 83/162 (51%), Gaps = 8/162 (4%)
Query: 263 TCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTM 322
+C PL+ AL KE + V MI+ ++PNVF +N +I+ C +M KAR + M
Sbjct: 190 SCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM 249
Query: 323 ATRGVTPDVHTYNIMISWLCT---SNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWL-- 377
G +P+V +YN +I C + M +A ++ M D+ P+ T++ILI+G+
Sbjct: 250 KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKD 309
Query: 378 -NLPHYMHAIN--LLAEMCSNGIAYTSKLDAICNDYNFDDEI 416
NLP M L ++ N I+Y S ++ +CN + I
Sbjct: 310 DNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 168/382 (43%), Gaps = 46/382 (12%)
Query: 34 VSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINC 93
++ F N+L P + + + V+++ + L +++ I P + +LI+
Sbjct: 164 INVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDG 223
Query: 94 FCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQ 153
C RMN A + ++L R P
Sbjct: 224 LCKGKRMNDAEQLFDEMLARRLLPSL---------------------------------- 249
Query: 154 VDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCEDKCVSDAY 211
+TY LI+ C+ G + ++ +++ +H + + +NT++K + + V DA
Sbjct: 250 -----ITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
++ EM PD FT++ L G+ + + A+G + +K + TC L++AL
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 272 CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV 331
CKE K+++A ++ + + PN IYNT+IDGYC + AR M +G+ PD
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 332 HTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE 391
YN +I C M+ A + M LK + P ETY+ILI G+ + ++L E
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKE 484
Query: 392 MCSNG-----IAYTSKLDAICN 408
M NG ++Y + ++ +C
Sbjct: 485 MEDNGTMPNVVSYGTLINCLCK 506
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 174/368 (47%), Gaps = 10/368 (2%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
V A M P +N ++ + A +++LKG++P + T IL
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
I + + F +L ++ P+ + TL+ LC ++ A D++ +G
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCEDKCVS 208
+V R+ Y LI+ C G+ A + +++ ++ ++ + YNT+I + +S
Sbjct: 526 SPKV-RI---YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLS 581
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
+A DL E+ K + PDVFTYN+LI G+ G +++ + + MK IKP + T LI
Sbjct: 582 EAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
+LC + ++ + M S++P++ +YN ++ Y + M KA L M + +
Sbjct: 642 -SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIG 697
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINL 388
D TYN +I + E SL M+ ++++P+A+TY+I+++G + YM A
Sbjct: 698 LDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVW 757
Query: 389 LAEMCSNG 396
EM G
Sbjct: 758 YREMQEKG 765
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 165/379 (43%), Gaps = 9/379 (2%)
Query: 29 EAVNAVSSFHNMLSMRP---APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIA 85
+A N SF M+ P + FN +L L + A ++ ++++ G PD
Sbjct: 261 KAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAF 320
Query: 86 TLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDV 145
T +IL + + + A V + + + + L+ LC G+I A
Sbjct: 321 TFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGRE 380
Query: 146 KAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCE 203
AKG V Y +I+ C G+ A + +E++ D YN +I+ CE
Sbjct: 381 MAKGLVPN----EVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 204 DKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVST 263
+ +A N+M LK +SP V TYN LI G+ + K M+ P+V +
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496
Query: 264 CDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMA 323
LI+ LCK K+ +A V M V P V IYN LIDG C ++ A S M
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556
Query: 324 TRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYM 383
+G+ ++ TYN +I L + + EA L + K +KPD TY+ LI G+ +
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ 616
Query: 384 HAINLLAEMCSNGIAYTSK 402
I L EM +GI T K
Sbjct: 617 RCIALYEEMKRSGIKPTLK 635
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 147/311 (47%), Gaps = 13/311 (4%)
Query: 65 YPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTT 124
Y TAV G+ + T +IL+N C G++ A +LG+ + + P+ T
Sbjct: 342 YETAVD-------SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 125 LMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQI 184
++ G C G++ A + ++ +G + + Y LI CE+GE A + + ++
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPD----HLAYNCLIRRFCELGEMENAEKEVNKM 450
Query: 185 EEEHTD--VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQL 242
+ + V+ YN +I +D+ EM P+V +Y TLI C G +L
Sbjct: 451 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510
Query: 243 RKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTL 302
+A M+ + P V + LI C + K++ A M+K +E N+ YNTL
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTL 570
Query: 303 IDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDI 362
IDG + ++++A L ++ +G+ PDV TYN +IS + + ++L+ M I
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Query: 363 KPDAETYSILI 373
KP +TY +LI
Sbjct: 631 KPTLKTYHLLI 641
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 175/419 (41%), Gaps = 33/419 (7%)
Query: 12 PSLFMRYHSHSPRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSL 71
PS FM + + + F+ M R P + +N ++ L + A L
Sbjct: 177 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQL 236
Query: 72 SQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCL 131
++ + + P + T LI+ +C G +F V ++ +P TL+KGL
Sbjct: 237 FDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFK 296
Query: 132 NGEIRSAINFHDDVKAKGF---------------------------QFQVDRV----SVT 160
G + A N ++K GF + VD + T
Sbjct: 297 AGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYT 356
Query: 161 YRFLINELCEVGETGAALQLL-RQIEEEHTDVQ-MYNTIIKSMCEDKCVSDAYDLYNEML 218
L+N LC+ G+ A ++L R++ + + +YNT+I C + A M
Sbjct: 357 CSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAME 416
Query: 219 LKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVK 278
+ + PD YN LI FC G++ A N MK++ + P V T + LI ++ +
Sbjct: 417 KQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 476
Query: 279 QANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMI 338
+ ++ M PNV Y TLI+ C +++ +A+ + M RGV+P V YN++I
Sbjct: 477 KCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Query: 339 SWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
C+ +++A M K I+ + TY+ LI+G A +LL E+ G+
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 160/346 (46%), Gaps = 10/346 (2%)
Query: 55 ILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRA 114
+L +L + A + + KG+ P+ +I+ +C G + A + + K+
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 115 YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGET 174
+PD A L++ C GE+ +A + +K KG V+ TY LI E
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE----TYNILIGGYGRKYEF 475
Query: 175 GAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL 232
+L+++E+ T +V Y T+I +C+ + +A + +M + +SP V YN L
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 233 IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASV 292
I G C+ G++ A F M + I+ ++ T + LI L K+ +A ++ + + +
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Query: 293 EPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMS 352
+P+VF YN+LI GY + + L M G+ P + TY+++IS LCT ++
Sbjct: 596 KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTER 654
Query: 353 LFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA 398
LF M L KPD Y+ ++ + A NL +M I
Sbjct: 655 LFGEMSL---KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIG 697
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 129/262 (49%), Gaps = 6/262 (2%)
Query: 117 PDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGA 176
P + +LT L+ L + R IN ++ F+ Y I ++ + G
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS----KFMYGKAIQAAVKLSDVGK 197
Query: 177 ALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIY 234
L+L +++ + + V +YN +I +C+ K ++DA L++EML +R+ P + TYNTLI
Sbjct: 198 GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLID 257
Query: 235 GFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEP 294
G+C G K+ MK ++I+P + T + L+ L K V+ A +V+ M P
Sbjct: 258 GYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP 317
Query: 295 NVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLF 354
+ F ++ L DGY + A + T GV + +T +I+++ LC +++A +
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
Query: 355 HYMDLKDIKPDAETYSILIEGW 376
K + P+ Y+ +I+G+
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGY 399
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 138/349 (39%), Gaps = 43/349 (12%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
E NA + M +P + +N ++G R + + +++E G P++ +
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYG 498
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
LINC C ++ A V + R P L+ G C G+I A F ++ K
Sbjct: 499 TLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK 558
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIK------- 199
G + + VTY LI+ L G+ A LL +I + DV YN++I
Sbjct: 559 GIELNL----VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 200 ---------------------------SMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL 232
S+C + + L+ EM LK PD+ YN +
Sbjct: 615 VQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLK---PDLLVYNGV 671
Query: 233 IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASV 292
++ + G + KA M ++I D +T + LI K K+ + S++ M +
Sbjct: 672 LHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREM 731
Query: 293 EPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
EP YN ++ G+C + A M +G DV N ++S L
Sbjct: 732 EPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 5/230 (2%)
Query: 203 EDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVS 262
E K +S+A DL+ + + I P + L+ Q R + F + + +P
Sbjct: 121 ESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKF 180
Query: 263 TCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTM 322
I A K V + + M + P+VFIYN LIDG C +M A L M
Sbjct: 181 MYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM 240
Query: 323 ATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHY 382
R + P + TYN +I C + +++ + M I+P T++ L++G
Sbjct: 241 LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMV 300
Query: 383 MHAINLLAEMCSNGI---AYTSKLDAICNDYNFDDEIEKFMRYKETGGDA 429
A N+L EM G A+T + + Y+ +++ E + ET D+
Sbjct: 301 EDAENVLKEMKDLGFVPDAFT--FSILFDGYSSNEKAEAALGVYETAVDS 348
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 114/275 (41%), Gaps = 37/275 (13%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
+P + +N ++ A S+++ KGI ++ T LI+ G+++ A
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+L +I ++ +PD +L+ G G ++ I ++++K G + + TY LI
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLK----TYHLLI 641
Query: 166 N-------ELCEV------------------------GETGAALQLLRQIEEEHT--DVQ 192
+ EL E G+ A L +Q+ E+ D
Sbjct: 642 SLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKT 701
Query: 193 MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
YN++I + + + L +EM + + P+ TYN ++ G C A ++ M
Sbjct: 702 TYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREM 761
Query: 253 KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
+ + DV + L+ L +E + K+A V++ M
Sbjct: 762 QEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 68/150 (45%)
Query: 227 FTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAA 286
F+Y L + +A F ++ E I P + L+ L K ++ + +V
Sbjct: 110 FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNM 346
++++ P+ F+Y I ++ + K L + M + P V YN++I LC
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229
Query: 347 MDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
M++A LF M + + P TY+ LI+G+
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 169/388 (43%), Gaps = 12/388 (3%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + N ILGS+V+ + S +++ + I PD+AT ILIN C G + +
Sbjct: 196 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 255
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
+ K+ K Y P T++ C G ++AI D +K+KG VD TY LI+
Sbjct: 256 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG----VDADVCTYNMLIH 311
Query: 167 ELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
+LC LLR + + H + YNT+I + V A L NEML +SP
Sbjct: 312 DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSP 371
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
+ T+N LI G + G ++A+ F +M+ + + P + L+ LCK + A
Sbjct: 372 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY 431
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
M + V Y +IDG C + +A L + M+ G+ PD+ TY+ +I+ C
Sbjct: 432 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 491
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAY 399
A + + + P+ YS LI + AI + M G +
Sbjct: 492 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 551
Query: 400 TSKLDAICNDYNFDDEIEKFMRYKETGG 427
+ ++C E E+FMR + G
Sbjct: 552 NVLVTSLCKAGKV-AEAEEFMRCMTSDG 578
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 169/384 (44%), Gaps = 14/384 (3%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
AP I +N +L + + A+ L ++ KG+ D+ T +LI+ C R+ +
Sbjct: 265 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 324
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+L + KR P+ TL+ G G++ A +++ F + VT+ LI
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM----LSFGLSPNHVTFNALI 380
Query: 166 NELCEVGETGAALQLLRQIEEEH---TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRI 222
+ G AL++ +E + ++V Y ++ +C++ A Y M +
Sbjct: 381 DGHISEGNFKEALKMFYMMEAKGLTPSEVS-YGVLLDGLCKNAEFDLARGFYMRMKRNGV 439
Query: 223 SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS 282
TY +I G C G L +AV N M + I PD+ T LI+ CK + K A
Sbjct: 440 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 499
Query: 283 VVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC 342
+V + + + PN IY+TLI C + + +A + M G T D T+N++++ LC
Sbjct: 500 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 559
Query: 343 TSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----I 397
+ + EA M I P+ ++ LI G+ N + A ++ EM G
Sbjct: 560 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 619
Query: 398 AYTSKLDAICNDYNFDDEIEKFMR 421
Y S L +C + E EKF++
Sbjct: 620 TYGSLLKGLCKGGHL-REAEKFLK 642
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 174/386 (45%), Gaps = 8/386 (2%)
Query: 26 FSHEAVNAVSS--FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPD 83
FS+E ++S + MLS +P FN ++ + ++ A+ + +E KG+ P
Sbjct: 348 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 407
Query: 84 IATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHD 143
+ +L++ C + A ++ + T ++ GLC NG + A+ +
Sbjct: 408 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 467
Query: 144 DVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQ--MYNTIIKSM 201
++ G +D VTY LIN C+VG A +++ +I +Y+T+I +
Sbjct: 468 EMSKDG----IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 523
Query: 202 CEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDV 261
C C+ +A +Y M+L+ + D FT+N L+ C G++ +A F M + I P+
Sbjct: 524 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583
Query: 262 STCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHT 321
+ D LI+ + +A SV M K P F Y +L+ G C + +A +
Sbjct: 584 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643
Query: 322 MATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPH 381
+ D YN +++ +C S + +A+SLF M + I PD+ TY+ LI G
Sbjct: 644 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703
Query: 382 YMHAINLLAEMCSNGIAYTSKLDAIC 407
+ AI E + G +K+ C
Sbjct: 704 TVIAILFAKEAEARGNVLPNKVMYTC 729
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 153/355 (43%), Gaps = 11/355 (3%)
Query: 60 VRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDT 119
+R ++ + + + L G P + T ++ G +S L ++LKR PD
Sbjct: 174 LREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDV 233
Query: 120 TALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQ 179
L+ LC G + ++ G+ + VTY +++ C+ G AA++
Sbjct: 234 ATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI----VTYNTVLHWYCKKGRFKAAIE 289
Query: 180 LLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFC 237
LL ++ + DV YN +I +C ++ Y L +M + I P+ TYNTLI GF
Sbjct: 290 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 349
Query: 238 AGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVF 297
G++ A N M + P+ T + LI E K+A + M + P+
Sbjct: 350 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 409
Query: 298 IYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYM 357
Y L+DG C + AR M GV TY MI LC + +DEA+ L + M
Sbjct: 410 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469
Query: 358 DLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE-----MCSNGIAYTSKLDAIC 407
I PD TYS LI G+ + + A ++ + NGI Y++ + C
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 164/373 (43%), Gaps = 5/373 (1%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S E + A S F M + P + ++L L + H A + L A D
Sbjct: 596 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 655
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
L+ C G + A S+ G++++R+ PD+ T+L+ GLC G+ AI F + +
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 715
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE-EHT-DVQMYNTIIKSMCED 204
A+G V V Y ++ + + G+ A + Q++ HT D+ N +I
Sbjct: 716 ARG---NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 772
Query: 205 KCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTC 264
+ DL EM + P++ TYN L++G+ + + + + + I PD TC
Sbjct: 773 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 832
Query: 265 DPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMAT 324
L+ +C+ ++ ++ A I VE + + +N LI C ++ A L M +
Sbjct: 833 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 892
Query: 325 RGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMH 384
G++ D T + M+S L ++ E+ + H M + I P++ Y LI G +
Sbjct: 893 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 952
Query: 385 AINLLAEMCSNGI 397
A + EM ++ I
Sbjct: 953 AFVVKEEMIAHKI 965
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 135/282 (47%), Gaps = 7/282 (2%)
Query: 164 LINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKR 221
++ + + GE + L+++ + DV +N +I +C + + L +M
Sbjct: 204 ILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSG 263
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
+P + TYNT+++ +C G+ + A+ + MK + + DV T + LIH LC+ ++ +
Sbjct: 264 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY 323
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
++ M K + PN YNTLI+G+ ++ A L + M + G++P+ T+N +I
Sbjct: 324 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 383
Query: 342 CTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG----- 396
+ EA+ +F+ M+ K + P +Y +L++G + A M NG
Sbjct: 384 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 443
Query: 397 IAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
I YT +D +C + D+ + + G D D + S ++
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 485
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 5/244 (2%)
Query: 188 HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVG 247
+++ +Y+ +I+ + + D+ +++ M L +P V+T N ++ G+
Sbjct: 160 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 248 FFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC 307
F M I PDV+T + LI+ LC E ++++ ++ M K+ P + YNT++ YC
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
Query: 308 LINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAE 367
+ A L M ++GV DV TYN++I LC SN + + L M + I P+
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 368 TYSILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLDAICNDYNFDDEIEKFMRY 422
TY+ LI G+ N + A LL EM S G++ + + +D ++ NF + ++ F
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 423 KETG 426
+ G
Sbjct: 400 EAKG 403
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 140/333 (42%), Gaps = 6/333 (1%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P I N ++ RM L ++ + P++ T IL++ + ++ +F +
Sbjct: 757 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 816
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
I+ PD +L+ G+C + + + +G + VDR T+ LI+
Sbjct: 817 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVE--VDRY--TFNMLIS 872
Query: 167 ELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
+ C GE A L++ + D + ++ + + ++ + +EM + ISP
Sbjct: 873 KCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISP 932
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
+ Y LI G C G ++ A M I P ++ AL K K +A ++
Sbjct: 933 ESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLL 992
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
M+K + P + + TL+ C + +A L M+ G+ D+ +YN++I+ LC
Sbjct: 993 RFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAK 1052
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWL 377
M A L+ M +A TY LI G L
Sbjct: 1053 GDMALAFELYEEMKGDGFLANATTYKALIRGLL 1085
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 179/389 (46%), Gaps = 17/389 (4%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P I +N I+G ++ A + ++L+LKG P + T +IN FC G + +
Sbjct: 238 PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRL 297
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVS--VTYRFL 164
L ++ +R + L + ++ + R D ++ G+ D TY L
Sbjct: 298 LSEVKERGLRVSVWFLNNI-----IDAKYRHGYKV-DPAESIGWIIANDCKPDVATYNIL 351
Query: 165 INELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRI 222
IN LC+ G+ A+ L + ++ + Y +I++ C+ K A L +M +
Sbjct: 352 INRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC 411
Query: 223 SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS 282
PD+ TY LI+G G + AV + + PD + + L+ LCK + A
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471
Query: 283 VVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC 342
+ + M+ ++ P+ ++Y TLIDG+ +AR + +GV DV +N MI C
Sbjct: 472 LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531
Query: 343 TSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----I 397
S M+DEA++ + M+ + + PD TYS +I+G++ AI + M N +
Sbjct: 532 RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVV 591
Query: 398 AYTSKLDAIC--NDYNFDDEIEKFMRYKE 424
YTS ++ C D+ +E K M+ ++
Sbjct: 592 TYTSLINGFCCQGDFKMAEETFKEMQLRD 620
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 135/294 (45%), Gaps = 6/294 (2%)
Query: 82 PDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINF 141
PD+AT ILIN C G+ A L + K+ P+ + L++ C + E A
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 142 HDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIK 199
+ +G + + VTY LI+ L G A+ + ++ + D +YN ++
Sbjct: 403 LLQMAERGCKPDI----VTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Query: 200 SMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKP 259
+C+ A L++EML + I PD + Y TLI GF G +A F++ + +K
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 260 DVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLS 319
DV + +I C+ + +A + + M + + P+ F Y+T+IDGY M A +
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 320 HTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
M P+V TY +I+ C A F M L+D+ P+ TY+ LI
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 177/422 (41%), Gaps = 63/422 (14%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSL----VRMNH---------YPTAVSLSQQLE--- 76
A SSF +L+ + ++LG+L V++ H Y + SLS+ +E
Sbjct: 101 ACSSFLKLLARYRI--FNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYD 158
Query: 77 ----LKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLN 132
L PD+ L++ R+ A V ++ R D + L+KG+C
Sbjct: 159 YVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNE 218
Query: 133 -----------------------------------GEIRSAINFHDDVKAKGFQFQVDRV 157
G+I +A ++K KGF ++
Sbjct: 219 GKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLE-- 276
Query: 158 SVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMY--NTIIKSMCEDKCVSDAYDLYN 215
T+ +IN C+ G+ A+ +LL +++E V ++ N II + D +
Sbjct: 277 --TFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIG 334
Query: 216 EMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKER 275
++ PDV TYN LI C G+ AVGF + + + P+ + PLI A CK +
Sbjct: 335 WIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSK 394
Query: 276 KVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYN 335
+ A+ ++ M + +P++ Y LI G + M A + + RGV+PD YN
Sbjct: 395 EYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYN 454
Query: 336 IMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSN 395
+++S LC + A LF M ++I PDA Y+ LI+G++ + A + +
Sbjct: 455 MLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEK 514
Query: 396 GI 397
G+
Sbjct: 515 GV 516
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 150/350 (42%), Gaps = 27/350 (7%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P I + ++ LV H AV++ +L +G++PD A +L++ C GR A +
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
++L R PD TL+ G +G+ A KG + V V + +I
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDV----VHHNAMIK 528
Query: 167 ELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
C G AL + ++ EEH D Y+TII + + ++ A ++ M + P
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERK-VKQANSV 283
+V TY +LI GFC G + A F M++ ++ P+V T LI +L KE +++A
Sbjct: 589 NVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYY 648
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLS-----------------HTMATRG 326
M+ PN +N L+ G+ + T + L+ H M + G
Sbjct: 649 WELMMTNKCVPNEVTFNCLLQGFV---KKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDG 705
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
+ YN + LC M+ A M K PD +++ ++ G+
Sbjct: 706 WSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 144/351 (41%), Gaps = 24/351 (6%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F ML P + ++ +R + A + KG+ D+ +I FC
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
G ++ A + + ++ + PD +T++ G ++ +AI ++ + V
Sbjct: 533 SGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNV-- 590
Query: 157 VSVTYRFLINELCEVGETGAALQLLR--QIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLY 214
VTY LIN C G+ A + + Q+ + +V Y T+I+S+ ++ + Y
Sbjct: 591 --VTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYY 648
Query: 215 NE-MLLKRISPDVFTYNTLIYGFC---AGGQLRKAVG-----------FFNVMKMENIKP 259
E M+ + P+ T+N L+ GF +G L + G FF+ MK +
Sbjct: 649 WELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSD 708
Query: 260 DVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLS 319
+ + + LC VK A M+K P+ + ++ G+C++ + R +
Sbjct: 709 HAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMD 768
Query: 320 H-TMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLK-DIKPDAET 368
+ +G+ V Y+ ++ ++ EA ++ H M K D K E+
Sbjct: 769 FCNLGEKGLEVAVR-YSQVLEQHLPQPVICEASTILHAMVEKADTKEPVES 818
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 166/370 (44%), Gaps = 11/370 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+ F M + P + ++ L + AV L +++ +G +P +LI+
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDD-VKAKGFQ 151
C G + ++ + + P+ TL+ GLCL G++ A++ + V +K
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIP 325
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSD 209
V TY LIN L + A++LL +EE H + +Y+ +I + ++ +
Sbjct: 326 NDV-----TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEE 380
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A L+ +M K P++ Y+ L+ G C G+ +A N M P+ T L+
Sbjct: 381 AMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMK 440
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
K ++A V M K N F Y+ LIDG C + ++ +A + M T G+ P
Sbjct: 441 GFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKP 500
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKD---IKPDAETYSILIEGWLNLPHYMHAI 386
D Y+ +I LC MD A+ L+H M ++ +PD TY+IL++G A+
Sbjct: 501 DTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAV 560
Query: 387 NLLAEMCSNG 396
+LL M G
Sbjct: 561 DLLNSMLDRG 570
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 180/404 (44%), Gaps = 26/404 (6%)
Query: 27 SHEAVNAVSSFHNML-SMRPAPPITQFNNILGSLVRMNHYPTAVS-----LSQQLELKGI 80
+H AV FH M+ R + FN++L ++ Y + ++ + + I
Sbjct: 125 AHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNM-NI 183
Query: 81 APDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAIN 140
+P+ + ++I C L ++ A V + +R PD TLM GLC I A+
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243
Query: 141 FHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQ------IEEEHTDVQMY 194
D+++++G V Y LI+ LC+ G+ +L+ + E T Y
Sbjct: 244 LLDEMQSEGCSPS----PVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVT----Y 295
Query: 195 NTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKM 254
NT+I +C + A L M+ + P+ TY TLI G + AV + M+
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
Query: 255 ENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTK 314
+ LI L KE K ++A S+ M + +PN+ +Y+ L+DG C + +
Sbjct: 356 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNE 415
Query: 315 ARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIE 374
A+ + + M G P+ +TY+ ++ + + +EA+ ++ MD + YS+LI+
Sbjct: 416 AKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLID 475
Query: 375 GWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFD 413
G + A+ + ++M + GI AY+S + +C + D
Sbjct: 476 GLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 151/329 (45%), Gaps = 11/329 (3%)
Query: 45 PAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAF 104
P+P I +N ++ L + L + LKG P+ T LI+ C G+++ A
Sbjct: 255 PSPVI--YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAV 312
Query: 105 SVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFL 164
S+L +++ P+ TL+ GL A+ ++ +G+ Y L
Sbjct: 313 SLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH----IYSVL 368
Query: 165 INELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRI 222
I+ L + G+ A+ L R++ E+ ++ +Y+ ++ +C + ++A ++ N M+
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 223 SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS 282
P+ +TY++L+ GF G +AV + M + LI LC +VK+A
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMM 488
Query: 283 VVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATR---GVTPDVHTYNIMIS 339
V + M+ ++P+ Y+++I G C I M A L H M + PDV TYNI++
Sbjct: 489 VWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLD 548
Query: 340 WLCTSNMMDEAMSLFHYMDLKDIKPDAET 368
LC + A+ L + M + PD T
Sbjct: 549 GLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 124/302 (41%), Gaps = 54/302 (17%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
++ ++ L + A+SL +++ KG P+I ++L++ C G+ N A +L +++
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKG-----FQFQV--------DRV- 157
P+ ++LMKG G A+ ++ G F + V RV
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 158 -----------------SVTYRFLINELCEVGETGAALQLLRQI--EEE---HTDVQMYN 195
+V Y +I LC +G AAL+L ++ +EE DV YN
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 196 TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM--K 253
++ +C K +S A DL N ML + PDV T NT F N + K
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNT----------------FLNTLSEK 588
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
+ S + L+ L K ++V A ++V M+ + P + ++ C ++
Sbjct: 589 SNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKIN 648
Query: 314 KA 315
A
Sbjct: 649 AA 650
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 163/348 (46%), Gaps = 7/348 (2%)
Query: 53 NNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILK 112
N IL L + A L ++E +GI P++ + ++ C M+ A V IL+
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 113 RAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVG 172
+ +P+ + L+ G N + ++A+ + + + + V Y+ +IN LC+VG
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVN----GVVYQTIINGLCKVG 562
Query: 173 ETGAALQLLRQIEEEH---TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
+T A +LL + EE YN+II ++ + A Y EM ISP+V TY
Sbjct: 563 QTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITY 622
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
+L+ G C ++ +A+ + MK + +K D+ LI CK ++ A+++ + +++
Sbjct: 623 TSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLE 682
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
+ P+ IYN+LI G+ + M A L M G+ D+ TY +I L +
Sbjct: 683 EGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLIL 742
Query: 350 AMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
A L+ M + PD Y++++ G ++ + + EM N +
Sbjct: 743 ASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 181/419 (43%), Gaps = 48/419 (11%)
Query: 63 NHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTAL 122
N +A+ L ++E +G +P+ T ++LI F G M A K+ P +
Sbjct: 353 NDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHV 412
Query: 123 TTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLR 182
T+++G + A+ D+ F+ + V V L + LC+ G+T A +LL
Sbjct: 413 HTIIQGWLKGQKHEEALKLFDE----SFETGLANVFVCNTIL-SWLCKQGKTDEATELLS 467
Query: 183 QIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGG 240
++E +V YN ++ C K + A +++ +L K + P+ +TY+ LI G
Sbjct: 468 KMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNH 527
Query: 241 QLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKA---------- 290
+ A+ N M NI+ + +I+ LCK + +A ++A MI+
Sbjct: 528 DEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSY 587
Query: 291 --------------------------SVEPNVFIYNTLIDGYCLINQMTKARFLSHTMAT 324
+ PNV Y +L++G C N+M +A + M
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN 647
Query: 325 RGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMH 384
+GV D+ Y +I C + M+ A +LF + + + P Y+ LI G+ NL + +
Sbjct: 648 KGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVA 707
Query: 385 AINLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
A++L +M +G+ YT+ +D + D N E + + G D +I + IV
Sbjct: 708 ALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 153/342 (44%), Gaps = 7/342 (2%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F N+L P ++ ++ R + A+ + + I + +IN C
Sbjct: 501 FSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 97 LGRMNYAFSVLGKILK-RAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVD 155
+G+ + A +L +++ + + +++ G GE+ SA+ ++++ G V
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNV- 619
Query: 156 RVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDL 213
+TY L+N LC+ AL++ +++ + D+ Y +I C+ + A L
Sbjct: 620 ---ITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASAL 676
Query: 214 YNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCK 273
++E+L + ++P YN+LI GF G + A+ + M + ++ D+ T LI L K
Sbjct: 677 FSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLK 736
Query: 274 ERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHT 333
+ + A+ + M + P+ IY +++G Q K + M VTP+V
Sbjct: 737 DGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLI 796
Query: 334 YNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
YN +I+ +DEA L M K I PD T+ IL+ G
Sbjct: 797 YNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 186/441 (42%), Gaps = 52/441 (11%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
AV + ML + P N L +LV+ N A L ++ G+ D T +L+
Sbjct: 182 AVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMR 241
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDT-------------------TALTTLMK--GLCL 131
+ A VL + ++R +PD+ +L MK LC+
Sbjct: 242 ASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCV 301
Query: 132 ---------------NGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGA 176
G + AI D++ + G V V LI C+ + +
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNV----VAATSLITGHCKNNDLVS 357
Query: 177 ALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIY 234
AL L ++E+E + ++ +I+ ++ + A + Y +M + ++P VF +T+I
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417
Query: 235 GFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEP 294
G+ G + +A+ F+ E +V C+ ++ LCK+ K +A +++ M + P
Sbjct: 418 GWLKGQKHEEALKLFD-ESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476
Query: 295 NVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLF 354
NV YN ++ G+C M AR + + +G+ P+ +TY+I+I ++ A+ +
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 355 HYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM------CSNGIAYTSKLDAICN 408
++M +I+ + Y +I G + A LLA M C + ++Y S +D
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK 596
Query: 409 DYNFDDEIEKFMRYKETGGDA 429
+ D + Y+E G+
Sbjct: 597 EGEMDSAVAA---YEEMCGNG 614
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 118/311 (37%), Gaps = 72/311 (23%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
E +AV+++ M +P + + +++ L + N A+ + +++ KG+ DI
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 658
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
LI+ FC M A ++ ++L+ P +L+ G G + +A++ + +
Sbjct: 659 ALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD 718
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVS 208
G + C++G Y T+I + +D +
Sbjct: 719 GLR-----------------CDLG--------------------TYTTLIDGLLKDGNLI 741
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
A +LY EM + PD Y ++ G GQ K V F MK N+ P
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTP--------- 792
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
NV IYN +I G+ + +A L M +G+
Sbjct: 793 --------------------------NVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826
Query: 329 PDVHTYNIMIS 339
PD T++I++S
Sbjct: 827 PDGATFDILVS 837
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 148/354 (41%), Gaps = 42/354 (11%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A F + P + FN ++ ++ + L Q+E PD+ T + LI
Sbjct: 258 DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N C +M+ A + ++ KR P+ TTL+ G NGEI + + +KG Q
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQ 377
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAY 211
D+ +YNT++ C++ + A
Sbjct: 378 -------------------------------------PDIVLYNTLVNGFCKNGDLVAAR 400
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
++ + M+ + + PD TY TLI GFC GG + A+ M I+ D L+ +
Sbjct: 401 NIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGM 460
Query: 272 CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV 331
CKE +V A + M++A ++P+ Y ++D +C L M + G P V
Sbjct: 461 CKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSV 520
Query: 332 HTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHA 385
TYN++++ LC M A L M + PD TY+ L+EG H+ HA
Sbjct: 521 VTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG-----HHRHA 569
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 154/370 (41%), Gaps = 8/370 (2%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A+ F R PI N+L ++++N T ++ G ++ IL+
Sbjct: 188 DAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILM 247
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N FC G ++ A V +I KR+ QP + TL+ G C G + ++ +
Sbjct: 248 NKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTR 307
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH---TDVQMYNTIIKSMCEDKCVS 208
V TY LIN LC+ + A L ++ + DV ++ T+I + +
Sbjct: 308 PDV----FTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV-IFTTLIHGHSRNGEID 362
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
+ Y +ML K + PD+ YNTL+ GFC G L A + M ++PD T LI
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
C+ V+ A + M + +E + ++ L+ G C ++ A M G+
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK 482
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINL 388
PD TY +M+ C L M P TY++L+ G L +A L
Sbjct: 483 PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADML 542
Query: 389 LAEMCSNGIA 398
L M + G+
Sbjct: 543 LDAMLNIGVV 552
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 167/412 (40%), Gaps = 50/412 (12%)
Query: 6 SRFLSIPSLFMRYHSHSPRPFSHEAVNAVSS-FHNMLSMRPAPPITQFNNILGSLVRMNH 64
+RFL++ +F S S + N+ SS F +++ MR P + G LV
Sbjct: 125 ARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTP-------MCGFLVD--- 174
Query: 65 YPTAVSLSQQLELKGIAPDIATLTILINCF--CHLGRMNYAFSVLGKILKRAYQPDTTAL 122
+L G PD I CF R + G +L R + + T
Sbjct: 175 -----ALMITYTDLGFIPDA------IQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTG- 222
Query: 123 TTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLR 182
+ F+ ++ GF V + L+N+ C+ G A ++
Sbjct: 223 --------------TIWGFYMEILDAGFPLNV----YVFNILMNKFCKEGNISDAQKVFD 264
Query: 183 QIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGG 240
+I + V +NT+I C+ + + + L ++M R PDVFTY+ LI C
Sbjct: 265 EITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKEN 324
Query: 241 QLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYN 300
++ A G F+ M + P+ LIH + ++ M+ ++P++ +YN
Sbjct: 325 KMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYN 384
Query: 301 TLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLK 360
TL++G+C + AR + M RG+ PD TY +I C ++ A+ + MD
Sbjct: 385 TLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQN 444
Query: 361 DIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAIC 407
I+ D +S L+ G + A L EM GI YT +DA C
Sbjct: 445 GIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFC 496
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 168/353 (47%), Gaps = 6/353 (1%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + + ++ ++ A+ +S+ ++ +G+ ++ T +++IN F L AF+V
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 541
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
++K +PD ++ C G + AI +++ + + + T+ +I+
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ----KLRHRPTTRTFMPIIH 597
Query: 167 ELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
+ G+ +L++ + V +N +I + E + + A ++ +EM L +S
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
+ TY ++ G+ + G KA +F ++ E + D+ T + L+ A CK +++ A +V
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
M ++ N F+YN LIDG+ + +A L M GV PD+HTY IS +
Sbjct: 718 KEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
M+ A M+ +KP+ +TY+ LI+GW A++ EM + GI
Sbjct: 778 GDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 139/322 (43%), Gaps = 6/322 (1%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
NA + F +M+ P + +NNI+ + M + A+ ++++ P T +
Sbjct: 536 ANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPI 595
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
I+ + G M + V + + P L+ GL ++ A+ D++ G
Sbjct: 596 IHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG- 654
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCEDKCVS 208
V TY ++ VG+TG A + +++ E DV + Y ++K+ C+ +
Sbjct: 655 ---VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQ 711
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
A + EM + I + F YN LI G+ G + +A MK E +KPD+ T I
Sbjct: 712 SALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI 771
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
A K + +A + M V+PN+ Y TLI G+ + KA M G+
Sbjct: 772 SACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIK 831
Query: 329 PDVHTYNIMISWLCTSNMMDEA 350
PD Y+ +++ L + + EA
Sbjct: 832 PDKAVYHCLLTSLLSRASIAEA 853
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 158/361 (43%), Gaps = 20/361 (5%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
+ ++ ++ V++ + A ++ + + +G+ PD+ +I+ FC +G M+ A +
Sbjct: 519 LKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVK 578
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
++ K ++P T ++ G +G++R ++ D ++ G V T+ LIN L
Sbjct: 579 EMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVH----TFNGLINGL 634
Query: 169 CEVGETGAALQLLRQI------EEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRI 222
E + A+++L ++ EHT Y I++ A++ + + + +
Sbjct: 635 VEKRQMEKAVEILDEMTLAGVSANEHT----YTKIMQGYASVGDTGKAFEYFTRLQNEGL 690
Query: 223 SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS 282
D+FTY L+ C G+++ A+ M NI + + LI + V +A
Sbjct: 691 DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAAD 750
Query: 283 VVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC 342
++ M K V+P++ Y + I M +A M GV P++ TY +I
Sbjct: 751 LIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 810
Query: 343 TSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPH------YMHAINLLAEMCSNG 396
+++ ++A+S + M IKPD Y L+ L+ Y + + EM G
Sbjct: 811 RASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAG 870
Query: 397 I 397
+
Sbjct: 871 L 871
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 156/358 (43%), Gaps = 46/358 (12%)
Query: 90 LINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKG 149
+I C M A +++ ++ + T+M G + + + + +K G
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECG 479
Query: 150 FQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCV 207
F V VTY LIN +VG+ AL++ R ++EE +++ Y+ +I + K
Sbjct: 480 FTPTV----VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDW 535
Query: 208 SDAYDLYNEMLLKRISPDVFTYNTLIYGFCA----------------------------- 238
++A+ ++ +M+ + + PDV YN +I FC
Sbjct: 536 ANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPI 595
Query: 239 ------GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASV 292
G +R+++ F++M+ P V T + LI+ L ++R++++A ++ M A V
Sbjct: 596 IHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGV 655
Query: 293 EPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMS 352
N Y ++ GY + KA + G+ D+ TY ++ C S M A++
Sbjct: 656 SANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALA 715
Query: 353 LFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDA 405
+ M ++I ++ Y+ILI+GW A +L+ +M G+ YTS + A
Sbjct: 716 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISA 773
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 170/406 (41%), Gaps = 37/406 (9%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGR-MNYAFS 105
P T+F ++ R A +++ +GI P T LI+ + +GR M+ A S
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYA-VGRDMDEALS 365
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+ K+ + + + ++ G G +A + D+ K + + Y +I
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK----RIHKTLNASIYGKII 421
Query: 166 NELCEVGETGAALQLLRQIEEEHTD--VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRI- 222
C+ A L+R++EEE D + +Y+T++ D A + ++ KR+
Sbjct: 422 YAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMM-----DGYTMVADEKKGLVVFKRLK 476
Query: 223 ----SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVK 278
+P V TY LI + G++ KA+ VMK E +K ++ T +I+ K +
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 279 QANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA-------RFLSHTMATRGVTPDV 331
A +V M+K ++P+V +YN +I +C + M +A + L H TR P +
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 332 HTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE 391
H Y S M ++ +F M P T++ LI G + A+ +L E
Sbjct: 597 HGY-------AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDE 649
Query: 392 MCSNGIA-----YTSKLDAICNDYNFDDEIEKFMRYKETGGDADFL 432
M G++ YT + + + E F R + G D D
Sbjct: 650 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 695
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 155/335 (46%), Gaps = 7/335 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+ F M+ + P + F +++ L + A + +++ G P++ T T LI+
Sbjct: 271 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 330
Query: 93 CFCHLGRMNYAFSVLGKILKR-AYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
C G AF + K+++ Y+P+ T+++ G C ++ A +K +G
Sbjct: 331 GLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF 390
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSD 209
V+ TY LIN C+ G G A +L+ + +E ++ YN I S+C+ +
Sbjct: 391 PNVN----TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPE 446
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
AY+L N+ + D TY LI C + +A+ FF M + D+ + LI
Sbjct: 447 AYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIA 506
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
A C+++K+K++ + ++ + P Y ++I YC + A H M G P
Sbjct: 507 AFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVP 566
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKP 364
D TY +IS LC +M+DEA L+ M + + P
Sbjct: 567 DSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 163/349 (46%), Gaps = 10/349 (2%)
Query: 61 RMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTT 120
R+N AV + ++ +G+ P T+ ++ LG + YA +V ++ R PD++
Sbjct: 162 RLNE---AVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSS 218
Query: 121 ALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQL 180
+ ++ G +G+I+ A + + +GF D + T ++ LCE G A+
Sbjct: 219 SYKLMVIGCFRDGKIQEADRWLTGMIQRGFI--PDNATCT--LILTALCENGLVNRAIWY 274
Query: 181 LRQIEEEHTDVQMYN--TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA 238
R++ + + N ++I +C+ + A+++ EM+ P+V+T+ LI G C
Sbjct: 275 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 334
Query: 239 GGQLRKAVGFF-NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVF 297
G KA F +++ + KP+V T +I CKE K+ +A + + M + + PNV
Sbjct: 335 RGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 394
Query: 298 IYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYM 357
Y TLI+G+C +A L + M G P+++TYN I LC + EA L +
Sbjct: 395 TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA 454
Query: 358 DLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKLDAI 406
++ D TY+ILI+ A+ M G +L+ I
Sbjct: 455 FSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNI 503
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 184/403 (45%), Gaps = 14/403 (3%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL-I 91
AV +M + P N +L V + A ++ ++ ++G+ PD ++ ++ I
Sbjct: 166 AVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVI 225
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
CF G++ A L +++R + PD T ++ LC NG + AI + + GF+
Sbjct: 226 GCF-RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFK 284
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSD 209
+ + + LI+ LC+ G A ++L ++ +V + +I +C+
Sbjct: 285 PNL----INFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340
Query: 210 AYDLYNEMLLKRI-SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
A+ L+ +++ P+V TY ++I G+C +L +A F+ MK + + P+V+T LI
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
+ CK +A ++ M PN++ YN ID C ++ +A L + + G+
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINL 388
D TY I+I C N +++A++ F M+ + D +ILI + + L
Sbjct: 461 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 520
Query: 389 LAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKFMRYKETG 426
+ S G+ YTS + C + + D ++ F K G
Sbjct: 521 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 563
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 141/323 (43%), Gaps = 7/323 (2%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G P++ T LI+ C G + AF +L ++++ ++P+ T L+ GLC G A
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 341
Query: 139 IN-FHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYN 195
F V++ ++ V TY +I C+ + A L +++E+ +V Y
Sbjct: 342 FRLFLKLVRSDTYKPNVH----TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYT 397
Query: 196 TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME 255
T+I C+ AY+L N M + P+++TYN I C + +A N
Sbjct: 398 TLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSC 457
Query: 256 NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA 315
++ D T LI CK+ + QA + M K E ++ + N LI +C +M ++
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 316 RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
L + + G+ P TY MIS C +D A+ FH M PD+ TY LI G
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Query: 376 WLNLPHYMHAINLLAEMCSNGIA 398
A L M G++
Sbjct: 578 LCKKSMVDEACKLYEAMIDRGLS 600
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 136/326 (41%), Gaps = 9/326 (2%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + + +++G + + A L +++ +G+ P++ T T LIN C G A+ +
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
+ + + P+ + LC A + K F ++ VTY LI
Sbjct: 416 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN----KAFSCGLEADGVTYTILIQ 471
Query: 167 ELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
E C+ + AL ++ + D+++ N +I + C K + ++ L+ ++ + P
Sbjct: 472 EQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIP 531
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
TY ++I +C G + A+ +F+ MK PD T LI LCK+ V +A +
Sbjct: 532 TKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLY 591
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
AMI + P TL YC N A L + + V T ++ LC+
Sbjct: 592 EAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRT---LVRKLCSE 648
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYS 370
+ A F + KD D T +
Sbjct: 649 KKVGVAALFFQKLLEKDSSADRVTLA 674
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 117/298 (39%), Gaps = 47/298 (15%)
Query: 162 RFLINELCEVGETGAALQLLRQIEEEH---TDVQMYNTIIKSMCEDKCVSDAYDLYNEML 218
R ++ E+G A+ ++ ++ + + + M N +++ E + A ++++EM
Sbjct: 151 RCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITM-NCVLEIAVELGLIEYAENVFDEMS 209
Query: 219 LKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVK 278
++ + PD +Y ++ G G++++A + M PD +TC ++ ALC+ V
Sbjct: 210 VRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVN 269
Query: 279 QANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMI 338
+A MI +PN+ + +LIDG
Sbjct: 270 RAIWYFRKMIDLGFKPNLINFTSLIDG--------------------------------- 296
Query: 339 SWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCS---- 394
LC + +A + M KP+ T++ LI+G A L ++
Sbjct: 297 --LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTY 354
Query: 395 --NGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIVLRNPSFKATGFG 450
N YTS + C + + F R KE G + + ++ L N KA FG
Sbjct: 355 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN--VNTYTTLINGHCKAGSFG 410
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 173/376 (46%), Gaps = 29/376 (7%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A + F ++ + +N L LVR + A ++ +Q+ KGI P I + IL+
Sbjct: 309 DAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILM 368
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ C LG ++ A +++G + + PD L+ G C G++ +A + ++ +
Sbjct: 369 DGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM----MR 424
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSD 209
+ T L++ L ++G A +LLR++ E+ D N I+ +C +
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDK 484
Query: 210 AYDLYNEMLLKRIS-----------------------PDVFTYNTLIYGFCAGGQLRKAV 246
A ++ M + + PD+ TY+TL+ G C G+ +A
Sbjct: 485 AIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAK 544
Query: 247 GFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGY 306
F M E ++PD + IH CK+ K+ A V+ M K ++ YN+LI G
Sbjct: 545 NLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL 604
Query: 307 CLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDA 366
+ NQ+ + L M +G++P++ TYN I +LC +++A +L M K+I P+
Sbjct: 605 GIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNV 664
Query: 367 ETYSILIEGWLNLPHY 382
++ LIE + +P +
Sbjct: 665 FSFKYLIEAFCKVPDF 680
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 189/431 (43%), Gaps = 28/431 (6%)
Query: 6 SRFLSIPSLFMRYHSHSPRPFSHEAVNAVSSFHNMLSMRP--APPITQFNNILGSLVRMN 63
S LS+ S+F + +H + F F + S P P + +N +L S ++
Sbjct: 76 SSLLSVVSIFAK-SNHIDKAFPQ--------FQLVRSRFPENKPSVYLYNLLLESCIKER 126
Query: 64 HYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALT 123
L + + L GIAP T +LI C ++ A + ++ ++ +P+
Sbjct: 127 RVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFG 186
Query: 124 TLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQ 183
L++G C G + + +++ F V V Y +++ C G + +++ +
Sbjct: 187 ILVRGYCKAGLTDKGLELLNAMES----FGVLPNKVIYNTIVSSFCREGRNDDSEKMVEK 242
Query: 184 IEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRI----SPDVFTYNTLIYGFC 237
+ EE D+ +N+ I ++C++ V DA ++++M L P+ TYN ++ GFC
Sbjct: 243 MREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFC 302
Query: 238 AGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVF 297
G L A F ++ + + + + + L + K +A +V+ M + P+++
Sbjct: 303 KVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIY 362
Query: 298 IYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYM 357
YN L+DG C + ++ A+ + M GV PD TY ++ C+ +D A SL M
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422
Query: 358 DLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSK-----LDAICNDYNF 412
+ P+A T +IL+ + A LL +M G + +D +C
Sbjct: 423 MRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGEL 482
Query: 413 DDEIE--KFMR 421
D IE K MR
Sbjct: 483 DKAIEIVKGMR 493
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 149/350 (42%), Gaps = 25/350 (7%)
Query: 68 AVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMK 127
+ L +E G+ P+ +++ FC GR + + ++ K+ + PD + +
Sbjct: 201 GLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRIS 260
Query: 128 GLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE- 186
LC G++ A D++ + S+TY ++ C+VG A L I E
Sbjct: 261 ALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREN 320
Query: 187 -EHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKA 245
+ +Q YN ++ + +A + +M K I P +++YN L+ G C G L A
Sbjct: 321 DDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Query: 246 VGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDG 305
+MK + PD T L+H C KV A S++ M++ + PN + N L+
Sbjct: 381 KTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHS 440
Query: 306 YCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFH---------- 355
+ ++++A L M +G D T NI++ LC S +D+A+ +
Sbjct: 441 LWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAAL 500
Query: 356 ------YMDLKDIK-------PDAETYSILIEGWLNLPHYMHAINLLAEM 392
Y+ L D PD TYS L+ G + A NL AEM
Sbjct: 501 GNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 173/417 (41%), Gaps = 39/417 (9%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
+ A + M P I +N ++ L ++ A ++ ++ G+ PD T L
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL 402
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
++ +C +G+++ A S+L ++++ P+ L+ L G I A + KG+
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--------------------- 189
+VT +++ LC GE A+++++ + +
Sbjct: 463 GLD----TVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518
Query: 190 ----DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKA 245
D+ Y+T++ +C+ ++A +L+ EM+ +++ PD YN I+ FC G++ A
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA 578
Query: 246 VGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDG 305
M+ + + T + LI L + ++ + + ++ M + + PN+ YNT I
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQY 638
Query: 306 YCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPD 365
C ++ A L M + + P+V ++ +I C D A +F +
Sbjct: 639 LCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETA-VSICGQK 697
Query: 366 AETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLDAICNDYNFDDEIE 417
YS++ L + A LL + G Y ++++C DE+E
Sbjct: 698 EGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCK----KDELE 750
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 149/366 (40%), Gaps = 55/366 (15%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + +L + A SL Q++ P+ T IL++ +GR++ A +
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEEL 453
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKG----------FQFQVDR 156
L K+ ++ Y DT ++ GLC +GE+ AI ++ G + VD
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513
Query: 157 V---------SVTYRFLINELCEVGETGAALQLLRQI--EEEHTDVQMYNTIIKSMCEDK 205
+TY L+N LC+ G A L ++ E+ D YN I C+
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQG 573
Query: 206 CVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCD 265
+S A+ + +M K + TYN+LI G Q+ + G + MK + I P++ T +
Sbjct: 574 KISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYN 633
Query: 266 PLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI---------------- 309
I LC+ KV+ A +++ M++ ++ PNVF + LI+ +C +
Sbjct: 634 TAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI 693
Query: 310 ------------------NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAM 351
Q+ KA L + RG Y ++ LC + ++ A
Sbjct: 694 CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVAS 753
Query: 352 SLFHYM 357
+ H M
Sbjct: 754 GILHKM 759
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 127/318 (39%), Gaps = 52/318 (16%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + ++ +L L + + A +L ++ + + PD I I+ FC G+++ AF V
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
L + K+ +L+ GL + +I D++K KG
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS--------------- 626
Query: 167 ELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
++ YNT I+ +CE + V DA +L +EM+ K I+P+V
Sbjct: 627 ----------------------PNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNV 664
Query: 227 FTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP-------LIHALCKERKVKQ 279
F++ LI FC V F+ M E + VS C + + L ++ +
Sbjct: 665 FSFKYLIEAFC-------KVPDFD-MAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLK 716
Query: 280 ANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMIS 339
A ++ A++ E F+Y L++ C +++ A + H M RG D +I
Sbjct: 717 ATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVID 776
Query: 340 WLCTSNMMDEAMSLFHYM 357
L EA S M
Sbjct: 777 GLGKMGNKKEANSFADKM 794
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 172/377 (45%), Gaps = 12/377 (3%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P + FN+I+ ++ A S + G+ P + + ILIN C +G + A
Sbjct: 219 GPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALE 278
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+ + K +PD+ L KG L G I A D+ KG V +TY L+
Sbjct: 279 LASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDV----ITYTILL 334
Query: 166 NELCEVGETGAALQLLRQIEE---EHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRI 222
C++G L LL+ + E + + ++ +C+ + +A L+N+M +
Sbjct: 335 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 394
Query: 223 SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS 282
SPD+ Y+ +I+G C G+ A+ ++ M + I P+ T L+ LC++ + +A S
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 283 VVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC 342
++ ++I + ++ +YN +IDGY + +A L + G+TP V T+N +I C
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 343 TSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI----- 397
+ + EA + + L + P +Y+ L++ + N + L EM + GI
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 398 AYTSKLDAICNDYNFDD 414
Y+ +C + ++
Sbjct: 575 TYSVIFKGLCRGWKHEN 591
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 171/380 (45%), Gaps = 14/380 (3%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
++ ++ L R AV + E K I P + + +++ +C LG ++ A S +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
K P + L+ GLCL G I A+ D+ G V+ SVTY L +
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG----VEPDSVTYNILAKGFHLL 305
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPD-VFT 228
G A +++R + ++ DV Y ++ C+ + L +ML + + +
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
+ ++ G C G++ +A+ FN MK + + PD+ +IH LCK K A + M
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 289 KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMD 348
+ PN + L+ G C + +AR L ++ + G T D+ YNI+I S ++
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 349 EAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKL 403
EA+ LF + I P T++ LI G+ + A +L + G+A YT+ +
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 404 DAI--CNDYNFDDEIEKFMR 421
DA C + DE+ + M+
Sbjct: 546 DAYANCGNTKSIDELRREMK 565
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 152/345 (44%), Gaps = 5/345 (1%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A S F +L P + N ++ L + A+ L+ + G+ PD T IL
Sbjct: 241 AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK 300
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
F LG ++ A+ V+ +L + PD T L+ G C G I + D+ ++GF+
Sbjct: 301 GFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDA 210
+ +++ LC+ G AL L Q++ + D+ Y+ +I +C+ A
Sbjct: 361 NS---IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
LY+EM KRI P+ T+ L+ G C G L +A + + D+ + +I
Sbjct: 418 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDG 477
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
K +++A + +I+ + P+V +N+LI GYC + +AR + + G+ P
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 537
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
V +Y ++ L M + I P TYS++ +G
Sbjct: 538 VVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 582
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 147/335 (43%), Gaps = 18/335 (5%)
Query: 55 ILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRA 114
+L L + A+SL Q++ G++PD+ +I+I+ C LG+ + A + ++ +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 115 YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGET 174
P++ L+ GLC G + A + D + + G + V Y +I+ + G
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI----VLYNIVIDGYAKSGCI 484
Query: 175 GAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL 232
AL+L + + E V +N++I C+ + +++A + + + L ++P V +Y TL
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 233 IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI---- 288
+ + G + MK E I P T + LC+ K + N V+ I
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 289 --------KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISW 340
+ P+ YNT+I C + ++ A M +R + TYNI+I
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
LC + +A S + + +++ Y+ LI+
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 699
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 16/271 (5%)
Query: 177 ALQLLRQIEEEHTDV--QMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIY 234
+L +L+++++++ +V Q YN+++ E +D+Y E+ K + TY+T++
Sbjct: 143 SLYILKKMKDQNLNVSTQSYNSVLYHFRE---TDKMWDVYKEIKDK----NEHTYSTVVD 195
Query: 235 GFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEP 294
G C +L AV F + ++I P V + + ++ CK V A S ++K + P
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 295 NVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLF 354
+V+ +N LI+G CL+ + +A L+ M GV PD TYNI+ M+ A +
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 355 HYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTS------KLDAICN 408
M K + PD TY+IL+ G L + + LL +M S G S L +C
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCK 375
Query: 409 DYNFDDEIEKFMRYKETGGDADFLIASHIVL 439
D+ + F + K G D L+A IV+
Sbjct: 376 TGRIDEALSLFNQMKADGLSPD-LVAYSIVI 405
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 136/318 (42%), Gaps = 25/318 (7%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
+ A S +++S I +N ++ + A+ L + + GI P +AT L
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSL 509
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
I +C + A +L I P + TTLM G +S ++KA+G
Sbjct: 510 IYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG- 568
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDA 210
+ +VTY + LC R + E+ N +++ +KC
Sbjct: 569 ---IPPTNVTYSVIFKGLC------------RGWKHENC-----NHVLRERIFEKCKQGL 608
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
D+ +E I PD TYNT+I C L A F +MK N+ +T + LI +
Sbjct: 609 RDMESE----GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
LC +++A+S + ++ + +V + F Y TLI +C+ A L H + RG
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 724
Query: 331 VHTYNIMISWLCTSNMMD 348
+ Y+ +I+ LC ++M+
Sbjct: 725 IRDYSAVINRLCRRHLMN 742
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 172/377 (45%), Gaps = 12/377 (3%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P + FN+I+ ++ A S + G+ P + + ILIN C +G + A
Sbjct: 219 GPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALE 278
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+ + K +PD+ L KG L G I A D+ KG V +TY L+
Sbjct: 279 LASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDV----ITYTILL 334
Query: 166 NELCEVGETGAALQLLRQIEE---EHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRI 222
C++G L LL+ + E + + ++ +C+ + +A L+N+M +
Sbjct: 335 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 394
Query: 223 SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS 282
SPD+ Y+ +I+G C G+ A+ ++ M + I P+ T L+ LC++ + +A S
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 283 VVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC 342
++ ++I + ++ +YN +IDGY + +A L + G+TP V T+N +I C
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 343 TSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI----- 397
+ + EA + + L + P +Y+ L++ + N + L EM + GI
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 398 AYTSKLDAICNDYNFDD 414
Y+ +C + ++
Sbjct: 575 TYSVIFKGLCRGWKHEN 591
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 171/380 (45%), Gaps = 14/380 (3%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
++ ++ L R AV + E K I P + + +++ +C LG ++ A S +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
K P + L+ GLCL G I A+ D+ G V+ SVTY L +
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG----VEPDSVTYNILAKGFHLL 305
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPD-VFT 228
G A +++R + ++ DV Y ++ C+ + L +ML + + +
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
+ ++ G C G++ +A+ FN MK + + PD+ +IH LCK K A + M
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 289 KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMD 348
+ PN + L+ G C + +AR L ++ + G T D+ YNI+I S ++
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 349 EAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKL 403
EA+ LF + I P T++ LI G+ + A +L + G+A YT+ +
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 404 DAI--CNDYNFDDEIEKFMR 421
DA C + DE+ + M+
Sbjct: 546 DAYANCGNTKSIDELRREMK 565
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 152/345 (44%), Gaps = 5/345 (1%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A S F +L P + N ++ L + A+ L+ + G+ PD T IL
Sbjct: 241 AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK 300
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
F LG ++ A+ V+ +L + PD T L+ G C G I + D+ ++GF+
Sbjct: 301 GFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDA 210
+ +++ LC+ G AL L Q++ + D+ Y+ +I +C+ A
Sbjct: 361 NS---IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
LY+EM KRI P+ T+ L+ G C G L +A + + D+ + +I
Sbjct: 418 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDG 477
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
K +++A + +I+ + P+V +N+LI GYC + +AR + + G+ P
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 537
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
V +Y ++ L M + I P TYS++ +G
Sbjct: 538 VVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 582
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 147/335 (43%), Gaps = 18/335 (5%)
Query: 55 ILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRA 114
+L L + A+SL Q++ G++PD+ +I+I+ C LG+ + A + ++ +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 115 YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGET 174
P++ L+ GLC G + A + D + + G + V Y +I+ + G
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI----VLYNIVIDGYAKSGCI 484
Query: 175 GAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL 232
AL+L + + E V +N++I C+ + +++A + + + L ++P V +Y TL
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 233 IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI---- 288
+ + G + MK E I P T + LC+ K + N V+ I
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 289 --------KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISW 340
+ P+ YNT+I C + ++ A M +R + TYNI+I
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
LC + +A S + + +++ Y+ LI+
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 699
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 16/271 (5%)
Query: 177 ALQLLRQIEEEHTDV--QMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIY 234
+L +L+++++++ +V Q YN+++ E +D+Y E+ K + TY+T++
Sbjct: 143 SLYILKKMKDQNLNVSTQSYNSVLYHFRE---TDKMWDVYKEIKDK----NEHTYSTVVD 195
Query: 235 GFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEP 294
G C +L AV F + ++I P V + + ++ CK V A S ++K + P
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 295 NVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLF 354
+V+ +N LI+G CL+ + +A L+ M GV PD TYNI+ M+ A +
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 355 HYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTS------KLDAICN 408
M K + PD TY+IL+ G L + + LL +M S G S L +C
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCK 375
Query: 409 DYNFDDEIEKFMRYKETGGDADFLIASHIVL 439
D+ + F + K G D L+A IV+
Sbjct: 376 TGRIDEALSLFNQMKADGLSPD-LVAYSIVI 405
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 136/318 (42%), Gaps = 25/318 (7%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
+ A S +++S I +N ++ + A+ L + + GI P +AT L
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSL 509
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
I +C + A +L I P + TTLM G +S ++KA+G
Sbjct: 510 IYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG- 568
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDA 210
+ +VTY + LC R + E+ N +++ +KC
Sbjct: 569 ---IPPTNVTYSVIFKGLC------------RGWKHENC-----NHVLRERIFEKCKQGL 608
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
D+ +E I PD TYNT+I C L A F +MK N+ +T + LI +
Sbjct: 609 RDMESE----GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
LC +++A+S + ++ + +V + F Y TLI +C+ A L H + RG
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 724
Query: 331 VHTYNIMISWLCTSNMMD 348
+ Y+ +I+ LC ++M+
Sbjct: 725 IRDYSAVINRLCRRHLMN 742
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 153/313 (48%), Gaps = 12/313 (3%)
Query: 28 HEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATL 87
EA+ + SF R P I +++ L ++ A ++ Q++ G+ PD
Sbjct: 358 EEAIKLIHSF------RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCY 411
Query: 88 TILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKA 147
T +I+ +C+LGR + AF G +LK P T T L+ G I A + ++K
Sbjct: 412 TTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKT 471
Query: 148 KGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDK 205
+G + V VTY L++ + + +L+ ++ DV YN +I SM
Sbjct: 472 EGLKLDV----VTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Query: 206 CVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCD 265
+ +A ++ +E++ + P + +I GF G ++A + M +KPDV TC
Sbjct: 528 YIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCS 587
Query: 266 PLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATR 325
L+H CK +++++A + ++ A ++P+V +YNTLI GYC + + KA L M R
Sbjct: 588 ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQR 647
Query: 326 GVTPDVHTYNIMI 338
G+ P+ T++ ++
Sbjct: 648 GMLPNESTHHALV 660
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 163/353 (46%), Gaps = 9/353 (2%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P I F + L + A S+ +L+L GI+ D +++ +I+ FC +G+ A +
Sbjct: 304 PDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL 363
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
+ R P+ ++ + +C G++ A ++ F+ + V Y +I+
Sbjct: 364 IHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEI----FELGLLPDCVCYTTMID 416
Query: 167 ELCEVGETGAALQLLRQIEEEHTDVQMY-NTIIKSMCED-KCVSDAYDLYNEMLLKRISP 224
C +G T A Q + + + +TI+ C +SDA ++ M + +
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
DV TYN L++G+ QL K + M+ I PDV+T + LIH++ + +AN ++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
+ +I+ P+ + +I G+ +A L MA + PDV T + ++ C +
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
M++A+ LF+ + +KPD Y+ LI G+ ++ A L+ M G+
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 173/390 (44%), Gaps = 10/390 (2%)
Query: 54 NILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKR 113
++L ++R++ A + + +G + A L++ I +C G + + +L +
Sbjct: 241 SLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHY 300
Query: 114 AYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGE 173
+PD A T + LC G ++ A + +K F + + SV+ +I+ C+VG+
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL----FGISQDSVSVSSVIDGFCKVGK 356
Query: 174 TGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLI 233
A++L+ ++ +Y++ + ++C + A ++ E+ + PD Y T+I
Sbjct: 357 PEEAIKLIHSFRLR-PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMI 415
Query: 234 YGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVE 293
G+C G+ KA +F + P ++T LI A + + A SV M ++
Sbjct: 416 DGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLK 475
Query: 294 PNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSL 353
+V YN L+ GY +Q+ K L M + G++PDV TYNI+I + +DEA +
Sbjct: 476 LDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEI 535
Query: 354 FHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCS-----NGIAYTSKLDAICN 408
+ + P ++ +I G+ + A L M + + ++ L C
Sbjct: 536 ISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCK 595
Query: 409 DYNFDDEIEKFMRYKETGGDADFLIASHIV 438
+ I F + + G D ++ + ++
Sbjct: 596 AQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 137/316 (43%), Gaps = 9/316 (2%)
Query: 85 ATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDD 144
+ILI+C ++N A + K+ + P +L+K + + A F +
Sbjct: 202 TVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEH 261
Query: 145 VKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMC 202
+ ++G +S+ I + C G +LL ++ D+ + I +C
Sbjct: 262 MLSRGRHLNAAVLSL----FIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLC 317
Query: 203 EDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVS 262
+ + +A + ++ L IS D + +++I GFC G+ +A+ + ++ +P++
Sbjct: 318 KAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL---RPNIF 374
Query: 263 TCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTM 322
+ +C + +A+++ + + + P+ Y T+IDGYC + + KA +
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 323 ATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHY 382
G P + T I+I + +A S+F M + +K D TY+ L+ G+
Sbjct: 435 LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQL 494
Query: 383 MHAINLLAEMCSNGIA 398
L+ EM S GI+
Sbjct: 495 NKVFELIDEMRSAGIS 510
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 153/313 (48%), Gaps = 12/313 (3%)
Query: 28 HEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATL 87
EA+ + SF R P I +++ L ++ A ++ Q++ G+ PD
Sbjct: 358 EEAIKLIHSF------RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCY 411
Query: 88 TILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKA 147
T +I+ +C+LGR + AF G +LK P T T L+ G I A + ++K
Sbjct: 412 TTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKT 471
Query: 148 KGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDK 205
+G + V VTY L++ + + +L+ ++ DV YN +I SM
Sbjct: 472 EGLKLDV----VTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Query: 206 CVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCD 265
+ +A ++ +E++ + P + +I GF G ++A + M +KPDV TC
Sbjct: 528 YIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCS 587
Query: 266 PLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATR 325
L+H CK +++++A + ++ A ++P+V +YNTLI GYC + + KA L M R
Sbjct: 588 ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQR 647
Query: 326 GVTPDVHTYNIMI 338
G+ P+ T++ ++
Sbjct: 648 GMLPNESTHHALV 660
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 163/353 (46%), Gaps = 9/353 (2%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P I F + L + A S+ +L+L GI+ D +++ +I+ FC +G+ A +
Sbjct: 304 PDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL 363
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
+ R P+ ++ + +C G++ A ++ F+ + V Y +I+
Sbjct: 364 IHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEI----FELGLLPDCVCYTTMID 416
Query: 167 ELCEVGETGAALQLLRQIEEEHTDVQMY-NTIIKSMCED-KCVSDAYDLYNEMLLKRISP 224
C +G T A Q + + + +TI+ C +SDA ++ M + +
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
DV TYN L++G+ QL K + M+ I PDV+T + LIH++ + +AN ++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
+ +I+ P+ + +I G+ +A L MA + PDV T + ++ C +
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
M++A+ LF+ + +KPD Y+ LI G+ ++ A L+ M G+
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 173/390 (44%), Gaps = 10/390 (2%)
Query: 54 NILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKR 113
++L ++R++ A + + +G + A L++ I +C G + + +L +
Sbjct: 241 SLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHY 300
Query: 114 AYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGE 173
+PD A T + LC G ++ A + +K F + + SV+ +I+ C+VG+
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL----FGISQDSVSVSSVIDGFCKVGK 356
Query: 174 TGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLI 233
A++L+ ++ +Y++ + ++C + A ++ E+ + PD Y T+I
Sbjct: 357 PEEAIKLIHSFRLR-PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMI 415
Query: 234 YGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVE 293
G+C G+ KA +F + P ++T LI A + + A SV M ++
Sbjct: 416 DGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLK 475
Query: 294 PNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSL 353
+V YN L+ GY +Q+ K L M + G++PDV TYNI+I + +DEA +
Sbjct: 476 LDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEI 535
Query: 354 FHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCS-----NGIAYTSKLDAICN 408
+ + P ++ +I G+ + A L M + + ++ L C
Sbjct: 536 ISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCK 595
Query: 409 DYNFDDEIEKFMRYKETGGDADFLIASHIV 438
+ I F + + G D ++ + ++
Sbjct: 596 AQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 137/316 (43%), Gaps = 9/316 (2%)
Query: 85 ATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDD 144
+ILI+C ++N A + K+ + P +L+K + + A F +
Sbjct: 202 TVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEH 261
Query: 145 VKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMC 202
+ ++G +S+ I + C G +LL ++ D+ + I +C
Sbjct: 262 MLSRGRHLNAAVLSL----FIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLC 317
Query: 203 EDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVS 262
+ + +A + ++ L IS D + +++I GFC G+ +A+ + ++ +P++
Sbjct: 318 KAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL---RPNIF 374
Query: 263 TCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTM 322
+ +C + +A+++ + + + P+ Y T+IDGYC + + KA +
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 323 ATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHY 382
G P + T I+I + +A S+F M + +K D TY+ L+ G+
Sbjct: 435 LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQL 494
Query: 383 MHAINLLAEMCSNGIA 398
L+ EM S GI+
Sbjct: 495 NKVFELIDEMRSAGIS 510
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 184/384 (47%), Gaps = 12/384 (3%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S E A+ SFH+M +P + F ++ + AVSL +++ ++ ++ T
Sbjct: 176 SGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT 235
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
T LI+ FC G M A + ++++ +P++ TT++ G G+ +A+ F +
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCED 204
+G + + Y +I+ LC G+ A +++ +E+ D+ ++ T++ + +
Sbjct: 296 NQGMRLDI----TAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 205 KCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTC 264
+ A ++Y++++ + PDV +T+I G GQL +A+ +F + K ++ V
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTV--- 408
Query: 265 DPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMAT 324
LI ALCKE + + + + +A + P+ F+Y + I G C + A L M
Sbjct: 409 --LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQ 466
Query: 325 RGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMH 384
G+ D+ Y +I L + +M EA +F M I PD+ + +LI + +
Sbjct: 467 EGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAA 526
Query: 385 AINLLAEMCSNGIAYTSKLDAICN 408
A +LL +M G+ T+ DA C+
Sbjct: 527 ASDLLLDMQRRGLV-TAVSDADCS 549
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 168/349 (48%), Gaps = 9/349 (2%)
Query: 78 KGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRS 137
+G P ++ +++ C LG++ +A ++ + + +PD + +L+ G C NG+IRS
Sbjct: 50 RGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRS 109
Query: 138 AINFHDDVKAK-GFQFQVDRVSVTYRF-LINELCEVGETGAALQLLRQIEEEHTDVQMYN 195
A + ++A GF + D VS F +++ + E + ++ ++ +V Y+
Sbjct: 110 ASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM--LKCCSPNVVTYS 167
Query: 196 TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME 255
T I + C+ + A ++ M +SP+V T+ LI G+C G L AV + M+
Sbjct: 168 TWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRV 227
Query: 256 NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA 315
+ +V T LI CK+ ++++A + + M++ VEPN +Y T+IDG+ A
Sbjct: 228 RMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNA 287
Query: 316 RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
M +G+ D+ Y ++IS LC + + EA + M+ D+ PD ++ ++
Sbjct: 288 MKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNA 347
Query: 376 WLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKF 419
+ A+N+ ++ G +A ++ +D I + + I F
Sbjct: 348 YFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 179/411 (43%), Gaps = 20/411 (4%)
Query: 38 HNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKG---IAPDIATLTILINCF 94
H+M P + +N+++ R +A + + L PDI + L N F
Sbjct: 80 HSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGF 139
Query: 95 CHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQV 154
+ ++ F +G +LK P+ +T + C +GE++ A+ +K V
Sbjct: 140 SKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNV 198
Query: 155 DRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYD 212
VT+ LI+ C+ G+ A+ L +++ +V Y +I C+ + A +
Sbjct: 199 ----VTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEE 254
Query: 213 LYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALC 272
+Y+ M+ R+ P+ Y T+I GF G A+ F M + ++ D++ +I LC
Sbjct: 255 MYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLC 314
Query: 273 KERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVH 332
K+K+A +V M K+ + P++ I+ T+++ Y +M A + H + RG PDV
Sbjct: 315 GNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVV 374
Query: 333 TYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
+ MI + + + EA+ F D+ Y++LI+ ++ L +++
Sbjct: 375 ALSTMIDGIAKNGQLHEAIVYFCIEKANDV-----MYTVLIDALCKEGDFIEVERLFSKI 429
Query: 393 CSNGIA-----YTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
G+ YTS + +C N D + R + G D L + ++
Sbjct: 430 SEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 102/274 (37%), Gaps = 77/274 (28%)
Query: 242 LRKAVGFFNVMKMENIKPDVSTCDPLIHAL------------------------------ 271
+R+A+ F + ++ + PD TC+ IH L
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 272 -----CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC------------------- 307
CK +VK A +V +M + EP+V YN+LIDG+C
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 308 -------------LINQMTKARFLSHTMATRGV-----TPDVHTYNIMISWLCTSNMMDE 349
L N +K + L GV +P+V TY+ I C S +
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQL 181
Query: 350 AMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE-----MCSNGIAYTSKLD 404
A+ FH M + P+ T++ LI+G+ A++L E M N + YT+ +D
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241
Query: 405 AICNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
C E + R E + + L+ + I+
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTII 275
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 175/392 (44%), Gaps = 44/392 (11%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G++PD+ L +LI+ FC +GR+++A S+L R DT T++ GLC +G A
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLL---RNRVISIDTVTYNTVISGLCEHGLADEA 180
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE----EHT----- 189
F ++ G +V+Y LI+ C+VG A L+ +I E HT
Sbjct: 181 YQFLSEMVKMGILPD----TVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSS 236
Query: 190 ---------------------DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFT 228
DV +++II +C+ V + L EM + P+ T
Sbjct: 237 YYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVT 296
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
Y TL+ R A+ ++ M + I D+ L+ L K +++A ++
Sbjct: 297 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 356
Query: 289 KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMD 348
+ + PNV Y L+DG C ++ A F+ M + V P+V TY+ MI+ M++
Sbjct: 357 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416
Query: 349 EAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSK-LDAIC 407
EA+SL M+ +++ P+ TY +I+G AI L EM G+ + LDA+
Sbjct: 417 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALV 476
Query: 408 NDYNFDDEIEKFMRYKETGGDADFLIASHIVL 439
N +++ R KE G +++ + L
Sbjct: 477 N------HLKRIGRIKEVKGLVKDMVSKGVTL 502
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 137/304 (45%), Gaps = 6/304 (1%)
Query: 78 KGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRS 137
KGI PDIAT I++N G + K+ +P + ++ LC NG++
Sbjct: 567 KGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEE 626
Query: 138 AINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDV--QMYN 195
AI+ + + ++ TYR ++ + A + + + Q+YN
Sbjct: 627 AIHILNQM----MLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYN 682
Query: 196 TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME 255
T+I ++C+ A + +M + PD T+N+L++G+ G +RKA+ ++VM
Sbjct: 683 TLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEA 742
Query: 256 NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA 315
I P+V+T + +I L +K+ + ++ M + P+ F YN LI G I M +
Sbjct: 743 GISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGS 802
Query: 316 RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
+ M G+ P TYN++IS M +A L M + + P+ TY +I G
Sbjct: 803 MTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISG 862
Query: 376 WLNL 379
L
Sbjct: 863 LCKL 866
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 178/412 (43%), Gaps = 23/412 (5%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+N ++ L A ++ GI PD + LI+ FC +G A +++ +I
Sbjct: 164 YNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS 223
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+ T L++ + + + D+ GF V VT+ +IN LC+
Sbjct: 224 ELNLITHTILLSSYY-------NLHAIEEAYRDMVMSGFDPDV----VTFSSIINRLCKG 272
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
G+ LLR++EE + + Y T++ S+ + A LY++M+++ I D+ Y
Sbjct: 273 GKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVY 332
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
L+ G G LR+A F ++ +N P+V T L+ LCK + A ++ M++
Sbjct: 333 TVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLE 392
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
SV PNV Y+++I+GY + +A L M + V P+ TY +I L + +
Sbjct: 393 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 452
Query: 350 AMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLD 404
A+ L M L ++ + L+ + L+ +M S G+ YTS +D
Sbjct: 453 AIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Query: 405 AICNDYNFDDEIEKFMRYKETGGDADFLIASHIVLRNPSFKATGFGTYSLDW 456
+ + + +E G D + S+ VL + K FG DW
Sbjct: 513 VFFKGGDEEAALAWAEEMQERGMPWD--VVSYNVLISGMLK---FGKVGADW 559
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 157/343 (45%), Gaps = 18/343 (5%)
Query: 75 LELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGE 134
++ +G+ D+ + +LI+ G++ ++ G + ++ +PD +M G+
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGD 588
Query: 135 IRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQ--IEEEHTDVQ 192
+ D +K+ G + + ++ ++ LCE G+ A+ +L Q + E H ++
Sbjct: 589 SEGILKLWDKMKSCGIKPSL----MSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLT 644
Query: 193 MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
Y + + + K + + +L I YNTLI C G +KA M
Sbjct: 645 TYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDM 704
Query: 253 KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC---LI 309
+ PD T + L+H V++A S + M++A + PNV YNT+I G LI
Sbjct: 705 EARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLI 764
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
++ K +LS M +RG+ PD TYN +IS M +M+++ M + P TY
Sbjct: 765 KEVDK--WLSE-MKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTY 821
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLDAIC 407
++LI + N+ + A LL EM G++ Y + + +C
Sbjct: 822 NVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 173/403 (42%), Gaps = 42/403 (10%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
AVS M P + ++ L + A+ LS+++ L G+ + L L+N
Sbjct: 418 AVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVN 477
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
+GR+ ++ ++ + D T+L+ G+ +A+ + ++++ +G +
Sbjct: 478 HLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPW 537
Query: 153 QVDRVSVTYRFLINELCEVGETGA--ALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDA 210
V V+Y LI+ + + G+ GA A + +R+ E D+ +N ++ S +
Sbjct: 538 DV----VSYNVLISGMLKFGKVGADWAYKGMREKGIE-PDIATFNIMMNSQRKQGDSEGI 592
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTC------ 264
L+++M I P + + N ++ C G++ +A+ N M + I P+++T
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 652
Query: 265 -----------------------------DPLIHALCKERKVKQANSVVAAMIKASVEPN 295
+ LI LCK K+A V+ M P+
Sbjct: 653 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 712
Query: 296 VFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFH 355
+N+L+ GY + + + KA M G++P+V TYN +I L + ++ E
Sbjct: 713 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772
Query: 356 YMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA 398
M + ++PD TY+ LI G + + ++ + EM ++G+
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLV 815
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 37/251 (14%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDL-YNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGF 248
D +++N++I + V D L Y++M+ +SPDVF N LI+ FC G+L A+
Sbjct: 92 DSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAI-- 149
Query: 249 FNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC- 307
++++ I D T + +I LC+ +A ++ M+K + P+ YNTLIDG+C
Sbjct: 150 -SLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCK 208
Query: 308 ---------LINQMTKARFLSHT------------------MATRGVTPDVHTYNIMISW 340
L++++++ ++HT M G PDV T++ +I+
Sbjct: 209 VGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINR 268
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI--- 397
LC + E L M+ + P+ TY+ L++ Y HA+ L ++M GI
Sbjct: 269 LCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVD 328
Query: 398 --AYTSKLDAI 406
YT +D +
Sbjct: 329 LVVYTVLMDGL 339
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 176/410 (42%), Gaps = 37/410 (9%)
Query: 1 MSLFRSRFLSIPSLFMRYHSHSPRPFSHEAVNAVSSF-HNMLSMRPAPPITQFNNILGSL 59
+SL R+R +SI ++ Y++ H + F M+ M P +N ++
Sbjct: 149 ISLLRNRVISIDTV--TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGF 206
Query: 60 VRMNHYPTAVSLSQQLE----------------------------LKGIAPDIATLTILI 91
++ ++ A +L ++ + G PD+ T + +I
Sbjct: 207 CKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSII 266
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N C G++ +L ++ + + P+ TTL+ L R A+ + + +G
Sbjct: 267 NRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIP 326
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSD 209
+ V Y L++ L + G+ A + + + E++ +V Y ++ +C+ +S
Sbjct: 327 VDL----VVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSS 382
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A + +ML K + P+V TY+++I G+ G L +AV M+ +N+ P+ T +I
Sbjct: 383 AEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVID 442
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
L K K + A + M VE N +I + L++ I ++ + + L M ++GVT
Sbjct: 443 GLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTL 502
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNL 379
D Y +I + A++ M + + D +Y++LI G L
Sbjct: 503 DQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKF 552
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 186/434 (42%), Gaps = 42/434 (9%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A +F +L P + + ++ L + +A + Q+ K + P++ T + +IN
Sbjct: 348 AEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMIN 407
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ- 151
+ G + A S+L K+ + P+ T++ GL G+ AI +++ G +
Sbjct: 408 GYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEE 467
Query: 152 ------------FQVDRV------------------SVTYRFLINELCEVGETGAALQLL 181
++ R+ + Y LI+ + G+ AAL
Sbjct: 468 NNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWA 527
Query: 182 RQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAG 239
+++E DV YN +I M + V + Y M K I PD+ T+N ++
Sbjct: 528 EEMQERGMPWDVVSYNVLISGMLKFGKVGADW-AYKGMREKGIEPDIATFNIMMNSQRKQ 586
Query: 240 GQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIY 299
G + ++ MK IKP + +C+ ++ LC+ K+++A ++ M+ + PN+ Y
Sbjct: 587 GDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTY 646
Query: 300 NTLIDGYCLINQMTKARFLSH-TMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
+D ++ A F +H T+ + G+ YN +I+ LC M +A + M+
Sbjct: 647 RIFLDTSSK-HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDME 705
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLDAICNDYNFD 413
+ PD T++ L+ G+ H A++ + M GI+ Y + + + +D
Sbjct: 706 ARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGL-SDAGLI 764
Query: 414 DEIEKFMRYKETGG 427
E++K++ ++ G
Sbjct: 765 KEVDKWLSEMKSRG 778
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 160/375 (42%), Gaps = 42/375 (11%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
M M P + ++ SL + N Y A++L Q+ ++GI D+ T+L++
Sbjct: 282 LREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 341
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
G + A +L+ P+ T L+ GLC G++ SA + + + + V
Sbjct: 342 AGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA----EFIITQMLEKSVIP 397
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMC------------ 202
VTY +IN + G A+ LLR++E+++ + Y T+I +
Sbjct: 398 NVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELS 457
Query: 203 ---------EDKCVSDAY--------------DLYNEMLLKRISPDVFTYNTLIYGFCAG 239
E+ + DA L +M+ K ++ D Y +LI F G
Sbjct: 458 KEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKG 517
Query: 240 GQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIY 299
G A+ + M+ + DV + + LI + K KV A+ M + +EP++ +
Sbjct: 518 GDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATF 576
Query: 300 NTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDL 359
N +++ L M + G+ P + + NI++ LC + M+EA+ + + M L
Sbjct: 577 NIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMML 636
Query: 360 KDIKPDAETYSILIE 374
+I P+ TY I ++
Sbjct: 637 MEIHPNLTTYRIFLD 651
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 107/275 (38%), Gaps = 37/275 (13%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+ + M+ M P +T + L + + + L GI LI
Sbjct: 627 AIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIA 686
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C LG A V+G + R + PDT +LM G + +R A++
Sbjct: 687 TLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALS------------ 734
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYD 212
TY ++ E G + +V YNTII+ + + + +
Sbjct: 735 -------TYSVMM-------EAGIS-----------PNVATYNTIIRGLSDAGLIKEVDK 769
Query: 213 LYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALC 272
+EM + + PD FTYN LI G G ++ ++ + M + + P ST + LI
Sbjct: 770 WLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFA 829
Query: 273 KERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC 307
K+ QA ++ M K V PN Y T+I G C
Sbjct: 830 NVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 162/343 (47%), Gaps = 7/343 (2%)
Query: 53 NNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILK 112
N I + A S + +E KGI P++ ++ C + M+ A S+ ++L+
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 113 RAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVG 172
+ +P+ + L+ G N + ++A + + + A F+ V Y +IN LC+VG
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEAN----EVIYNTIINGLCKVG 568
Query: 173 ETGAALQLLRQIEEEHT---DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
+T A ++L+ + +E YN+II + A + Y EM SP+V T+
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTF 628
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
+LI GFC ++ A+ + MK +K D+ LI CK+ +K A ++ + + +
Sbjct: 629 TSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPE 688
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
+ PNV +YN+LI G+ + +M A L M G++ D+ TY MI L ++
Sbjct: 689 LGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINL 748
Query: 350 AMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
A L+ + I PD + +L+ G ++ A +L EM
Sbjct: 749 ASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 181/448 (40%), Gaps = 45/448 (10%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
AV F M+ + P + NN+L SLVR N A + ++ L G+A D T +L+
Sbjct: 188 AVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMR 247
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK---- 148
+ A + +++ R +PD + ++ C ++ A++ +++ K
Sbjct: 248 ASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVP 307
Query: 149 ------------------------------GFQFQVDRVSVTYRFLINELCEVGETGAAL 178
GF + ++ T L+N C+ E G AL
Sbjct: 308 ASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATS--LVNGYCKGNELGKAL 365
Query: 179 QLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGF 236
L ++EEE D M++ +++ C++ + A + Y M RI+P +T+I G
Sbjct: 366 DLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGC 425
Query: 237 CAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNV 296
A+ FN E+ C+ + CK+ KV A S + M + +EPNV
Sbjct: 426 LKAESPEAALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNV 484
Query: 297 FIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHY 356
YN ++ +C + M AR + M +G+ P+ TY+I+I + A + +
Sbjct: 485 VFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQ 544
Query: 357 MDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG------IAYTSKLDAICNDY 410
M+ + + + Y+ +I G + A +L + +Y S +D
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604
Query: 411 NFDDEIEKFMRYKETGGDADFLIASHIV 438
+ D +E + E G + + + ++
Sbjct: 605 DTDSAVETYREMSENGKSPNVVTFTSLI 632
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 178/399 (44%), Gaps = 43/399 (10%)
Query: 31 VNAVSSFHNMLSMRPAPP-ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTI 89
V+A +SF M+ + P + +NN++ + RM + A S+ ++ KG+ P+ T +I
Sbjct: 465 VDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSI 524
Query: 90 LINCF-----------------------------------CHLGRMNYAFSVLGKILK-R 113
LI+ F C +G+ + A +L ++K +
Sbjct: 525 LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEK 584
Query: 114 AYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGE 173
Y T+ +++ G G+ SA+ + ++ G V VT+ LIN C+
Sbjct: 585 RYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNV----VTFTSLINGFCKSNR 640
Query: 174 TGAALQLLRQIE--EEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNT 231
AL++ +++ E D+ Y +I C+ + AY L++E+ + P+V YN+
Sbjct: 641 MDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNS 700
Query: 232 LIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKAS 291
LI GF G++ A+ + M + I D+ T +I L K+ + A+ + + ++
Sbjct: 701 LISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLG 760
Query: 292 VEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAM 351
+ P+ ++ L++G Q KA + M + VTP+V Y+ +I+ ++EA
Sbjct: 761 IVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAF 820
Query: 352 SLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
L M K I D +++L+ G + P I+ LA
Sbjct: 821 RLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKISSLA 859
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 129/311 (41%), Gaps = 38/311 (12%)
Query: 90 LINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKG 149
L+N + RM+YA G ++ R P + ++ L +RS N D+ K
Sbjct: 175 LLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSL-----VRS--NLIDEAKE-- 225
Query: 150 FQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSD 209
+ N++ +G G ++ Q+ ++++ ++ +
Sbjct: 226 --------------IYNKMVLIGVAG-----------DNVTTQL---LMRASLRERKPEE 257
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME-NIKPDVSTCDPLI 268
A ++ ++ + PD ++ + C L A+ M+ + + T +I
Sbjct: 258 AVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVI 317
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
A KE +++A V+ M+ + +V +L++GYC N++ KA L + M G+
Sbjct: 318 VAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLA 377
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINL 388
PD +++M+ W C + M++A+ + M I P + +I+G L A+ +
Sbjct: 378 PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEI 437
Query: 389 LAEMCSNGIAY 399
+ + IA+
Sbjct: 438 FNDSFESWIAH 448
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 98/238 (41%), Gaps = 6/238 (2%)
Query: 192 QMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNV 251
+ +N ++ + +K + A D + M+ +++ P V N ++ + +A +N
Sbjct: 170 RAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNK 229
Query: 252 MKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQ 311
M + + D T L+ A +ERK ++A + ++ EP+ +++ + C
Sbjct: 230 MVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPD 289
Query: 312 MTKARFLSHTMATR-GVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
+ A L M + GV TY +I M+EA+ + M I +
Sbjct: 290 LVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAAT 349
Query: 371 ILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLDAICNDYNFDDEIEKFMRYK 423
L+ G+ A++L M G+A ++ ++ C + + IE +MR K
Sbjct: 350 SLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMK 407
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 172/396 (43%), Gaps = 11/396 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+ F M R P N +L ++ + + G P + T I+I+
Sbjct: 211 AIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMID 270
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C C G + A + ++ R PDT +++ G G + + F +++K +
Sbjct: 271 CMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEP 330
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDA 210
V +TY LIN C+ G+ L+ R+++ +V Y+T++ + C++ + A
Sbjct: 331 DV----ITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA 386
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
Y +M + P+ +TY +LI C G L A N M ++ +V T LI
Sbjct: 387 IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDG 446
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
LC ++K+A + M A V PN+ YN LI G+ M +A L + + RG+ PD
Sbjct: 447 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
+ Y I LC+ ++ A + + M IK ++ Y+ L++ + + ++LL
Sbjct: 507 LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 566
Query: 391 EMCSNGIAYTSK-----LDAICNDYNFDDEIEKFMR 421
EM I T +D +C + ++ F R
Sbjct: 567 EMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 142/319 (44%), Gaps = 6/319 (1%)
Query: 81 APDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAIN 140
P L + LG + A K+ + P T + L+ G+
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 141 FHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTII 198
F D+ G + V TY +I+ +C+ G+ AA L +++ D YN++I
Sbjct: 249 FFKDMIGAGARPTV----FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 199 KSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
+ + D + EM PDV TYN LI FC G+L + F+ MK +K
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFL 318
P+V + L+ A CKE ++QA M + + PN + Y +LID C I ++ A L
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 319 SHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLN 378
+ M GV +V TY +I LC + M EA LF MD + P+ +Y+ LI G++
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 379 LPHYMHAINLLAEMCSNGI 397
+ A+ LL E+ GI
Sbjct: 485 AKNMDRALELLNELKGRGI 503
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 167/367 (45%), Gaps = 11/367 (2%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P F+ + L+ + A+ +++ + P + L++ F LG+ +
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
++ +P ++ +C G++ +A +++K +G +VTY +I
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD----TVTYNSMI 304
Query: 166 NELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
+ +VG + ++++ DV YN +I C+ + + Y EM +
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
P+V +Y+TL+ FC G +++A+ F+ M+ + P+ T LI A CK + A +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
M++ VE NV Y LIDG C +M +A L M T GV P++ +YN +I
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM--C---SNGIA 398
+ MD A+ L + + + IKPD Y I G +L A ++ EM C +N +
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 399 YTSKLDA 405
YT+ +DA
Sbjct: 545 YTTLMDA 551
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 166/378 (43%), Gaps = 12/378 (3%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+ V F M M P + +N ++ + P + ++++ G+ P++ + + L+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ FC G M A + + P+ T+L+ C G + A +++ G +
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSD 209
+ V VTY LI+ LC+ A +L +++ ++ YN +I + K +
Sbjct: 435 WNV----VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 490
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A +L NE+ + I PD+ Y T I+G C+ ++ A N MK IK + L+
Sbjct: 491 ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMD 550
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA-RFLSHTMATRGVT 328
A K + ++ M + +E V + LIDG C ++KA + + G+
Sbjct: 551 AYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ 610
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINL 388
+ + MI LC N ++ A +LF M K + PD Y+ L++G + + A+ L
Sbjct: 611 ANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALAL 670
Query: 389 LAEMCSNG-----IAYTS 401
+M G +AYTS
Sbjct: 671 RDKMAEIGMKLDLLAYTS 688
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 150/337 (44%), Gaps = 7/337 (2%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
A+ + +M + P + +++ + ++ + A L ++ G+ ++ T T LI
Sbjct: 385 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 444
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ C RM A + GK+ P+ + L+ G + A+ +++K +G +
Sbjct: 445 DGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK 504
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQ--MYNTIIKSMCEDKCVSD 209
+ + Y I LC + + AA ++ +++E +Y T++ + + ++
Sbjct: 505 PDL----LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME-NIKPDVSTCDPLI 268
L +EM I V T+ LI G C + KAV +FN + + ++ + + +I
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
LCK+ +V+ A ++ M++ + P+ Y +L+DG + +A L MA G+
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPD 365
D+ Y ++ L N + +A S M + I PD
Sbjct: 681 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 106/266 (39%), Gaps = 42/266 (15%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F M + P + +N ++ V+ + A+ L +L+ +GI PD+ I C
Sbjct: 460 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 519
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
L ++ A V+ ++ + + ++ TTLM +G ++ D++K + ++
Sbjct: 520 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK----ELDIEV 575
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEE---HTDVQMYNTIIKSMCEDKCVSDAYDL 213
VT+ LI+ LC+ A+ +I + + ++ +I +C+D V A L
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635
Query: 214 YNEMLLKRISPD-----------------------------------VFTYNTLIYGFCA 238
+ +M+ K + PD + Y +L++G
Sbjct: 636 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 695
Query: 239 GGQLRKAVGFFNVMKMENIKPDVSTC 264
QL+KA F M E I PD C
Sbjct: 696 CNQLQKARSFLEEMIGEGIHPDEVLC 721
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 169/376 (44%), Gaps = 24/376 (6%)
Query: 8 FLSIPSLFMRYHSHSPRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPT 67
LSI + R H RPF +++ FH M P + +L LV N
Sbjct: 89 LLSICRGYGRVH----RPF-----DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNL 139
Query: 68 AVSLSQQLELKGIAPDIATLTILINCFC-HLGRMNYAFSVLGKILKRAYQPDTTALTTLM 126
A + + G+ P +A+L +LI C + G ++ + ++ KR PD+ TL+
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 127 KGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE 186
GLC G I A ++ K V VTY LIN LC A++ L +++
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTV----VTYTSLINGLCGSKNVDEAMRYLEEMKS 255
Query: 187 E--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRK 244
+ +V Y++++ +C+D A +L+ M+ + P++ TY TLI G C ++++
Sbjct: 256 KGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQE 315
Query: 245 AVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYN---- 300
AV + M ++ +KPD +I C K ++A + + MI + PN +N
Sbjct: 316 AVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVK 375
Query: 301 ---TLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYM 357
++ G C N ++A L +M +RG++ +V T ++ LC +A+ L +
Sbjct: 376 TSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEI 434
Query: 358 DLKDIKPDAETYSILI 373
P T+ +LI
Sbjct: 435 VTDGCIPSKGTWKLLI 450
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 107/208 (51%), Gaps = 1/208 (0%)
Query: 191 VQMYNTIIKSMCE-DKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
V N +IK++C D V ++ EM + PD +TY TLI G C G++ +A F
Sbjct: 156 VASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLF 215
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
M ++ P V T LI+ LC + V +A + M +EPNVF Y++L+DG C
Sbjct: 216 TEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKD 275
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
+ +A L M RG P++ TY +I+ LC + EA+ L M+L+ +KPDA Y
Sbjct: 276 GRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLY 335
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGI 397
+I G+ + + A N L EM GI
Sbjct: 336 GKVISGFCAISKFREAANFLDEMILGGI 363
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 152/331 (45%), Gaps = 13/331 (3%)
Query: 50 TQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS---V 106
+ F ++ LV N + A L +++++ + + IL++ GR++ F V
Sbjct: 52 SSFGYMVLRLVSANKFKAAEDLIVRMKIENC---VVSEDILLSICRGYGRVHRPFDSLRV 108
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
K+ P A T++ L ++ A F+ +++ G V ++V LI
Sbjct: 109 FHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNV----LIK 164
Query: 167 ELCE-VGETGAALQLLRQIEEEHTDVQ--MYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
LC G A L++ ++ + D Y T+I +C + +A L+ EM+ K +
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
P V TY +LI G C + +A+ + MK + I+P+V T L+ LCK+ + QA +
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
M+ PN+ Y TLI G C ++ +A L M +G+ PD Y +IS C
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCA 344
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAETYSILIE 374
+ EA + M L I P+ T++I ++
Sbjct: 345 ISKFREAANFLDEMILGGITPNRLTWNIHVK 375
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 6/228 (2%)
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
D+ ++++M P Y T++ QL A F+ M+ + P V++ + LI
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 269 HALCK-ERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGV 327
ALC+ + V + M K +P+ + Y TLI G C ++ +A+ L M +
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 328 TPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAIN 387
P V TY +I+ LC S +DEAM M K I+P+ TYS L++G + A+
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 388 LLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYKETGGDAD 430
L M + G + YT+ + +C + + +E R G D
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPD 331
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 162/384 (42%), Gaps = 45/384 (11%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A + ++ ML +P + F ++ L + A + + +GI+P+ T TILI+
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C G + A + ++ PD+ A L+ G C G + A + GF
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDA 210
+ Y LI+ L A +L + +++ D+ +Y +I+ + + + DA
Sbjct: 302 GLR----GYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDA 357
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
L + M K ISPD + YN +I C G L + M PD T LI +
Sbjct: 358 LKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICS 417
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTM-------- 322
+C+ V++A + + K+ P+V +N LIDG C ++ +AR L H M
Sbjct: 418 MCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASL 477
Query: 323 -------------------------------ATRGVTPDVHTYNIMISWLCTSNMMDEAM 351
A G +PD+ +YN++I+ C + +D A+
Sbjct: 478 FLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGAL 537
Query: 352 SLFHYMDLKDIKPDAETYSILIEG 375
L + + LK + PD+ TY+ LI G
Sbjct: 538 KLLNVLQLKGLSPDSVTYNTLING 561
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 172/405 (42%), Gaps = 27/405 (6%)
Query: 30 AVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTI 89
A +A F+ M + P N +L ++ A L + E G + +
Sbjct: 249 ADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSS 308
Query: 90 LINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKG 149
LI+ R AF + +LK+ +PD T L++GL G+I A+ + +KG
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 150 FQFQVDRVSVTYRFLINELCEVG--ETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCV 207
+ + Y +I LC G E G +LQL E D + +I SMC + V
Sbjct: 369 ----ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLV 424
Query: 208 SDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPL 267
+A +++ E+ SP V T+N LI G C G+L++A + KME +P S L
Sbjct: 425 REAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLH--KMEVGRP-ASLFLRL 481
Query: 268 IHA-------LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSH 320
H+ + + + +A +A P++ YN LI+G+C + A L +
Sbjct: 482 SHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 321 TMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLP 380
+ +G++PD TYN +I+ L +EA LF+ D D + Y L+
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKD--DFRHSPAVYRSLMTWSCRKR 599
Query: 381 HYMHAINLLAEMCSNGIAYTSKLDAICNDYNFDDEIEKFMRYKET 425
+ A NL + Y K+ C D +EIE+ + ET
Sbjct: 600 KVLVAFNLW-------MKYLKKIS--CLDDETANEIEQCFKEGET 635
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 162/372 (43%), Gaps = 12/372 (3%)
Query: 73 QQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLN 132
++L+ G++ D +LI+ + +G A G++ + +PD +++ + +
Sbjct: 116 EELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILR-VMMR 174
Query: 133 GEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQ 192
E+ + F V + + T+ L++ L + G T A ++ +
Sbjct: 175 EEVFFMLAFA--VYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPN 232
Query: 193 --MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFN 250
Y +I +C+ DA L+ EM PD +N L+ GFC G++ +A
Sbjct: 233 RVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLR 292
Query: 251 VMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLIN 310
+ + + + LI L + R+ QA + A M+K +++P++ +Y LI G
Sbjct: 293 LFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAG 352
Query: 311 QMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
++ A L +M ++G++PD + YN +I LC +++E SL M + PDA T++
Sbjct: 353 KIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHT 412
Query: 371 ILIEGWLNLPHYMHAINLLAEM----CSNGIA-YTSKLDAICNDYNFDDEIEKFMRYKET 425
ILI A + E+ CS +A + + +D +C E + E
Sbjct: 413 ILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGEL-KEARLLLHKMEV 471
Query: 426 GGDAD-FLIASH 436
G A FL SH
Sbjct: 472 GRPASLFLRLSH 483
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 6/219 (2%)
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
+ +I + ED + E+ +S D + + LI + G KAV F MK
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 254 MENIKPDVSTCDPLIHALCKERK-VKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQM 312
+ +PDV T + ++ + +E A +V M+K + PN++ + L+DG +
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 313 TKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSIL 372
+ A+ + M RG++P+ TY I+IS LC D+A LF+ M PD+ ++ L
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 373 IEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAI 406
++G+ L + A LL +G Y+S +D +
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGL 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 113/303 (37%), Gaps = 79/303 (26%)
Query: 55 ILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRM-------------- 100
++ S+ R A + ++E G +P +AT LI+ C G +
Sbjct: 414 LICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR 473
Query: 101 ------------NYAFSVL---GKILKRAYQ-----------PDTTALTTLMKGLCLNGE 134
N +F + G ILK AY+ PD + L+ G C G+
Sbjct: 474 PASLFLRLSHSGNRSFDTMVESGSILK-AYRDLAHFADTGSSPDIVSYNVLINGFCRAGD 532
Query: 135 IRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMY 194
I A+ + ++ KG SVTY LIN L VG A +L ++ +Y
Sbjct: 533 IDGALKLLNVLQLKGLSPD----SVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVY 588
Query: 195 NTIIKSMCEDKCVSDAYDLY--------------------------NEMLLKRI-----S 223
+++ C + V A++L+ E L+R+
Sbjct: 589 RSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTR 648
Query: 224 PDVFT---YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQA 280
D T Y + G C G+ +A+ F+V++ + I +C LIH LCK ++ A
Sbjct: 649 KDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAA 708
Query: 281 NSV 283
V
Sbjct: 709 IEV 711
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 107/269 (39%), Gaps = 20/269 (7%)
Query: 13 SLFMRYHSHSPRPF-----SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPT 67
SLF+R R F S + A + +P I +N ++ R
Sbjct: 476 SLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDG 535
Query: 68 AVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMK 127
A+ L L+LKG++PD T LIN +GR AF + K ++ +LM
Sbjct: 536 ALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMT 593
Query: 128 GLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV---GETGAALQLLRQI 184
C ++ A N + + ++S NE+ + GET AL+ L ++
Sbjct: 594 WSCRKRKVLVAFNL--------WMKYLKKISCLDDETANEIEQCFKEGETERALRRLIEL 645
Query: 185 EEEHTDVQM--YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQL 242
+ ++ + Y + +C+ +A +++ + K+I + LI+G C QL
Sbjct: 646 DTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQL 705
Query: 243 RKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
A+ F N K C+ L+ +L
Sbjct: 706 DAAIEVFLYTLDNNFKLMPRVCNYLLSSL 734
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 160/363 (44%), Gaps = 12/363 (3%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P + ++ V+ N + Q + P + T LI F + + +
Sbjct: 130 GPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLT 189
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+ ++ + Y+P TTL++G G + SA++ D++K+ + V Y I
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI----VLYNVCI 245
Query: 166 NELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
+ +VG+ A + +IE D Y ++I +C+ + +A +++ + R
Sbjct: 246 DSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV 305
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
P + YNT+I G+ + G+ +A + + P V + ++ L K KV +A V
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKV 365
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
M K PN+ YN LID C ++ A L +M G+ P+V T NIM+ LC
Sbjct: 366 FEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCK 424
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMC-----SNGIA 398
S +DEA ++F MD K PD T+ LI+G + A + +M +N I
Sbjct: 425 SQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV 484
Query: 399 YTS 401
YTS
Sbjct: 485 YTS 487
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 184/423 (43%), Gaps = 38/423 (8%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
AP ++ +N ++ L R TA L ++ G+ P++ T+ I+++ C +++ A +
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHD-----DVKAKGFQF-------- 152
+ ++ + PD +L+ GL G + A ++ D + +
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 493
Query: 153 ---QVDRVSVTYRFLINELC---------------EVGETGAALQLLRQIEEEH--TDVQ 192
+ + Y+ +IN+ C + GE + +I+ D +
Sbjct: 494 NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 553
Query: 193 MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
Y+ +I + + ++ Y+L+ M + D YN +I GFC G++ KA M
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 253 KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQM 312
K + +P V T +I L K ++ +A + +E NV IY++LIDG+ + ++
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 313 TKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSIL 372
+A + + +G+TP+++T+N ++ L + ++EA+ F M P+ TY IL
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 373 IEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYKETGG 427
I G + + A EM G I+YT+ + + N + F R+K GG
Sbjct: 734 INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793
Query: 428 DAD 430
D
Sbjct: 794 VPD 796
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 146/324 (45%), Gaps = 6/324 (1%)
Query: 81 APDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAIN 140
+PD+ L ++C G ++ +I R + PD + + L+ GL G
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 141 FHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTD--VQMYNTII 198
+K +G + Y +I+ C+ G+ A QLL +++ + + V Y ++I
Sbjct: 574 LFYSMKEQGCVLD----TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 199 KSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
+ + + +AY L+ E KRI +V Y++LI GF G++ +A + + +
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFL 318
P++ T + L+ AL K ++ +A +M + PN Y LI+G C + + KA
Sbjct: 690 PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749
Query: 319 SHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLN 378
M +G+ P +Y MIS L + + EA +LF PD+ Y+ +IEG N
Sbjct: 750 WQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSN 809
Query: 379 LPHYMHAINLLAEMCSNGIAYTSK 402
M A +L E G+ +K
Sbjct: 810 GNRAMDAFSLFEETRRRGLPIHNK 833
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 166/411 (40%), Gaps = 28/411 (6%)
Query: 25 PFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGI---A 81
P+ A N +S+ LS +P P ++G L R+ A+ + E +
Sbjct: 47 PWGPSAENTLSA----LSFKPQPEF-----VIGVLRRLKDVNRAIEYFRWYERRTELPHC 97
Query: 82 PDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINF 141
P+ +L+ C + +LG++ + P ++ G ++R
Sbjct: 98 PESYNSLLLVMARCR--NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGY-- 153
Query: 142 HDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE--EHTDVQMYNTIIK 199
DV +F+ Y LI V + L L +Q++E V ++ T+I+
Sbjct: 154 --DVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIR 211
Query: 200 SMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKP 259
++ V A L +EM + D+ YN I F G++ A FF+ ++ +KP
Sbjct: 212 GFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKP 271
Query: 260 DVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLS 319
D T +I LCK ++ +A + + K P + YNT+I GY + +A L
Sbjct: 272 DEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
Query: 320 HTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNL 379
+G P V YN +++ L +DEA+ +F M KD P+ TY+ILI+
Sbjct: 332 ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRA 390
Query: 380 PHYMHAINLLAEMCSNGIAYTSK-----LDAICNDYNFDDEIEKF--MRYK 423
A L M G+ + +D +C D+ F M YK
Sbjct: 391 GKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/445 (20%), Positives = 167/445 (37%), Gaps = 82/445 (18%)
Query: 40 MLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGR 99
M + P + + ++G+ +NH ++L QQ++ G P + T LI F GR
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 100 MNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSV 159
++ A S+L ++ + D + G++ A F +++A G + V
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD----EV 274
Query: 160 TYRFLINELCEVGETGAALQLLRQIEEEHT------------------------------ 189
TY +I LC+ A+++ +E+
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 190 -------DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQL 242
V YN I+ + + V +A ++ EM K +P++ TYN LI C G+L
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKL 393
Query: 243 RKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTL 302
A + M+ + P+V T + ++ LCK +K+ +A ++ M P+ + +L
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 303 IDGYCLINQMTKA------------------------RFLSH-----------TMATRGV 327
IDG + ++ A F +H M +
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Query: 328 TPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAIN 387
+PD+ N + + + ++ ++F + + PDA +YSILI G +
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 388 LLAEMCSNGI-----AYTSKLDAIC 407
L M G AY +D C
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFC 598
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 140/316 (44%), Gaps = 6/316 (1%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F + + R P ++ ++ L++ L ++ +G D I+I+ FC
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
G++N A+ +L ++ + ++P +++ GL + A ++ K+K + V
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV-- 657
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMY--NTIIKSMCEDKCVSDAYDLY 214
V Y LI+ +VG A +L ++ ++ +Y N+++ ++ + + +++A +
Sbjct: 658 --VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCF 715
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
M + +P+ TY LI G C + KA F+ M+ + +KP + +I L K
Sbjct: 716 QSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKA 775
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY 334
+ +A ++ P+ YN +I+G N+ A L RG+ T
Sbjct: 776 GNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTC 835
Query: 335 NIMISWLCTSNMMDEA 350
+++ L ++ +++A
Sbjct: 836 VVLLDTLHKNDCLEQA 851
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 5/223 (2%)
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+ + YD+ M + P Y TLI F A + F M+ +P V
Sbjct: 149 LREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTT 208
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
LI KE +V A S++ M +S++ ++ +YN ID + + ++ A H + G
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 268
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
+ PD TY MI LC +N +DEA+ +F +++ P Y+ +I G+ + + A
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 387 NLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYKE 424
+LL + G IAY L + D+ ++ F K+
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 114/247 (46%), Gaps = 7/247 (2%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + + +++ L +++ A L ++ + K I ++ + LI+ F +GR++ A+ +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
L +++++ P+ +L+ L EI A+ +K + + VTY LIN
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK----ELKCTPNQVTYGILIN 735
Query: 167 ELCEVGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
LC+V + A ++++++ Y T+I + + +++A L++ P
Sbjct: 736 GLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP 795
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
D YN +I G G + A F + + TC L+ L K ++QA ++V
Sbjct: 796 DSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA-AIV 854
Query: 285 AAMIKAS 291
A+++ +
Sbjct: 855 GAVLRET 861
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 184/404 (45%), Gaps = 31/404 (7%)
Query: 55 ILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRA 114
IL +M+ A+ ++ I D + + LGR+ AF +L ++ R
Sbjct: 359 ILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRG 418
Query: 115 YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGET 174
PD TTL+ G CL G++ A++ D++ G + +TY L++ L G
Sbjct: 419 IVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDL----ITYNVLVSGLARNGHE 474
Query: 175 GAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL 232
L++ +++ E + + II+ +C + V +A D ++ L++ P+ +
Sbjct: 475 EEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSS--LEQKCPE--NKASF 530
Query: 233 IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASV 292
+ G+C G +KA F ++ K S L +LC E +++A+ V+ M V
Sbjct: 531 VKGYCEAGLSKKAYKAFVRLEYPLRK---SVYIKLFFSLCIEGYLEKAHDVLKKMSAYRV 587
Query: 293 EPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMS 352
EP + +I +C +N + +A+ L TM RG+ PD+ TY IMI C N + +A S
Sbjct: 588 EPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAES 647
Query: 353 LFHYMDLKDIKPDAETYSILIEGWLNLPHYMH-------------AINLLAEMCSNGIA- 398
LF M + IKPD TY++L++ +L L H A +L E + GI
Sbjct: 648 LFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGL 707
Query: 399 ----YTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
YT +D C N + E F R ++G + D + + ++
Sbjct: 708 DVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLI 751
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 159/371 (42%), Gaps = 33/371 (8%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+N +L ++ A L Q+++ +GI PD+ T LI+ +C G++ A ++ +++
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
PD L+ GL NG + ++ +KA+G + +VT +I LC
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPN----AVTNSVIIEGLCFA 506
Query: 172 GETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEM---LLKRISPDVFT 228
+ A +E++ + + + +K CE AY + + L K +
Sbjct: 507 RKVKEAEDFFSSLEQKCPENKA--SFVKGYCEAGLSKKAYKAFVRLEYPLRKSV------ 558
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
Y L + C G L KA M ++P S C +I A CK V++A + M+
Sbjct: 559 YIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMV 618
Query: 289 KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC------ 342
+ + P++F Y +I YC +N++ KA L M RG+ PDV TY +++
Sbjct: 619 ERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEH 678
Query: 343 --TSNMMDE-----AMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSN 395
T ++ E A + I D Y++LI+ + + A L M +
Sbjct: 679 HETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDS 738
Query: 396 G-----IAYTS 401
G +AYT+
Sbjct: 739 GLEPDMVAYTT 749
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 148/329 (44%), Gaps = 9/329 (2%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
I N ++ + ++L +QL+ G+ + T I++ C G + A +L
Sbjct: 181 IKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLI 240
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
+ T + GLC+ GE A+ ++ + + D + ++
Sbjct: 241 E------NESVFGYKTFINGLCVTGETEKAVALILELIDRKY-LAGDDLRAVLGMVVRGF 293
Query: 169 CEVGETGAALQLLRQIEEEHTDVQMYN--TIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
C + AA ++ ++EE + +Y +I C++ + +A ++ML K + +
Sbjct: 294 CNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNC 353
Query: 227 FTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAA 286
+ ++ +C +A+ F + NI D + AL K +V++A ++
Sbjct: 354 VIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQE 413
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNM 346
M + P+V Y TLIDGYCL ++ A L M G++PD+ TYN+++S L +
Sbjct: 414 MKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGH 473
Query: 347 MDEAMSLFHYMDLKDIKPDAETYSILIEG 375
+E + ++ M + KP+A T S++IEG
Sbjct: 474 EEEVLEIYERMKAEGPKPNAVTNSVIIEG 502
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 109/263 (41%), Gaps = 32/263 (12%)
Query: 163 FLINELCEVGETGAALQLLRQIEE------EHTDVQMYNTIIKSMCEDKCVSDAYDLYNE 216
FL+N + E G+ G + L +Q+++ E+T Y ++K++C + +A L E
Sbjct: 186 FLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYT----YAIVVKALCRKGNLEEAAMLLIE 241
Query: 217 MLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPL-------IH 269
+ VF Y T I G C G+ KAV +E I D L +
Sbjct: 242 ------NESVFGYKTFINGLCVTGETEKAVALI----LELIDRKYLAGDDLRAVLGMVVR 291
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
C E K+K A SV+ M + +V+ +ID YC + +A M +G+
Sbjct: 292 GFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKV 351
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLL 389
+ ++++ C +M EA+ F +I D Y++ + L A LL
Sbjct: 352 NCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELL 411
Query: 390 AEMCSNGIA-----YTSKLDAIC 407
EM GI YT+ +D C
Sbjct: 412 QEMKDRGIVPDVINYTTLIDGYC 434
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 34/222 (15%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
+H+ + +S++ R P + ++G+ ++N+ A L + +G+ PD+ T
Sbjct: 575 AHDVLKKMSAY------RVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFT 628
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
TI+I+ +C L + A S+ + +R +PD T L L+ ++ H+
Sbjct: 629 YTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVL-----LDRYLKLDPEHHETCS 683
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCED 204
+G EVG+ A+ ++LR+ DV Y +I C+
Sbjct: 684 VQG--------------------EVGKRKAS-EVLREFSAAGIGLDVVCYTVLIDRQCKM 722
Query: 205 KCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAV 246
+ A +L++ M+ + PD+ Y TLI + G + AV
Sbjct: 723 NNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAV 764
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 116/209 (55%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
DV + I+ +C+D +A +L+ EM K I P+V TYN +I FC G+ A
Sbjct: 9 DVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLL 68
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
M + I PD+ T LI+A KERKV +A + M++ S+ P YN++IDG+C
Sbjct: 69 RHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQ 128
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
+++ A+ + +MA++G +PDV T++ +I+ C + +D M +F M + I + TY
Sbjct: 129 DRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 188
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGIA 398
+ LI G+ + A +LL EM S G+A
Sbjct: 189 TTLIHGFCQVGDLDAAQDLLNEMISCGVA 217
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 6/241 (2%)
Query: 116 QPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETG 175
+ D T ++ LC +G +A N ++ KG V +TY +I+ C G
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNV----LTYNCMIDSFCHSGRWS 62
Query: 176 AALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLI 233
A QLLR + E+ D+ ++ +I + +++ VS+A ++Y EML I P TYN++I
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 234 YGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVE 293
GFC ++ A + M + PDV T LI+ CK ++V + M + +
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 294 PNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSL 353
N Y TLI G+C + + A+ L + M + GV PD T++ M++ LC+ + +A ++
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Query: 354 F 354
Sbjct: 243 L 243
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 108/231 (46%), Gaps = 2/231 (0%)
Query: 164 LINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKR 221
+++ LC+ G A L ++ E+ +V YN +I S C SDA L M+ K+
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
I+PD+ T++ LI F ++ +A + M +I P T + +I CK+ +V A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
++ +M P+V ++TLI+GYC ++ + M RG+ + TY +I
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 342 CTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
C +D A L + M + PD T+ ++ G + A +L ++
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 119/239 (49%), Gaps = 6/239 (2%)
Query: 55 ILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRA 114
I+ L + ++ A +L ++ KGI P++ T +I+ FCH GR + A +L ++++
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 115 YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGET 174
PD + L+ ++ A +++ + ++ + ++TY +I+ C+
Sbjct: 76 INPDIVTFSALINAFVKERKVSEA----EEIYKEMLRWSIFPTTITYNSMIDGFCKQDRV 131
Query: 175 GAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL 232
A ++L + + DV ++T+I C+ K V + +++ EM + I + TY TL
Sbjct: 132 DDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 191
Query: 233 IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKAS 291
I+GFC G L A N M + PD T ++ LC ++++++A +++ + K+
Sbjct: 192 IHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 6/225 (2%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
+NA + F M P + +N ++ S + A L + + K I PDI T + L
Sbjct: 27 INAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSAL 86
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
IN F +++ A + ++L+ + P T +++ G C + A D + +KG
Sbjct: 87 INAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGC 146
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVS 208
V VT+ LIN C+ +++ ++ + Y T+I C+ +
Sbjct: 147 SPDV----VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLD 202
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
A DL NEM+ ++PD T++ ++ G C+ +LRKA ++
Sbjct: 203 AAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 5/197 (2%)
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
I DV ++ C G A F M + I P+V T + +I + C + A+
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
++ MI+ + P++ ++ LI+ + ++++A + M + P TYN MI
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 342 CTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM-----CSNG 396
C + +D+A + M K PD T+S LI G+ + + + EM +N
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 397 IAYTSKLDAICNDYNFD 413
+ YT+ + C + D
Sbjct: 186 VTYTTLIHGFCQVGDLD 202
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 5/180 (2%)
Query: 252 MKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQ 311
M +IK DV ++ LCK+ A ++ M + + PNV YN +ID +C +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 312 MTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSI 371
+ A L M + + PD+ T++ +I+ + EA ++ M I P TY+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 372 LIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYKETG 426
+I+G+ A +L M S G + +++ ++ C D+ +E F G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
+ ML P +N+++ + + A + + KG +PD+ T + LIN +C
Sbjct: 103 YKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK 162
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
R++ + ++ +R +T TTL+ G C G++ +A + +++ + G V
Sbjct: 163 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG----VAP 218
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIE--EEH 188
+T+ ++ LC E A +L ++ E+H
Sbjct: 219 DYITFHCMLAGLCSKKELRKAFAILEDLQKSEDH 252
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 169/344 (49%), Gaps = 9/344 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+N + SL + + A + + ++ G++P+ L L++ F G++++A ++L +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+ + + +L+ L + A+ D+ +FQ + T+ LI LC V
Sbjct: 166 E--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDE----HLRFQSCNDTKTFNILIRGLCGV 219
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRI-SPDVFT 228
G+ AL+LL + D+ YNT+I+ C+ ++ A +++ ++ + SPDV T
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
Y ++I G+C G++R+A + M I P T + L+ K ++ A + MI
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 289 KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMD 348
P+V + +LIDGYC + Q+++ L M RG+ P+ TY+I+I+ LC N +
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 349 EAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
+A L + KDI P Y+ +I+G+ A ++ EM
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 156/325 (48%), Gaps = 9/325 (2%)
Query: 53 NNILGSLVRMNHYPTAVSL-SQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
N++L +LV+++ A+ L + L + D T ILI C +G+ A +LG +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQS-CNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+PD TL++G C + E+ A DVK+ G D VTY +I+ C+
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCSPD--VVTYTSMISGYCKA 290
Query: 172 GETGAALQLLR---QIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFT 228
G+ A LL ++ T+V +N ++ + + A ++ +M+ PDV T
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVT-FNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT 349
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
+ +LI G+C GQ+ + + M + P+ T LI+ALC E ++ +A ++ +
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLA 409
Query: 289 KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMD 348
+ P F+YN +IDG+C ++ +A + M + PD T+ I+I C M
Sbjct: 410 SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF 469
Query: 349 EAMSLFHYMDLKDIKPDAETYSILI 373
EA+S+FH M PD T S L+
Sbjct: 470 EAVSIFHKMVAIGCSPDKITVSSLL 494
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 146/325 (44%), Gaps = 7/325 (2%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A+ F L + FN ++ L + A+ L + G PDI T LI
Sbjct: 189 DAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 92 NCFCHLGRMNYAFSVLGKILKRAY-QPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
FC +N A + + + PD T+++ G C G++R A + DD+
Sbjct: 249 QGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM----L 304
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVS 208
+ + +VT+ L++ + GE A ++ ++ DV + ++I C VS
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
+ L+ EM + + P+ FTY+ LI C +L KA + ++I P +P+I
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
CK KV +AN +V M K +P+ + LI G+C+ +M +A + H M G +
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS 484
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSL 353
PD T + ++S L + M EA L
Sbjct: 485 PDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 126/268 (47%), Gaps = 16/268 (5%)
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH------TDVQMYNTIIKSMCEDK 205
F+V+ + L+N L ++ A++L +EH D + +N +I+ +C
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLF----DEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 206 CVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENI-KPDVSTC 264
A +L M PD+ TYNTLI GFC +L KA F +K ++ PDV T
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 265 DPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMAT 324
+I CK K+++A+S++ M++ + P +N L+DGY +M A + M +
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 325 RGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMH 384
G PDV T+ +I C + + L+ M+ + + P+A TYSILI N +
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400
Query: 385 AINLLAEMCSNGI-----AYTSKLDAIC 407
A LL ++ S I Y +D C
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFC 428
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 169/344 (49%), Gaps = 9/344 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+N + SL + + A + + ++ G++P+ L L++ F G++++A ++L +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+ + + +L+ L + A+ D+ +FQ + T+ LI LC V
Sbjct: 166 E--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDE----HLRFQSCNDTKTFNILIRGLCGV 219
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRI-SPDVFT 228
G+ AL+LL + D+ YNT+I+ C+ ++ A +++ ++ + SPDV T
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
Y ++I G+C G++R+A + M I P T + L+ K ++ A + MI
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 289 KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMD 348
P+V + +LIDGYC + Q+++ L M RG+ P+ TY+I+I+ LC N +
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 349 EAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
+A L + KDI P Y+ +I+G+ A ++ EM
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 156/325 (48%), Gaps = 9/325 (2%)
Query: 53 NNILGSLVRMNHYPTAVSL-SQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
N++L +LV+++ A+ L + L + D T ILI C +G+ A +LG +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQS-CNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+PD TL++G C + E+ A DVK+ G D VTY +I+ C+
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCSPD--VVTYTSMISGYCKA 290
Query: 172 GETGAALQLLR---QIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFT 228
G+ A LL ++ T+V +N ++ + + A ++ +M+ PDV T
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVT-FNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT 349
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
+ +LI G+C GQ+ + + M + P+ T LI+ALC E ++ +A ++ +
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLA 409
Query: 289 KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMD 348
+ P F+YN +IDG+C ++ +A + M + PD T+ I+I C M
Sbjct: 410 SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF 469
Query: 349 EAMSLFHYMDLKDIKPDAETYSILI 373
EA+S+FH M PD T S L+
Sbjct: 470 EAVSIFHKMVAIGCSPDKITVSSLL 494
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 146/325 (44%), Gaps = 7/325 (2%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A+ F L + FN ++ L + A+ L + G PDI T LI
Sbjct: 189 DAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 92 NCFCHLGRMNYAFSVLGKILKRAY-QPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
FC +N A + + + PD T+++ G C G++R A + DD+
Sbjct: 249 QGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM----L 304
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVS 208
+ + +VT+ L++ + GE A ++ ++ DV + ++I C VS
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
+ L+ EM + + P+ FTY+ LI C +L KA + ++I P +P+I
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
CK KV +AN +V M K +P+ + LI G+C+ +M +A + H M G +
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS 484
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSL 353
PD T + ++S L + M EA L
Sbjct: 485 PDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 126/268 (47%), Gaps = 16/268 (5%)
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH------TDVQMYNTIIKSMCEDK 205
F+V+ + L+N L ++ A++L +EH D + +N +I+ +C
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLF----DEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 206 CVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENI-KPDVSTC 264
A +L M PD+ TYNTLI GFC +L KA F +K ++ PDV T
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 265 DPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMAT 324
+I CK K+++A+S++ M++ + P +N L+DGY +M A + M +
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 325 RGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMH 384
G PDV T+ +I C + + L+ M+ + + P+A TYSILI N +
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400
Query: 385 AINLLAEMCSNGI-----AYTSKLDAIC 407
A LL ++ S I Y +D C
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFC 428
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 168/364 (46%), Gaps = 10/364 (2%)
Query: 40 MLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGR 99
M M P+P +N ++ L +N+ A+ L + GI P+ T I+++ C G
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 100 M-NYAFSVLGKIL--KRAYQP-DTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVD 155
+ N +L +IL +A P D T LM NG + A+ ++ K V
Sbjct: 242 IGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQK----NVP 297
Query: 156 RVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDL 213
SV Y +I LC G AA + + + + DV YNT+I ++C++ +A DL
Sbjct: 298 ADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Query: 214 YNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCK 273
+ M ++PD +Y +I G C G + +A F M ++ P+V + +I +
Sbjct: 358 HGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGR 417
Query: 274 ERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHT 333
A SV+ M+ V+PNV+ N LI GY ++ A ++ + M + + PD T
Sbjct: 418 YGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTT 477
Query: 334 YNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMC 393
YN+++ CT + A L+ M + +PD TY+ L+ G A +LL+ +
Sbjct: 478 YNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQ 537
Query: 394 SNGI 397
+ GI
Sbjct: 538 ATGI 541
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 178/399 (44%), Gaps = 14/399 (3%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + N++L L + + A L +++ G +P+ + LI C + ++ A +
Sbjct: 154 PGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYL 213
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAIN--FHDDVKAKGFQFQVDRVSVTYRFL 164
+ K +P+ ++ LC G I + + + + +D V T L
Sbjct: 214 FNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICT--IL 271
Query: 165 INELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRI 222
++ + G AL++ +++ +++ D +YN II+ +C + AY +M+ + +
Sbjct: 272 MDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGV 331
Query: 223 SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS 282
+PDVFTYNTLI C G+ +A M+ + PD + +I LC V +AN
Sbjct: 332 NPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANE 391
Query: 283 VVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC 342
+ +M+K+S+ P V ++N +IDGY + A + + M + GV P+V+T N +I
Sbjct: 392 FLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYV 451
Query: 343 TSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----I 397
+ +A + + M I PD TY++L+ L H A L EM G I
Sbjct: 452 KGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDII 511
Query: 398 AYTSKLDAICNDYNFDDEIEKFMRYKETGGDAD---FLI 433
YT + +C R + TG D FLI
Sbjct: 512 TYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLI 550
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 96/259 (37%), Gaps = 74/259 (28%)
Query: 191 VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVG--- 247
+ ++++I++ +C + A L +M+ + P + T+N L+ G C G + KA G
Sbjct: 121 LSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVR 180
Query: 248 --------------------------------FFNVMKMENIKPDVSTCDPLIHALC--- 272
FN M I+P+ TC+ ++HALC
Sbjct: 181 EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240
Query: 273 ------------------------------------KERKVKQANSVVAAMIKASVEPNV 296
K V QA V M + +V +
Sbjct: 241 VIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADS 300
Query: 297 FIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHY 356
+YN +I G C M A M RGV PDV TYN +IS LC DEA L
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGT 360
Query: 357 MDLKDIKPDAETYSILIEG 375
M + PD +Y ++I+G
Sbjct: 361 MQNGGVAPDQISYKVIIQG 379
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 125/287 (43%), Gaps = 54/287 (18%)
Query: 198 IKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENI 257
+ S+ E C + ++D Y++ L +++++ C G+L A+ M +
Sbjct: 102 LASLRESVCQTKSFD-YDDCL--------SIHSSIMRDLCLQGKLDAALWLRKKMIYSGV 152
Query: 258 KPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARF 317
P + T + L++ LCK +++A+ +V M + PN YNTLI G C +N + KA +
Sbjct: 153 IPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALY 212
Query: 318 LSHTMATRGVTPDVHTYNIMISWLCTSN------------------------------MM 347
L +TM G+ P+ T NI++ LC +M
Sbjct: 213 LFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILM 272
Query: 348 D---------EAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI- 397
D +A+ ++ M K++ D+ Y+++I G + + + A + +M G+
Sbjct: 273 DSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVN 332
Query: 398 ----AYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIVLR 440
Y + + A+C + FD+ + + GG A I+ ++++
Sbjct: 333 PDVFTYNTLISALCKEGKFDEACD-LHGTMQNGGVAPDQISYKVIIQ 378
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A+S + MLS P + N ++ V+ A + ++ I PD T +L+
Sbjct: 423 SALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLL 482
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
C LG + AF + ++L+R QPD T L++GLC G ++ A + ++A G
Sbjct: 483 GAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 169/387 (43%), Gaps = 10/387 (2%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F M+ + I +N ++ + + A L ++E KG+ PDI T LI+ +C
Sbjct: 191 FKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCK 250
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
A SV ++ + P+ + + G G +R A ++K V
Sbjct: 251 KSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-----DVTA 305
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEEHT---DVQMYNTIIKSMCEDKCVSDAYDL 213
VTY LI+ C + + AL+L R++ E V YN+I++ +CED + +A L
Sbjct: 306 NHVTYTTLIDGYCRMNDIDEALRL-REVMESRGFSPGVVTYNSILRKLCEDGRIREANRL 364
Query: 214 YNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCK 273
EM K+I PD T NTLI +C + AV M +K D+ + LIH CK
Sbjct: 365 LTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCK 424
Query: 274 ERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHT 333
+++ A + +MI+ P Y+ L+DG+ N+ + L RG+ DV
Sbjct: 425 VLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVAL 484
Query: 334 YNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMC 393
Y +I +C +D A LF M+ K + D+ ++ + + A L M
Sbjct: 485 YRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMY 544
Query: 394 SNGIAYTSKL-DAICNDYNFDDEIEKF 419
+ + KL +I Y D+++ +F
Sbjct: 545 NRRLMVNLKLYKSISASYAGDNDVLRF 571
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 160/367 (43%), Gaps = 5/367 (1%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+++ F + S P + +L SLV+ T + +++ G+ +I +L+
Sbjct: 151 DSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLV 210
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ G A +L ++ ++ PD TL+ C A++ D ++ G
Sbjct: 211 HACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVA 270
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQM-YNTIIKSMCEDKCVSDA 210
+ VTY I+ G A +L R+I+++ T + Y T+I C + +A
Sbjct: 271 PNI----VTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEA 326
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
L M + SP V TYN+++ C G++R+A M + I+PD TC+ LI+A
Sbjct: 327 LRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINA 386
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
CK + A V MI++ ++ +++ Y LI G+C + ++ A+ +M +G +P
Sbjct: 387 YCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPG 446
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
TY+ ++ N DE L + + + D Y LI L +A L
Sbjct: 447 YATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFE 506
Query: 391 EMCSNGI 397
M G+
Sbjct: 507 SMEKKGL 513
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 7/220 (3%)
Query: 226 VFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVA 285
VF++ +IY + G + ++ F ++ +KP + C L+++L K+R +
Sbjct: 135 VFSW-LMIY-YAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFK 192
Query: 286 AMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSN 345
M+K V N+ +YN L+ KA L M +GV PD+ TYN +IS C +
Sbjct: 193 KMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKS 252
Query: 346 MMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM----CSNGIAYTS 401
M EA+S+ M+ + P+ TY+ I G+ A L E+ +N + YT+
Sbjct: 253 MHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTT 312
Query: 402 KLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIVLRN 441
+D C N DE + E+ G + ++ + +LR
Sbjct: 313 LIDGYCR-MNDIDEALRLREVMESRGFSPGVVTYNSILRK 351
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 160/341 (46%), Gaps = 9/341 (2%)
Query: 38 HNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHL 97
+LS AP + +N ++ ++M + A L L I P I T LI+ C
Sbjct: 363 RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 98 GRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRV 157
G + A + ++ + PD TTL+KG NG + A +D++ KG + D
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK--PDGY 480
Query: 158 SVTYRFLINELCEVGETGAALQLLRQI---EEEHTDVQMYNTIIKSMCEDKCVSDAYDLY 214
+ T R + EL +G++ A +L ++ + D+ +YN I +C+ + A +
Sbjct: 481 AYTTR-AVGEL-RLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQ 538
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
++ + PD TY T+I G+ GQ + A ++ M + + P V T LI+ K
Sbjct: 539 RKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKA 598
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA-RFLSHTMATRGVTPDVHT 333
+++QA M K V PNV +N L+ G C + +A R+L M G+ P+ ++
Sbjct: 599 GRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLC-KMEEEGIPPNKYS 657
Query: 334 YNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIE 374
Y ++IS C +E + L+ M K+I+PD T+ L +
Sbjct: 658 YTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFK 698
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 146/313 (46%), Gaps = 5/313 (1%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
V A F ++ + P I +N ++ L + A L +++ + I PD+ T T L
Sbjct: 391 VEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 450
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
+ F G ++ A V ++L++ +PD A TT G G+ A H+++ A
Sbjct: 451 VKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVAT-- 508
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVS 208
+++ Y I+ LC+VG A++ R+I D Y T+I+ E+
Sbjct: 509 DHHAPDLTI-YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFK 567
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
A +LY+EML KR+ P V TY LIYG G+L +A + MK ++P+V T + L+
Sbjct: 568 MARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALL 627
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
+ +CK + +A + M + + PN + Y LI C + + L M + +
Sbjct: 628 YGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687
Query: 329 PDVHTYNIMISWL 341
PD +T+ + L
Sbjct: 688 PDGYTHRALFKHL 700
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 162/384 (42%), Gaps = 46/384 (11%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
FN ++ + + A ++ ++ GI P +T I I C GR++ A +L +
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
PD + TLM G G+ A DD++A + VTY LI+ LCE
Sbjct: 371 ----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSI----VTYNTLIDGLCES 422
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
G A +L ++ + DV Y T++K ++ +S A ++Y+EML K I PD + Y
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Query: 230 ------------------------------------NTLIYGFCAGGQLRKAVGFFNVMK 253
N I G C G L KA+ F +
Sbjct: 483 TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF 542
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
+ PD T +I + + K A ++ M++ + P+V Y LI G+ ++
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 314 KARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
+A S M RGV P+V T+N ++ +C + +DEA M+ + I P+ +Y++LI
Sbjct: 603 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Query: 374 EGWLNLPHYMHAINLLAEMCSNGI 397
+ + + L EM I
Sbjct: 663 SKNCDFEKWEEVVKLYKEMLDKEI 686
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 150/362 (41%), Gaps = 7/362 (1%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
A + + M+ P + FN +L S + + +++ + I T ILI
Sbjct: 221 KASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILI 280
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N F G+M A G + + + + L++G C G A D++ G
Sbjct: 281 NGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAG-- 338
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAY 211
+ + TY I LC+ G A +LL + DV YNT++ + +A
Sbjct: 339 --IYPTTSTYNIYICALCDFGRIDDARELLSSMAA--PDVVSYNTLMHGYIKMGKFVEAS 394
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
L++++ I P + TYNTLI G C G L A M + I PDV T L+
Sbjct: 395 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454
Query: 272 CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA-RFLSHTMATRGVTPD 330
K + A V M++ ++P+ + Y T G + KA R +AT PD
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD 514
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
+ YN+ I LC + +A+ + + PD TY+ +I G+L + A NL
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574
Query: 391 EM 392
EM
Sbjct: 575 EM 576
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 157/366 (42%), Gaps = 13/366 (3%)
Query: 36 SFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATL-TILINCF 94
SF M+ P + N +L L A ++ + + GI P + T T+L +CF
Sbjct: 190 SFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCF 249
Query: 95 CHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQV 154
G + + ++ +R + L+ G NG++ A FH D++ GF
Sbjct: 250 -KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAV-- 306
Query: 155 DRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYD 212
++ LI C+ G A + ++ + YN I ++C+ + DA +
Sbjct: 307 --TPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARE 364
Query: 213 LYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALC 272
L + M +PDV +YNTL++G+ G+ +A F+ ++ +I P + T + LI LC
Sbjct: 365 LLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLC 420
Query: 273 KERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVH 332
+ ++ A + M + P+V Y TL+ G+ ++ A + M +G+ PD +
Sbjct: 421 ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 480
Query: 333 TYNIMISWLCTSNMMDEAMSLFHYMDLKD-IKPDAETYSILIEGWLNLPHYMHAINLLAE 391
Y D+A L M D PD Y++ I+G + + + AI +
Sbjct: 481 AYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRK 540
Query: 392 MCSNGI 397
+ G+
Sbjct: 541 IFRVGL 546
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 9/224 (4%)
Query: 195 NTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKM 254
N ++K + + + ++ A +Y M+ I P V T+NT++ G L + + MK
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 266
Query: 255 ENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTK 314
NI+ T + LI+ K K+++A M ++ + +N LI+GYC
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDD 326
Query: 315 ARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIE 374
A ++ M G+ P TYNI I LC +D+A L M PD +Y+ L+
Sbjct: 327 AWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMH 382
Query: 375 GWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFD 413
G++ + ++ A L ++ + I Y + +D +C N +
Sbjct: 383 GYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 6/201 (2%)
Query: 81 APDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAIN 140
APD+ + I+ C +G + A KI + PD TT+++G NG+ + A N
Sbjct: 512 APDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARN 571
Query: 141 FHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTII 198
+D++ K V +TY LI + G A Q ++++ +V +N ++
Sbjct: 572 LYDEMLRKRLYPSV----ITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALL 627
Query: 199 KSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
MC+ + +AY +M + I P+ ++Y LI C + + V + M + I+
Sbjct: 628 YGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687
Query: 259 PDVSTCDPLIHALCKERKVKQ 279
PD T L L K+ + ++
Sbjct: 688 PDGYTHRALFKHLEKDHESRE 708
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 5/174 (2%)
Query: 249 FNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCL 308
F M + P V C+ ++ L R + +A++V MI+ + P V +NT++D
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 309 INQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAET 368
+ + + M R + TYNI+I+ + M+EA M +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 369 YSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIE 417
++ LIEG+ + A + EM + GI Y + A+C+ DD E
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARE 364
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 155/319 (48%), Gaps = 6/319 (1%)
Query: 38 HNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHL 97
M++ P + + ++ + ++ + + A+ + ++++ +GIAPDI LI
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA 500
Query: 98 GRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRV 157
RM+ A S L ++++ +P+ + G E SA + +++ G V
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG----VLPN 556
Query: 158 SVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYN 215
V LINE C+ G+ A R + ++ D + Y ++ + ++ V DA +++
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616
Query: 216 EMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKER 275
EM K I+PDVF+Y LI GF G ++KA F+ M E + P+V + L+ C+
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Query: 276 KVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYN 335
++++A ++ M + PN Y T+IDGYC + +A L M +G+ PD Y
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Query: 336 IMISWLCTSNMMDEAMSLF 354
++ C N ++ A+++F
Sbjct: 737 TLVDGCCRLNDVERAITIF 755
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 158/343 (46%), Gaps = 6/343 (1%)
Query: 68 AVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMK 127
A ++ +++ G P++ T LI F R A VL ++ ++ PD +L+
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 128 GLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE 187
GL + A +F ++ G + + TY I+ E E +A + ++++ E
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPN----AFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 188 HT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKA 245
+ + +I C+ V +A Y M+ + I D TY L+ G ++ A
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 246 VGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDG 305
F M+ + I PDV + LI+ K +++A+S+ M++ + PNV IYN L+ G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 306 YCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPD 365
+C ++ KA+ L M+ +G+ P+ TY +I C S + EA LF M LK + PD
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Query: 366 AETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKLDAICN 408
+ Y+ L++G L AI + + T+ +A+ N
Sbjct: 732 SFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 159/361 (44%), Gaps = 19/361 (5%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + + + + + +A +++ G+ P+ T LIN +C G++ A S
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
++ + D T LM GL N ++ A +++ KG V +Y LIN
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV----FSYGVLIN 635
Query: 167 ELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
++G A + ++ EE +V +YN ++ C + A +L +EM +K + P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
+ TY T+I G+C G L +A F+ MK++ + PD L+ C+ V++A ++
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 285 AAMIK---ASVEPNVFIYNTLID-----GYCLINQMTKARFLSHTMATRGVTPDVHTYNI 336
K +S P +N LI+ G + R + + G DV TYNI
Sbjct: 756 GTNKKGCASSTAP----FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV-TYNI 810
Query: 337 MISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
MI +LC ++ A LFH M ++ P TY+ L+ G+ + + E + G
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 397 I 397
I
Sbjct: 871 I 871
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 156/368 (42%), Gaps = 42/368 (11%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
+ + A S++ +M+ + ++ L + + A + +++ KGIAPD+ +
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
+LIN F LG M A S+ ++++ P+ L+ G C +GEI A D++ K
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVS 208
G +VTY +I+ C+ G+ ++
Sbjct: 692 GLHPN----AVTYCTIIDGYCKSGD---------------------------------LA 714
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
+A+ L++EM LK + PD F Y TL+ G C + +A+ F K + + + LI
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALI 773
Query: 269 HALCKERKVKQANSVVAAMIKASVE----PNVFIYNTLIDGYCLINQMTKARFLSHTMAT 324
+ + K K + V+ ++ S + PN YN +ID C + A+ L H M
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 325 RGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMH 384
+ P V TY +++ E +F I+PD YS++I +L
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTK 893
Query: 385 AINLLAEM 392
A+ L+ +M
Sbjct: 894 ALVLVDQM 901
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 164/428 (38%), Gaps = 85/428 (19%)
Query: 68 AVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMK 127
A+ L + + KG+ P T +LI+ C + R+ A S+L ++ D + L+
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 128 GL------------------------------CL-----NGEIRSAINFHDDVKAKGFQF 152
GL C+ G + A D + A G
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQ--MYNTIIKSMCEDKCVSDA 210
Q Y LI C +LL ++++ + + Y T++K MC + A
Sbjct: 381 QAQ----AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
Y++ EM+ P+V Y TLI F + A+ MK + I PD+ + LI
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDG------------------------- 305
L K +++ +A S + M++ ++PN F Y I G
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 306 ----------YCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFH 355
YC ++ +A +M +G+ D TY ++++ L ++ +D+A +F
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616
Query: 356 YMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDY 410
M K I PD +Y +LI G+ L + A ++ EM G I Y L C
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR-- 674
Query: 411 NFDDEIEK 418
EIEK
Sbjct: 675 --SGEIEK 680
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 147/352 (41%), Gaps = 27/352 (7%)
Query: 16 MRYHSHSPRPFSHEAV-----------NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNH 64
MR +P FS+ + A S F M+ P + +N +LG R
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 65 YPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTT 124
A L ++ +KG+ P+ T +I+ +C G + AF + ++ + PD+ TT
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 125 LMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQI 184
L+ G C ++ AI K KG + + LIN + + G+T ++L ++
Sbjct: 738 LVDGCCRLNDVERAITIFGTNK-KGCASS----TAPFNALINWVFKFGKTELKTEVLNRL 792
Query: 185 EEEHTDV------QMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA 238
+ D YN +I +C++ + A +L+++M + P V TY +L+ G+
Sbjct: 793 MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852
Query: 239 GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM-----IKASVE 293
G+ + F+ I+PD +I+A KE +A +V M + +
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCK 912
Query: 294 PNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSN 345
++ L+ G+ + +M A + M PD T +I+ C S+
Sbjct: 913 LSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISS 964
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 26/229 (11%)
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGG--QLRKAVGF----------FNV------- 251
+D+Y M+ + + DV TY+ LI C G QL K V F NV
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 252 --MKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
M + + P T D LI LCK ++++ A S++ M V + Y+ LIDG
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
A+ L H M + G+ + Y+ I + +M++A +LF M + P A+ Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLDAICNDYNFD 413
+ LIEG+ + LL EM I Y + + +C+ + D
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 147/404 (36%), Gaps = 37/404 (9%)
Query: 52 FNNILGSLVRM--NHYPTA------VSLSQQLELKGIAPDIATLTILINCFCHLGRMNYA 103
F L + RM ++P A V SQ E G + D IL + + G + A
Sbjct: 113 FEKALSVVERMIERNWPVAEVWSSIVRCSQ--EFVGKSDDGVLFGILFDGYIAKGYIEEA 170
Query: 104 FSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRF 163
V + P + L+ L + + + + + F V TY
Sbjct: 171 VFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVK----TYHM 226
Query: 164 LINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
LI C G +L + E+E + V A L M+ K +
Sbjct: 227 LIIAHCRAGNVQLGKDVLFKTEKEFRTATLN------------VDGALKLKESMICKGLV 274
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
P +TY+ LI G C +L A M + D T LI L K R A +
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQ---MTKARFLSHTMATRGVTPDVHTYNIMISW 340
V M+ + ++Y+ I C++++ M KA+ L M G+ P Y +I
Sbjct: 335 VHEMVSHGINIKPYMYDCCI---CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG---- 396
C + + L M ++I TY +++G + A N++ EM ++G
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 397 -IAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIVL 439
+ YT+ + + F D + KE G D + +++
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 167/380 (43%), Gaps = 11/380 (2%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
M ++ P + F + L R A + ++++ +G PD+ T T+LI+ C
Sbjct: 246 LKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 305
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
+++ A V K+ ++PD TL+ N ++ S F +++ G V
Sbjct: 306 ARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDV-- 363
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLY 214
VT+ L++ LC+ G G A L + ++ ++ YNT+I + + DA +L+
Sbjct: 364 --VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
M + P +TY I + G A+ F MK + I P++ C+ +++L K
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY 334
+ ++A + + + P+ YN ++ Y + ++ +A L M G PDV
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 335 NIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCS 394
N +I+ L ++ +DEA +F M +KP TY+ L+ G AI L M
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 395 NG-----IAYTSKLDAICND 409
G I + + D +C +
Sbjct: 602 KGCPPNTITFNTLFDCLCKN 621
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 161/407 (39%), Gaps = 39/407 (9%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
E A+ M+ M P + +N I+ LV+ A+ Q++ K + PD TL
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLC 681
Query: 89 ILINCFCHLGRMNYAFSVLGKILKR-AYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKA 147
L+ + A+ ++ L A QP L+ + I +A++F + + A
Sbjct: 682 TLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVA 741
Query: 148 KGFQFQVDRVSV---------------------------------TYRFLINELCEVGET 174
G D + V TY LI L E
Sbjct: 742 NGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMI 801
Query: 175 GAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL 232
A + Q++ DV YN ++ + + + + ++LY EM + T+N +
Sbjct: 802 EIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIV 861
Query: 233 IYGFCAGGQLRKAVG-FFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKAS 291
I G G + A+ ++++M + P T PLI L K ++ +A + M+
Sbjct: 862 ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 292 VEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAM 351
PN IYN LI+G+ + A L M GV PD+ TY++++ LC +DE +
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981
Query: 352 SLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM-CSNGI 397
F + + PD Y+++I G A+ L EM S GI
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI 1028
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 152/380 (40%), Gaps = 42/380 (11%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A F M + R P + +L + ++E G PD+ T TIL++
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C G AF L + + P+ TL+ GL + A+ ++++ G
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG--- 428
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT----------------------- 189
V + TY I+ + G++ +AL+ +++ +
Sbjct: 429 -VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 190 --------------DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYG 235
D YN ++K + + +A L +EM+ PDV N+LI
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 236 FCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPN 295
++ +A F MK +KP V T + L+ L K K+++A + M++ PN
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Query: 296 VFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFH 355
+NTL D C +++T A + M G PDV TYN +I L + + EAM FH
Sbjct: 608 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH 667
Query: 356 YMDLKDIKPDAETYSILIEG 375
M K + PD T L+ G
Sbjct: 668 QMK-KLVYPDFVTLCTLLPG 686
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 195/450 (43%), Gaps = 53/450 (11%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S ++V+A+ +F M + AP I N L SL + A + L+ G+ PD T
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
+++ C+ +G ++ A +L ++++ +PD + +L+ L + A +K
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCED 204
+ ++ VTY L+ L + G+ A++L + ++ + +NT+ +C++
Sbjct: 566 ----EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN 621
Query: 205 KCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTC 264
V+ A + +M+ PDVFTYNT+I+G GQ+++A+ FF+ MK + + PD T
Sbjct: 622 DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTL 680
Query: 265 DPLIHALCKERKVKQANSVV---------------------AAMIKASVEPNVFIYNTLI 303
L+ + K ++ A ++ + + +A ++ V L+
Sbjct: 681 CTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLV 740
Query: 304 ------DG----------YCLINQMTKARFLSHTMATR-GVTPDVHTYNIMISWLCTSNM 346
DG C N ++ AR L GV P + TYN++I L ++M
Sbjct: 741 ANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADM 800
Query: 347 MDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCS-----NGIAYTS 401
++ A +F + PD TY+ L++ + L EM + N I +
Sbjct: 801 IEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNI 860
Query: 402 KLDAICNDYNFDDEIEKFMRYKETGGDADF 431
+ + N DD ++ Y + D DF
Sbjct: 861 VISGLVKAGNVDDALD---LYYDLMSDRDF 887
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 158/353 (44%), Gaps = 37/353 (10%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + +N ++G L+ + A + Q++ G PD+AT L++ + G+++ F +
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
++ + +T ++ GL G + A++ + D+ + + TY LI+
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS---DRDFSPTACTYGPLID 899
Query: 167 ELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
L + G ++Y +A L+ ML P+
Sbjct: 900 GLSKSG-------------------RLY--------------EAKQLFEGMLDYGCRPNC 926
Query: 227 FTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAA 286
YN LI GF G+ A F M E ++PD+ T L+ LC +V +
Sbjct: 927 AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE 986
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMAT-RGVTPDVHTYNIMISWLCTSN 345
+ ++ + P+V YN +I+G +++ +A L + M T RG+TPD++TYN +I L +
Sbjct: 987 LKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAG 1046
Query: 346 MMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA 398
M++EA +++ + ++P+ T++ LI G+ HA + M + G +
Sbjct: 1047 MVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFS 1099
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 151/357 (42%), Gaps = 22/357 (6%)
Query: 96 HLGRMNYAFSVLGK-ILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQV 154
L M Y F ++ K I+KR DT T+ K L + G ++ A ++ GF
Sbjct: 133 KLEEMAYVFDLMQKRIIKR----DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLN- 187
Query: 155 DRVSVTYRFLINELCEVGETGAALQLLRQ--IEEEHTDVQMYNTIIKSMCEDKCVSDAYD 212
+ +Y LI+ L + A+++ R+ +E +Q Y++++ + + + +
Sbjct: 188 ---AYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG 244
Query: 213 LYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALC 272
L EM + P+V+T+ I G++ +A M E PDV T LI ALC
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304
Query: 273 KERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVH 332
RK+ A V M +P+ Y TL+D + + + M G PDV
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 333 TYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
T+ I++ LC + EA M + I P+ TY+ LI G L + A+ L M
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 393 CSNGIAYTSKLDAICNDY-----NFDDEIEKFMRYKETGGDADFLIASHIVLRNPSF 444
S G+ T+ + DY + +E F + K G IA +IV N S
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG------IAPNIVACNASL 475
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 8/254 (3%)
Query: 53 NNILGSLVRMNHYPTAVSLSQQL-ELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
N ++ LV+ + A+ L L + +P T LI+ GR+ A + +L
Sbjct: 859 NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML 918
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+P+ L+ G GE +A + +G + + TY L++ LC V
Sbjct: 919 DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK----TYSVLVDCLCMV 974
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKR-ISPDVFT 228
G L ++++E + DV YN II + + + +A L+NEM R I+PD++T
Sbjct: 975 GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYT 1034
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
YN+LI G + +A +N ++ ++P+V T + LI K + A +V M+
Sbjct: 1035 YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1094
Query: 289 KASVEPNVFIYNTL 302
PN Y L
Sbjct: 1095 TGGFSPNTGTYEQL 1108
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 1/187 (0%)
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF-NVMKMENIKPDVSTCDPLIHA 270
D M+ K PD+ + + G + + +F +V N+ TC+ ++ A
Sbjct: 68 DFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEA 127
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
L + K+++ V M K ++ + Y T+ + + +A + M G +
Sbjct: 128 LRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLN 187
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
++YN +I L S EAM ++ M L+ +P +TYS L+ G + LL
Sbjct: 188 AYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLK 247
Query: 391 EMCSNGI 397
EM + G+
Sbjct: 248 EMETLGL 254
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 151/353 (42%), Gaps = 6/353 (1%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P +N I+G+L + H TA+ L + + L G PD+ T +I C G A
Sbjct: 171 VPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIR 230
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
L+ P T L++ +C AI +D+ +G + VTY L+
Sbjct: 231 FWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDI----VTYNSLV 286
Query: 166 NELCEVGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
N C G +++ I ++ YNT++ S+C + + ++ N M
Sbjct: 287 NYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYC 346
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
P V TYN LI G C L +A+ FF M + PD+ T + ++ A+ KE V A +
Sbjct: 347 PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL 406
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
+ + P + YN++IDG M KA L H M G+ PD T +I C
Sbjct: 407 LGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCR 466
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
+N+++EA + + TY ++I+G AI ++ M + G
Sbjct: 467 ANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGG 519
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 152/357 (42%), Gaps = 11/357 (3%)
Query: 48 PITQF-----NNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNY 102
PIT+ N IL +L A L + + P + + L+ + +++
Sbjct: 98 PITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDK 157
Query: 103 AFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYR 162
A +L ++ PDT ++ LC G IR+A+ +D+ G V +TY
Sbjct: 158 AMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDV----ITYN 213
Query: 163 FLINELCEVGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCEDKCVSDAYDLYNEMLLK 220
+I + + G A++ + + M Y +++ +C + A ++ +M ++
Sbjct: 214 TVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVE 273
Query: 221 RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQA 280
PD+ TYN+L+ C G L + + ++ + T + L+H+LC +
Sbjct: 274 GCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEV 333
Query: 281 NSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISW 340
++ M + S P V YN LI+G C +++A + M + PD+ TYN ++
Sbjct: 334 EEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGA 393
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
+ M+D+A+ L + P TY+ +I+G A+ L +M GI
Sbjct: 394 MSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGI 450
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 132/311 (42%), Gaps = 13/311 (4%)
Query: 47 PPITQFNNILGSLV-RMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
PP +L LV R A+ + + + ++G PDI T L+N C G + S
Sbjct: 241 PPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVAS 300
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLN---GEIRSAINFHDDVKAKGFQFQVDRVSVTYR 162
V+ IL + +T TL+ LC + E+ +N +Q +TY
Sbjct: 301 VIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIM-------YQTSYCPTVITYN 353
Query: 163 FLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLK 220
LIN LC+ A+ Q+ E+ D+ YNT++ +M ++ V DA +L +
Sbjct: 354 ILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNT 413
Query: 221 RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQA 280
P + TYN++I G G ++KA+ ++ M I PD T LI+ C+ V++A
Sbjct: 414 CCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEA 473
Query: 281 NSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISW 340
V+ Y +I G C ++ A + M T G PD Y ++
Sbjct: 474 GQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKG 533
Query: 341 LCTSNMMDEAM 351
+ M EA+
Sbjct: 534 VEEMGMGSEAV 544
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 5/195 (2%)
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
D T N +++ C+ G+L A VM N P +C L+ L + ++ +A ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
M+ + P+ YN +I C + A L M+ G PDV TYN +I +
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAY 399
++A+ + P TY++L+E AI +L +M G + Y
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 400 TSKLDAICNDYNFDD 414
S ++ C N ++
Sbjct: 283 NSLVNYNCRRGNLEE 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 107/239 (44%), Gaps = 12/239 (5%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
D + N I+ ++C + ++DA L M P + + L+ G QL KA+
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
VM M PD T + +I LCK+ ++ A ++ M + P+V YNT+I C+
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVI--RCMF 220
Query: 310 ---NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDA 366
N RF + G P + TY +++ +C A+ + M ++ PD
Sbjct: 221 DYGNAEQAIRFWKDQLQN-GCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDI 279
Query: 367 ETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKFM 420
TY+ L+ + +++ + S+G + Y + L ++C+ + + DE+E+ +
Sbjct: 280 VTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCS-HEYWDEVEEIL 337
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 89/224 (39%), Gaps = 9/224 (4%)
Query: 27 SHEAVNAVSSFHN-MLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIA 85
SHE + V N M P + +N ++ L + A+ Q+ + PDI
Sbjct: 326 SHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIV 385
Query: 86 TLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAIN-FHDD 144
T ++ G ++ A +LG + P +++ GL G ++ A+ +H
Sbjct: 386 TYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQM 445
Query: 145 VKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQ--MYNTIIKSMC 202
+ A F + R S+ Y F C A Q+L++ ++ Y +I+ +C
Sbjct: 446 LDAGIFPDDITRRSLIYGF-----CRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLC 500
Query: 203 EDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAV 246
+ K + A ++ ML PD Y ++ G G +AV
Sbjct: 501 KKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 170/342 (49%), Gaps = 9/342 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
AV F+ M++ + +N ++ L + A+ + ++ G P+ T ++L+N
Sbjct: 289 AVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLN 348
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
G++ V+ +I KR + L++ L G + A D+ + F
Sbjct: 349 LLVAEGQLVRLDGVV-EISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDM----WSF 401
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDA 210
V +Y ++ LC G+T A+++L +I E+ TD MYNT+ ++ + K +S
Sbjct: 402 PVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHI 461
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
+DL+ +M SPD+FTYN LI F G++ +A+ F ++ + KPD+ + + LI+
Sbjct: 462 HDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINC 521
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
L K V +A+ M + + P+V Y+TL++ + ++ A L M +G P+
Sbjct: 522 LGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPN 581
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSIL 372
+ TYNI++ L + EA+ L+ M + + PD+ TY++L
Sbjct: 582 IVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 168/387 (43%), Gaps = 13/387 (3%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
I +N +L +L + A + + ++ + D T TI+I +G+ + A +
Sbjct: 238 IFAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFN 294
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
+++ + TLM+ L + AI + G + TY L+N L
Sbjct: 295 EMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPN----EYTYSLLLNLL 350
Query: 169 CEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFT 228
G+ L + +I + + +Y+ +++++ + VS+A+ L+ +M + + +
Sbjct: 351 VAEGQL-VRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDS 409
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
Y +++ C G+ +A+ + + + + D + + AL K +++ + + M
Sbjct: 410 YMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMK 469
Query: 289 KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMD 348
K P++F YN LI + + ++ +A + + PD+ +YN +I+ L + +D
Sbjct: 470 KDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVD 529
Query: 349 EAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKL 403
EA F M K + PD TYS L+E + A +L EM G + Y L
Sbjct: 530 EAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILL 589
Query: 404 DAICNDYNFDDEIEKFMRYKETGGDAD 430
D + + + ++ + + K+ G D
Sbjct: 590 DCLEKNGRTAEAVDLYSKMKQQGLTPD 616
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 105/260 (40%), Gaps = 17/260 (6%)
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
Y ++++ + S A+D+Y E+ D+F YN L+ KA F MK
Sbjct: 206 YKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMK 262
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
+ + D T +I + + K +A + MI + NV YNTL+ +
Sbjct: 263 KRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVD 322
Query: 314 KARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
KA + M G P+ +TY+++++ L + + L +++ YS L+
Sbjct: 323 KAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQL---VRLDGVVEISKRYMTQGIYSYLV 379
Query: 374 EGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKFMRYKETGGD 428
L H A L +M S + +Y S L+++C + IE + E G
Sbjct: 380 RTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKG-- 437
Query: 429 ADFLIASHIVLRNPSFKATG 448
+ + ++ N F A G
Sbjct: 438 ----VVTDTMMYNTVFSALG 453
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
E A++ F + P I +N+++ L + A ++++ KG+ PD+ T +
Sbjct: 492 EVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYS 551
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
L+ CF R+ A+S+ ++L + QP+ L+ L NG A++ + +K +
Sbjct: 552 TLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQ 611
Query: 149 GFQFQVDRVSVTYRFL 164
G S+TY L
Sbjct: 612 GLTPD----SITYTVL 623
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 142/301 (47%), Gaps = 9/301 (2%)
Query: 82 PDIATLTILINCFCHL--GRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAI 139
P +T IL++ C ++ VL ++ +PD ++ LC G + A
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 140 NFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE---HTDVQMYNT 196
+ ++ K + TY FL+ LC+ + + + ++ ++ D+ +
Sbjct: 180 DLMKELTEK----HSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN 256
+I ++C K + +A L +++ PD F YNT++ GFC + +AVG + MK E
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKAR 316
++PD T + LI L K +V++A + M+ A EP+ Y +L++G C + A
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGAL 355
Query: 317 FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
L M RG P+ TYN ++ LC + +MD+ M L+ M +K ++ Y+ L+
Sbjct: 356 SLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSL 415
Query: 377 L 377
+
Sbjct: 416 V 416
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 142/297 (47%), Gaps = 7/297 (2%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G+ PD T I + C GR++ A ++ ++ ++ PDT L+K LC ++
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNT 196
F D+++ F + D VS T LI+ +C A+ L+ ++ D +YNT
Sbjct: 214 YEFVDEMR-DDFDVKPDLVSFT--ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNT 270
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN 256
I+K C S+A +Y +M + + PD TYNTLI+G G++ +A + M
Sbjct: 271 IMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG 330
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKAR 316
+PD +T L++ +C++ + A S++ M PN YNTL+ G C M K
Sbjct: 331 YEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGM 390
Query: 317 FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHY-MDLKDIKPDAETYSIL 372
L M + GV + + Y ++ L S + EA +F Y +D K + DA YS L
Sbjct: 391 ELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLS-DASAYSTL 446
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 119/235 (50%), Gaps = 6/235 (2%)
Query: 198 IKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME-N 256
++S+CE V +A DL E+ K PD +TYN L+ C L F + M+ + +
Sbjct: 166 VRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFD 225
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKAR 316
+KPD+ + LI +C + +++A +V+ + A +P+ F+YNT++ G+C +++ ++A
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 317 FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
+ M GV PD TYN +I L + ++EA M +PD TY+ L+ G
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 377 LNLPHYMHAINLLAEMCSNGIA-----YTSKLDAICNDYNFDDEIEKFMRYKETG 426
+ A++LL EM + G A Y + L +C D +E + K +G
Sbjct: 346 CRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSG 400
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 3/246 (1%)
Query: 159 VTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNE 216
VT + LCE G A L++++ E+H+ D YN ++K +C+ K + Y+ +E
Sbjct: 160 VTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDE 219
Query: 217 MLLK-RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKER 275
M + PD+ ++ LI C LR+A+ + + KPD + ++ C
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 276 KVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYN 335
K +A V M + VEP+ YNTLI G ++ +AR TM G PD TY
Sbjct: 280 KGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYT 339
Query: 336 IMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSN 395
+++ +C A+SL M+ + P+ TY+ L+ G + L M S+
Sbjct: 340 SLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSS 399
Query: 396 GIAYTS 401
G+ S
Sbjct: 400 GVKLES 405
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 6/206 (2%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + F ++ ++ + A+ L +L G PD ++ FC L + + A V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
K+ + +PD TL+ GL G + A + + G++ + TY L+N
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPD----TATYTSLMN 343
Query: 167 ELCEVGETGAALQLLRQIEEEHTDVQ--MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
+C GE+ AL LL ++E YNT++ +C+ + + +LY M +
Sbjct: 344 GMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKL 403
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFN 250
+ Y TL+ G++ +A F+
Sbjct: 404 ESNGYATLVRSLVKSGKVAEAYEVFD 429
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 152/343 (44%), Gaps = 6/343 (1%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
F+++ + + + A Q++ G P + + ++ GR++ A ++
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+ P+ L +M G C +G++ I D++ GF+ V+Y LI CE
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFR----ATDVSYNTLIAGHCEK 286
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
G +AL+L + + +V +NT+I C + +A ++ EM ++P+ TY
Sbjct: 287 GLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTY 346
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
NTLI G+ G A F+ M I+ D+ T + LI LCK+ K ++A V + K
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
++ PN ++ LI G C+ + L +M G P+ T+N+++S C + D
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 350 AMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
A + M + I D+ T + G + LL EM
Sbjct: 467 ASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 142/323 (43%), Gaps = 9/323 (2%)
Query: 90 LINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKG 149
L F HL + A ++ + P + M L G + A+ F+ +++
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR--- 230
Query: 150 FQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE---EHTDVQMYNTIIKSMCEDKC 206
+ ++ T +++ C G+ ++LL+ +E TDV YNT+I CE
Sbjct: 231 -RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVS-YNTLIAGHCEKGL 288
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+S A L N M + P+V T+NTLI+GFC +L++A F MK N+ P+ T +
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
LI+ ++ + A M+ ++ ++ YN LI G C + KA +
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
+ P+ T++ +I C D L+ M P+ +T+++L+ + + A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGAS 468
Query: 387 NLLAEMCSNGIAYTSK-LDAICN 408
+L EM I S+ + +CN
Sbjct: 469 QVLREMVRRSIPLDSRTVHQVCN 491
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%)
Query: 180 LLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAG 239
LL E + ++++++ K+ K +A D + +M P V + N +
Sbjct: 157 LLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQ 216
Query: 240 GQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIY 299
G++ A+ F+ M+ I P+ T + ++ C+ K+ + ++ M + Y
Sbjct: 217 GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY 276
Query: 300 NTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDL 359
NTLI G+C ++ A L + M G+ P+V T+N +I C + + EA +F M
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 360 KDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
++ P+ TY+ LI G+ + A +M NGI
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGI 374
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 3/203 (1%)
Query: 223 SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS 282
+P VF ++L F + R A F MK P V +C+ + +L + +V A
Sbjct: 167 TPRVF--DSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 283 VVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC 342
M + + PN + N ++ GYC ++ K L M G +YN +I+ C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 343 TSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-YTS 401
++ A+ L + M ++P+ T++ LI G+ A + EM + +A T
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 402 KLDAICNDYNFDDEIEKFMRYKE 424
+ + N Y+ + E R+ E
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYE 367
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 152/343 (44%), Gaps = 6/343 (1%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
F+++ + + + A Q++ G P + + ++ GR++ A ++
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+ P+ L +M G C +G++ I D++ GF+ V+Y LI CE
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFR----ATDVSYNTLIAGHCEK 286
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
G +AL+L + + +V +NT+I C + +A ++ EM ++P+ TY
Sbjct: 287 GLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTY 346
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
NTLI G+ G A F+ M I+ D+ T + LI LCK+ K ++A V + K
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
++ PN ++ LI G C+ + L +M G P+ T+N+++S C + D
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 350 AMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
A + M + I D+ T + G + LL EM
Sbjct: 467 ASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 142/323 (43%), Gaps = 9/323 (2%)
Query: 90 LINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKG 149
L F HL + A ++ + P + M L G + A+ F+ +++
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR--- 230
Query: 150 FQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE---EHTDVQMYNTIIKSMCEDKC 206
+ ++ T +++ C G+ ++LL+ +E TDV YNT+I CE
Sbjct: 231 -RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVS-YNTLIAGHCEKGL 288
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+S A L N M + P+V T+NTLI+GFC +L++A F MK N+ P+ T +
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
LI+ ++ + A M+ ++ ++ YN LI G C + KA +
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
+ P+ T++ +I C D L+ M P+ +T+++L+ + + A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGAS 468
Query: 387 NLLAEMCSNGIAYTSK-LDAICN 408
+L EM I S+ + +CN
Sbjct: 469 QVLREMVRRSIPLDSRTVHQVCN 491
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%)
Query: 180 LLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAG 239
LL E + ++++++ K+ K +A D + +M P V + N +
Sbjct: 157 LLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQ 216
Query: 240 GQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIY 299
G++ A+ F+ M+ I P+ T + ++ C+ K+ + ++ M + Y
Sbjct: 217 GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY 276
Query: 300 NTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDL 359
NTLI G+C ++ A L + M G+ P+V T+N +I C + + EA +F M
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 360 KDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
++ P+ TY+ LI G+ + A +M NGI
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGI 374
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 3/203 (1%)
Query: 223 SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS 282
+P VF ++L F + R A F MK P V +C+ + +L + +V A
Sbjct: 167 TPRVF--DSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 283 VVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC 342
M + + PN + N ++ GYC ++ K L M G +YN +I+ C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 343 TSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-YTS 401
++ A+ L + M ++P+ T++ LI G+ A + EM + +A T
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 402 KLDAICNDYNFDDEIEKFMRYKE 424
+ + N Y+ + E R+ E
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYE 367
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 160/387 (41%), Gaps = 26/387 (6%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
A S M+ P + ++ +L L + A L ++++ G+ D+ T TI++
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 525
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ FC G + A ++ + P+ T L+ ++ A + + ++G
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAY 211
+ VTY LI+ C+ G+ A Q I + MC K V D
Sbjct: 586 PNI----VTYSALIDGHCKAGQVEKACQ-----------------IFERMCGSKDVPDVD 624
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
+ + P+V TY L+ GFC ++ +A + M ME +P+ D LI L
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684
Query: 272 CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV 331
CK K+ +A V M + ++ Y++LID Y + + A + M P+V
Sbjct: 685 CKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 744
Query: 332 HTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE 391
Y MI LC DEA L M+ K +P+ TY+ +I+G+ + + LL
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804
Query: 392 MCSNGIA-----YTSKLDAICNDYNFD 413
M S G+A Y +D C + D
Sbjct: 805 MGSKGVAPNYVTYRVLIDHCCKNGALD 831
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 173/416 (41%), Gaps = 36/416 (8%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
A+ + M + P + ++ +L + + + ++G P L+
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLC-----LNGEIRS-AINFHDDV 145
+ +C G +YA+ +L K++K + P L+ +C LN ++ A + ++
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEM 439
Query: 146 KAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCE 203
A G VS R LC G+ A ++R++ + D Y+ ++ +C
Sbjct: 440 LAAGVVLNKINVSSFTRC----LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 495
Query: 204 DKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVST 263
+ A+ L+ EM + DV+TY ++ FC G + +A +FN M+ P+V T
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555
Query: 264 CDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMA 323
LIHA K +KV AN + M+ PN+ Y+ LIDG+C Q+ KA + M
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615
Query: 324 TRGVTPDVH----------------TYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAE 367
PDV TY ++ C S+ ++EA L M ++ +P+
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI 675
Query: 368 TYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKLDAICNDYNFDDEIEKFMRYK 423
Y LI+G + A + EM +G T Y + I+++ + K
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL--------YTYSSLIDRYFKVK 723
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 155/356 (43%), Gaps = 31/356 (8%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G+ + ++ C C G+ AFSV+ +++ + + PDT+ + ++ LC ++ A
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNT 196
+++K G V TY +++ C+ G A + ++ E +V Y
Sbjct: 503 FLLFEEMKRGGLVADV----YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN 256
+I + + K VS A +L+ ML + P++ TY+ LI G C GQ+ KA F M
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKAR 316
PDV + KQ + S PNV Y L+DG+C +++ +AR
Sbjct: 619 DVPDV------------DMYFKQYDD-------NSERPNVVTYGALLDGFCKSHRVEEAR 659
Query: 317 FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
L M+ G P+ Y+ +I LC +DEA + M TYS LI+ +
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Query: 377 LNLPHYMHAINLLAEMCSNGIA-----YTSKLDAICNDYNFDDEIEKFMRYKETGG 427
+ A +L++M N A YT +D +C DE K M+ E G
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK-VGKTDEAYKLMQMMEEKG 774
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 142/365 (38%), Gaps = 51/365 (13%)
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
L +L+ C G + A LG++ ++P + L++ + SA H ++
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKC 206
+ T R LC+VG+ AL L+ + E D Y +I +CE
Sbjct: 263 LANLRMD----GFTLRCFAYSLCKVGKWREALTLV-ETENFVPDTVFYTKLISGLCEASL 317
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+A D N M P+V TY+TL+ G QL + N+M ME P +
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNS 377
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC------------------- 307
L+HA C A ++ M+K P +YN LI C
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437
Query: 308 -------LINQMTKARF---------------LSHTMATRGVTPDVHTYNIMISWLCTSN 345
++N++ + F + M +G PD TY+ ++++LC ++
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497
Query: 346 MMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM----CS-NGIAYT 400
M+ A LF M + D TY+I+++ + A EM C+ N + YT
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557
Query: 401 SKLDA 405
+ + A
Sbjct: 558 ALIHA 562
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/503 (20%), Positives = 187/503 (37%), Gaps = 98/503 (19%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+ + R P + +N ++ + ++ + +A + +++ L + D TL
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF-- 150
C +G+ A ++ + + PDT T L+ GLC A++F + ++A
Sbjct: 279 SLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 151 --------------QFQVDRVSVT---------------YRFLINELCEVGETGAALQLL 181
+ Q+ R + L++ C G+ A +LL
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 182 RQIEE--EHTDVQMYNTIIKSMCEDK---------------------------------- 205
+++ + +YN +I S+C DK
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455
Query: 206 -CV------SDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
C+ A+ + EM+ + PD TY+ ++ C ++ A F MK +
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFL 318
DV T ++ + CK ++QA M + PNV Y LI Y +++ A L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Query: 319 SHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYM----DLKDI------------ 362
TM + G P++ TY+ +I C + +++A +F M D+ D+
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635
Query: 363 KPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIE 417
+P+ TY L++G+ A LL M G I Y + +D +C D+ E
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 418 KFMRYKETGGDADFLIASHIVLR 440
E G A S ++ R
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDR 718
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 158/366 (43%), Gaps = 23/366 (6%)
Query: 15 FMRYHSHSPRP-------------FSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVR 61
F +Y +S RP SH A M P ++ ++ L +
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 62 MNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTA 121
+ A + ++ G + T + LI+ + + R + A VL K+L+ + P+
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 122 LTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLL 181
T ++ GLC G+ A ++ KG Q V VTY +I+ +G+ L+LL
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV----VTYTAMIDGFGMIGKIETCLELL 802
Query: 182 RQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAG 239
++ + + Y +I C++ + A++L EM Y +I GF
Sbjct: 803 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--N 860
Query: 240 GQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV--AAMIKASVEPNVF 297
+ +++G + + ++ P +S LI L K ++++ A ++ A A++
Sbjct: 861 KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS 920
Query: 298 IYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYM 357
YN+LI+ CL N++ A L M +GV P++ ++ +I L ++ + EA+ L ++
Sbjct: 921 TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980
Query: 358 DLKDIK 363
+I+
Sbjct: 981 SHMEIQ 986
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 138/345 (40%), Gaps = 41/345 (11%)
Query: 82 PDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINF 141
P++ T L++ FC R+ A +L + +P+ L+ GLC G++ A
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 142 HDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIK 199
++ GF + TY LI+ +V A ++L ++ E +V +Y +I
Sbjct: 697 KTEMSEHGFPATL----YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 752
Query: 200 SMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKP 259
+C+ +AY L M K P+V TY +I GF G++ + M + + P
Sbjct: 753 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 812
Query: 260 DVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGY------------- 306
+ T LI CK + A++++ M + + Y +I+G+
Sbjct: 813 NYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDE 872
Query: 307 --------------CLINQMTKA-------RFLSHTMATRGVTPDVH-TYNIMISWLCTS 344
LI+ + KA R L D TYN +I LC +
Sbjct: 873 IGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLA 932
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLL 389
N ++ A LF M K + P+ +++ LI+G A+ LL
Sbjct: 933 NKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 22/256 (8%)
Query: 135 IRSAINFHDDV---KAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLL----RQIEEE 187
I A++ DDV K++ F Q R ++ +I L + A + RQI +
Sbjct: 104 IADAVSGVDDVFGRKSQKFLRQF-REKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYK 162
Query: 188 HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPD---VFT--YNTLIYGFCAGGQL 242
HT +YN ++ D V D + E L++I D VF N L+ C G
Sbjct: 163 HT-APVYNALV-----DLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSF 216
Query: 243 RKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTL 302
A+ +K +P ST + LI A K ++ A+ + M A++ + F
Sbjct: 217 SIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCF 276
Query: 303 IDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDI 362
C + + +A L + T PD Y +IS LC +++ +EAM + M
Sbjct: 277 AYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSC 333
Query: 363 KPDAETYSILIEGWLN 378
P+ TYS L+ G LN
Sbjct: 334 LPNVVTYSTLLCGCLN 349
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 179/402 (44%), Gaps = 13/402 (3%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P + N +L + Y A+S + ++ + PD T I+I C LG+ + A
Sbjct: 245 GPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALD 304
Query: 106 VLGKIL-KRAY-QPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRF 163
+ + KRA +PD T++M + GEI + + + A+G + + V+Y
Sbjct: 305 LFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI----VSYNA 360
Query: 164 LINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKR 221
L+ G +G AL +L I++ DV Y ++ S + A +++ M +R
Sbjct: 361 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER 420
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
P+V TYN LI + + G L +AV F M+ + IKP+V + L+ A + +K +
Sbjct: 421 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVD 480
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
+V++A + N YN+ I Y ++ KA L +M + V D T+ I+IS
Sbjct: 481 TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 540
Query: 342 CTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG----- 396
C + EA+S M+ I E YS ++ + A ++ +M G
Sbjct: 541 CRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 600
Query: 397 IAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
IAYTS L A + E F+ + G + D + S ++
Sbjct: 601 IAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 642
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 159/395 (40%), Gaps = 43/395 (10%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F M P ++ ++ + R + A++L + IAP +T LIN
Sbjct: 166 FFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGS 225
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
G A V K+ PD ++ + A+++ + + KG + + D
Sbjct: 226 SGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM--KGAKVRPD- 282
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEEHT----DVQMYNTIIKSMCEDKCVSDAYD 212
+ T+ +I L ++G++ AL L + E+ DV + +I+ + +
Sbjct: 283 -TTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRA 341
Query: 213 LYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALC 272
++ M+ + + P++ +YN L+ + G A+ +K I PDV + L+++
Sbjct: 342 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 401
Query: 273 KERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV- 331
+ R+ +A V M K +PNV YN LID Y + +A + M G+ P+V
Sbjct: 402 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 461
Query: 332 ----------------------------------HTYNIMISWLCTSNMMDEAMSLFHYM 357
YN I + +++A++L+ M
Sbjct: 462 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 521
Query: 358 DLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
K +K D+ T++ILI G + Y AI+ L EM
Sbjct: 522 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 165/392 (42%), Gaps = 19/392 (4%)
Query: 53 NNILGSLVRM----NHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
N+I ++R+ N A L +++ PD T LIN G+ +A +++
Sbjct: 143 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 202
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
+L+ A P + L+ +G R A+ + G + VT+ +++
Sbjct: 203 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDL----VTHNIVLSAY 258
Query: 169 CEVGETGAALQL--LRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS--P 224
+ AL L + + D +N II + + S A DL+N M KR P
Sbjct: 259 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP 318
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
DV T+ ++++ + G++ F M E +KP++ + + L+ A A SV+
Sbjct: 319 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 378
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
+ + + P+V Y L++ Y Q KA+ + M P+V TYN +I ++
Sbjct: 379 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 438
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AY 399
+ EA+ +F M+ IKP+ + L+ ++ +L+ S GI AY
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 498
Query: 400 TSKLDAICNDYNFDDEIEKF--MRYKETGGDA 429
S + + N + I + MR K+ D+
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADS 530
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 156/382 (40%), Gaps = 43/382 (11%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIA--PDIATLTIL 90
A+S F M + P T FN I+ L ++ A+ L + K PD+ T T +
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 326
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
++ + G + +V ++ +P+ + LM ++G +A++ D+K G
Sbjct: 327 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 386
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQ--LLRQIEEEHTDVQMYNTIIKSMCEDKCVS 208
V V+Y L+N + G A + L+ + E +V YN +I + + ++
Sbjct: 387 IPDV----VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 442
Query: 209 DAYDLYNEMLLKRISPDVFT-----------------------------------YNTLI 233
+A +++ +M I P+V + YN+ I
Sbjct: 443 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 502
Query: 234 YGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVE 293
+ +L KA+ + M+ + +K D T LI C+ K +A S + M S+
Sbjct: 503 GSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIP 562
Query: 294 PNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSL 353
+Y++++ Y Q+T+A + + M G PDV Y M+ S +A L
Sbjct: 563 LTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACEL 622
Query: 354 FHYMDLKDIKPDAETYSILIEG 375
F M+ I+PD+ S L+
Sbjct: 623 FLEMEANGIEPDSIACSALMRA 644
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 168/380 (44%), Gaps = 8/380 (2%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S + A F M R P + +N ++ + AV + +Q+E GI P++ +
Sbjct: 403 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 462
Query: 87 L-TILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDV 145
+ T+L C ++N +VL R +T A + + E+ AI + +
Sbjct: 463 VCTLLAACSRSKKKVNVD-TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 521
Query: 146 KAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDV--QMYNTIIKSMCE 203
+ K +V SVT+ LI+ C + + A+ L+++E+ + ++Y++++ + +
Sbjct: 522 RKK----KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSK 577
Query: 204 DKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVST 263
V++A ++N+M + PDV Y ++++ + A + KA F M+ I+PD
Sbjct: 578 QGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIA 637
Query: 264 CDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMA 323
C L+ A K + ++ M + + ++ + + + +A L M
Sbjct: 638 CSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMD 697
Query: 324 TRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYM 383
+ + N M+ S ++ M LF+ + + + +TY+IL+E L + ++
Sbjct: 698 PYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWR 757
Query: 384 HAINLLAEMCSNGIAYTSKL 403
I +L M GI ++++
Sbjct: 758 KYIEVLEWMSGAGIQPSNQM 777
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 5/202 (2%)
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKR---ISPDVFTYNTLIYGFCAGGQLRKAVGFFN 250
+ +I+ + C+ +++ M +++ D+ YN +I + +A G F
Sbjct: 110 FPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDI--YNMMIRLHARHNWVDQARGLFF 167
Query: 251 VMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLIN 310
M+ + KPD T D LI+A + + + A +++ M++A++ P+ YN LI+
Sbjct: 168 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 227
Query: 311 QMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
+A + M GV PD+ T+NI++S + +A+S F M ++PD T++
Sbjct: 228 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 287
Query: 371 ILIEGWLNLPHYMHAINLLAEM 392
I+I L A++L M
Sbjct: 288 IIIYCLSKLGQSSQALDLFNSM 309
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 334 YNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMC 393
YN+MI N +D+A LF M KPDAETY LI + A+NL+ +M
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 394 SNGIA-----YTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIVL 439
IA Y + ++A + N+ + +E + + G D L+ +IVL
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPD-LVTHNIVL 255
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 193/446 (43%), Gaps = 36/446 (8%)
Query: 14 LFMRYHSHSPRPFSHEAV-----------NAVSSFHNMLSMRPAPPITQFNNILGSLVRM 62
L M H P + + A+ AV F+ ML R ++IL +M
Sbjct: 315 LDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQM 374
Query: 63 NHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTAL 122
++ A L ++ I+ D + + LG++ A + ++ + PD
Sbjct: 375 GNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINY 434
Query: 123 TTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLR 182
TTL+ G CL G+ A + ++ G + V Y L L G A + L+
Sbjct: 435 TTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDI----VIYNVLAGGLATNGLAQEAFETLK 490
Query: 183 QIEEEHTDVQ--MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGG 240
+E +N +I+ + + + A Y + K D +++ GFCA G
Sbjct: 491 MMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDA----SMVKGFCAAG 546
Query: 241 QLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERK-VKQANSVVAAMIKASVEPNVFIY 299
L A F +++E P S L +LC E+ + +A ++ M K VEP +Y
Sbjct: 547 CLDHA--FERFIRLEFPLPK-SVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMY 603
Query: 300 NTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDL 359
LI +C +N + KAR + T+ + PD+ TY IMI+ C N +A +LF M
Sbjct: 604 GKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKR 663
Query: 360 KDIKPDAETYSILI--EGWLNLPHYMHAINLLAEMCSNGIAYTSKLDAIC--NDYNFDDE 415
+D+KPD TYS+L+ + L++ M A +++ ++ + YT ++ C ND
Sbjct: 664 RDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDV----VYYTIMINRYCHLNDLKKVYA 719
Query: 416 IEKFMRYKETGGDADFLIASHIVLRN 441
+ K M+ +E D ++ ++L+N
Sbjct: 720 LFKDMKRREIVPD---VVTYTVLLKN 742
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 167/456 (36%), Gaps = 89/456 (19%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
A+ F M AP + + ++G A L +++ G PDI +L
Sbjct: 414 EAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLA 473
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK----- 146
G AF L + R +P +++GL GE+ A F++ ++
Sbjct: 474 GGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRE 533
Query: 147 -----AKGF--------------QFQVDRVSVTYRFLINELC-EVGETGAALQLLRQ--- 183
KGF + + Y L LC E A LL +
Sbjct: 534 NDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWK 593
Query: 184 --IEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQ 241
+E E + MY +I + C V A + + ++ K+I PD+FTY +I +C +
Sbjct: 594 LGVEPEKS---MYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNE 650
Query: 242 LRKAVGFFNVMKMENIKPDVST------CDP----------------------LIHALC- 272
++A F MK ++KPDV T DP +I+ C
Sbjct: 651 PKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCH 710
Query: 273 --------------KERKV-------------KQANSVVAAMIKASVEPNVFIYNTLIDG 305
K R++ K ++ M V+P+VF Y LID
Sbjct: 711 LNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDW 770
Query: 306 YCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPD 365
C I + +A+ + M GV PD Y +I+ C + EA +F M +KPD
Sbjct: 771 QCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPD 830
Query: 366 AETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTS 401
Y+ LI G + A+ L+ EM GI T
Sbjct: 831 VVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTK 866
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 146/344 (42%), Gaps = 2/344 (0%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F S+ AP I N ++ ++ V ++E G+ D T +++
Sbjct: 170 FRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWR 229
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
+L ++L + ++GLCLN A ++
Sbjct: 230 NDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSD 289
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLY 214
+ + YR ++ LC A ++ +E+ DV +Y+ II+ ++ + A D++
Sbjct: 290 LGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVF 349
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
N+ML KR + ++++ +C G +A F + NI D + AL K
Sbjct: 350 NKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKL 409
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY 334
KV++A + M + P+V Y TLI G CL + + A L M G TPD+ Y
Sbjct: 410 GKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIY 469
Query: 335 NIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLN 378
N++ L T+ + EA M+ + +KP T++++IEG ++
Sbjct: 470 NVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLID 513
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 135/336 (40%), Gaps = 55/336 (16%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
M + P + + ++G+ R+N+ A + L K I PD+ T TI+IN +C
Sbjct: 588 LDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCR 647
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
L A+++ + +R +PD
Sbjct: 648 LNEPKQAYALFEDMKRRDVKPDV------------------------------------- 670
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIE--EEHTDVQMYNTIIKSMCEDKCVSDAYDLY 214
VTY L+N + L + R++E + DV Y +I C + Y L+
Sbjct: 671 --VTYSVLLN-------SDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALF 721
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
+M + I PDV TY L+ R+ MK ++KPDV LI CK
Sbjct: 722 KDMKRREIVPDVVTYTVLLKNKPERNLSRE-------MKAFDVKPDVFYYTVLIDWQCKI 774
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY 334
+ +A + MI++ V+P+ Y LI C + + +A+ + M GV PDV Y
Sbjct: 775 GDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPY 834
Query: 335 NIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
+I+ C + + +A+ L M K IKP + S
Sbjct: 835 TALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLS 870
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 20/253 (7%)
Query: 28 HEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATL 87
+E A + F +M P + ++ +L S + + +++E + PD+
Sbjct: 649 NEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYY 701
Query: 88 TILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKA 147
TI+IN +CHL + +++ + +R PD T L+K + N ++KA
Sbjct: 702 TIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-------KPERNLSREMKA 754
Query: 148 KGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTD--VQMYNTIIKSMCEDK 205
F V Y LI+ C++G+ G A ++ Q+ E D Y +I C+
Sbjct: 755 ----FDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMG 810
Query: 206 CVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCD 265
+ +A +++ M+ + PDV Y LI G C G + KAV M + IKP ++
Sbjct: 811 YLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLS 870
Query: 266 PLIHALCKERKVK 278
+ +A K + ++
Sbjct: 871 AVHYAKLKAKGLR 883
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 165/353 (46%), Gaps = 16/353 (4%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P I N ++ +L + N +A + ++ G+ P++ T T ++ + G M A
Sbjct: 188 TPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKR 247
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
VL ++L R + PD T T LM G C G A DD++ +++ VTY +I
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKN----EIEPNEVTYGVMI 303
Query: 166 NELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
LC+ ++G A + ++ E D + +I ++CED V +A L+ +ML
Sbjct: 304 RALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCM 363
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
PD +TLI+ C G++ +A F+ + +I P + T + LI +C++ ++ +A +
Sbjct: 364 PDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRL 422
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
M + +PN F YN LI+G + + + M G P+ T+ I+ L
Sbjct: 423 WDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQK 482
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAETYSILI--------EGWLNLPHYMHAINL 388
++AM + M + + K D E++ + + +G L L +H I++
Sbjct: 483 LGKEEDAMKIVS-MAVMNGKVDKESWELFLKKFAGELDKGVLPLKELLHEISV 534
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 137/280 (48%), Gaps = 11/280 (3%)
Query: 32 NAVSSFHNML----SMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATL 87
N + S + +L SM P + + ILG V +A + +++ +G PD T
Sbjct: 205 NDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTY 264
Query: 88 TILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKA 147
T+L++ +C LGR + A +V+ + K +P+ +++ LC + A N D++
Sbjct: 265 TVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLE 324
Query: 148 KGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDK 205
+ F + S+ + +I+ LCE + A L R++ + + D + +T+I +C++
Sbjct: 325 RSF---MPDSSLCCK-VIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEG 380
Query: 206 CVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCD 265
V++A L++E I P + TYNTLI G C G+L +A ++ M KP+ T +
Sbjct: 381 RVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYN 439
Query: 266 PLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDG 305
LI L K VK+ V+ M++ PN + L +G
Sbjct: 440 VLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEG 479
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 166/424 (39%), Gaps = 59/424 (13%)
Query: 18 YHSHSPRPFSHEAVNAVSSFHNMLSMRPA-PPITQFNNILGSLVR----MNHYPTAVSLS 72
YHS + A + V S M +R + PPI N+ L+R Y +++ +
Sbjct: 86 YHSILFKLSRARAFDPVESL--MADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIF 143
Query: 73 QQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQ-----PDTTALTTLMK 127
++ G+ + +L L+N N F ++ + K + + P+ L+K
Sbjct: 144 LRIPDFGVKRSVRSLNTLLNVLIQ----NQRFDLVHAMFKNSKESFGITPNIFTCNLLVK 199
Query: 128 GLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE 187
LC +I SA D++ + G + VTY ++ G+ +A ++L
Sbjct: 200 ALCKKNDIESAYKVLDEIPSMGLVPNL----VTYTTILGGYVARGDMESAKRVL------ 249
Query: 188 HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVG 247
EML + PD TY L+ G+C G+ +A
Sbjct: 250 ---------------------------EEMLDRGWYPDATTYTVLMDGYCKLGRFSEAAT 282
Query: 248 FFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC 307
+ M+ I+P+ T +I ALCKE+K +A ++ M++ S P+ + +ID C
Sbjct: 283 VMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALC 342
Query: 308 LINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAE 367
+++ +A L M PD + +I WLC + EA LF + I P
Sbjct: 343 EDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLL 401
Query: 368 TYSILIEGWLNLPHYMHAINLLAEM----CS-NGIAYTSKLDAICNDYNFDDEIEKFMRY 422
TY+ LI G A L +M C N Y ++ + + N + +
Sbjct: 402 TYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEM 461
Query: 423 KETG 426
E G
Sbjct: 462 LEIG 465
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 179/402 (44%), Gaps = 13/402 (3%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P + N +L + Y A+S + ++ + PD T I+I C LG+ + A
Sbjct: 113 GPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALD 172
Query: 106 VLGKIL-KRAY-QPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRF 163
+ + KRA +PD T++M + GEI + + + A+G + + V+Y
Sbjct: 173 LFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI----VSYNA 228
Query: 164 LINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKR 221
L+ G +G AL +L I++ DV Y ++ S + A +++ M +R
Sbjct: 229 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER 288
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
P+V TYN LI + + G L +AV F M+ + IKP+V + L+ A + +K +
Sbjct: 289 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVD 348
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
+V++A + N YN+ I Y ++ KA L +M + V D T+ I+IS
Sbjct: 349 TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 408
Query: 342 CTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG----- 396
C + EA+S M+ I E YS ++ + A ++ +M G
Sbjct: 409 CRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 468
Query: 397 IAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
IAYTS L A + E F+ + G + D + S ++
Sbjct: 469 IAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 510
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 159/395 (40%), Gaps = 43/395 (10%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F M P ++ ++ + R + A++L + IAP +T LIN
Sbjct: 34 FFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGS 93
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
G A V K+ PD ++ + A+++ + + KG + + D
Sbjct: 94 SGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM--KGAKVRPD- 150
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEEHT----DVQMYNTIIKSMCEDKCVSDAYD 212
+ T+ +I L ++G++ AL L + E+ DV + +I+ + +
Sbjct: 151 -TTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRA 209
Query: 213 LYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALC 272
++ M+ + + P++ +YN L+ + G A+ +K I PDV + L+++
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 269
Query: 273 KERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV- 331
+ R+ +A V M K +PNV YN LID Y + +A + M G+ P+V
Sbjct: 270 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 329
Query: 332 ----------------------------------HTYNIMISWLCTSNMMDEAMSLFHYM 357
YN I + +++A++L+ M
Sbjct: 330 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 389
Query: 358 DLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
K +K D+ T++ILI G + Y AI+ L EM
Sbjct: 390 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 424
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 157/383 (40%), Gaps = 43/383 (11%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIA--PDIATLTIL 90
A+S F M + P T FN I+ L ++ A+ L + K PD+ T T +
Sbjct: 135 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 194
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
++ + G + +V ++ +P+ + LM ++G +A++ D+K G
Sbjct: 195 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 254
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQ--LLRQIEEEHTDVQMYNTIIKSMCEDKCVS 208
V V+Y L+N + G A + L+ + E +V YN +I + + ++
Sbjct: 255 IPDV----VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 310
Query: 209 DAYDLYNEMLLKRISPDVFT-----------------------------------YNTLI 233
+A +++ +M I P+V + YN+ I
Sbjct: 311 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 370
Query: 234 YGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVE 293
+ +L KA+ + M+ + +K D T LI C+ K +A S + M S+
Sbjct: 371 GSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIP 430
Query: 294 PNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSL 353
+Y++++ Y Q+T+A + + M G PDV Y M+ S +A L
Sbjct: 431 LTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACEL 490
Query: 354 FHYMDLKDIKPDAETYSILIEGW 376
F M+ I+PD+ S L+ +
Sbjct: 491 FLEMEANGIEPDSIACSALMRAF 513
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 165/392 (42%), Gaps = 19/392 (4%)
Query: 53 NNILGSLVRM----NHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
N+I ++R+ N A L +++ PD T LIN G+ +A +++
Sbjct: 11 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 70
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
+L+ A P + L+ +G R A+ + G V VT+ +++
Sbjct: 71 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG----VGPDLVTHNIVLSAY 126
Query: 169 CEVGETGAALQL--LRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS--P 224
+ AL L + + D +N II + + S A DL+N M KR P
Sbjct: 127 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP 186
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
DV T+ ++++ + G++ F M E +KP++ + + L+ A A SV+
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
+ + + P+V Y L++ Y Q KA+ + M P+V TYN +I ++
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 306
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AY 399
+ EA+ +F M+ IKP+ + L+ ++ +L+ S GI AY
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 366
Query: 400 TSKLDAICNDYNFDDEIEKF--MRYKETGGDA 429
S + + N + I + MR K+ D+
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKKVKADS 398
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 168/380 (44%), Gaps = 8/380 (2%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S + A F M R P + +N ++ + AV + +Q+E GI P++ +
Sbjct: 271 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 330
Query: 87 L-TILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDV 145
+ T+L C ++N +VL R +T A + + E+ AI + +
Sbjct: 331 VCTLLAACSRSKKKVNVD-TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 389
Query: 146 KAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDV--QMYNTIIKSMCE 203
+ K +V SVT+ LI+ C + + A+ L+++E+ + ++Y++++ + +
Sbjct: 390 RKK----KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSK 445
Query: 204 DKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVST 263
V++A ++N+M + PDV Y ++++ + A + KA F M+ I+PD
Sbjct: 446 QGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIA 505
Query: 264 CDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMA 323
C L+ A K + ++ M + + ++ + + + +A L M
Sbjct: 506 CSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMD 565
Query: 324 TRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYM 383
+ + N M+ S ++ M LF+ + + + +TY+IL+E L + ++
Sbjct: 566 PYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWR 625
Query: 384 HAINLLAEMCSNGIAYTSKL 403
I +L M GI ++++
Sbjct: 626 KYIEVLEWMSGAGIQPSNQM 645
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 334 YNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMC 393
YN+MI N +D+A LF M KPDAETY LI + A+NL+ +M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 394 SNGIA-----YTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIVL 439
IA Y + ++A + N+ + +E + + G D L+ +IVL
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPD-LVTHNIVL 123
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 182/435 (41%), Gaps = 60/435 (13%)
Query: 8 FLSIPSLFMRYHSHSPRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPT 67
F IP + R+ S + + ++A+ S +M ++ P I FN L L R N
Sbjct: 75 FSLIPFTYSRFISGLCKVKKFDLIDALLS--DMETLGFIPDIWAFNVYLDLLCRENKVGF 132
Query: 68 AVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMK 127
AV + +G PD+ + TILIN G++ A + +++ PD A L+
Sbjct: 133 AVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVV 192
Query: 128 GLCLNGEIRSAINF-HDDVKAKGFQFQVDRVSVTYRFLINELCEVG--ETGAALQ----- 179
GLC ++ A +++K+ +V +V Y LI+ C+ G E AL+
Sbjct: 193 GLCHARKVDLAYEMVAEEIKSA----RVKLSTVVYNALISGFCKAGRIEKAEALKSYMSK 248
Query: 180 ---------------------LLRQIEEE---------HTDVQMYNTIIKSMCE----DK 205
+L++ E D YN ++K C DK
Sbjct: 249 IGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDK 308
Query: 206 CVSDAYDLYNEMLLKRISP----DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDV 261
C YN M+ K + P DV +Y+TLI FC RKA F M+ + + +V
Sbjct: 309 C-------YNFMV-KEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNV 360
Query: 262 STCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHT 321
T LI A +E A ++ M + + P+ Y T++D C + KA + +
Sbjct: 361 VTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFND 420
Query: 322 MATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPH 381
M +TPD +YN +IS LC S + EA+ LF M K+ PD T+ +I G +
Sbjct: 421 MIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKK 480
Query: 382 YMHAINLLAEMCSNG 396
A + +M G
Sbjct: 481 LSAAYKVWDQMMDKG 495
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 175/391 (44%), Gaps = 14/391 (3%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
NAV F M +N +G LVR + + A ++ ++ G + T + I
Sbjct: 27 NAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFI 86
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ C + + + ++L + + PD A + LC ++ A+ + +G +
Sbjct: 87 SGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGRE 146
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSD 209
V V+Y LIN L G+ A+++ + D + ++ +C + V
Sbjct: 147 PDV----VSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDL 202
Query: 210 AYDLYNEMLLK-RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
AY++ E + R+ YN LI GFC G++ KA + M +PD+ T + L+
Sbjct: 203 AYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLL 262
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA-RFLSHTMATRGV 327
+ +K+A V+A M+++ ++ + + YN L+ +C ++ K F+ M RG
Sbjct: 263 NYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF 322
Query: 328 TPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAIN 387
DV +Y+ +I C ++ +A LF M K + + TY+ LI+ +L + A
Sbjct: 323 C-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKK 381
Query: 388 LLAEMCSNGIA-----YTSKLDAICNDYNFD 413
LL +M G++ YT+ LD +C N D
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVD 412
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 12/291 (4%)
Query: 144 DVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSM 201
D+K GF + TY I+ LC+V + LL +E D+ +N + +
Sbjct: 69 DMKPMGFSL----IPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLL 124
Query: 202 CEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDV 261
C + V A + M+ + PDV +Y LI G G++ AV +N M + PD
Sbjct: 125 CRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDN 184
Query: 262 STCDPLIHALCKERKVKQANSVVAAMIK-ASVEPNVFIYNTLIDGYCLINQMTKARFLSH 320
C L+ LC RKV A +VA IK A V+ + +YN LI G+C ++ KA L
Sbjct: 185 KACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKS 244
Query: 321 TMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLP 380
M+ G PD+ TYN+++++ +NM+ A + M I+ DA +Y+ L++ +
Sbjct: 245 YMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVS 304
Query: 381 HYMHAIN-LLAEMCSNG----IAYTSKLDAICNDYNFDDEIEKFMRYKETG 426
H N ++ EM G ++Y++ ++ C N F ++ G
Sbjct: 305 HPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKG 355
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 124/281 (44%), Gaps = 8/281 (2%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
E A+ S+ M + P + +N +L N A + ++ GI D +
Sbjct: 237 EKAEALKSY--MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYN 294
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
L+ C + + ++ + K ++ D + +TL++ C R A ++++ K
Sbjct: 295 QLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQK 354
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKC 206
G V VTY LI G + A +LL Q+ E D Y TI+ +C+
Sbjct: 355 GMVMNV----VTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGN 410
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
V AY ++N+M+ I+PD +YN+LI G C G++ +A+ F MK + PD T
Sbjct: 411 VDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKF 470
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC 307
+I L + +K+ A V M+ + + +TLI C
Sbjct: 471 IIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 128/305 (41%), Gaps = 8/305 (2%)
Query: 42 SMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMN 101
S R +N ++ + A +L + G PD+ T +L+N + +
Sbjct: 213 SARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLK 272
Query: 102 YAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFH-DDVKAKGFQFQVDRVSVT 160
A V+ ++++ Q D + L+K C NF +++ +GF D VS
Sbjct: 273 RAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF---CDVVS-- 327
Query: 161 YRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEML 218
Y LI C T A +L ++ ++ +V Y ++IK+ + S A L ++M
Sbjct: 328 YSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMT 387
Query: 219 LKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVK 278
+SPD Y T++ C G + KA G FN M I PD + + LI LC+ +V
Sbjct: 388 ELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVT 447
Query: 279 QANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMI 338
+A + M P+ + +I G +++ A + M +G T D + +I
Sbjct: 448 EAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Query: 339 SWLCT 343
C+
Sbjct: 508 KASCS 512
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 160/353 (45%), Gaps = 15/353 (4%)
Query: 80 IAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAI 139
+ P++ T T L++ C LG+++ ++ ++ ++ D + + G G + A+
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDAL 262
Query: 140 NFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQM--YNTI 197
++ KG ++R V+Y LI+ L + G AL LL ++ +E + + Y I
Sbjct: 263 MQDREMVEKG----MNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAI 318
Query: 198 IKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENI 257
I+ +C+ + +A+ L+N +L I D F Y TLI G C G L +A M+ I
Sbjct: 319 IRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGI 378
Query: 258 KPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARF 317
+P + T + +I+ LC +V +A+ V ++ +V Y+TL+D Y + +
Sbjct: 379 QPSILTYNTVINGLCMAGRVSEADEVSKGVV-----GDVITYSTLLDSYIKVQNIDAVLE 433
Query: 318 LSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWL 377
+ + D+ NI++ EA +L+ M D+ PD TY+ +I+G+
Sbjct: 434 IRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYC 493
Query: 378 NLPHYMHAINLLAEM----CSNGIAYTSKLDAICNDYNFDDEIEKFMRYKETG 426
A+ + E+ S + Y +DA+C D E + E G
Sbjct: 494 KTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKG 546
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 145/307 (47%), Gaps = 12/307 (3%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRA--YQPDTTALTTLMKGLCLNGEIR 136
G P T LI F G M+ A VL + + Y D + ++ G C G+
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 137 SAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMY 194
A+ F + G VTY L++ LC++G+ L+R++E+E D Y
Sbjct: 189 LALGFFESAVDSGVLVPN---LVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFY 245
Query: 195 NTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKM 254
+ I + + DA EM+ K ++ DV +Y+ LI G G + +A+G M
Sbjct: 246 SNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIK 305
Query: 255 ENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTK 314
E ++P++ T +I LCK K+++A + ++ +E + F+Y TLIDG C + +
Sbjct: 306 EGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNR 365
Query: 315 ARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIE 374
A + M RG+ P + TYN +I+ LC + + EA + K + D TYS L++
Sbjct: 366 AFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVS-----KGVVGDVITYSTLLD 420
Query: 375 GWLNLPH 381
++ + +
Sbjct: 421 SYIKVQN 427
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 156/347 (44%), Gaps = 15/347 (4%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+N I+ +L + TA + +L KG+ DI T L++ G +LG +
Sbjct: 519 YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDK---GILGLVY 575
Query: 112 KRAYQPDTTALTTLMKG---LCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
L L LC G +AI + ++ KG V S + L++ L
Sbjct: 576 GLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLT--VTFPSTILKTLVDNL 633
Query: 169 CEVGETGAALQLLRQIEE--EHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
+ A L ++ E DV Y II +C++ + A +L + + ++ +
Sbjct: 634 RSLD---AYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNT 690
Query: 227 FTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAA 286
TYN+LI G C G L +A+ F+ ++ + P T LI LCKE A ++ +
Sbjct: 691 ITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDS 750
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKA-RFLSHTMATRGVTPDVHTYNIMISWLCTSN 345
M+ + PN+ IYN+++DGYC + Q A R +S M R VTPD T + MI C
Sbjct: 751 MVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGR-VTPDAFTVSSMIKGYCKKG 809
Query: 346 MMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
M+EA+S+F K+I D + LI+G+ A LL EM
Sbjct: 810 DMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 141/308 (45%), Gaps = 8/308 (2%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
V+A+ M+ + ++ ++ L + + A+ L ++ +G+ P++ T T +
Sbjct: 259 VDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAI 318
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
I C +G++ AF + +IL + D TL+ G+C G + A + D++ +G
Sbjct: 319 IRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGI 378
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDA 210
Q + +TY +IN LC G A ++ + + DV Y+T++ S + + +
Sbjct: 379 QPSI----LTYNTVINGLCMAGRVSEADEVSKGV---VGDVITYSTLLDSYIKVQNIDAV 431
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
++ L +I D+ N L+ F G +A + M ++ PD +T +I
Sbjct: 432 LEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKG 491
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
CK ++++A + + K+SV V YN +ID C + A + + +G+ D
Sbjct: 492 YCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIELWEKGLYLD 550
Query: 331 VHTYNIMI 338
+HT ++
Sbjct: 551 IHTSRTLL 558
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 156/384 (40%), Gaps = 45/384 (11%)
Query: 53 NNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILK 112
N +L + + M Y A +L + + + PD AT +I +C G++ A + + L+
Sbjct: 451 NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNE-LR 509
Query: 113 RAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVG 172
++ ++ LC G + +A ++ KG + T R L++ + G
Sbjct: 510 KSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIH----TSRTLLHSIHANG 565
Query: 173 ETGAALQLLRQIEEEHTDV--QMYNTIIKSMCEDKCVSDAYDLYNEMLLKR--------- 221
L L+ +E+ ++DV M N I +C+ A ++Y M+++R
Sbjct: 566 GDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVY--MIMRRKGLTVTFPS 623
Query: 222 ---------------------------ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKM 254
S DV Y +I G C G L KA+ + K
Sbjct: 624 TILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKS 683
Query: 255 ENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTK 314
+ + T + LI+ LC++ + +A + ++ + P+ Y LID C
Sbjct: 684 RGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLD 743
Query: 315 ARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIE 374
A L +M ++G+ P++ YN ++ C ++AM + + + PDA T S +I+
Sbjct: 744 AEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIK 803
Query: 375 GWLNLPHYMHAINLLAEMCSNGIA 398
G+ A+++ E I+
Sbjct: 804 GYCKKGDMEEALSVFTEFKDKNIS 827
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 182/449 (40%), Gaps = 50/449 (11%)
Query: 36 SFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFC 95
S ++L +P + + L L R+ + + QL+ K I + +I+ F
Sbjct: 13 SLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFL 72
Query: 96 HLGRMNYAFSVLG-KILKRAYQPDTTALTTLMKGLCLNGE--IRSAINFHDDVKAKG-FQ 151
+L R A + I K + P T L +L+ G + + + + D ++ G F
Sbjct: 73 NLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFP 132
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYN----TIIKSMCEDKCV 207
+ S+ YRF+ E GE A+++L + ++ + N +I C+
Sbjct: 133 SSLTFCSLIYRFV-----EKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKP 187
Query: 208 SDAYDLYNEMLLKRI-SPDVFTYNTL---------------------------------- 232
A + + + P++ TY TL
Sbjct: 188 ELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSN 247
Query: 233 -IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKAS 291
I+G+ GG L A+ M + + DV + LI L KE V++A ++ MIK
Sbjct: 248 WIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEG 307
Query: 292 VEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAM 351
VEPN+ Y +I G C + ++ +A L + + + G+ D Y +I +C ++ A
Sbjct: 308 VEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAF 367
Query: 352 SLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKLDAICNDYN 411
S+ M+ + I+P TY+ +I G A + + + I Y++ LD+ N
Sbjct: 368 SMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQN 427
Query: 412 FDDEIEKFMRYKETGGDADFLIASHIVLR 440
D +E R+ E D L+ +I+L+
Sbjct: 428 IDAVLEIRRRFLEAKIPMD-LVMCNILLK 455
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 132/311 (42%), Gaps = 49/311 (15%)
Query: 83 DIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFH 142
D+ TI+IN C G + A ++ R +T +L+ GLC G + A+
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 143 DDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKS 200
D ++ G VTY LI+ LC+ G A +LL + + ++ +YN+I+
Sbjct: 714 DSLENIGLVPS----EVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDG 769
Query: 201 MCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPD 260
C+ DA + + ++ R++PD FT +++I G+C G + +A+ F K +NI D
Sbjct: 770 YCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD 829
Query: 261 VSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTL---------IDGYCL--- 308
LI C + ++++A ++ M+ + E V + N + I G+ +
Sbjct: 830 FFGFLFLIKGFCTKGRMEEARGLLREMLVS--ESVVKLINRVDAELAESESIRGFLVELC 887
Query: 309 -------------------------INQMTKARFLS----HTMATRGVTPDVHTYNIMIS 339
+ + +FL+ + + D H+ + +S
Sbjct: 888 EQGRVPQAIKILDEISSTIYPSGKNLGSYQRLQFLNDVNEEEIKKKDYVHDFHSLHSTVS 947
Query: 340 WLCTSNMMDEA 350
LCTS +++A
Sbjct: 948 SLCTSGKLEQA 958
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 114/276 (41%), Gaps = 34/276 (12%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
V A+ F ++ ++ P + ++ +L + + A L + KG+ P+I +
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSI 766
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
++ +C LG+ A V+ + + PD +++++KG C G++ A++ + K K
Sbjct: 767 VDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTI------------- 197
+ FLI C G A LLR++ + V++ N +
Sbjct: 827 SADF----FGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGF 882
Query: 198 IKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENI 257
+ +CE V A + +E IS ++ + + + + F N + E I
Sbjct: 883 LVELCEQGRVPQAIKILDE-----ISSTIYPSGKNLGSY-------QRLQFLNDVNEEEI 930
Query: 258 KP-----DVSTCDPLIHALCKERKVKQANSVVAAMI 288
K D + + +LC K++QAN V +++
Sbjct: 931 KKKDYVHDFHSLHSTVSSLCTSGKLEQANEFVMSVL 966
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 147/300 (49%), Gaps = 6/300 (2%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
GI PDI T + L+N FC + A V G++ K + D T L+ LC N + A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNT 196
+ +K +G V VTY LI LC+ G A + L +++ + + +V ++
Sbjct: 68 LEVLKRMKDRGISPNV----VTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN 256
+I + + +S +Y M+ I P+VFTY++LIYG C ++ +A+ ++M +
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKAR 316
P+V T L + K +V ++ M + V N NTLI GY ++ A
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 317 FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
+ M + G+ P++ +YNI+++ L + +++A+S F +M D TY+I+I G
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGM 303
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 153/329 (46%), Gaps = 42/329 (12%)
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
K++K +PD ++L+ G CL+ I+ A+ ++ G +
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIK----------------- 45
Query: 169 CEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFT 228
DV + +I ++C+++ V A ++ M + ISP+V T
Sbjct: 46 --------------------RDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVT 85
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
Y++LI G C G+L A + M + I P+V T LI A K K+ + +SV MI
Sbjct: 86 YSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI 145
Query: 289 KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMD 348
+ S++PNVF Y++LI G C+ N++ +A + M ++G TP+V TY+ + + S+ +D
Sbjct: 146 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 205
Query: 349 EAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKL 403
+ + L M + + + + + LI+G+ A+ + M SNG+ +Y L
Sbjct: 206 DGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVL 265
Query: 404 DAICNDYNFDDEIEKFMRYKETGGDADFL 432
+ + + + +F ++T D D +
Sbjct: 266 AGLFANGEVEKALSRFEHMQKTRNDLDII 294
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 158/338 (46%), Gaps = 10/338 (2%)
Query: 40 MLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGR 99
M+ + P I ++++ N AV ++ Q+E GI D+ TILI+ C
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 100 MNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSV 159
+ A VL ++ R P+ ++L+ GLC +G + A ++ +K V +
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV----I 119
Query: 160 TYRFLINELCEVGETGAALQLLRQIEEEHTD--VQMYNTIIKSMCEDKCVSDAYDLYNEM 217
T+ LI+ + G+ + + + + D V Y+++I +C V +A + + M
Sbjct: 120 TFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM 179
Query: 218 LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
+ K +P+V TY+TL GF ++ + + M + + +C+ LI + K+
Sbjct: 180 ISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKI 239
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA--RFLSHTMATRGVTPDVHTYN 335
A V M + PN+ YN ++ G ++ KA RF H TR D+ TY
Sbjct: 240 DLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRF-EHMQKTRN-DLDIITYT 297
Query: 336 IMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
IMI +C + M+ EA LF+ + K ++PD + Y+I+I
Sbjct: 298 IMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 139/326 (42%), Gaps = 37/326 (11%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
V A+ M +P + +++++ L + A +++ K I P++ T + L
Sbjct: 65 VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSAL 124
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
I+ + G+++ SV +++ + P+ ++L+ GLC++ + AI D + +KG
Sbjct: 125 IDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG- 183
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDA 210
C +V Y+T+ + V D
Sbjct: 184 ------------------CT------------------PNVVTYSTLANGFFKSSRVDDG 207
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
L ++M + ++ + + NTLI G+ G++ A+G F M + P++ + + ++
Sbjct: 208 IKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAG 267
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
L +V++A S M K + ++ Y +I G C + +A L + + + V PD
Sbjct: 268 LFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPD 327
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHY 356
Y IMI+ L + M EA +L +
Sbjct: 328 FKAYTIMIAELNRAGMRTEADALNRF 353
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 170/398 (42%), Gaps = 49/398 (12%)
Query: 69 VSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRA-------------- 114
++L + G++P+ LT I+ C R N A+ +L ++K
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 115 ---------------------YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK----G 149
+PD L L+ LC + + A+ + ++ K G
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 150 FQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT---DVQMYNTIIKSMCEDKC 206
+ D S+ + LI+ LC+VG A +LL +++ E + YN +I C
Sbjct: 364 NVIKAD--SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGK 421
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+ A ++ + M I P+V T NT++ G C L AV FF M+ E +K +V T
Sbjct: 422 LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMT 481
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
LIHA C V++A M++A P+ IY LI G C + + A + + G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
+ D+ YN++I C N ++ + M+ + KPD+ TY+ LI + +
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 387 NLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKF 419
++ +M +G+ Y + +DA C+ D+ ++ F
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 189/451 (41%), Gaps = 63/451 (13%)
Query: 2 SLFRSRFLS---IPSLFMRYHSHSPRPFSHEAVNAVSSF---------HNMLS--MRPAP 47
+++ R L+ I +L R+ SH P S +SS ++LS M+
Sbjct: 231 EVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKT 290
Query: 48 PITQ--FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P+ FN +L L R L +++ I PD+ TL ILIN C R++ A
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 106 VLGKILKR------AYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSV 159
V ++ + + D+ TL+ GLC G ++ A +K + + +V
Sbjct: 351 VFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK---LEERCVPNAV 407
Query: 160 TYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEM 217
TY LI+ C G+ A +++ +++E+ +V NTI+ MC ++ A + +M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 218 LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
+ + +V TY TLI+ C+ + KA+ ++ M PD LI LC+ R+
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIM 337
A VV + + ++ YN LI +C N K + M G PD TYN +
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 338 ISWL-----------------------------------CTSNMMDEAMSLFHYMDL-KD 361
IS+ C+ +DEA+ LF M L
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSK 647
Query: 362 IKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
+ P+ Y+ILI + L ++ A++L EM
Sbjct: 648 VNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 151/362 (41%), Gaps = 43/362 (11%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKG-IAPDIATLTILINCFCHLGRMNYAFSVLGKI 110
FN ++ L ++ A L +++L+ P+ T LI+ +C G++ A V+ ++
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 111 LKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCE 170
+ +P+ + T++ G+C + + A+ F D++ +G + V VTY LI+ C
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV----VTYMTLIHACCS 488
Query: 171 VG-------------ETG---------AALQLLRQIEEEHT---------------DVQM 193
V E G A + L Q+ +H D+
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
YN +I C+ Y++ +M + PD TYNTLI F M+
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAM-IKASVEPNVFIYNTLIDGYCLINQM 312
+ + P V+T +I A C ++ +A + M + + V PN IYN LI+ + +
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNF 668
Query: 313 TKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSIL 372
+A L M + V P+V TYN + L + + L M + +P+ T IL
Sbjct: 669 GQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEIL 728
Query: 373 IE 374
+E
Sbjct: 729 ME 730
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 122/308 (39%), Gaps = 42/308 (13%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + N I+G + R + AV +E +G+ ++ T LI+ C + + A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
K+L+ PD L+ GLC AI + +K GF + + Y LI
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL----LAYNMLIG 554
Query: 167 ELCEVGETGAALQLLRQIEEE------------------HTD------------------ 190
C+ ++L +E+E H D
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 191 -VQMYNTIIKSMCEDKCVSDAYDLYNEMLL-KRISPDVFTYNTLIYGFCAGGQLRKAVGF 248
V Y +I + C + +A L+ +M L +++P+ YN LI F G +A+
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Query: 249 FNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCL 308
MKM+ ++P+V T + L L ++ + + ++ M++ S EPN L++
Sbjct: 675 KEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSG 734
Query: 309 INQMTKAR 316
+++ K R
Sbjct: 735 SDELVKLR 742
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 120/298 (40%), Gaps = 20/298 (6%)
Query: 159 VTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEML 218
V + LI +G ++ + +++ + Q+ N ++ + + V DA+ + +EML
Sbjct: 153 VATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEML 212
Query: 219 LKR--ISPDVFTYNTLIYGFCAGGQL--RKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
K P+ T + +++ L K + + + P+ I +LCK
Sbjct: 213 QKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKN 272
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARF--LSHTMATRGVTPDVH 332
+ A +++ ++K +N L+ CL M +R L M + PDV
Sbjct: 273 ARANTAWDILSDLMKNKTPLEAPPFNALLS--CLGRNMDISRMNDLVLKMDEVKIRPDVV 330
Query: 333 TYNIMISWLCTSNMMDEAMSLFHYM------DLKDIKPDAETYSILIEGWLNLPHYMHAI 386
T I+I+ LC S +DEA+ +F M D IK D+ ++ LI+G + A
Sbjct: 331 TLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAE 390
Query: 387 NLLAEM------CSNGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
LL M N + Y +D C + E R KE + + + IV
Sbjct: 391 ELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 170/398 (42%), Gaps = 49/398 (12%)
Query: 69 VSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRA-------------- 114
++L + G++P+ LT I+ C R N A+ +L ++K
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 115 ---------------------YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK----G 149
+PD L L+ LC + + A+ + ++ K G
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDG 363
Query: 150 FQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT---DVQMYNTIIKSMCEDKC 206
+ D S+ + LI+ LC+VG A +LL +++ E + YN +I C
Sbjct: 364 NVIKAD--SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGK 421
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+ A ++ + M I P+V T NT++ G C L AV FF M+ E +K +V T
Sbjct: 422 LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMT 481
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
LIHA C V++A M++A P+ IY LI G C + + A + + G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
+ D+ YN++I C N ++ + M+ + KPD+ TY+ LI + +
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 387 NLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKF 419
++ +M +G+ Y + +DA C+ D+ ++ F
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 189/451 (41%), Gaps = 63/451 (13%)
Query: 2 SLFRSRFLS---IPSLFMRYHSHSPRPFSHEAVNAVSSF---------HNMLS--MRPAP 47
+++ R L+ I +L R+ SH P S +SS ++LS M+
Sbjct: 231 EVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKT 290
Query: 48 PITQ--FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P+ FN +L L R L +++ I PD+ TL ILIN C R++ A
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 106 VLGKILKR------AYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSV 159
V K+ + + D+ TL+ GLC G ++ A +K + + +V
Sbjct: 351 VFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK---LEERCAPNAV 407
Query: 160 TYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEM 217
TY LI+ C G+ A +++ +++E+ +V NTI+ MC ++ A + +M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 218 LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
+ + +V TY TLI+ C+ + KA+ ++ M PD LI LC+ R+
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIM 337
A VV + + ++ YN LI +C N K + M G PD TYN +
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 338 ISWL-----------------------------------CTSNMMDEAMSLFHYMDL-KD 361
IS+ C+ +DEA+ LF M L
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSK 647
Query: 362 IKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
+ P+ Y+ILI + L ++ A++L EM
Sbjct: 648 VNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 152/362 (41%), Gaps = 43/362 (11%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKG-IAPDIATLTILINCFCHLGRMNYAFSVLGKI 110
FN ++ L ++ A L +++L+ AP+ T LI+ +C G++ A V+ ++
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 111 LKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCE 170
+ +P+ + T++ G+C + + A+ F D++ +G + V VTY LI+ C
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV----VTYMTLIHACCS 488
Query: 171 VG-------------ETG---------AALQLLRQIEEEHT---------------DVQM 193
V E G A + L Q+ +H D+
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
YN +I C+ Y++ +M + PD TYNTLI F M+
Sbjct: 549 YNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAM-IKASVEPNVFIYNTLIDGYCLINQM 312
+ + P V+T +I A C ++ +A + M + + V PN IYN LI+ + +
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNF 668
Query: 313 TKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSIL 372
+A L M + V P+V TYN + L + + L M + +P+ T IL
Sbjct: 669 GQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEIL 728
Query: 373 IE 374
+E
Sbjct: 729 ME 730
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 123/308 (39%), Gaps = 42/308 (13%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + N I+G + R + AV +E +G+ ++ T LI+ C + + A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
K+L+ PD L+ GLC AI + +K GF + + Y LI
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL----LAYNMLIG 554
Query: 167 ELCEVGETGAALQLLRQIEEE------------------HTD------------------ 190
C+ T ++L +E+E H D
Sbjct: 555 LFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 191 -VQMYNTIIKSMCEDKCVSDAYDLYNEMLL-KRISPDVFTYNTLIYGFCAGGQLRKAVGF 248
V Y +I + C + +A L+ +M L +++P+ YN LI F G +A+
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Query: 249 FNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCL 308
MKM+ ++P+V T + L L ++ + + ++ M++ S EPN L++
Sbjct: 675 KEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSG 734
Query: 309 INQMTKAR 316
+++ K R
Sbjct: 735 SDELVKLR 742
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 122/298 (40%), Gaps = 20/298 (6%)
Query: 159 VTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEML 218
V LI +G ++ + +++ + Q+ N ++ + + V DA+ + +EML
Sbjct: 153 VATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEML 212
Query: 219 LKR--ISPDVFTYNTLIYGFCAGGQL--RKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
K P+ T + +++ G L K + + + P+ I +LCK
Sbjct: 213 QKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKN 272
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARF--LSHTMATRGVTPDVH 332
+ A +++ ++K +N L+ CL M +R L M + PDV
Sbjct: 273 ARANAAWDILSDLMKNKTPLEAPPFNALLS--CLGRNMDISRMNDLVLKMDEVKIRPDVV 330
Query: 333 TYNIMISWLCTSNMMDEAMSLFHYM------DLKDIKPDAETYSILIEGWLNLPHYMHAI 386
T I+I+ LC S +DEA+ +F M D IK D+ ++ LI+G + A
Sbjct: 331 TLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAE 390
Query: 387 NLLAEM-----CS-NGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
LL M C+ N + Y +D C + E R KE + + + IV
Sbjct: 391 ELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 170/398 (42%), Gaps = 49/398 (12%)
Query: 69 VSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRA-------------- 114
++L + G++P+ LT I+ C R N A+ +L ++K
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 115 ---------------------YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK----G 149
+PD L L+ LC + + A+ + ++ K G
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 150 FQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT---DVQMYNTIIKSMCEDKC 206
+ D S+ + LI+ LC+VG A +LL +++ E + YN +I C
Sbjct: 364 NVIKAD--SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGK 421
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+ A ++ + M I P+V T NT++ G C L AV FF M+ E +K +V T
Sbjct: 422 LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMT 481
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
LIHA C V++A M++A P+ IY LI G C + + A + + G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
+ D+ YN++I C N ++ + M+ + KPD+ TY+ LI + +
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 387 NLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKF 419
++ +M +G+ Y + +DA C+ D+ ++ F
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 189/451 (41%), Gaps = 63/451 (13%)
Query: 2 SLFRSRFLS---IPSLFMRYHSHSPRPFSHEAVNAVSSF---------HNMLS--MRPAP 47
+++ R L+ I +L R+ SH P S +SS ++LS M+
Sbjct: 231 EVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKT 290
Query: 48 PITQ--FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P+ FN +L L R L +++ I PD+ TL ILIN C R++ A
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 106 VLGKILKR------AYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSV 159
V ++ + + D+ TL+ GLC G ++ A +K + + +V
Sbjct: 351 VFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK---LEERCVPNAV 407
Query: 160 TYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEM 217
TY LI+ C G+ A +++ +++E+ +V NTI+ MC ++ A + +M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 218 LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
+ + +V TY TLI+ C+ + KA+ ++ M PD LI LC+ R+
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIM 337
A VV + + ++ YN LI +C N K + M G PD TYN +
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 338 ISWL-----------------------------------CTSNMMDEAMSLFHYMDL-KD 361
IS+ C+ +DEA+ LF M L
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSK 647
Query: 362 IKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
+ P+ Y+ILI + L ++ A++L EM
Sbjct: 648 VNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 152/327 (46%), Gaps = 8/327 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKG-IAPDIATLTILINCFCHLGRMNYAFSVLGKI 110
FN ++ L ++ A L +++L+ P+ T LI+ +C G++ A V+ ++
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 111 LKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCE 170
+ +P+ + T++ G+C + + A+ F D++ +G + V VTY LI+ C
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV----VTYMTLIHACCS 488
Query: 171 VGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFT 228
V A+ ++ E D ++Y +I +C+ + DA + ++ S D+
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
YN LI FC K M+ E KPD T + LI K + + ++ M
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 289 KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG-VTPDVHTYNIMISWLCTSNMM 347
+ ++P V Y +ID YC + ++ +A L M V P+ YNI+I+
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNF 668
Query: 348 DEAMSLFHYMDLKDIKPDAETYSILIE 374
+A+SL M +K ++P+ ETY+ L +
Sbjct: 669 GQALSLKEEMKMKMVRPNVETYNALFK 695
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 120/298 (40%), Gaps = 20/298 (6%)
Query: 159 VTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEML 218
V + LI +G ++ + +++ + Q+ N ++ + + V DA+ + +EML
Sbjct: 153 VATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEML 212
Query: 219 LKR--ISPDVFTYNTLIYGFCAGGQL--RKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
K P+ T + +++ L K + + + P+ I +LCK
Sbjct: 213 QKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKN 272
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARF--LSHTMATRGVTPDVH 332
+ A +++ ++K +N L+ CL M +R L M + PDV
Sbjct: 273 ARANTAWDILSDLMKNKTPLEAPPFNALLS--CLGRNMDISRMNDLVLKMDEVKIRPDVV 330
Query: 333 TYNIMISWLCTSNMMDEAMSLFHYM------DLKDIKPDAETYSILIEGWLNLPHYMHAI 386
T I+I+ LC S +DEA+ +F M D IK D+ ++ LI+G + A
Sbjct: 331 TLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAE 390
Query: 387 NLLAEM------CSNGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
LL M N + Y +D C + E R KE + + + IV
Sbjct: 391 ELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 7/199 (3%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
+ ML +P + ++ L ++ A+ + ++L+ G + D+ +LI FC
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
+ +L + K +PD+ TL+ + + S + ++ G D
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL----DP 614
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQI---EEEHTDVQMYNTIIKSMCEDKCVSDAYDL 213
TY +I+ C VGE AL+L + + + + + +YN +I + + A L
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Query: 214 YNEMLLKRISPDVFTYNTL 232
EM +K + P+V TYN L
Sbjct: 675 KEEMKMKMVRPNVETYNAL 693
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 163/365 (44%), Gaps = 6/365 (1%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A S F+ ++ P + + ++ +L R H+ + +SL ++E G+ PD +IN
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN 397
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
G ++ A + K+ + +P + TL+KG G++ + D +
Sbjct: 398 ASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQ 457
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEE--EHTDVQMYNTIIKSMCEDKCVSDA 210
DR T L+ C + A ++ +++ DV +NT+ K+ A
Sbjct: 458 PNDR---TCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTA 514
Query: 211 YDLY-NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
D+ ML ++ P+V T T++ G+C G++ +A+ FF MK + P++ + LI
Sbjct: 515 EDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIK 574
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
+ VV M + V+P+V ++TL++ + + M + + M G+ P
Sbjct: 575 GFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDP 634
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLL 389
D+H ++I+ + ++A + + M ++P+ Y+ +I GW + A+ +
Sbjct: 635 DIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVY 694
Query: 390 AEMCS 394
+MC
Sbjct: 695 KKMCG 699
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 166/390 (42%), Gaps = 53/390 (13%)
Query: 83 DIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFH 142
D+ + T L+N GR A S+ +++ ++P TTL+ L S ++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 143 DDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE---------HTDVQM 193
V+ G + ++ + +IN E G A+++ +++E +T ++
Sbjct: 378 SKVEKNGLKPD----TILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKG 433
Query: 194 Y-----------------------------NTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
Y N ++++ C + + +A+++ +M + P
Sbjct: 434 YGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKP 493
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN-IKPDVSTCDPLIHALCKERKVKQANSV 283
DV T+NTL + G A + N +KP+V TC +++ C+E K+++A
Sbjct: 494 DVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRF 553
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
M + V PN+F++N+LI G+ IN M + M GV PDV T++ +++ +
Sbjct: 554 FYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSS 613
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA----- 398
M ++ M I PD +SIL +G+ A +L +M G+
Sbjct: 614 VGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVI 673
Query: 399 YTSKLDAICNDYNFDDEIEKFMR-YKETGG 427
YT + C+ E++K M+ YK+ G
Sbjct: 674 YTQIISGWCS----AGEMKKAMQVYKKMCG 699
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 16/267 (5%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFS-VLGKILKRAYQPDTTALTTLMKGLCLNGEIRS 137
G+ PD+ T L + +G A ++ ++L +P+ T++ G C G++
Sbjct: 490 GVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEE 549
Query: 138 AINFHDDVKAKG-----FQFQVDRVSVTYRFL-INELCEVGETGAALQLLRQIEEEHTDV 191
A+ F +K G F F S+ FL IN++ VGE + L+ + + DV
Sbjct: 550 ALRFFYRMKELGVHPNLFVFN----SLIKGFLNINDMDGVGEV---VDLMEEFGVK-PDV 601
Query: 192 QMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNV 251
++T++ + + ++Y +ML I PD+ ++ L G+ G+ KA N
Sbjct: 602 VTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ 661
Query: 252 MKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK-ASVEPNVFIYNTLIDGYCLIN 310
M+ ++P+V +I C ++K+A V M + PN+ Y TLI G+
Sbjct: 662 MRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAK 721
Query: 311 QMTKARFLSHTMATRGVTPDVHTYNIM 337
Q KA L M + V P T ++
Sbjct: 722 QPWKAEELLKDMEGKNVVPTRKTMQLI 748
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 114/256 (44%), Gaps = 7/256 (2%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
DV+ ++ + E +A+ ++N ++ + P + TY TL+ +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
+ ++ +KPD + +I+A + + QA + M ++ +P +NTLI GY I
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 310 NQMTK-ARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAET 368
++ + +R L + + P+ T NI++ C ++EA ++ + M +KPD T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 369 YSILIEGWLNLPHYMHAINL-LAEMCSNGIAYTSK-----LDAICNDYNFDDEIEKFMRY 422
++ L + + + A ++ + M N + + ++ C + ++ + F R
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 423 KETGGDADFLIASHIV 438
KE G + + + ++
Sbjct: 558 KELGVHPNLFVFNSLI 573
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 36/231 (15%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+ F+ M + P + FN+++ + +N + +E G+ PD+ T + L+N
Sbjct: 550 ALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMN 609
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
+ +G M + +L+ PD A + L KG GE A + ++ G +
Sbjct: 610 AWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRP 669
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYD 212
V V Y +I+ C GE A+Q + K MC
Sbjct: 670 NV----VIYTQIISGWCSAGEMKKAMQ-----------------VYKKMCG--------- 699
Query: 213 LYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVST 263
+ +SP++ TY TLI+GF Q KA M+ +N+ P T
Sbjct: 700 ------IVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKT 744
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 136/284 (47%), Gaps = 7/284 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+NN+L SL R L ++ ++PDI T L+N +C LG + A + ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+ PD T+ + G C E+ +A ++ G R V+Y LI L E
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNG----CHRNEVSYTQLIYGLFEA 238
Query: 172 GETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
+ AL LL ++++++ +V+ Y +I ++C S+A +L+ +M I PD Y
Sbjct: 239 KKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMY 298
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
LI FC+G L +A G M + P+V T + LI CK + V +A +++ M++
Sbjct: 299 TVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLE 357
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHT 333
++ P++ YNTLI G C + A L M G+ P+ T
Sbjct: 358 QNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 111/255 (43%), Gaps = 10/255 (3%)
Query: 158 SVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEM 217
SV + + C G + ++ ++ + YN ++ S+ V + LY EM
Sbjct: 92 SVRDALFVVDFCRTMRKGDSFEIKYKLTP-----KCYNNLLSSLARFGLVEEMKRLYTEM 146
Query: 218 LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
L +SPD++T+NTL+ G+C G + +A + + PD T I C+ ++V
Sbjct: 147 LEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEV 206
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIM 337
A V M + N Y LI G ++ +A L M P+V TY ++
Sbjct: 207 DAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVL 266
Query: 338 ISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG- 396
I LC S EAM+LF M IKPD Y++LI+ + + A LL M NG
Sbjct: 267 IDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGL 326
Query: 397 ----IAYTSKLDAIC 407
I Y + + C
Sbjct: 327 MPNVITYNALIKGFC 341
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 8/288 (2%)
Query: 146 KAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCE 203
K F+ + Y L++ L G +L ++ E+ D+ +NT++ C+
Sbjct: 108 KGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCK 167
Query: 204 DKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVST 263
V +A ++ PD FTY + I G C ++ A F M + +
Sbjct: 168 LGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVS 227
Query: 264 CDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMA 323
LI+ L + +K+ +A S++ M + PNV Y LID C Q ++A L M+
Sbjct: 228 YTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMS 287
Query: 324 TRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYM 383
G+ PD Y ++I C+ + +DEA L +M + P+ TY+ LI+G+ +
Sbjct: 288 ESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVH 346
Query: 384 HAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYKETG 426
A+ LL++M I Y + + C+ N D +E+G
Sbjct: 347 KAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESG 394
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 115/241 (47%), Gaps = 3/241 (1%)
Query: 160 TYRFLINELCEVGETGAALQLLRQIEEEHTDVQ--MYNTIIKSMCEDKCVSDAYDLYNEM 217
T+ L+N C++G A Q + + + D Y + I C K V A+ ++ EM
Sbjct: 157 TFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEM 216
Query: 218 LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
+ +Y LIYG ++ +A+ MK +N P+V T LI ALC +
Sbjct: 217 TQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQK 276
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIM 337
+A ++ M ++ ++P+ +Y LI +C + + +A L M G+ P+V TYN +
Sbjct: 277 SEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNAL 336
Query: 338 ISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
I C N+ +AM L M +++ PD TY+ LI G + + A LL+ M +G+
Sbjct: 337 IKGFCKKNV-HKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGL 395
Query: 398 A 398
Sbjct: 396 V 396
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 116/261 (44%), Gaps = 7/261 (2%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
+ ML +P I FN ++ ++ + A L G PD T T I C
Sbjct: 143 YTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCR 202
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
++ AF V ++ + + + T L+ GL +I A++ +K V
Sbjct: 203 RKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVR- 261
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLY 214
TY LI+ LC G+ A+ L +Q+ E D MY +I+S C + +A L
Sbjct: 262 ---TYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLL 318
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
ML + P+V TYN LI GFC + KA+G + M +N+ PD+ T + LI C
Sbjct: 319 EHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSS 377
Query: 275 RKVKQANSVVAAMIKASVEPN 295
+ A +++ M ++ + PN
Sbjct: 378 GNLDSAYRLLSLMEESGLVPN 398
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 173/379 (45%), Gaps = 21/379 (5%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
AP ++ +L + + AV L ++ +KG P++ + +L+ FC GR + A +
Sbjct: 208 APNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMA 267
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVS--VTYRF 163
+ ++ + ++ + + L++ LC +G A + ++ DR VTY
Sbjct: 268 LFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGG------DRAPSVVTYNI 321
Query: 164 LINELCEVGETGAALQLLRQIEEEHTDVQM----YNTIIKSMCEDKCVSDAYDLYNEMLL 219
LIN L G T ALQ+L+++ + + ++ YN +I +C++ V +EM+
Sbjct: 322 LINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIY 381
Query: 220 KRISPDVFTYNTLIYGFCA-GGQLRKAVGFFNVMKMENIKPDVSTCD---PLIHALCKER 275
+R P+ TYN I C ++++A F+ + + N K T D +I +LC++
Sbjct: 382 RRCKPNEGTYNA-IGSLCEHNSKVQEA--FYIIQSLSN-KQKCCTHDFYKSVITSLCRKG 437
Query: 276 KVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA-RFLSHTMATRGVTPDVHTY 334
A ++ M + +P+ Y+ LI G CL T A LS + P V +
Sbjct: 438 NTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNF 497
Query: 335 NIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCS 394
N MI LC D AM +F M K P+ TY+IL+EG + A +L E+
Sbjct: 498 NAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRL 557
Query: 395 NGIAYTSKLDAICNDYNFD 413
+ + +D I +N D
Sbjct: 558 RKVIGQNAVDRIVMQFNLD 576
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 171/417 (41%), Gaps = 37/417 (8%)
Query: 12 PSLFMRYHSHSPRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSL 71
P L S PR ++ S ++++ P + +L L + N A+ +
Sbjct: 69 PDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRV 128
Query: 72 SQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCL 131
+ + GI PD + T L+N C G + YA ++ K+ Y +T L++GLC+
Sbjct: 129 IELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCM 188
Query: 132 NGEIRSAINFHDDVKAKG-------FQFQVDRVS------------------------VT 160
G + ++ F + + KG + F ++ V+
Sbjct: 189 LGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVS 248
Query: 161 YRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEML 218
Y L+ C+ G T A+ L R++ + +V YN +++ +C D +A L EM
Sbjct: 249 YNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD 308
Query: 219 LKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN--IKPDVSTCDPLIHALCKERK 276
+P V TYN LI G+ +A+ M N + ++ +P+I LCKE K
Sbjct: 309 GGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGK 368
Query: 277 VKQANSVVAAMIKASVEPNVFIYNTLIDGYCLIN-QMTKARFLSHTMATRGVTPDVHTYN 335
V + MI +PN YN I C N ++ +A ++ +++ + Y
Sbjct: 369 VDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYK 427
Query: 336 IMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
+I+ LC A L + M PDA TYS LI G + A+ +L+ M
Sbjct: 428 SVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIM 484
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 109/243 (44%), Gaps = 6/243 (2%)
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+SD++ ++ P+V L+Y C +L+KA+ +M I PD S
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
L++ LCK V A +V M N YN L+ G C++ + ++ + +G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
+ P+ TY+ ++ DEA+ L + +K +P+ +Y++L+ G+ A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 387 NLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIVLRN 441
L E+ + G ++Y L +C D + +E + + G A ++ +I++ +
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRW-EEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 442 PSF 444
+F
Sbjct: 326 LAF 328
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 150/289 (51%), Gaps = 24/289 (8%)
Query: 147 AKGFQFQVDR-----VSVTYRFLINELCEVGETG---AALQLLRQIEEE--HTDVQMYNT 196
A+ F F ++R V + R+ + + G G +++L + +++ V +N+
Sbjct: 119 ARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNS 178
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKR---ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
++ + + A+DL++EM +R ++PD +T+NTLI GFC + +A F M+
Sbjct: 179 LLSILLKRGRTGMAHDLFDEM--RRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDME 236
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKAS--VEPNVFIYNTLIDGYCLINQ 311
+ + PDV T + +I LC+ KVK A++V++ M+K + V PNV Y TL+ GYC+ +
Sbjct: 237 LYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQE 296
Query: 312 MTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD--LKDIKPDAETY 369
+ +A + H M +RG+ P+ TYN +I L ++ DE + + PDA T+
Sbjct: 297 IDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTF 356
Query: 370 SILIEGWLNLPHYMHAINLLAEMCS-----NGIAYTSKLDAICNDYNFD 413
+ILI+ + H A+ + EM + + +Y+ + +C FD
Sbjct: 357 NILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFD 405
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 163/394 (41%), Gaps = 25/394 (6%)
Query: 17 RYHSHSPRPFSHEAV--NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQ 74
RY + R + + + +V F M M +P + FN++L L++ A L +
Sbjct: 139 RYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDE 198
Query: 75 LELK-GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNG 133
+ G+ PD T LIN FC ++ AF + + PD T++ GLC G
Sbjct: 199 MRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Query: 134 EIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDV 191
+++ A N + K + VS Y L+ C E A+ + + +
Sbjct: 259 KVKIAHNVLSGMLKKATDVHPNVVS--YTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNA 316
Query: 192 QMYNTIIKSMCEDKCVSDAYDLYNEMLL------KRISPDVFTYNTLIYGFCAGGQLRKA 245
YNT+IK + E + YD ++L+ +PD T+N LI C G L A
Sbjct: 317 VTYNTLIKGLSE----AHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAA 372
Query: 246 VGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASV-------EPNVFI 298
+ F M + PD ++ LI LC + +A ++ + + V +P
Sbjct: 373 MKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAA 432
Query: 299 YNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
YN + + C + +A + + RGV D +Y +I+ C A L M
Sbjct: 433 YNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLML 491
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
++ PD ETY +LI+G L + + A + L M
Sbjct: 492 RREFVPDLETYELLIDGLLKIGEALLAHDTLQRM 525
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 152/375 (40%), Gaps = 9/375 (2%)
Query: 28 HEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTA--VSLSQQLELKGIAPDIA 85
E AV FH+MLS P +N ++ L + Y + + APD
Sbjct: 295 QEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDAC 354
Query: 86 TLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDV 145
T ILI C G ++ A V ++L PD+ + + L++ LC+ E A +++
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 146 KAKGFQFQVDR---VSVTYRFLINELCEVGETGAALQLLRQIEEEHT-DVQMYNTIIKSM 201
K D ++ Y + LC G+T A ++ RQ+ + D Y T+I
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGH 474
Query: 202 CEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDV 261
C + AY+L ML + PD+ TY LI G G+ A M + P
Sbjct: 475 CREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVA 534
Query: 262 STCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHT 321
+T ++ L K + ++ +V M++ + N+ + ++ Q KA +
Sbjct: 535 TTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRL 594
Query: 322 MATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPH 381
+ G + ++ +LC + + +A +L + K D +T + +IEG
Sbjct: 595 LYDNGYLVKMEE---LLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKR 651
Query: 382 YMHAINLLAEMCSNG 396
+ A +L E+ G
Sbjct: 652 HSEAFSLYNELVELG 666
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 167/411 (40%), Gaps = 46/411 (11%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + N + VR N A+ +++++ GI P++ T +I +C L R+ A +
Sbjct: 275 PNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIEL 334
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
L + + PD + T+M LC I + D +K + + VTY LI+
Sbjct: 335 LEDMHSKGCLPDKVSYYTIMGYLCKEKRI---VEVRDLMKKMAKEHGLVPDQVTYNTLIH 391
Query: 167 ELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLK-RIS 223
L + AL L+ +E+ D Y+ I+ ++C++ +S+A DL NEML K
Sbjct: 392 MLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP 451
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALC----------- 272
PDV TY ++ GFC G++ KA VM KP+ + L++ +C
Sbjct: 452 PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 511
Query: 273 ------------------------KERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCL 308
+E K+ +A VV M+ P N L+ C
Sbjct: 512 MNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR 571
Query: 309 INQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAET 368
+ +AR +G +V + +I C ++ +D A+S+ M L + D T
Sbjct: 572 DGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFT 631
Query: 369 YSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFDD 414
Y+ L++ A L+ +M GI Y + + C DD
Sbjct: 632 YTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDD 682
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 159/334 (47%), Gaps = 17/334 (5%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKG-IAPDIATLTILINCFCHLGRMNYAFSVLGKI 110
++ I+ +L + A L ++ KG PD+ T T ++N FC LG ++ A +L +
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 111 LKRAYQPDTTALTTLMKGLCLNG---EIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINE 167
++P+T + T L+ G+C G E R +N + + S+TY +++
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSE-------EHWWSPNSITYSVIMHG 533
Query: 168 LCEVGETGAALQLLRQIEEEH---TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
L G+ A ++R++ + V++ N +++S+C D +A E L K +
Sbjct: 534 LRREGKLSEACDVVREMVLKGFFPGPVEI-NLLLQSLCRDGRTHEARKFMEECLNKGCAI 592
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
+V + T+I+GFC +L A+ + M + N DV T L+ L K+ ++ +A ++
Sbjct: 593 NVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELM 652
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
M+ ++P Y T+I YC + ++ + M +R + YN +I LC
Sbjct: 653 KKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVL 710
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLN 378
++EA +L + + DA+T L+EG+L
Sbjct: 711 GKLEEADTLLGKVLRTASRSDAKTCYALMEGYLK 744
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 141/315 (44%), Gaps = 9/315 (2%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P +N ++ L + +H A+ + + KG D + +++ C GRM+ A +
Sbjct: 381 PDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDL 440
Query: 107 LGKILKRAY-QPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+ ++L + + PD T ++ G C GE+ A + G + +V+Y L+
Sbjct: 441 INEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPN----TVSYTALL 496
Query: 166 NELCEVGETGAALQLLRQIEEEH---TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRI 222
N +C G++ A +++ + EEH + Y+ I+ + + +S+A D+ EM+LK
Sbjct: 497 NGMCRTGKSLEAREMM-NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGF 555
Query: 223 SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS 282
P N L+ C G+ +A F + +V +IH C+ ++ A S
Sbjct: 556 FPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALS 615
Query: 283 VVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC 342
V+ M + +VF Y TL+D ++ +A L M +G+ P TY +I C
Sbjct: 616 VLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYC 675
Query: 343 TSNMMDEAMSLFHYM 357
+D+ +++ M
Sbjct: 676 QMGKVDDLVAILEKM 690
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 151/372 (40%), Gaps = 8/372 (2%)
Query: 28 HEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELK-GIAPDIAT 86
H A+ +M S P + I+G L + L +++ + G+ PD T
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
LI+ + A L ++ ++ D + ++ LC G + A + +++
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT---DVQMYNTIIKSMCE 203
+KG VTY ++N C +GE A +LL Q+ H + Y ++ MC
Sbjct: 446 SKG---HCPPDVVTYTAVVNGFCRLGEVDKAKKLL-QVMHTHGHKPNTVSYTALLNGMCR 501
Query: 204 DKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVST 263
+A ++ N SP+ TY+ +++G G+L +A M ++ P
Sbjct: 502 TGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVE 561
Query: 264 CDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMA 323
+ L+ +LC++ + +A + + NV + T+I G+C +++ A + M
Sbjct: 562 INLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY 621
Query: 324 TRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYM 383
DV TY ++ L + EA L M K I P TY +I + +
Sbjct: 622 LINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVD 681
Query: 384 HAINLLAEMCSN 395
+ +L +M S
Sbjct: 682 DLVAILEKMISR 693
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 140/310 (45%), Gaps = 8/310 (2%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + +L + R A + E +P+ T +++++ G+++ A V
Sbjct: 487 PNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV 546
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
+ +++ + + P + L++ LC +G A F ++ KG V V + +I+
Sbjct: 547 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINV----VNFTTVIH 602
Query: 167 ELCEVGETGAALQLLRQIE--EEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
C+ E AAL +L + +H DV Y T++ ++ + +++A +L +ML K I P
Sbjct: 603 GFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDP 662
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
TY T+I+ +C G++ V KM + + + + +I LC K+++A++++
Sbjct: 663 TPVTYRTVIHRYCQMGKVDDLVAILE--KMISRQKCRTIYNQVIEKLCVLGKLEEADTLL 720
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
+++ + + L++GY A ++ M R + PDV + L
Sbjct: 721 GKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLK 780
Query: 345 NMMDEAMSLF 354
+DEA L
Sbjct: 781 GKVDEADKLM 790
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 223 SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS 282
+P+ F+ ++ + GQLR A+ +M+ ++P++ C+ I + ++++A
Sbjct: 241 TPEAFS--RVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALR 298
Query: 283 VVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC 342
+ M + PNV YN +I GYC ++++ +A L M ++G PD +Y ++ +LC
Sbjct: 299 FLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLC 358
Query: 343 TSNMMDEAMSLFHYMDLK-DIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG----- 396
+ E L M + + PD TY+ LI H A+ L + G
Sbjct: 359 KEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDK 418
Query: 397 IAYTSKLDAICND 409
+ Y++ + A+C +
Sbjct: 419 LGYSAIVHALCKE 431
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 133/328 (40%), Gaps = 20/328 (6%)
Query: 16 MRYHSHSPRPFSHEAV-NAVSSFHNMLSMRP----------APPITQFNNILGSLVRMNH 64
M H H P S+ A+ N + L R +P ++ I+ L R
Sbjct: 480 MHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGK 539
Query: 65 YPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTT 124
A + +++ LKG P + +L+ C GR + A + + L + + TT
Sbjct: 540 LSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTT 599
Query: 125 LMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQI 184
++ G C N E+ +A++ DD+ V TY L++ L + G A +L++++
Sbjct: 600 VIHGFCQNDELDAALSVLDDMYLINKHADV----FTYTTLVDTLGKKGRIAEATELMKKM 655
Query: 185 EEEHTDVQ--MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQL 242
+ D Y T+I C+ V D + +M+ ++ + YN +I C G+L
Sbjct: 656 LHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKL 713
Query: 243 RKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTL 302
+A + + D TC L+ K+ A V M ++ P+V + L
Sbjct: 714 EEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKL 773
Query: 303 IDGYCLINQMTKARFLSHTMATRG-VTP 329
L ++ +A L + RG ++P
Sbjct: 774 SKRLVLKGKVDEADKLMLRLVERGHISP 801
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 141/298 (47%), Gaps = 7/298 (2%)
Query: 103 AFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK-GFQFQVDRVSVTY 161
A V +++ PD + ++ C +G + A+ F + ++ G + V VTY
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNV----VTY 264
Query: 162 RFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLL 219
LIN +G+ ++LR + E +V Y ++IK C+ + +A ++ +
Sbjct: 265 NSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKE 324
Query: 220 KRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQ 279
K++ D Y L+ G+C GQ+R AV + M ++ + + C+ LI+ CK ++ +
Sbjct: 325 KKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVE 384
Query: 280 ANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMIS 339
A + + M S++P+ YNTL+DGYC + +A L M + V P V TYNI++
Sbjct: 385 AEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLK 444
Query: 340 WLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
+ +SL+ M + + D + S L+E L + A+ L + + G+
Sbjct: 445 GYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGL 502
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 155/367 (42%), Gaps = 11/367 (2%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
+ +N+++ + + + + +G++ ++ T T LI +C G M A V
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
+ ++ D LM G C G+IR A+ HD++ + V + LIN
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNM----IEIGVRTNTTICNSLINGY 376
Query: 169 CEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
C+ G+ A Q+ ++ + D YNT++ C V +A L ++M K + P V
Sbjct: 377 CKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTV 436
Query: 227 FTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAA 286
TYN L+ G+ G + + +M + D +C L+ AL K +A +
Sbjct: 437 MTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWEN 496
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNM 346
++ + + N +I G C + ++ +A+ + + P V TY +
Sbjct: 497 VLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGN 556
Query: 347 MDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTS 401
+ EA ++ YM+ K I P E Y+ LI G H +L+ E+ + G+ Y +
Sbjct: 557 LKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGA 616
Query: 402 KLDAICN 408
+ CN
Sbjct: 617 LITGWCN 623
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 118/518 (22%), Positives = 207/518 (39%), Gaps = 96/518 (18%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S + V A F M P +N ++ R + A+ L Q+ K + P + T
Sbjct: 379 SGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMT 438
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
IL+ + +G + S+ +LKR D + +TL++ L G+ A+ ++V
Sbjct: 439 YNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVL 498
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIE--------------------- 185
A+G ++T +I+ LC++ + A ++L +
Sbjct: 499 ARGLLTD----TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKV 554
Query: 186 ---------EEHTD-------VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
+E+ + ++MYNT+I + + ++ DL E+ + ++P V TY
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATY 614
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV------------ 277
LI G+C G + KA M + I +V+ C + ++L + K+
Sbjct: 615 GALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD 674
Query: 278 --------------------------KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQ 311
K A SV + K + PN +YN I G C +
Sbjct: 675 FDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGK 734
Query: 312 MTKARFL-SHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
+ AR L S +++ PD +TY I+I + +++A +L M LK I P+ TY+
Sbjct: 735 LEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYN 794
Query: 371 ILIEGWLNLPHYMHAINLLAEM-----CSNGIAYTSKLDAICNDYNFDDE-------IEK 418
LI+G L + A LL ++ N I Y + +D + N + IEK
Sbjct: 795 ALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEK 854
Query: 419 -FMRYKETGGDADFLIASHIVLRNPSFKATGFGTYSLD 455
+R + GD D I +VL +P K G ++
Sbjct: 855 GLVRGSDKQGDVD--IPKEVVL-DPEVKLGSTGVIEMN 889
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 166/368 (45%), Gaps = 7/368 (1%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELK-GIAPDIATLTILI 91
A+ + M+S +P + + ++ + R + A+ +++ E G+ ++ T LI
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N + +G + VL + +R + T+L+KG C G + A + + +K K +
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEK--K 326
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE--EHTDVQMYNTIIKSMCEDKCVSD 209
D+ Y L++ C G+ A+++ + E T+ + N++I C+ + +
Sbjct: 327 LVADQH--MYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVE 384
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A +++ M + PD TYNTL+ G+C G + +A+ + M + + P V T + L+
Sbjct: 385 AEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLK 444
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
+ S+ M+K V + +TL++ + +A L + RG+
Sbjct: 445 GYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLT 504
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLL 389
D T N+MIS LC ++EA + +++ KP +TY L G+ + + A +
Sbjct: 505 DTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVK 564
Query: 390 AEMCSNGI 397
M GI
Sbjct: 565 EYMERKGI 572
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 39/158 (24%)
Query: 287 MIKASVEPNVF------------------------------------IYNTLIDGYCLIN 310
MI V P+VF YN+LI+GY +I
Sbjct: 216 MISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIG 275
Query: 311 QMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
+ + M+ RGV+ +V TY +I C +M+EA +F + K + D Y
Sbjct: 276 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 335
Query: 371 ILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKLDAICN 408
+L++G+ A+ + M G+ + ICN
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNT---TICN 370
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 153/356 (42%), Gaps = 21/356 (5%)
Query: 1 MSLFRSRFLSIPSLFMRYHSHSPRPFSHEAV--------------NAVSSFHNMLSMRPA 46
+ L R R+ ++ + H S P + E +S+F+ ML
Sbjct: 92 LKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFT 151
Query: 47 PPITQFNNILGSLVRMNHY-PTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P N IL LV Y A L + L G+ P+ + +L+ FC ++ A+
Sbjct: 152 PQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQ 211
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+ GK+L+R PD + L++G C G++ A+ DD+ KGF DR+S Y L+
Sbjct: 212 LFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFV--PDRLS--YTTLL 267
Query: 166 NELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
N LC + A +LL +++ + + D+ YNT+I C + DA + ++ML S
Sbjct: 268 NSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCS 327
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
P+ +Y TLI G C G + + M + P S + L+ C KV++A V
Sbjct: 328 PNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDV 387
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMIS 339
V ++K + + +I C ++ K + +T D ++ I
Sbjct: 388 VEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGIG 443
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 122/254 (48%), Gaps = 9/254 (3%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
+ + YN ++++ C + +S AY L+ +ML + + PDV +Y LI GFC GQ+ A+
Sbjct: 189 NTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
+ M + PD + L+++LC++ ++++A ++ M P++ YNT+I G+C
Sbjct: 249 DDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRE 308
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
++ AR + M + G +P+ +Y +I LC M DE M K P
Sbjct: 309 DRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVS 368
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGIAYTSK-----LDAICNDYNFDDEIEKFMRYKE 424
+ L++G+ + A +++ + NG S + ICN +DE EK + E
Sbjct: 369 NCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN----EDESEKIKLFLE 424
Query: 425 TGGDADFLIASHIV 438
+ + IV
Sbjct: 425 DAVKEEITGDTRIV 438
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 6/229 (2%)
Query: 192 QMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA-GGQLRKAVGFFN 250
+++ +IK E K + +ML +P N ++ + G L+KA F
Sbjct: 120 EIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFK 179
Query: 251 VMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLIN 310
++ + P+ + + L+ A C + A + M++ V P+V Y LI G+C
Sbjct: 180 SSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG 239
Query: 311 QMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
Q+ A L M +G PD +Y +++ LC + EA L M LK PD Y+
Sbjct: 240 QVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYN 299
Query: 371 ILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDD 414
+I G+ M A +L +M SNG ++Y + + +C+ FD+
Sbjct: 300 TMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%)
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+ A++L+ L + P+ +YN L+ FC L A F M ++ PDV +
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
LI C++ +V A ++ M+ P+ Y TL++ C Q+ +A L M +G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
PD+ YN MI C + +A + M P++ +Y LI G + +
Sbjct: 291 CNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGK 350
Query: 387 NLLAEMCSNGIA 398
L EM S G +
Sbjct: 351 KYLEEMISKGFS 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 312 MTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSI 371
+ KA L + GV P+ +YN+++ C ++ + A LF M +D+ PD ++Y I
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 372 LIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYKETG 426
LI+G+ A+ LL +M + G ++YT+ L+++C + + R K G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 427 GDADFLIASHIVL 439
+ D + + ++L
Sbjct: 291 CNPDLVHYNTMIL 303
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 172/403 (42%), Gaps = 45/403 (11%)
Query: 24 RPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPD 83
R HEA F + P + + +L ++ Y + S+ ++E G D
Sbjct: 58 RGRPHEAQTV---FKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLD 114
Query: 84 IATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHD 143
+IN F G M A L K+ + P T+ TL+KG + G+ + D
Sbjct: 115 SIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 144 DVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCE 203
+ +G VD VG +++ +N ++++ C+
Sbjct: 175 LMLEEG---NVD---------------VG----------------PNIRTFNVLVQAWCK 200
Query: 204 DKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKA---VGFFNVMKMENIKPD 260
K V +A+++ +M + PD TYNT+ + G+ +A V VMK E KP+
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMK-EKAKPN 259
Query: 261 VSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSH 320
TC ++ C+E +V+ V M + VE N+ ++N+LI+G+ + +
Sbjct: 260 GRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLT 319
Query: 321 TMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLP 380
M V DV TY+ +++ ++ M++A +F M +KPDA YSIL +G++
Sbjct: 320 LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAK 379
Query: 381 HYMHAINLL----AEMCSNGIAYTSKLDAICNDYNFDDEIEKF 419
A LL E N + +T+ + C++ + DD + F
Sbjct: 380 EPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVF 422
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 139/322 (43%), Gaps = 9/322 (2%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P I FN ++ + + A + +++E G+ PD T + C+ G A S
Sbjct: 185 GPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAES 244
Query: 106 --VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRF 163
V ++K +P+ ++ G C G +R + F +K + +V+ V +
Sbjct: 245 EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMK----EMRVEANLVVFNS 300
Query: 164 LINELCEVGETGAALQLLRQIEE--EHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKR 221
LIN EV + ++L ++E DV Y+T++ + + A ++ EM+
Sbjct: 301 LINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAG 360
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
+ PD Y+ L G+ + +KA + +E+ +P+V +I C + A
Sbjct: 361 VKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAM 419
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
V M K V PN+ + TL+ GY + Q KA + M GV P+ T+ ++
Sbjct: 420 RVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAW 479
Query: 342 CTSNMMDEAMSLFHYMDLKDIK 363
+ + DE+ + + KDI+
Sbjct: 480 RVAGLTDESNKAINALKCKDIE 501
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 131/299 (43%), Gaps = 5/299 (1%)
Query: 80 IAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAI 139
+ P+I T +L+ +C ++ A+ V+ K+ + +PDT T+ GE A
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 140 NFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQM--YNTI 197
+ + V+ + + T ++ C G L+ +R+++E + + +N++
Sbjct: 244 S--EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSL 301
Query: 198 IKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENI 257
I E ++ M + DV TY+T++ + + G + KA F M +
Sbjct: 302 INGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGV 361
Query: 258 KPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARF 317
KPD L + ++ K+A ++ +I S PNV I+ T+I G+C M A
Sbjct: 362 KPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMR 420
Query: 318 LSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
+ + M GV+P++ T+ ++ +A + M +KP+ T+ +L E W
Sbjct: 421 VFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAW 479
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 154/343 (44%), Gaps = 7/343 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+N ++ ++ + A L ++ + + I T TILI + G + A ++
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
PD A + ++ L A +F D +K + F+ D + Y L+ C
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR---FEPD--VIVYTNLVRGWCRA 268
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
GE A ++ ++++ +V Y+ +I ++C +S A+D++ +ML +P+ T+
Sbjct: 269 GEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
N L+ G+ K + +N MK +PD T + LI A C++ ++ A V+ MIK
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
E N +NT+ + A + M P+ TYNI++ S D
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDM 448
Query: 350 AMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
+ + MD K+++P+ TY +L+ + + H+ +A L EM
Sbjct: 449 VLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEM 491
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 132/279 (47%), Gaps = 15/279 (5%)
Query: 131 LNGEIRS---AINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE 187
L+G++R A + D +K++ + ++ T+ LI G A+ ++E+
Sbjct: 160 LSGKVRQFDLAWHLIDLMKSRNVEISIE----TFTILIRRYVRAGLASEAVHCFNRMEDY 215
Query: 188 H--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKA 245
D ++ +I ++ + S+A ++ L R PDV Y L+ G+C G++ +A
Sbjct: 216 GCVPDKIAFSIVISNLSRKRRASEAQSFFDS-LKDRFEPDVIVYTNLVRGWCRAGEISEA 274
Query: 246 VGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDG 305
F MK+ I+P+V T +I ALC+ ++ +A+ V A M+ + PN +N L+
Sbjct: 275 EKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRV 334
Query: 306 YCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPD 365
+ + K + + M G PD TYN +I C ++ A+ + + M K + +
Sbjct: 335 HVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVN 394
Query: 366 AETYSIL---IEGW--LNLPHYMHAINLLAEMCSNGIAY 399
A T++ + IE +N H M++ + A+ N + Y
Sbjct: 395 ASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTY 433
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 116/294 (39%), Gaps = 40/294 (13%)
Query: 36 SFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFC 95
SF + L R P + + N++ R A + ++++L GI P++ T +I+I+ C
Sbjct: 242 SFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALC 301
Query: 96 HLGRMNYAFSVLGKIL-----------------------------------KRAYQPDTT 120
G+++ A V +L K +PDT
Sbjct: 302 RCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTI 361
Query: 121 ALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQL 180
L++ C + + +A+ + + K + + +R+ I + +V GA
Sbjct: 362 TYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRY-IEKKRDVN--GAHRMY 418
Query: 181 LRQIEEE-HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAG 239
+ +E + + YN +++ K + EM K + P+V TY L+ FC
Sbjct: 419 SKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGM 478
Query: 240 GQLRKAVGFFNVMKMEN-IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASV 292
G A F M E + P +S + ++ L + ++K+ +V MI+ +
Sbjct: 479 GHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 157/366 (42%), Gaps = 11/366 (3%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + +N ++ LV +A + + +E I PDI T +I +C G+ A
Sbjct: 220 PTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEK 279
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
L + R ++ D T+++ + + S + + ++ KG Q + +I
Sbjct: 280 LRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPH----AFSLVIG 335
Query: 167 ELCEVGETGAALQLLRQI--EEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
LC+ G+ + + + +V +Y +I + V DA L + M+ + P
Sbjct: 336 GLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 395
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
DV TY+ ++ G C G++ +A+ +F+ + + + + LI L K +V +A +
Sbjct: 396 DVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLF 455
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTM-ATRGVTPDVHTYNIMISWLCT 343
M + + + YN LID + ++ +A L M G V+TY I++S +
Sbjct: 456 EEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFK 515
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKL 403
+ +EA+ L+ M K I P A + L G A +L E+ G+ L
Sbjct: 516 EHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI----L 571
Query: 404 DAICND 409
DA C D
Sbjct: 572 DAACED 577
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 189/463 (40%), Gaps = 55/463 (11%)
Query: 25 PFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDI 84
PF ++ + V S N+L P+P ++Q N+L M ++ +K ++P+
Sbjct: 66 PF-NDVSDLVKSNRNLL---PSPWVSQILNLLDGSASMES--NLDGFCRKFLIK-LSPNF 118
Query: 85 ATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDD 144
+ + + + ++F + K+ Y + +L+ L L ++ +
Sbjct: 119 VSFVLKSDEIREKPDIAWSFFCWSRKQKK-YTHNLECYVSLVDVLALAKDVDRIRFVSSE 177
Query: 145 VKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMY--NTIIKSMC 202
+K F V + LI ++G L + R+++E + +Y N ++ +
Sbjct: 178 IKKFEFPMTVSAANA----LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLV 233
Query: 203 EDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKA----------------- 245
V A ++ M RI PD+ TYNT+I G+C GQ +KA
Sbjct: 234 SAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKI 293
Query: 246 ------------------VGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
V + M + I+ +I LCKE K+ + +V M
Sbjct: 294 TYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENM 353
Query: 288 IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMM 347
I+ +PNV IY LIDGY + A L H M G PDV TY+++++ LC + +
Sbjct: 354 IRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRV 413
Query: 348 DEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSK 402
+EA+ FH + ++ YS LI+G A L EM G Y +
Sbjct: 414 EEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 473
Query: 403 LDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIVLRNPSFK 445
+DA D+ I F R +E G D + ++ +L + FK
Sbjct: 474 IDAFTKHRKVDEAIALFKRMEEEEG-CDQTVYTYTILLSGMFK 515
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 137/311 (44%), Gaps = 8/311 (2%)
Query: 48 PITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVL 107
P F+ ++G L + ++ + + KG P++A T+LI+ + G + A +L
Sbjct: 326 PPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLL 385
Query: 108 GKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINE 167
+++ ++PD + ++ GLC NG + A+++ + G S+ Y LI+
Sbjct: 386 HRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN----SMFYSSLIDG 441
Query: 168 LCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKR-ISP 224
L + G A +L ++ E+ D YN +I + + + V +A L+ M +
Sbjct: 442 LGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQ 501
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
V+TY L+ G + +A+ +++M + I P + L LC KV +A ++
Sbjct: 502 TVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKIL 561
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
+ V + + +I+ C ++ +A L+ + RG +MI+ L
Sbjct: 562 DELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKV 620
Query: 345 NMMDEAMSLFH 355
D AM L H
Sbjct: 621 GKADLAMKLMH 631
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 123/288 (42%), Gaps = 8/288 (2%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F NM+ P + + ++ + A+ L ++ +G PD+ T ++++N C
Sbjct: 350 FENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK 409
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
GR+ A ++ ++L+ GL G + A +++ KG R
Sbjct: 410 NGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKG----CTR 465
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEEH---TDVQMYNTIIKSMCEDKCVSDAYDL 213
S Y LI+ + + A+ L +++EEE V Y ++ M ++ +A L
Sbjct: 466 DSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKL 525
Query: 214 YNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCK 273
++ M+ K I+P + L G C G++ +A + + + D + C+ +I+ LCK
Sbjct: 526 WDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD-AACEDMINTLCK 584
Query: 274 ERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHT 321
++K+A + + + E I +I+ + + A L H+
Sbjct: 585 AGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHS 632
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 175/415 (42%), Gaps = 54/415 (13%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P ++ ++ S ++ +A+ L +++ + P T L+ + +G++ A +
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
++ + P T L+KGL G + A F+ D+ G V FL N
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDV-------VFLNN 343
Query: 167 ELCEVGETGAALQLLRQIEEEHT-----DVQMYNTIIKSMCEDKC-VSDAYDLYNEMLLK 220
+ +G+ G +L E V YNT+IK++ E K VS+ +++M
Sbjct: 344 LMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKAD 403
Query: 221 RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQA 280
+SP FTY+ LI G+C ++ KA+ M + P + LI+AL K ++ + A
Sbjct: 404 SVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAA 463
Query: 281 NS---------------VVAAMIK--------------------ASVEPNVFIYNTLIDG 305
N V A MIK P+V+ YN L+ G
Sbjct: 464 NELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSG 523
Query: 306 YCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPD 365
+ +A L M G D++++NI+++ + + A+ +F + IKPD
Sbjct: 524 MVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPD 583
Query: 366 AETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICN-DYNFDD 414
TY+ L+ + + + A ++ EM G I Y+S LDA+ N D+ DD
Sbjct: 584 GVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDD 638
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 159/373 (42%), Gaps = 36/373 (9%)
Query: 43 MRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNY 102
M+P I + +LG ++ A+ L ++++ G +P + T T LI GR++
Sbjct: 264 MQPTEKI--YTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDE 321
Query: 103 AFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDV----------------- 145
A+ +L+ PD L LM L G + N ++
Sbjct: 322 AYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIK 381
Query: 146 ---KAKGF---------QFQVDRVS---VTYRFLINELCEVGETGAALQLLRQIEEEHTD 190
++K + + D VS TY LI+ C+ AL LL +++E+
Sbjct: 382 ALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFP 441
Query: 191 V--QMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGF 248
Y ++I ++ + K A +L+ E+ + Y +I F G+L +AV
Sbjct: 442 PCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDL 501
Query: 249 FNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCL 308
FN MK + PDV + L+ + K + +ANS++ M + ++ +N +++G+
Sbjct: 502 FNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFAR 561
Query: 309 INQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAET 368
+A + T+ G+ PD TYN ++ + M +EA + M K + DA T
Sbjct: 562 TGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAIT 621
Query: 369 YSILIEGWLNLPH 381
YS +++ N+ H
Sbjct: 622 YSSILDAVGNVDH 634
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 147/325 (45%), Gaps = 6/325 (1%)
Query: 85 ATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDD 144
A L+ L+ ++ A SV + R +P ++ +++ L G+ + +
Sbjct: 163 AVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTE 222
Query: 145 VKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMC 202
+ +G F ++TY LI+ ++G +A++L ++++ ++Y T++
Sbjct: 223 MCNEGDCFPD---TITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYF 279
Query: 203 EDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVS 262
+ V A DL+ EM SP V+TY LI G G++ +A GF+ M + + PDV
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVV 339
Query: 263 TCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDG-YCLINQMTKARFLSHT 321
+ L++ L K +V++ +V + M P V YNT+I + +++
Sbjct: 340 FLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDK 399
Query: 322 MATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPH 381
M V+P TY+I+I C +N +++A+ L MD K P Y LI
Sbjct: 400 MKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 459
Query: 382 YMHAINLLAEMCSNGIAYTSKLDAI 406
Y A L E+ N +S++ A+
Sbjct: 460 YEAANELFKELKENFGNVSSRVYAV 484
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 180/437 (41%), Gaps = 55/437 (12%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGR-MNYAFSVL 107
+ + +++ + Y AV++ +++E G P + T +++N F +G N S++
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 108 GKILKRAYQPDTTALTTLMKGLCLNGEI-RSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
K+ PD TL+ C G + + A +++KA GF + VTY L++
Sbjct: 268 EKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYD----KVTYNALLD 322
Query: 167 ELCEVGETGAALQLLRQ--IEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
+ A+++L + + + YN++I + D + +A +L N+M K P
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKP------------------------- 259
DVFTY TL+ GF G++ A+ F M+ KP
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 260 ----------DVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
D+ T + L+ + + + V M +A P +NTLI Y
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
+A + M GVTPD+ TYN +++ L M +++ + M+ KP+ TY
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Query: 370 SILIEGWLNLPH--YMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIEK-FMR 421
L+ + N MH+ LAE +G+ L +C+ + E E+ F
Sbjct: 563 CSLLHAYANGKEIGLMHS---LAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 422 YKETGGDADFLIASHIV 438
KE G D + +V
Sbjct: 620 LKERGFSPDITTLNSMV 636
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 152/341 (44%), Gaps = 16/341 (4%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
+P I +N +L + + ++++ G P+ T LI+ + G A +
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
V ++L PD + T++ L G + + V A+ + +TY L+
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS----EKVLAEMEDGRCKPNELTYCSLL 566
Query: 166 NELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSM---CEDKC--VSDAYDLYNEML 218
+ E G L+ + EE ++ ++K++ C KC + +A ++E+
Sbjct: 567 HAYANGKEIG----LMHSLAEEVYSGVIEPRAVLLKTLVLVC-SKCDLLPEAERAFSELK 621
Query: 219 LKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVK 278
+ SPD+ T N+++ + + KA G + MK P ++T + L++ +
Sbjct: 622 ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681
Query: 279 QANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMI 338
++ ++ ++ ++P++ YNT+I YC +M A + M G+ PDV TYN I
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Query: 339 SWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNL 379
+M +EA+ + YM +P+ TY+ +++G+ L
Sbjct: 742 GSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKL 782
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 142/329 (43%), Gaps = 21/329 (6%)
Query: 112 KRAYQP--DTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELC 169
++ YQ D + + ++ L G + SA N + ++ GF V +Y LI+
Sbjct: 164 QKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDV----YSYTSLISAFA 219
Query: 170 EVGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCE-----DKCVSDAYDLYNEMLLKRI 222
G A+ + +++EE+ + YN I+ + +K S L +M I
Sbjct: 220 NSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITS----LVEKMKSDGI 275
Query: 223 SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS 282
+PD +TYNTLI G ++A F MK D T + L+ K + K+A
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 283 VVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC 342
V+ M+ P++ YN+LI Y + +A L + MA +G PDV TY ++S
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Query: 343 TSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM----CSNGIA 398
+ ++ AMS+F M KP+ T++ I+ + N + + + E+ S I
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIV 455
Query: 399 YTSKLDAICNDYNFDDEIEKFMRYKETGG 427
+ L A+ D E+ + + G
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/467 (19%), Positives = 178/467 (38%), Gaps = 74/467 (15%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
SH A+ + M+ +P I +N+++ + R A+ L Q+ KG PD+ T
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
T L++ F G++ A S+ ++ +P+ +K G+ + D++
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 147 A-------------------KGFQFQVDRV------------SVTYRFLINELCEVGETG 175
G +V V T+ LI+ G
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 176 AALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLI 233
A+ + R++ + D+ YNT++ ++ + + EM R P+ TY +L+
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 234 YGFCAGGQ-----------------------------------LRKAVGFFNVMKMENIK 258
+ + G + L +A F+ +K
Sbjct: 567 HAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFS 626
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFL 318
PD++T + ++ + + V +AN V+ M + P++ YN+L+ + K+ +
Sbjct: 627 PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI 686
Query: 319 SHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLN 378
+ +G+ PD+ +YN +I C + M +A +F M I PD TY+ I +
Sbjct: 687 LREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAA 746
Query: 379 LPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKFM 420
+ AI ++ M +G Y S +D C N DE + F+
Sbjct: 747 DSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK-LNRKDEAKLFV 792
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 146/332 (43%), Gaps = 8/332 (2%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F M P FN ++ + R + A+++ +++ G+ PD++T ++
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
G + VL ++ +P+ +L+ EI + ++V + ++
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV----YSGVIEP 592
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLY 214
+V + L+ + A + +++E D+ N+++ + V+ A +
Sbjct: 593 RAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVL 652
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
+ M + +P + TYN+L+Y K+ + + IKPD+ + + +I+A C+
Sbjct: 653 DYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRN 712
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY 334
+++ A+ + + M + + P+V YNT I Y + +A + M G P+ +TY
Sbjct: 713 TRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTY 772
Query: 335 NIMISWLCTSNMMDEAMSLFHYMDLKDIKPDA 366
N ++ C N DEA LF DL+++ P A
Sbjct: 773 NSIVDGYCKLNRKDEA-KLF-VEDLRNLDPHA 802
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 156/344 (45%), Gaps = 13/344 (3%)
Query: 80 IAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAI 139
I P++ +L+ F + A VL ++ K +PD L+ LC NG ++ A
Sbjct: 165 IEPEL--FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEAS 222
Query: 140 NFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTI 197
+D++ K F + T L+ C G+ A ++L Q++E D+ ++ +
Sbjct: 223 KVFEDMREK---FPPNLRYFTS--LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNL 277
Query: 198 IKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFC-AGGQLRKAVGFFNVMKMEN 256
+ ++DAYDL N+M + P+V Y LI C ++ +A+ F M+
Sbjct: 278 LSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYG 337
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKAR 316
+ D+ T LI CK + + SV+ M K V P+ Y ++ + Q +
Sbjct: 338 CEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECL 397
Query: 317 FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
L M RG PD+ YN++I C + EA+ L++ M+ + P +T+ I+I G+
Sbjct: 398 ELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGF 457
Query: 377 LNLPHYMHAINLLAEMCSNGIAYTSK---LDAICNDYNFDDEIE 417
+ + A N EM S GI + L ++ N+ DD++E
Sbjct: 458 TSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE 501
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 136/283 (48%), Gaps = 8/283 (2%)
Query: 164 LINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
+++++ + G ++ +R+ E + +++ +++ V A ++ +EM +
Sbjct: 140 ILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLE 199
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
PD + + L+ C G +++A F M+ E P++ L++ C+E K+ +A V
Sbjct: 200 PDEYVFGCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTSLLYGWCREGKLMEAKEV 258
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC- 342
+ M +A +EP++ ++ L+ GY +M A L + M RG P+V+ Y ++I LC
Sbjct: 259 LVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCR 318
Query: 343 TSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----I 397
T MDEAM +F M+ + D TY+ LI G+ ++L +M G +
Sbjct: 319 TEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQV 378
Query: 398 AYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIVLR 440
Y + A F++ +E + K G D LI ++V+R
Sbjct: 379 TYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLI-YNVVIR 420
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 135/298 (45%), Gaps = 8/298 (2%)
Query: 63 NHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTAL 122
N AV + ++ G+ PD L++ C G + A V + ++ + P+
Sbjct: 181 NMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVF-EDMREKFPPNLRYF 239
Query: 123 TTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLR 182
T+L+ G C G++ A +K G + + V + L++ G+ A L+
Sbjct: 240 TSLLYGWCREGKLMEAKEVLVQMKEAGLEPDI----VVFTNLLSGYAHAGKMADAYDLMN 295
Query: 183 QIEEE--HTDVQMYNTIIKSMCE-DKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAG 239
+ + +V Y +I+++C +K + +A ++ EM D+ TY LI GFC
Sbjct: 296 DMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKW 355
Query: 240 GQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIY 299
G + K + M+ + + P T ++ A K+ + ++ ++ M + P++ IY
Sbjct: 356 GMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIY 415
Query: 300 NTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYM 357
N +I C + ++ +A L + M G++P V T+ IMI+ + + EA + F M
Sbjct: 416 NVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEM 473
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 152/351 (43%), Gaps = 12/351 (3%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
A F +M P P + F ++L R A + Q++ G+ PDI T L+
Sbjct: 220 EASKVFEDMREKFP-PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLL 278
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLC-LNGEIRSAINFHDDVKAKGF 150
+ + H G+M A+ ++ + KR ++P+ T L++ LC + A+ +++ G
Sbjct: 279 SGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGC 338
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVS 208
+ + VTY LI+ C+ G +L + ++ Y I+ + + +
Sbjct: 339 EADI----VTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFE 394
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
+ +L +M + PD+ YN +I C G++++AV +N M+ + P V T +I
Sbjct: 395 ECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMI 454
Query: 269 HALCKERKVKQANSVVAAMIKASV--EPNVFIYNTLIDGYCLINQMTKARFLSHTMA--T 324
+ + + +A + M+ + P +L++ +++ A+ + ++ T
Sbjct: 455 NGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKT 514
Query: 325 RGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
+V + I I L + EA S M D+ P TY+ L++G
Sbjct: 515 SSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKG 565
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 195/450 (43%), Gaps = 65/450 (14%)
Query: 7 RFLSIPSLFMRYHSHSPRP--FSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNH 64
R +P L MR+ + + FSH V ++ MLS I G ++
Sbjct: 164 RCFKVPHLAMRFFNWVKQKDGFSHR----VGIYNTMLS------------IAGEARNLDM 207
Query: 65 YPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTT 124
VS ++E G DI T TILI+ + ++ V K+ K ++ D TA
Sbjct: 208 VDELVS---EMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNI 264
Query: 125 LMKGLCLNGEIRSAINFHDDVKAKGFQF-------------QVDRVSV------------ 159
+++ LC+ G A+ F+ ++ KG F + ++V V
Sbjct: 265 MIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRIC 324
Query: 160 ------TYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAY 211
+ +L+ C G+ AL+L+R+++ + D + + ++K +C + DA
Sbjct: 325 EISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDAL 384
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
++ + ++ +R D Y +I G+ + KA+ F V+K P VST ++ L
Sbjct: 385 EIVD-IMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHL 443
Query: 272 CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV 331
K ++ ++ ++ MI+ +EP+ ++ G+ N++ +A + +M +G+ P
Sbjct: 444 FKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTW 503
Query: 332 HTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIE-----GWLNLPHYMHAI 386
+Y+I + LC S+ DE + +F+ M I + +S +I G H + I
Sbjct: 504 KSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIKEI 563
Query: 387 NLLA-----EMCSNGIAYTSKLDAICNDYN 411
+ E+ +G A S+ + + +DYN
Sbjct: 564 QKRSNSYCDELNGSGKAEFSQEEELVDDYN 593
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 127/310 (40%), Gaps = 40/310 (12%)
Query: 68 AVSLSQQLELKGIAPDIATLTILINCFCHL-GR-MNYAFSVLGKILKRAYQPDTTALTTL 125
A+ ++++ G+ P +T LI C GR + A ++++ + PD +
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY 791
Query: 126 MKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIE 185
+ LC G + A + D + GF V+V Y I LC +G+ AL L E
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIGFP-----VTVAYSIYIRALCRIGKLEEALSELASFE 846
Query: 186 EEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKA 245
E + LL D +TY ++++G G L+KA
Sbjct: 847 GERS----------------------------LL-----DQYTYGSIVHGLLQRGDLQKA 873
Query: 246 VGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDG 305
+ N MK KP V LI KE+++++ M S EP+V Y +I G
Sbjct: 874 LDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICG 933
Query: 306 YCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPD 365
Y + ++ +A M RG +PD TY+ I+ LC + ++A+ L M K I P
Sbjct: 934 YMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPS 993
Query: 366 AETYSILIEG 375
+ + G
Sbjct: 994 TINFRTVFYG 1003
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/323 (18%), Positives = 130/323 (40%), Gaps = 16/323 (4%)
Query: 104 FSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRF 163
FS +GK + Y+ ++ A +K + + + +++ +G D T+
Sbjct: 665 FSWVGK--RNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQD----TWAI 718
Query: 164 LINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKC--VSDAYDLYNEMLL 219
+I + G T A++ +++++ + +I +CE K V +A + EM+
Sbjct: 719 MIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIR 778
Query: 220 KRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQ 279
PD + C G + A + + P I ALC+ K+++
Sbjct: 779 SGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEE 837
Query: 280 ANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMIS 339
A S +A+ + + Y +++ G + KA ++M G P VH Y +I
Sbjct: 838 ALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIV 897
Query: 340 WLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA- 398
+ +++ + M+ + +P TY+ +I G+++L A N M G +
Sbjct: 898 YFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSP 957
Query: 399 ----YTSKLDAICNDYNFDDEIE 417
Y+ ++ +C +D ++
Sbjct: 958 DFKTYSKFINCLCQACKSEDALK 980
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 165/379 (43%), Gaps = 19/379 (5%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
GI P+ T IL N FC+ L K+ + ++PD TL+ C G ++ A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNT 196
+ + ++ +V VTY LI LC+ G A Q ++ + D YNT
Sbjct: 291 FYLYKIM----YRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNT 346
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN 256
+I + C++ + + L +EML + PD FT ++ GF G+L AV F V+++
Sbjct: 347 LIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNF--VVELRR 404
Query: 257 IKPDV--STCDPLIHALCKERKVKQANSVVAAMIKASV-EPNVFIYNTLIDGYCLINQMT 313
+K D+ CD LI +LC+E K A ++ +I+ E YN LI+ + +
Sbjct: 405 LKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIE 464
Query: 314 KARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
+A L + + D TY +I LC EA SL M ++KPD+ L+
Sbjct: 465 EALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALV 524
Query: 374 EGWLNLPHYMHAINLLAEMCS-----NGIAYTSKLDAICN-DYNFDDEIEKFMRYKETGG 427
G+ + A LL+ + +Y S + A+C + +E R + G
Sbjct: 525 YGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGF 584
Query: 428 DADFLIASHI--VLRNPSF 444
+ L ++ VL PS
Sbjct: 585 VPNRLTCKYLIQVLEQPSL 603
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 94/186 (50%)
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+ D + +Y+ M I P+ +T+N L FC R+ F M+ E +PD+ T +
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
L+ + C+ ++K+A + M + V P++ Y +LI G C ++ +A H M RG
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
+ PD +YN +I C MM ++ L H M + PD T +++EG++ + A+
Sbjct: 337 IKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAV 396
Query: 387 NLLAEM 392
N + E+
Sbjct: 397 NFVVEL 402
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 134/296 (45%), Gaps = 7/296 (2%)
Query: 100 MNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSV 159
M + V + + P+T L C + R +F + ++ +GF+ + V
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDL----V 272
Query: 160 TYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEM 217
TY L++ C G A L + + D+ Y ++IK +C+D V +A+ ++ M
Sbjct: 273 TYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRM 332
Query: 218 LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
+ + I PD +YNTLIY +C G ++++ + M ++ PD TC ++ +E ++
Sbjct: 333 VDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRL 392
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKAR-FLSHTMATRGVTPDVHTYNI 336
A + V + + V+ + + LI C + A+ L + G TYN
Sbjct: 393 LSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNN 452
Query: 337 MISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
+I L + ++EA+ L + ++ DA+TY LI + A +L+AEM
Sbjct: 453 LIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEM 508
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 134/308 (43%), Gaps = 12/308 (3%)
Query: 40 MLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGR 99
M R P + + +++ L + A ++ +GI PD + LI +C G
Sbjct: 297 MYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGM 356
Query: 100 MNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSV 159
M + +L ++L + PD +++G G + SA+NF +++ + +VD
Sbjct: 357 MQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELR----RLKVDIPFE 412
Query: 160 TYRFLINELCEVGETGAALQLL-RQIEEEHTDV--QMYNTIIKSMCEDKCVSDAYDLYNE 216
FLI LC+ G+ AA LL R IEEE + + YN +I+S+ + +A L +
Sbjct: 413 VCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGK 472
Query: 217 MLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERK 276
+ + D TY LI C G+ R+A M +KPD C L++ CKE
Sbjct: 473 LKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELD 532
Query: 277 VKQANSVVA--AMIKASVEPNVFIYNTLIDGYCLIN-QMTKARFLSHTMATRGVTPDVHT 333
+A +++ AM +P YN+L+ C KA L M G P+ T
Sbjct: 533 FDKAERLLSLFAMEFRIFDPES--YNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLT 590
Query: 334 YNIMISWL 341
+I L
Sbjct: 591 CKYLIQVL 598
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 7/238 (2%)
Query: 168 LCEVGETGAALQ-------LLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLK 220
LCE+ E + + L+ +E + D +++ ++K + V + + ++ E+L
Sbjct: 136 LCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDS 195
Query: 221 RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQA 280
S V T N L+ G + ++VM I P+ T + L + C + ++
Sbjct: 196 GFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREV 255
Query: 281 NSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISW 340
+ + M + EP++ YNTL+ YC ++ +A +L M R V PD+ TY +I
Sbjct: 256 DDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKG 315
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA 398
LC + EA FH M + IKPD +Y+ LI + + LL EM N +
Sbjct: 316 LCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVV 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 76/206 (36%), Gaps = 30/206 (14%)
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
D ++ L+ G+ G + + F + V TC+ L++ L K ++ V
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
+ M + + PN + +N L + +C + + M G PD+ TYN ++S C
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKLD 404
+ EA L+ M + + PD + YTS +
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDL------------------------------VTYTSLIK 314
Query: 405 AICNDYNFDDEIEKFMRYKETGGDAD 430
+C D + + F R + G D
Sbjct: 315 GLCKDGRVREAHQTFHRMVDRGIKPD 340
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 142/325 (43%), Gaps = 6/325 (1%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + ++ LV+ N AV+L + G+ P +I C GR + +
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKL 496
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
LG++ +P L + L + A++ ++ GF+ + + FL+
Sbjct: 497 LGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTT----FLVK 552
Query: 167 ELCEVGETGAALQLLRQIEEEHTDVQMYNTI--IKSMCEDKCVSDAYDLYNEMLLKRISP 224
+LCE G A + L + E M + I + +++ V +L+ ++ P
Sbjct: 553 KLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCP 612
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
DV Y+ LI C + +A FN M + +KP V+T + +I CKE ++ + S +
Sbjct: 613 DVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCI 672
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
M + P+V Y +LI G C + ++A F + M + P+ T+ +I LC
Sbjct: 673 VRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKC 732
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETY 369
EA+ F M+ K+++PD+ Y
Sbjct: 733 GWSGEALVYFREMEEKEMEPDSAVY 757
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 132/305 (43%), Gaps = 8/305 (2%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
AV+ H+++ P +NNI+ + + ++ L +++ G+ P TL +
Sbjct: 458 AVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYG 517
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
C A +L K+ ++P T L+K LC NG A + DDV +GF
Sbjct: 518 CLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLG 577
Query: 153 QVDRVSVTYRFLI-NELCEVGETGAALQLLRQI--EEEHTDVQMYNTIIKSMCEDKCVSD 209
+ + LI NE + G L+L R I DV Y+ +IK++C+ +
Sbjct: 578 HMVASTAAIDGLIKNEGVDRG-----LELFRDICANGHCPDVIAYHVLIKALCKACRTME 632
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A L+NEM+ K + P V TYN++I G+C G++ + + M + PDV T LIH
Sbjct: 633 ADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIH 692
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
LC + +A M PN + LI G C +A M + + P
Sbjct: 693 GLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEP 752
Query: 330 DVHTY 334
D Y
Sbjct: 753 DSAVY 757
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 152/374 (40%), Gaps = 66/374 (17%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELK--GIAPDIATLTILINCFCHLGRMNYAF 104
P +N +L ++ + N + ++ E++ G D TLT ++ +C+ G+ A
Sbjct: 175 PNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERAL 234
Query: 105 SVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFL 164
SV +IL R + L+ I + L
Sbjct: 235 SVFNEILSRGW---------------LDEHIST-------------------------IL 254
Query: 165 INELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRI 222
+ C+ G+ A +L+ +EE + + Y +I ++ + A+ L+ +M +
Sbjct: 255 VVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGM 314
Query: 223 SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS 282
+ D+ Y+ LI G C L A+ + +K I PD L+ + +E ++ +
Sbjct: 315 NADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITE 374
Query: 283 VVAAMI-KASVEPNVFIYNTLIDGYCLINQMTKA-RFLSHTMA----------------- 323
V+ I K SV + +Y +L +G+ + + +A F+ + M
Sbjct: 375 VIIGDIDKKSV---MLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDH 431
Query: 324 TRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYM 383
+ + PD + +I+I+ L +N +D A++L H + + P Y+ +IEG
Sbjct: 432 NKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSE 491
Query: 384 HAINLLAEMCSNGI 397
++ LL EM G+
Sbjct: 492 ESLKLLGEMKDAGV 505
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/439 (19%), Positives = 164/439 (37%), Gaps = 89/439 (20%)
Query: 58 SLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQP 117
S + A L + LE + I + T +LI+ F R++ AF + K+ +
Sbjct: 257 SFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNA 316
Query: 118 DTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ-------------------------- 151
D L+ GLC + ++ A++ + ++K G
Sbjct: 317 DIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVI 376
Query: 152 -FQVDRVSVT--YR-----FLINELCEVG-----------ETGAALQLLRQIEEEHT--- 189
+D+ SV Y+ F+ N+L E+ ++++ +++ +
Sbjct: 377 IGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAIL 436
Query: 190 -DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGF 248
D + +I + + V A L ++++ + P YN +I G C G+ +++
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKL 496
Query: 249 FNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEP----NVFIYNTL-- 302
MK ++P T + + L + A ++ M EP F+ L
Sbjct: 497 LGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCE 556
Query: 303 ----IDGYCLINQMTKARFLSHTMAT--------------RGVT-----------PDVHT 333
+D ++ + FL H +A+ RG+ PDV
Sbjct: 557 NGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIA 616
Query: 334 YNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMC 393
Y+++I LC + EA LF+ M K +KP TY+ +I+GW ++ + M
Sbjct: 617 YHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMY 676
Query: 394 SNG-----IAYTSKLDAIC 407
+ I YTS + +C
Sbjct: 677 EDEKNPDVITYTSLIHGLC 695
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 11/222 (4%)
Query: 188 HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVG 247
H D +++ C A ++NE +L R D L+ FC GQ+ KA
Sbjct: 211 HFDKFTLTPVLQVYCNTGKSERALSVFNE-ILSRGWLDEHISTILVVSFCKWGQVDKAFE 269
Query: 248 FFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC 307
+++ +I+ + T LIH KE ++ +A + M + + ++ +Y+ LI G C
Sbjct: 270 LIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLC 329
Query: 308 LINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAE 367
+ A L + G+ PD I+ LC+ + E +S + + DI +
Sbjct: 330 KHKDLEMALSLYLEIKRSGIPPD---RGILGKLLCSFSEESE-LSRITEVIIGDIDKKSV 385
Query: 368 T--YSILIEGWL--NLPHYMHAI--NLLAEMCSNGIAYTSKL 403
Y L EG++ +L H ++ NL+ S+G++ KL
Sbjct: 386 MLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKL 427
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 134/302 (44%), Gaps = 9/302 (2%)
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
L KI +R Y PD++ M L ++ D ++G + + Y L+
Sbjct: 343 LRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFN----GYLVLVQ 398
Query: 167 ELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
L + L+Q+ + + V YN +I +C+ + + +A EM + ISP
Sbjct: 399 ALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISP 458
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
++ T+NT + G+ G ++K G + + KPDV T +I+ LC+ +++K A
Sbjct: 459 NLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCF 518
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
M++ +EPN YN LI C ++ L M G++PD++ YN I C
Sbjct: 519 KEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKM 578
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI---AYTS 401
+ +A L M +KPD TYS LI+ A + + + +G +YT
Sbjct: 579 RKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTK 638
Query: 402 KL 403
+L
Sbjct: 639 RL 640
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 129/311 (41%), Gaps = 37/311 (11%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
H+ V F +S P + ++ +L+ + +Q+ + G+ + +
Sbjct: 368 GHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYS 427
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
+I+C C R+ A L ++ R P+ T + G + G+++ + +
Sbjct: 428 YNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLL 487
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKC 206
GF+ DV ++ II +C K
Sbjct: 488 VHGFK-------------------------------------PDVITFSLIINCLCRAKE 510
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+ DA+D + EML I P+ TYN LI C+ G ++V F MK + PD+ +
Sbjct: 511 IKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNA 570
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
I + CK RKVK+A ++ M++ ++P+ F Y+TLI + ++AR + ++ G
Sbjct: 571 TIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
Query: 327 VTPDVHTYNIM 337
PD +T ++
Sbjct: 631 CVPDSYTKRLV 641
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 168/382 (43%), Gaps = 19/382 (4%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F M S P +N ++ + + A+ L +Q+E +G P++ T TILI+ F
Sbjct: 203 FQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLI 262
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGL--CLN--GEIRSAINFHDDVKAKGFQF 152
GR++ A L + R P+ + T + G+ CL + F + K Q
Sbjct: 263 AGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFME--KDSNLQ- 319
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDA 210
+V +V Y N + + ETG Q LR+I E D +N + + + + +
Sbjct: 320 RVGYDAVLYCLSNNSMAK--ETG---QFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVET 374
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
+++ + + + P Y L+ + + + M ++ + V + + +I
Sbjct: 375 CRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDC 434
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
LCK R+++ A + M + PN+ +NT + GY + + K + + G PD
Sbjct: 435 LCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPD 494
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
V T++++I+ LC + + +A F M I+P+ TY+ILI + ++ L A
Sbjct: 495 VITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFA 554
Query: 391 EMCSNGI-----AYTSKLDAIC 407
+M NG+ AY + + + C
Sbjct: 555 KMKENGLSPDLYAYNATIQSFC 576
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 130/299 (43%), Gaps = 6/299 (2%)
Query: 78 KGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRS 137
+G PD +T ++C + + + R +P L++ L LN + S
Sbjct: 349 RGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQAL-LNAQRFS 407
Query: 138 AINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYN 195
+ + +K G + V +Y +I+ LC+ A L ++++ ++ +N
Sbjct: 408 EGDRY--LKQMGVDGLLSSV-YSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFN 464
Query: 196 TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME 255
T + V + + ++L+ PDV T++ +I C +++ A F M
Sbjct: 465 TFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEW 524
Query: 256 NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA 315
I+P+ T + LI + C ++ + A M + + P+++ YN I +C + ++ KA
Sbjct: 525 GIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKA 584
Query: 316 RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIE 374
L TM G+ PD TY+ +I L S EA +F ++ PD+ T ++ E
Sbjct: 585 EELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEE 643
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 129/336 (38%), Gaps = 48/336 (14%)
Query: 115 YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGET 174
Y D + + L L G + ++ +++ G++ + + V LI +G
Sbjct: 106 YAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCV----LIGSWGRLGLA 161
Query: 175 GAALQLLRQIE--EEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL 232
+ QI ++YN +I ++ + + AY + +M PD FTYN L
Sbjct: 162 KYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNIL 221
Query: 233 IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASV 292
I+G C G + +A+ M+ E +P+V T LI +V +A + M +
Sbjct: 222 IHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKL 281
Query: 293 EPNVFIYNTLIDG---------------------------------YCLI-NQMTK--AR 316
PN T + G YCL N M K +
Sbjct: 282 NPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQ 341
Query: 317 FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
FL + RG PD T+N +S L + + E +F + +KP Y +L++
Sbjct: 342 FL-RKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQAL 400
Query: 377 LNLPHYMHAINLLAEMCSNGI-----AYTSKLDAIC 407
LN + L +M +G+ +Y + +D +C
Sbjct: 401 LNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLC 436
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 177/429 (41%), Gaps = 72/429 (16%)
Query: 24 RPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPD 83
R HEA F + P + + +L ++ Y + S+ ++E G D
Sbjct: 58 RGRPHEAQTV---FKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLD 114
Query: 84 IATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHD 143
+IN F G M A L K+ + P T+ TL+KG + G+ + D
Sbjct: 115 SIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 144 DVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCE 203
+ +G VD VG +++ +N ++++ C+
Sbjct: 175 LMLEEG---NVD---------------VG----------------PNIRTFNVLVQAWCK 200
Query: 204 DKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKA---VGFFNVMKMENIKPD 260
K V +A+++ +M + PD TYNT+ + G+ +A V VMK E KP+
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMK-EKAKPN 259
Query: 261 VSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI----------- 309
TC ++ C+E +V+ V M + VE N+ ++N+LI+G+ +
Sbjct: 260 GRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTL 319
Query: 310 ---------------NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLF 354
NQ K + L+ M V DV TY+ +++ ++ M++A +F
Sbjct: 320 TLLLMSFNEEVELVGNQKMKVQVLT-LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVF 378
Query: 355 HYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLL----AEMCSNGIAYTSKLDAICNDY 410
M +KPDA YSIL +G++ A LL E N + +T+ + C++
Sbjct: 379 KEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNG 438
Query: 411 NFDDEIEKF 419
+ DD + F
Sbjct: 439 SMDDAMRVF 447
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 141/337 (41%), Gaps = 23/337 (6%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P I FN ++ + + A + +++E G+ PD T + C+ G A S
Sbjct: 185 GPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAES 244
Query: 106 --VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRF 163
V ++K +P+ ++ G C G +R + F +K + +V+ V +
Sbjct: 245 EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMK----EMRVEANLVVFNS 300
Query: 164 LINELCEV----GETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLL 219
LIN EV G L LL + +N ++ + K L E +
Sbjct: 301 LINGFVEVMDRDGIDEVTLTLL---------LMSFNEEVELVGNQKMKVQVLTLMKECNV 351
Query: 220 KRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQ 279
K DV TY+T++ + + G + KA F M +KPD L + ++ K+
Sbjct: 352 K---ADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKK 408
Query: 280 ANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMIS 339
A ++ +I S PNV I+ T+I G+C M A + + M GV+P++ T+ ++
Sbjct: 409 AEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMW 467
Query: 340 WLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
+A + M +KP+ T+ +L E W
Sbjct: 468 GYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAW 504
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 155/329 (47%), Gaps = 9/329 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNY--AFSVLGK 109
F+ ++ + R + A+S+ ++ G+ P++ T +I+ C G M + +
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDE 329
Query: 110 ILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELC 169
+ + QPD +L+ G +A N D++ + ++++ +Y L++ +C
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR----RIEQDVFSYNTLLDAIC 385
Query: 170 EVGETGAALQLLRQ--IEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVF 227
+ G+ A ++L Q ++ +V Y+T+I + +A +L+ EM I+ D
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 228 TYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
+YNTL+ + G+ +A+ M IK DV T + L+ K+ K + V M
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 288 IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMM 347
+ V PN+ Y+TLIDGY +A + + G+ DV Y+ +I LC + ++
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 348 DEAMSLFHYMDLKDIKPDAETYSILIEGW 376
A+SL M + I P+ TY+ +I+ +
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 146/333 (43%), Gaps = 18/333 (5%)
Query: 88 TILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKA 147
+ +I+ G++ A + Y A + L+ +G AI+ + +K
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 148 KGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE------HTDVQMYNTIIKSM 201
G + + VTY +I+ G+ G + + + +E D +N+++
Sbjct: 297 YGLRPNL----VTYNAVIDA---CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVC 349
Query: 202 CEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDV 261
A +L++EM +RI DVF+YNTL+ C GGQ+ A M ++ I P+V
Sbjct: 350 SRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNV 409
Query: 262 STCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHT 321
+ +I K + +A ++ M + + YNTL+ Y + + +A +
Sbjct: 410 VSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILRE 469
Query: 322 MATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPH 381
MA+ G+ DV TYN ++ DE +F M + + P+ TYS LI+G+
Sbjct: 470 MASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGL 529
Query: 382 YMHAINLLAEMCSNG-----IAYTSKLDAICND 409
Y A+ + E S G + Y++ +DA+C +
Sbjct: 530 YKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 129/304 (42%), Gaps = 37/304 (12%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P FN++L R + A +L ++ + I D+ + L++ C G+M+ AF +
Sbjct: 337 PDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEI 396
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
L ++ + P+ + +T++ G G A+N +++ G +DRVS Y L++
Sbjct: 397 LAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA--LDRVS--YNTLLS 452
Query: 167 ELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
+VG + AL +LR EM I DV
Sbjct: 453 IYTKVGRSEEALDILR---------------------------------EMASVGIKKDV 479
Query: 227 FTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAA 286
TYN L+ G+ G+ + F MK E++ P++ T LI K K+A +
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE 539
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNM 346
A + +V +Y+ LID C + A L M G++P+V TYN +I S
Sbjct: 540 FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSAT 599
Query: 347 MDEA 350
MD +
Sbjct: 600 MDRS 603
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 99/212 (46%), Gaps = 12/212 (5%)
Query: 44 RPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYA 103
R P + ++ ++ + + A++L ++ GIA D + L++ + +GR A
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA 463
Query: 104 FSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVS---VT 160
+L ++ + D L+ G G+ +D+VK + + + V +T
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGK-------YDEVKKVFTEMKREHVLPNLLT 516
Query: 161 YRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEML 218
Y LI+ + G A+++ R+ + DV +Y+ +I ++C++ V A L +EM
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 219 LKRISPDVFTYNTLIYGFCAGGQLRKAVGFFN 250
+ ISP+V TYN++I F + ++ + N
Sbjct: 577 KEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 161/383 (42%), Gaps = 53/383 (13%)
Query: 34 VSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINC 93
V +++S P FN ++ + ++ L ++ G PD+ T+T ++
Sbjct: 233 VGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEV 292
Query: 94 FCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQ 153
C+ GR++ A VL ++ + + D A TL+KG C G++R A F +++ KG+
Sbjct: 293 LCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPN 352
Query: 154 VDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAY 211
V+ TY LI C+VG +AL ++ + + +NT+I+ + D
Sbjct: 353 VE----TYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGL 408
Query: 212 DLYNEML------LKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPD----- 260
+ M RI P YN +IYGF + A+ F ++KME + P
Sbjct: 409 KILEMMQDSDTVHGARIDP----YNCVIYGFYKENRWEDALEF--LLKMEKLFPRAVDRS 462
Query: 261 ---VSTCDP---------------------------LIHALCKERKVKQANSVVAAMIKA 290
+S C+ LIH + K++++ ++ M+
Sbjct: 463 FKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTR 522
Query: 291 SVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEA 350
P +N +I G+C +++ MA RG PD +YN ++ LC + +A
Sbjct: 523 GYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKA 582
Query: 351 MSLFHYMDLKDIKPDAETYSILI 373
LF M K I PD +S L+
Sbjct: 583 WLLFSRMVEKSIVPDPSMWSSLM 605
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 146/340 (42%), Gaps = 11/340 (3%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G+ PD A +I F + SV+ + K +P +++ L +
Sbjct: 107 GLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAR 166
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNT 196
F + A G V TY L+ L G +LL+ ++ + +YNT
Sbjct: 167 EFFTRKMMASGIHGDV----YTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNT 222
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN 256
++ ++C++ V A L +EM P+ T+N LI +C +L +++
Sbjct: 223 LLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLG 278
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKAR 316
PDV T ++ LC E +V +A V+ + + +V NTL+ GYC + +M A+
Sbjct: 279 FVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQ 338
Query: 317 FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
M +G P+V TYN++I+ C M+D A+ F+ M I+ + T++ LI G
Sbjct: 339 RFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGL 398
Query: 377 LNLPHYMHAINLLAEMCSNGIAYTSKLDAI-CNDYNFDDE 415
+ +L M + + +++D C Y F E
Sbjct: 399 SIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKE 438
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 163/436 (37%), Gaps = 81/436 (18%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + FN+IL LV+ + ++++ GI D+ T IL+ R+ F +
Sbjct: 145 PSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKL 204
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK------------------ 148
L + P+ TL+ LC NG++ A + ++K
Sbjct: 205 LQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKL 264
Query: 149 -----------GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYN 195
F D V+VT ++ LC G AL++L ++E + DV N
Sbjct: 265 IQSMVLLEKCFSLGFVPDVVTVTK--VMEVLCNEGRVSEALEVLERVESKGGKVDVVACN 322
Query: 196 TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME 255
T++K C + A + EM K P+V TYN LI G+C G L A+ FN MK +
Sbjct: 323 TLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTD 382
Query: 256 NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK------ASVEPNVFIYNTLIDGY--- 306
I+ + +T + LI L + ++ M A ++P YN +I G+
Sbjct: 383 AIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP----YNCVIYGFYKE 438
Query: 307 ------------------------------CLINQMTKARFLSHTMATRGVTPDVHTYNI 336
C M + M G P + +
Sbjct: 439 NRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHC 498
Query: 337 MISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
+I ++E++ L + M + P + T++ +I G+ M+ I + +M G
Sbjct: 499 LIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERG 558
Query: 397 I-----AYTSKLDAIC 407
+Y L+ +C
Sbjct: 559 CVPDTESYNPLLEELC 574
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 10/251 (3%)
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLK-RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
Y + +C + Y L +EM + PD + T+I GF +++ + +++
Sbjct: 79 YRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLV 138
Query: 253 KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQM 312
IKP + + ++ L KE M+ + + +V+ Y L+ G L N++
Sbjct: 139 SKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRI 198
Query: 313 TKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSIL 372
L M T GV P+ YN ++ LC + + A SL M +P+ T++IL
Sbjct: 199 GDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNIL 254
Query: 373 IEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYKETGG 427
I + N + ++ LL + S G + T ++ +CN+ + +E R + GG
Sbjct: 255 ISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGG 314
Query: 428 DADFLIASHIV 438
D + + +V
Sbjct: 315 KVDVVACNTLV 325
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 108/275 (39%), Gaps = 42/275 (15%)
Query: 160 TYRFLINELCEVGETGAALQLLRQIEEE---HTDVQMYNTIIKSMCE------------- 203
TYR L ++LC QLL ++ + D ++ TII+
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 204 -----------------DKCVSDAYDLYNE-----MLLKRISPDVFTYNTLIYGFCAGGQ 241
D V + D+ E M+ I DV+TY L+ G +
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNR 197
Query: 242 LRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNT 301
+ +MK + P+ + L+HALCK KV +A S+++ M EPN +N
Sbjct: 198 IGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEM----KEPNDVTFNI 253
Query: 302 LIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKD 361
LI YC ++ ++ L + G PDV T ++ LC + EA+ + ++ K
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG 313
Query: 362 IKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
K D + L++G+ L A EM G
Sbjct: 314 GKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKG 348
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 7/300 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+N L R H+ A L + ++ +G P ILI R + V K+
Sbjct: 161 YNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMK 220
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
K ++P +M L NG A+ ++D K G + S T+ L+ LC+
Sbjct: 221 KFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEE----STTFMILVKGLCKA 276
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
G L++L+++ E DV Y +IK++ + + + +++EM I PDV Y
Sbjct: 277 GRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAY 336
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
TL+ G C G++ + F MK + I D LI + KV+ A ++ ++
Sbjct: 337 GTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVD 396
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYN-IMISWLCTSNMMD 348
+ ++ IYN +I G C +NQ+ KA L + PD T + IM++++ + + D
Sbjct: 397 SGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSD 456
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 154/331 (46%), Gaps = 11/331 (3%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + +N I+ +LV+ ++ A+++ + + G+ + T IL+ C GR+ +
Sbjct: 226 PRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEI 285
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
L ++ + +PD A T ++K L G + +++ D+++ + V + Y L+
Sbjct: 286 LQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDV----MAYGTLVV 341
Query: 167 ELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
LC+ G +L +++ + D ++Y +I+ D V A +L+ +++
Sbjct: 342 GLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIA 401
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
D+ YN +I G C+ Q+ KA F V E ++PD T P++ A ++ ++V+
Sbjct: 402 DIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVL 461
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLS--HTMATRGVTPDVHTYNIMISWLC 342
+ + V Y T ++ A L + + T+G V YNI++ L
Sbjct: 462 ERI--GELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKG-HGSVSVYNILMEALY 518
Query: 343 TSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
+ +++SLF+ M +PD+ +YSI I
Sbjct: 519 KMGDIQKSLSLFYEMRKLGFEPDSSSYSIAI 549
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 5/253 (1%)
Query: 192 QMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNV 251
+ + +I+ +++ Y +Y +M P VF YN ++ G A+ +
Sbjct: 194 KQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYED 253
Query: 252 MKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQ 311
K + + + +T L+ LCK ++++ ++ M + +P+VF Y +I
Sbjct: 254 FKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGN 313
Query: 312 MTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSI 371
+ + + M + PDV Y ++ LC ++ LF M K I D E Y +
Sbjct: 314 LDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRV 373
Query: 372 LIEGWLNLPHYMHAINLLAEMCSNG-IA----YTSKLDAICNDYNFDDEIEKFMRYKETG 426
LIEG++ A NL ++ +G IA Y + + +C+ D + F E
Sbjct: 374 LIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEE 433
Query: 427 GDADFLIASHIVL 439
+ DF S I++
Sbjct: 434 LEPDFETLSPIMV 446
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/367 (19%), Positives = 144/367 (39%), Gaps = 43/367 (11%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + + ++ +LV + ++ + ++ I PD+ L+ C GR+ + +
Sbjct: 296 PDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYEL 355
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
++ + D L++G +G++RSA N +D+ G+ + Y +I
Sbjct: 356 FMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIG----IYNAVIK 411
Query: 167 ELCEVGETGAALQLLR-QIEEE-HTDVQMYNTII-------------------------- 198
LC V + A +L + IEEE D + + I+
Sbjct: 412 GLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPV 471
Query: 199 --------KSMCEDKCVSD-AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
K +C D+ + A D++ +L + V YN L+ G ++K++ F
Sbjct: 472 SDYLTQFFKLLCADEEKNAMALDVFY-ILKTKGHGSVSVYNILMEALYKMGDIQKSLSLF 530
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
M+ +PD S+ I ++ VK A S +I+ S P++ Y +L G C I
Sbjct: 531 YEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQI 590
Query: 310 NQMTKARFL-SHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAET 368
++ L + P Y + + +C + ++ M + M+ + + +
Sbjct: 591 GEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVI 650
Query: 369 YSILIEG 375
Y +I G
Sbjct: 651 YCAIISG 657
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 40 MLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGR 99
+L + ++ +N ++ +L +M ++SL ++ G PD ++ +I I CF G
Sbjct: 498 ILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGD 557
Query: 100 MNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAI----NFHDDVKAKGFQFQVD 155
+ A S KI++ + P A +L KGLC GEI + + +V++ +F+
Sbjct: 558 VKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFK-- 615
Query: 156 RVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQ--MYNTIIKSMCEDKCVSDAYDL 213
Y + +C+ ++++ ++ +E + +Y II M + + A ++
Sbjct: 616 -----YALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREV 670
Query: 214 YNEMLLKRI--SPDVFTYNTLI 233
+ E+ +++ D+ Y ++
Sbjct: 671 FTELKKRKVMTEADMVVYEEML 692
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 6/275 (2%)
Query: 103 AFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYR 162
A ++++ +P L L+ LC + A F KAKGF + + TY
Sbjct: 157 ACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFG--KAKGFG--IVPSAKTYS 212
Query: 163 FLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLK 220
L+ + + A ++ ++ E + D+ YN ++ ++C+ V Y ++ EM
Sbjct: 213 ILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNL 272
Query: 221 RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQA 280
+ PD +++ I+ +C G + A + MK ++ P+V T + +I LCK KV A
Sbjct: 273 GLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDA 332
Query: 281 NSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISW 340
++ MI+ P+ + YN+++ +C ++ +A L M PD HTYN+++
Sbjct: 333 YLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKL 392
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
L D A ++ M + P TY+++I G
Sbjct: 393 LIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHG 427
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 143/323 (44%), Gaps = 13/323 (4%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
A +F+ M+ P + + +L SL H A + + GI P T +IL+
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ + + A V ++L+R D A L+ LC +G++ ++ G +
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSD 209
+ ++ I+ C+ G+ +A ++L +++ +V +N IIK++C+++ V D
Sbjct: 276 PD----AYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDD 331
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
AY L +EM+ K +PD +TYN+++ C ++ +A + M PD T + ++
Sbjct: 332 AYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLK 391
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTK----ARFLSHTMATR 325
L + + +A + M + P V Y +I G L+ + K R+ M
Sbjct: 392 LLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHG--LVRKKGKLEEACRYFE-MMIDE 448
Query: 326 GVTPDVHTYNIMISWLCTSNMMD 348
G+ P T ++ + L MD
Sbjct: 449 GIPPYSTTVEMLRNRLVGWGQMD 471
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%)
Query: 192 QMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNV 251
+ Y+ +++ + S A +++EML + D+ YN L+ C G + F
Sbjct: 209 KTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQE 268
Query: 252 MKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQ 311
M +KPD + IHA C V A V+ M + + PNV+ +N +I C +
Sbjct: 269 MGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEK 328
Query: 312 MTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSI 371
+ A L M +G PD TYN ++++ C ++ A L MD PD TY++
Sbjct: 329 VDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNM 388
Query: 372 LIEGWLNLPHYMHAINLLAEM 392
+++ + + + A + M
Sbjct: 389 VLKLLIRIGRFDRATEIWEGM 409
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 118/266 (44%), Gaps = 7/266 (2%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
+A A F ML + +N +L +L + + Q++ G+ PD +
Sbjct: 223 DASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFA 282
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
I I+ +C G ++ A+ VL ++ + P+ ++K LC N ++ A D++ K
Sbjct: 283 IFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQK 342
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKC 206
G + + TY ++ C+ E A +LL +++ D YN ++K +
Sbjct: 343 G----ANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGR 398
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFC-AGGQLRKAVGFFNVMKMENIKPDVSTCD 265
A +++ M ++ P V TY +I+G G+L +A +F +M E I P +T +
Sbjct: 399 FDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVE 458
Query: 266 PLIHALCKERKVKQANSVVAAMIKAS 291
L + L ++ + + M ++S
Sbjct: 459 MLRNRLVGWGQMDVVDVLAGKMERSS 484
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 5/176 (2%)
Query: 244 KAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLI 303
+A FN M IKP V D L+H+LC ++ V A + P+ Y+ L+
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 304 DGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIK 363
G+ I + AR + M R D+ YN ++ LC S +D +F M +K
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 364 PDAETYSILIEGWLNLPHYMHAINLLAEM-----CSNGIAYTSKLDAICNDYNFDD 414
PDA +++I I + + A +L M N + + +C + DD
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDD 331
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 166/376 (44%), Gaps = 26/376 (6%)
Query: 15 FMRY----HSHSPRPFS----------HEAVNAVSSFHNMLSMRPAPPITQFNNILGSLV 60
F R+ + ++P P S +AV A SF + +P P T + L
Sbjct: 99 FFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPEP--TLLEQYVKCLS 156
Query: 61 RMNHYPTAVSLSQQLELKGIAPDIATL-TILINCFCHLGRMNYAFSVLGKILKRAYQPDT 119
A+ + L+ GI+ + T ++L+ C +++ + + ++++ + D+
Sbjct: 157 EEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCL-KARKLDRFWELHKEMVESEF--DS 213
Query: 120 TALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQ 179
+ L++ LC G++ ++ +G + +D Y LI+ CE+G +
Sbjct: 214 ERIRCLIRALCDGGDVSEGY----ELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSE 269
Query: 180 LLR-QIEEEH-TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFC 237
+L I H + +Y IIK +C +K +AY ++ + K +PD Y T+I GFC
Sbjct: 270 VLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFC 329
Query: 238 AGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVF 297
G L A + M + ++P+ + +IH K ++ + M++ +
Sbjct: 330 EKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTML 389
Query: 298 IYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYM 357
NT+I G+C + +A + M+ GVTP+ TYN +I C N +++ + L+ +
Sbjct: 390 SCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
Query: 358 DLKDIKPDAETYSILI 373
+KP Y+ L+
Sbjct: 450 KALGLKPSGMAYAALV 465
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 141/355 (39%), Gaps = 13/355 (3%)
Query: 45 PAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAF 104
P P N + G+L+ A S L+ G P+ L + C G + A
Sbjct: 111 PGP--VSLNILFGALLDGKAVKAAKSF---LDTTGFKPEPTLLEQYVKCLSEEGLVEEAI 165
Query: 105 SVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFL 164
V + +++ G ++ H ++ +F +R+ R L
Sbjct: 166 EVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVES--EFDSERI----RCL 219
Query: 165 INELCEVGETGAALQLLRQIEEEHTDVQ--MYNTIIKSMCEDKCVSDAYDLYNEMLLKRI 222
I LC+ G+ +LL+Q ++ D +Y +I CE + ++ + M+
Sbjct: 220 IRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNH 279
Query: 223 SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS 282
P ++ Y +I G C + +A F +K + PD +I C++ + A
Sbjct: 280 FPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARK 339
Query: 283 VVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC 342
+ MIK + PN F YN +I G+ +++ + M G + + N MI C
Sbjct: 340 LWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFC 399
Query: 343 TSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
+ DEA +F M + P+A TY+ LI+G+ + L E+ + G+
Sbjct: 400 SHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGL 454
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 38/283 (13%)
Query: 71 LSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLC 130
L Q L+ +G+ P LI+ FC +G VL ++ + P ++KGLC
Sbjct: 236 LKQGLK-QGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLC 294
Query: 131 LNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTD 190
+N + A ++K KG+ DRV
Sbjct: 295 MNKKQLEAYCIFKNLKDKGYA--PDRV--------------------------------- 319
Query: 191 VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFN 250
+Y T+I+ CE + A L+ EM+ K + P+ F YN +I+G G++ F+N
Sbjct: 320 --VYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYN 377
Query: 251 VMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLIN 310
M + +C+ +I C K +A + M + V PN YN LI G+C N
Sbjct: 378 EMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKEN 437
Query: 311 QMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSL 353
++ K L + G+ P Y ++ L S+ + +++L
Sbjct: 438 KVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 139/314 (44%), Gaps = 14/314 (4%)
Query: 82 PDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINF 141
PD T ILI+ G + A + +++K+ +P TL+ GLC + ++ A+
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 142 -HDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTII 198
HD +K G + V Y LI LC++GE A +L + E D +Y+T+I
Sbjct: 210 KHDMLKVYGVRPTVH----IYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLI 265
Query: 199 KSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
S+ + ++ + EM K PD TYN LI GFC A + M + +K
Sbjct: 266 SSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLK 325
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFL 318
PDV + + ++ + +K ++A + M + P+ Y + DG C Q +A +
Sbjct: 326 PDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVI 385
Query: 319 SHTMATRGVTPDVHTYNIMISWLCTSN---MMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
M +G P + LC S ++ + +S H + I DA+ +S++I
Sbjct: 386 LDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLH----RGIAGDADVWSVMIPT 441
Query: 376 WLNLPHYMHAINLL 389
P +I+LL
Sbjct: 442 MCKEPVISDSIDLL 455
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 147/323 (45%), Gaps = 20/323 (6%)
Query: 116 QPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETG 175
+PD L+ G +G A+ D++ K +V VT+ LI+ LC+
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKK----KVKPTGVTFGTLIHGLCKDSRVK 204
Query: 176 AALQL---LRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL 232
AL++ + ++ V +Y ++IK++C+ +S A+ L +E +I D Y+TL
Sbjct: 205 EALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTL 264
Query: 233 IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASV 292
I G+ + M + KPD T + LI+ C E + AN V+ M++ +
Sbjct: 265 ISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
Query: 293 EPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMS 352
+P+V YN ++ + I + +A +L M RG +PD +Y I+ LC +EA
Sbjct: 325 KPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAV 384
Query: 353 LFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSN---GIA-----YTSKLD 404
+ M K KP + +EG+L + +L+++ S+ GIA ++ +
Sbjct: 385 ILDEMLFKGYKPRRDR----LEGFLQKLCESGKLEILSKVISSLHRGIAGDADVWSVMIP 440
Query: 405 AICNDYNFDDEIEKFMR-YKETG 426
+C + D I+ + KE G
Sbjct: 441 TMCKEPVISDSIDLLLNTVKEDG 463
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 115/297 (38%), Gaps = 75/297 (25%)
Query: 193 MYNTIIKSMCEDKCVSDAYDLYNEM---------------------------LLKRIS-- 223
++ +I K S A +++EM + +R+S
Sbjct: 85 IFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSI 144
Query: 224 -----PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVK 278
PD TYN LI+G G A+ F+ M + +KP T LIH LCK+ +VK
Sbjct: 145 DEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVK 204
Query: 279 QANSVVAAMIKA-SVEPNVFIYNTLIDGYCLINQMT------------------------ 313
+A + M+K V P V IY +LI C I +++
Sbjct: 205 EALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTL 264
Query: 314 -----------KARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDI 362
+ + M+ +G PD TYN++I+ C N + A + M K +
Sbjct: 265 ISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
Query: 363 KPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDD 414
KPD +Y++++ + + + A L +M G ++Y D +C F++
Sbjct: 325 KPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEE 381
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 107/277 (38%), Gaps = 39/277 (14%)
Query: 32 NAVSSFHNMLSMRPAPPITQ-FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
A+ H+ML + P + +++ +L ++ A L + I D A + L
Sbjct: 205 EALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTL 264
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
I+ GR N +L ++ ++ +PDT L+ G C+ + SA D++ KG
Sbjct: 265 ISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDA 210
+ DV YN I+ K +A
Sbjct: 325 K-------------------------------------PDVISYNMILGVFFRIKKWEEA 347
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
L+ +M + SPD +Y + G C G Q +A + M + KP + +
Sbjct: 348 TYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQK 407
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC 307
LC+ K++ + V++++ + + + +++ +I C
Sbjct: 408 LCESGKLEILSKVISSLHRG-IAGDADVWSVMIPTMC 443
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 138/329 (41%), Gaps = 37/329 (11%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + +N ++ V+ A+ Q++ + PD+ T ILIN +C + + A +
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
++ ++ +P+ + TL++G +G+I + ++ G +F
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFS------------E 298
Query: 167 ELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
CE+ ++ +C + V DA L ++L KR+ P
Sbjct: 299 ATCEI-------------------------LVDGLCREGRVDDACGLVLDLLNKRVLPSE 333
Query: 227 FTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAA 286
F Y +L+ C + +A+ + + P C L+ L K + ++A+ +
Sbjct: 334 FDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEK 393
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNM 346
M+ A + P+ +N L+ C + T A L +++G PD TY++++S
Sbjct: 394 MMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGR 453
Query: 347 MDEAMSLFHYMDLKDIKPDAETYSILIEG 375
E L + M KD+ PD TY+ L++G
Sbjct: 454 RKEGEVLVNEMLDKDMLPDIFTYNRLMDG 482
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 2/238 (0%)
Query: 161 YRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEML 218
Y ++N + G+ AL+ +++ +E DV +N +I C A DL+ EM
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 219 LKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVK 278
K P+V ++NTLI GF + G++ + V M + +TC+ L+ LC+E +V
Sbjct: 256 EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVD 315
Query: 279 QANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMI 338
A +V ++ V P+ F Y +L++ C N+ +A + + +G TP ++
Sbjct: 316 DACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLV 375
Query: 339 SWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
L S ++A M I PD+ T+++L+ + H A L S G
Sbjct: 376 EGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKG 433
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 5/207 (2%)
Query: 193 MYNTIIKSMCEDKCVSDAYDLYNEMLLKRI---SPDVFTYNTLIYGFCAGGQLRKAVGFF 249
++ + I + C + + A ++ M KR+ P+V YNT++ G+ G + KA+ F+
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTM--KRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
M E KPDV T + LI+ C+ K A + M + EPNV +NTLI G+
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
++ + +++ M G T I++ LC +D+A L + K + P Y
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDY 336
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNG 396
L+E + A+ ++ E+ G
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKG 363
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 120/313 (38%), Gaps = 38/313 (12%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+ + M R P + FN ++ R + + A+ L ++++ KG P++ + LI
Sbjct: 212 ALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIR 271
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
F G++ + ++++ + L+ GLC G + A D+ K
Sbjct: 272 GFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK---- 327
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYD 212
R L +E Y ++++ +C + A +
Sbjct: 328 ---------RVLPSEF------------------------DYGSLVEKLCGENKAVRAME 354
Query: 213 LYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALC 272
+ E+ K +P TL+ G G+ KA GF M I PD T + L+ LC
Sbjct: 355 MMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLC 414
Query: 273 KERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVH 332
AN + EP+ Y+ L+ G+ + + L + M + + PD+
Sbjct: 415 SSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIF 474
Query: 333 TYNIMISWL-CTS 344
TYN ++ L CT
Sbjct: 475 TYNRLMDGLSCTG 487
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 268 IHALCKERKVKQANSVVAAMIK-ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
I A C+ RK+ A M + +PNV +YNT+++GY M KA M
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKER 223
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
PDV T+NI+I+ C S+ D A+ LF M K +P+ +++ LI G+L+ +
Sbjct: 224 AKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGV 283
Query: 387 NLLAEMCSNGIAYTSK-----LDAICNDYNFDD 414
+ EM G ++ +D +C + DD
Sbjct: 284 KMAYEMIELGCRFSEATCEILVDGLCREGRVDD 316
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 7/195 (3%)
Query: 55 ILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRA 114
++ L R A L L K + P L+ C + A ++ ++ K+
Sbjct: 304 LVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKG 363
Query: 115 YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGET 174
P A TTL++GL +G A F + + G SVT+ L+ +LC +
Sbjct: 364 QTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPD----SVTFNLLLRDLCSSDHS 419
Query: 175 GAA--LQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL 232
A L+LL + D Y+ ++ ++ + L NEML K + PD+FTYN L
Sbjct: 420 TDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRL 479
Query: 233 IYGF-CAGGQLRKAV 246
+ G C G RK V
Sbjct: 480 MDGLSCTGKFSRKQV 494
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 142/311 (45%), Gaps = 20/311 (6%)
Query: 98 GRMNYAFSV-LGKILKRAY--QPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQV 154
GR ++ S+ L K ++R +P+ T ++ L G + + D++ ++G V
Sbjct: 117 GRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQG----V 172
Query: 155 DRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTD--VQMYNTIIKSMCEDKCVSDAYD 212
R +Y LIN G +L+LL +++ E + YNT+I + C D
Sbjct: 173 SRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-----CARGGLD 227
Query: 213 ------LYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
L+ EM + I PD+ TYNTL+ G +A F M I PD++T
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
L+ K R++++ ++ M P++ YN L++ Y + +A + H M G
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
TP+ +TY+++++ S D+ LF M + PDA TY+ILIE + ++ +
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 407
Query: 387 NLLAEMCSNGI 397
L +M I
Sbjct: 408 TLFHDMVEENI 418
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 149/356 (41%), Gaps = 14/356 (3%)
Query: 82 PDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINF 141
P+ TI+I+ G ++ V ++ + + T L+ NG +++
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 142 HDDVKAKGFQFQVDRVSVTYRFLINELCEVG-ETGAALQLLRQIEEE--HTDVQMYNTII 198
D +K + + +TY +IN G + L L ++ E D+ YNT++
Sbjct: 199 LDRMKNEKISPSI----LTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLL 254
Query: 199 KSMCEDKCVSDAYDL-YNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENI 257
S C + + D ++ + M I PD+ TY+ L+ F +L K M
Sbjct: 255 -SACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS 313
Query: 258 KPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARF 317
PD+++ + L+ A K +K+A V M A PN Y+ L++ + + R
Sbjct: 314 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373
Query: 318 LSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWL 377
L M + PD TYNI+I E ++LFH M ++I+PD ETY +I
Sbjct: 374 LFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACG 433
Query: 378 NLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKFMRYKETGGD 428
+ A +L M +N I AYT ++A +++ + F E G +
Sbjct: 434 KGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN 489
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 155/384 (40%), Gaps = 42/384 (10%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P I +N +L + A + + + GI PD+ T + L+ F L R+ +
Sbjct: 245 PDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDL 304
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
LG++ PD T+ L++ +G I+ A+ ++A G + TY L+N
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN----TYSVLLN 360
Query: 167 ELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
+ G QL +++ +TD PD
Sbjct: 361 LFGQSGRYDDVRQLFLEMKSSNTD---------------------------------PDA 387
Query: 227 FTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAA 286
TYN LI F GG ++ V F+ M ENI+PD+ T + +I A K + A ++
Sbjct: 388 ATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQY 447
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNM 346
M + P+ Y +I+ + +A +TM G P + T++ ++ +
Sbjct: 448 MTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGL 507
Query: 347 MDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSK-LDA 405
+ E+ ++ + I + +T++ IE + + A+ +M + + L+A
Sbjct: 508 VKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEA 567
Query: 406 ICNDYNF----DDEIEKFMRYKET 425
+ + Y+F D+ E+F K +
Sbjct: 568 VLSVYSFARLVDECREQFEEMKAS 591
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 146/364 (40%), Gaps = 43/364 (11%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F M S + + + ++ + R Y T++ L +++ + I+P I T +IN C
Sbjct: 164 FDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CA 222
Query: 97 LGRMNYA--FSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQV 154
G +++ + ++ QPD TL+ + G
Sbjct: 223 RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG-------------------LG 263
Query: 155 DRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLY 214
D + +R + G + D+ Y+ ++++ + + + DL
Sbjct: 264 DEAEMVFRTM--------NDGGIV----------PDLTTYSHLVETFGKLRRLEKVCDLL 305
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
EM PD+ +YN L+ + G +++A+G F+ M+ P+ +T L++ +
Sbjct: 306 GEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQS 365
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY 334
+ + M ++ +P+ YN LI+ + + L H M + PD+ TY
Sbjct: 366 GRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETY 425
Query: 335 NIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI---NLLAE 391
+I + ++A + YM DI P ++ Y+ +IE + Y A+ N + E
Sbjct: 426 EGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHE 485
Query: 392 MCSN 395
+ SN
Sbjct: 486 VGSN 489
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/378 (19%), Positives = 151/378 (39%), Gaps = 18/378 (4%)
Query: 40 MLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGR 99
M S P IT +N +L + + A+ + Q++ G P+ T ++L+N F GR
Sbjct: 308 MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR 367
Query: 100 MNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAIN-FHDDVKAKGFQFQVDRVS 158
+ + ++ PD L++ G + + FHD V+ ++
Sbjct: 368 YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE-----NIEPDM 422
Query: 159 VTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNE 216
TY +I + G A ++L+ + + Y +I++ + +A +N
Sbjct: 423 ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNT 482
Query: 217 MLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERK 276
M +P + T+++L+Y F GG ++++ + + I + T + I A + K
Sbjct: 483 MHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGK 542
Query: 277 VKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNI 336
++A M K+ +P+ ++ Y + + R M + P + Y +
Sbjct: 543 FEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCM 602
Query: 337 MISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG-------WLNLPHYMHAINLL 389
M++ + D+ L M + + +I+G W + + + +N
Sbjct: 603 MLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLN-- 660
Query: 390 AEMCSNGIA-YTSKLDAI 406
+E C GI Y + LDA+
Sbjct: 661 SEGCGLGIRFYNALLDAL 678
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 161/371 (43%), Gaps = 6/371 (1%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+S FH M +++++ L + ++ + + + + + + LI
Sbjct: 65 ALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQ 124
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
+ G ++ A V KI +L TL+ L NGE+ A +F D K
Sbjct: 125 HYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK----DM 180
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTD--VQMYNTIIKSMCEDKCVSDA 210
++ SV++ LI + + AA ++ ++ E V YN++I +C + + A
Sbjct: 181 RLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
L +M+ KRI P+ T+ L+ G C G+ +A M+ KP + L+
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
L K ++ +A ++ M K ++P+V IYN L++ C ++ +A + M +G P+
Sbjct: 301 LGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPN 360
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
TY +MI C D +++ + M P T+ ++ G + + HA +L
Sbjct: 361 AATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLE 420
Query: 391 EMCSNGIAYTS 401
M +++ S
Sbjct: 421 VMGKKNLSFGS 431
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 102/228 (44%), Gaps = 5/228 (2%)
Query: 191 VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFN 250
+Q NT+I + ++ + A ++ R+ P+ ++N LI GF A F+
Sbjct: 151 IQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFD 210
Query: 251 VMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLIN 310
M ++P V T + LI LC+ + +A S++ MIK + PN + L+ G C
Sbjct: 211 EMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKG 270
Query: 311 QMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
+ +A+ L M RG P + Y I++S L +DEA L M + IKPD Y+
Sbjct: 271 EYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYN 330
Query: 371 ILIEGWLNLPHYMHAINLLAEM----CS-NGIAYTSKLDAICNDYNFD 413
IL+ A +L EM C N Y +D C +FD
Sbjct: 331 ILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFD 378
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 124/297 (41%), Gaps = 6/297 (2%)
Query: 29 EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLT 88
E A S F MR P FN ++ + + A + ++ + P + T
Sbjct: 166 ELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYN 225
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
LI C M A S+L ++K+ +P+ LMKGLC GE A D++ +
Sbjct: 226 SLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYR 285
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKC 206
G + + V Y L+++L + G A LL ++++ DV +YN ++ +C +
Sbjct: 286 GCKPGL----VNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECR 341
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
V +AY + EM +K P+ TY +I GFC + N M P +T
Sbjct: 342 VPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVC 401
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMA 323
++ L K + A V+ M K ++ + L+ C+ + LS ++
Sbjct: 402 MVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGVYCEALSEVIS 458
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 138/335 (41%), Gaps = 8/335 (2%)
Query: 13 SLFMRYHSHSPRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLS 72
SLFM H + S + A+ FH + S I N ++ LV A S
Sbjct: 117 SLFMGLIQHYGKAGSVD--KAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFF 174
Query: 73 QQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLN 132
+ + P+ + ILI F A V ++L+ QP +L+ LC N
Sbjct: 175 DGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRN 234
Query: 133 GEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQ 192
++ A + +D+ K ++ +VT+ L+ LC GE A +L+ +E
Sbjct: 235 DDMGKAKSLLEDMIKK----RIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPG 290
Query: 193 M--YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFN 250
+ Y ++ + + + +A L EM +RI PDV YN L+ C ++ +A
Sbjct: 291 LVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLT 350
Query: 251 VMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLIN 310
M+M+ KP+ +T +I C+ +V+ AM+ + P + ++ G
Sbjct: 351 EMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGG 410
Query: 311 QMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSN 345
+ A F+ M + ++ + ++S LC +
Sbjct: 411 NLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKD 445
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 155/362 (42%), Gaps = 18/362 (4%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKG---IAPDIATLTILINCFCHLGRMNYAFS 105
I + +++ L +M + L +++ + I P++ +L+ F + A
Sbjct: 147 IEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPEL--FVVLVQRFASADMVKKAIE 204
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
VL ++ K ++PD L+ LC +G ++ A +D++ R V R+
Sbjct: 205 VLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRM--------RFPVNLRYFT 256
Query: 166 NEL---CEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLK 220
+ L C VG+ A +L Q+ E D+ Y ++ ++DAYDL +M +
Sbjct: 257 SLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRR 316
Query: 221 RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQA 280
P+ Y LI C ++ +A+ F M+ + DV T L+ CK K+ +
Sbjct: 317 GFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKC 376
Query: 281 NSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISW 340
V+ MIK + P+ Y ++ + + L M PD+ YN++I
Sbjct: 377 YIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRL 436
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYT 400
C + EA+ L++ M+ + P +T+ I+I G + + A + EM + G+
Sbjct: 437 ACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSV 496
Query: 401 SK 402
S+
Sbjct: 497 SQ 498
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 7/261 (2%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P I + N+L A L + + +G P+ T+LI C + RM A V
Sbjct: 285 PDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKV 344
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
++ + + D T L+ G C G+I DD+ KG ++ + + +
Sbjct: 345 FVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKG--LMPSELTYMHIMVAH 402
Query: 167 ELCEVGETGAAL-QLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPD 225
E E E L + +RQI E H D+ +YN +I+ C+ V +A L+NEM +SP
Sbjct: 403 EKKESFEECLELMEKMRQI-EYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPG 461
Query: 226 VFTYNTLIYGFCAGGQLRKAVGFFNVMKMENI--KPDVSTCDPLIHALCKERKVKQANSV 283
V T+ +I G + G L +A F M + T L++ + K++K++ A V
Sbjct: 462 VDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDV 521
Query: 284 VAAMI-KASVEPNVFIYNTLI 303
+ + K + E NV + I
Sbjct: 522 WSCITSKGACELNVLSWTIWI 542
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 187/414 (45%), Gaps = 30/414 (7%)
Query: 1 MSLFRSRFLSIP--SLFMRYHSHSPRPFSHEAV--NAVSSFHNMLSMR------------ 44
MS F ++ IP S +++ + + ++ E + N ++ N MR
Sbjct: 10 MSNFMRKYRKIPHSSFKTKWNENLKQKYAMEELRSNLLTDSENASVMRTLLSSFQLHNCE 69
Query: 45 PAPPITQFNNILGSLVRMNHYPTAVSLSQQLEL--KGIAPDIATLTILINCFCHLGRMNY 102
P P +F ++ +L + + S+ LE+ K P+ + +I + GR+
Sbjct: 70 PTPQAYRF--VIKTLAKSSQLENISSVLYHLEVSEKFDTPE-SIFRDVIAAYGFSGRIEE 126
Query: 103 AFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYR 162
A V KI P L L+ L R ++ ++ K + V T+
Sbjct: 127 AIEVFFKIPNFRCVPSAYTLNALLLVLVRK---RQSLELVPEILVKACRMGVRLEESTFG 183
Query: 163 FLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDL--YNEML 218
LI+ LC +GE A +L+R + ++ D ++Y+ ++ S+C+ K S +D+ Y E L
Sbjct: 184 ILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHK-DSSCFDVIGYLEDL 242
Query: 219 LK-RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
K R SP + Y ++ GG+ ++ V N MK + ++PD+ ++ + +
Sbjct: 243 RKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDY 302
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIM 337
+A+ + ++ + P+V+ YN I+G C N + A + +M G P+V TYNI+
Sbjct: 303 PKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNIL 362
Query: 338 ISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE 391
I L + + A +L+ M+ + ++ T+ I+I ++ + + A LL E
Sbjct: 363 IKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEE 416
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 101/225 (44%), Gaps = 20/225 (8%)
Query: 73 QQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLN 132
+ L +P + T+++ GR SVL ++ +PD T +++G+ +
Sbjct: 240 EDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIAD 299
Query: 133 GEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE--EHTD 190
+ A D++ G V TY IN LC+ + AL+++ + + +
Sbjct: 300 EDYPKADKLFDELLLLGLAPDV----YTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPN 355
Query: 191 VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGF-------CAGGQLR 243
V YN +IK++ + +S A L+ EM ++ + T++ +I + CA G L
Sbjct: 356 VVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLE 415
Query: 244 KAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
+A FN+ N+ S + +I LC++ + QA ++A ++
Sbjct: 416 EA---FNM----NVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 122/277 (44%), Gaps = 12/277 (4%)
Query: 125 LMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQI 184
LMK GE ++ D++ GF + T+ LI C GE G A Q + Q
Sbjct: 155 LMKIFAECGEYKAMWRLVDEMVQDGFP----TTARTFNLLI---CSCGEAGLAKQAVVQF 207
Query: 185 EEEHTD-----VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAG 239
+ T YN I+ S+ K +Y +ML SPDV TYN L++
Sbjct: 208 MKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRL 267
Query: 240 GQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIY 299
G++ + F+ M + PD T + L+H L K K A + + M + ++P+V Y
Sbjct: 268 GKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHY 327
Query: 300 NTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDL 359
TLIDG + ++ M G PDV Y +MI+ S +D+A +F M +
Sbjct: 328 TTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTV 387
Query: 360 KDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
K P+ TY+ +I G + A LL EM S G
Sbjct: 388 KGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 424
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 14/314 (4%)
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEI----RSAINFHDD 144
+L+ F G + ++ ++++ + P T L+ +C GE ++ + F
Sbjct: 154 LLMKIFAECGEYKAMWRLVDEMVQDGF-PTTARTFNLL--ICSCGEAGLAKQAVVQF--- 207
Query: 145 VKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMC 202
+K+K F ++ + S Y ++N L V + + +Q+ E+ DV YN ++ +
Sbjct: 208 MKSKTFNYRPFKHS--YNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNY 265
Query: 203 EDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVS 262
+ L++EM SPD +TYN L++ G + A+ N MK I P V
Sbjct: 266 RLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVL 325
Query: 263 TCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTM 322
LI L + ++ + M+KA P+V Y +I GY + ++ KA+ + M
Sbjct: 326 HYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREM 385
Query: 323 ATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHY 382
+G P+V TYN MI LC + EA L M+ + P+ YS L+
Sbjct: 386 TVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKL 445
Query: 383 MHAINLLAEMCSNG 396
A ++ EM G
Sbjct: 446 SEARKVIREMVKKG 459
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 6/262 (2%)
Query: 30 AVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTI 89
A AV F + P +N IL SL+ + Y + +Q+ G +PD+ T I
Sbjct: 200 AKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNI 259
Query: 90 LINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKG 149
L+ LG+M+ + ++ + + PD+ L+ L + +A+ + +K G
Sbjct: 260 LLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVG 319
Query: 150 FQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCV 207
+D + Y LI+ L G A L ++ + DV Y +I +
Sbjct: 320 ----IDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGEL 375
Query: 208 SDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPL 267
A +++ EM +K P+VFTYN++I G C G+ R+A M+ P+ L
Sbjct: 376 DKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTL 435
Query: 268 IHALCKERKVKQANSVVAAMIK 289
+ L K K+ +A V+ M+K
Sbjct: 436 VSYLRKAGKLSEARKVIREMVK 457
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 5/221 (2%)
Query: 187 EHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAV 246
HT V Y+ ++K E + L +EM+ T+N LI G ++AV
Sbjct: 146 RHT-VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAV 204
Query: 247 GFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGY 306
F K N +P + + ++++L ++ K V M++ P+V YN L+
Sbjct: 205 VQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTN 264
Query: 307 CLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDA 366
+ +M + L MA G +PD +TYNI++ L N A++ ++M I P
Sbjct: 265 YRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSV 324
Query: 367 ETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKLDAIC 407
Y+ LI+G + L EM G + D +C
Sbjct: 325 LHYTTLIDGLSRAGNLEACKYFLDEMVKAG----CRPDVVC 361
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
+P +N +L L + N A++ ++ GI P + T LI+ G +
Sbjct: 286 SPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKY 345
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
L +++K +PD T ++ G ++GE+ A ++ KG Q+ V TY +I
Sbjct: 346 FLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKG---QLPNV-FTYNSMI 401
Query: 166 NELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLK 220
LC GE A LL+++E + + +Y+T++ + + +S+A + EM+ K
Sbjct: 402 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKK 458
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/173 (17%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
++ + A+++ ++M + P + + ++ L R + ++ G PD+
Sbjct: 302 GNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVC 361
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
T++I + G ++ A + ++ + P+ ++++GLC+ GE R A +++
Sbjct: 362 YTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEME 421
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIK 199
++G V Y L++ L + G+ A +++R++ ++ V + ++K
Sbjct: 422 SRGCNPNF----VVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMK 470
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 165 INELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
+ +LC V +T + +++ + D +N +++++C++K ++DA ++Y+ L + P
Sbjct: 154 VAKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHS-LKHQFQP 212
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
D+ T+N L+ G+ +A FF MK + +KPDV T + LI CK+R++++A ++
Sbjct: 213 DLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLI 269
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
M + P+V Y T+I G LI Q KAR + M G PDV YN I C +
Sbjct: 270 DKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIA 329
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSIL 372
+ +A L M K + P+A TY++
Sbjct: 330 RRLGDADKLVDEMVKKGLSPNATTYNLF 357
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 106/243 (43%), Gaps = 6/243 (2%)
Query: 118 DTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAA 177
DT L++ LC + A N + +K QFQ D T+ L++ E A
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLK---HQFQPD--LQTFNILLSGWKSSEEAEAF 233
Query: 178 LQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFC 237
+ ++ + DV YN++I C+D+ + AY L ++M + +PDV TY T+I G
Sbjct: 234 FEEMKG-KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLG 292
Query: 238 AGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVF 297
GQ KA MK PDV+ + I C R++ A+ +V M+K + PN
Sbjct: 293 LIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNAT 352
Query: 298 IYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYM 357
YN L N + ++ L M P+ + +I +D AM L+ M
Sbjct: 353 TYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 412
Query: 358 DLK 360
+K
Sbjct: 413 VVK 415
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 12/240 (5%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVL-GKI 110
FN +L +L + A ++ L+ + PD+ T IL++ + F + GK
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGWKSSEEAEAFFEEMKGKG 241
Query: 111 LKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCE 170
LK PD +L+ C + EI A D ++ + V +TY +I L
Sbjct: 242 LK----PDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDV----ITYTTVIGGLGL 293
Query: 171 VGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFT 228
+G+ A ++L++++E + DV YN I++ C + + DA L +EM+ K +SP+ T
Sbjct: 294 IGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATT 353
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
YN L ++ + M P+ +C LI + KV A + M+
Sbjct: 354 YNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMV 413
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 168/361 (46%), Gaps = 13/361 (3%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
+ M S+ + FN ++ S + + A+S+ ++ G+ P++ + ++I+ C
Sbjct: 206 YKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACK 265
Query: 97 LGRMNYAFSVLGKILKRA---YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQ 153
G M +A +LGK+ + P+ +++ G C G + A D+ G
Sbjct: 266 TGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSG---- 321
Query: 154 VDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQ--MYNTIIKSMCEDKCVSDAY 211
VD TY L++ G + AL+L ++ + V +YN+I+ + + + A
Sbjct: 322 VDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAM 381
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
+ +M K + D FT ++ G C G +++AV F + + + D+ + L+H
Sbjct: 382 SVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHF 441
Query: 272 CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV 331
+++K+ A+ ++ +M+ + + + TLIDGY ++ +A + M T ++
Sbjct: 442 VRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNL 501
Query: 332 HTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE 391
YN +++ L M A ++ + M++KDI TY+ L+ L + A ++L++
Sbjct: 502 VIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIV----TYNTLLNESLKTGNVEEADDILSK 557
Query: 392 M 392
M
Sbjct: 558 M 558
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 169/410 (41%), Gaps = 77/410 (18%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKG---IAPDIATLTI 89
A+S F+ ML P + FN ++ + A+ L ++ + ++P+ T
Sbjct: 237 ALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNS 296
Query: 90 LINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLM---------------------KG 128
+IN FC GR++ A + G ++K + L+ KG
Sbjct: 297 VINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKG 356
Query: 129 LCLN--------------GEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGET 174
L +N G+I A++ D+ +K Q+DR T ++ LC G
Sbjct: 357 LVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSK--NMQIDRF--TQAIVVRGLCRNGYV 412
Query: 175 GAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL 232
A++ RQI E+ D+ +NT++ DK ++ A + ML++ +S D ++ TL
Sbjct: 413 KEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTL 472
Query: 233 IYGFCAGGQLRKAVGFFNVM----KMENIK---------------------------PDV 261
I G+ G+L +A+ ++ M K N+ D+
Sbjct: 473 IDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDI 532
Query: 262 STCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFI--YNTLIDGYCLINQMTKARFLS 319
T + L++ K V++A+ +++ M K E +V + +N +I+ C KA+ +
Sbjct: 533 VTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVL 592
Query: 320 HTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
M RGV PD TY +I+ ++ + L Y+ L+ + P Y
Sbjct: 593 KFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIY 642
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 170/376 (45%), Gaps = 27/376 (7%)
Query: 86 TLTILINCFCHLGRMNYAFSVLGKILKRAYQ-----PDTTALTTLMKGLCLNGEIRSAIN 140
L+I+ N G VL ++ R+YQ PD +L++ NG+ + A
Sbjct: 113 ALSIMANLMSVEGEKLSPLHVLSGLI-RSYQACGSSPDV--FDSLVRACTQNGDAQGAYE 169
Query: 141 FHDDVKAKGFQFQVDRVSVTYRFL--INELCEVGETGAALQLLRQIEEEHTDVQMYNTII 198
+ +A+GF V ++ L +NE+ + + L +E +V +N +I
Sbjct: 170 VIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVE----NVNTFNLVI 225
Query: 199 KSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN-- 256
S C++ + +A ++ ML + P+V ++N +I G C G +R A+ M M +
Sbjct: 226 YSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGN 285
Query: 257 -IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA 315
+ P+ T + +I+ CK ++ A + M+K+ V+ N Y L+D Y +A
Sbjct: 286 FVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEA 345
Query: 316 RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
L M ++G+ + YN ++ WL ++ AMS+ M+ K+++ D T +I++ G
Sbjct: 346 LRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRG 405
Query: 376 WLNLPHYMHAINLLAEMCSNGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIAS 435
+ A+ ++ + D +C+ + + F+R K+ AD ++ S
Sbjct: 406 LCRNGYVKEAVEFQRQISEKKLVE----DIVCH----NTLMHHFVRDKKLAC-ADQILGS 456
Query: 436 HIVLRNPSFKATGFGT 451
+V + S A FGT
Sbjct: 457 MLV-QGLSLDAISFGT 471
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 153/372 (41%), Gaps = 19/372 (5%)
Query: 19 HSHSPRPFSHEAVNAVSSFHNMLSM------RPAPPITQ----FNNILGSLVRMNHYPTA 68
H HSP A+ V N S+ R P + +N ++G R + A
Sbjct: 185 HWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKA 244
Query: 69 VSLSQQLELKGIAPDIATLTILINCFCHLGRM--NYAFSVLGKILKRAYQPDTTALTTLM 126
L + +G PD+ + LIN G + N A +L + +PD TL+
Sbjct: 245 QELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLL 304
Query: 127 KGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE 186
+ + A+ +D++A Q + TY +I+ G A +L ++E
Sbjct: 305 SACSRDSNLDGAVKVFEDMEAHRCQPDL----WTYNAMISVYGRCGLAAEAERLFMELEL 360
Query: 187 EH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRK 244
+ D YN+++ + ++ ++Y +M D TYNT+I+ + GQL
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL 420
Query: 245 AVGFFNVMK-MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLI 303
A+ + MK + PD T LI +L K + +A ++++ M+ ++P + Y+ LI
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 304 DGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIK 363
GY + +A M G PD Y++M+ L N +A L+ M
Sbjct: 481 CGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHT 540
Query: 364 PDAETYSILIEG 375
P Y ++I G
Sbjct: 541 PSYTLYELMILG 552
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/427 (19%), Positives = 189/427 (44%), Gaps = 21/427 (4%)
Query: 27 SHEAVNAVSS--FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDI 84
+H+ VN + FH S P+ + +I+ + + + A S+ L G PD+
Sbjct: 735 AHQVVNQAETKGFHFACS-----PM--YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDL 787
Query: 85 ATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDD 144
T L++ + G A ++ +++ P ++ L+ LC++G + ++
Sbjct: 788 KTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEE 847
Query: 145 VKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMC 202
++ GF+ + + S+ +++ G ++ ++ +++Y +I+ +C
Sbjct: 848 LQDMGFK--ISKSSIL--LMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLC 903
Query: 203 EDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVS 262
+ K V DA + +EM ++ +N+++ + A +K V + +K ++PD +
Sbjct: 904 KGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDET 963
Query: 263 TCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTM 322
T + LI C++R+ ++ ++ M ++P + Y +LI + + +A L +
Sbjct: 964 TYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL 1023
Query: 323 ATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHY 382
++G+ D Y+ M+ S +A L M I+P T +L+ + + +
Sbjct: 1024 LSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNP 1083
Query: 383 MHAINLLA-----EMCSNGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHI 437
A +L+ E+ + Y+S +DA +++ IE+ + K+ G + D I +
Sbjct: 1084 QEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCF 1143
Query: 438 VLRNPSF 444
V R SF
Sbjct: 1144 V-RAASF 1149
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 146/371 (39%), Gaps = 50/371 (13%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
+P ILG L R N AV + + E + + ++ + G+ + A
Sbjct: 188 SPNARMVAAILGVLGRWNQESLAVEIFTRAE-PTVGDRVQVYNAMMGVYSRSGKFSKAQE 246
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRS--AINFHDDVKAKGFQFQVDRVSVTYRF 163
++ + +R PD + TL+ +G + A+ D V+ G +
Sbjct: 247 LVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLR------------ 294
Query: 164 LINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
D YNT++ + D + A ++ +M R
Sbjct: 295 -------------------------PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQ 329
Query: 224 PDVFTYNTLI--YGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
PD++TYN +I YG C G +A F ++++ PD T + L++A +ER ++
Sbjct: 330 PDLWTYNAMISVYGRC--GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVK 387
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTM-ATRGVTPDVHTYNIMISW 340
V M K + YNT+I Y Q+ A L M G PD TY ++I
Sbjct: 388 EVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDS 447
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG---- 396
L +N EA +L M IKP +TYS LI G+ A + + M +G
Sbjct: 448 LGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPD 507
Query: 397 -IAYTSKLDAI 406
+AY+ LD +
Sbjct: 508 NLAYSVMLDVL 518
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 5/278 (1%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
AV F +M + R P + +N ++ R A L +LELKG PD T L+
Sbjct: 315 GAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLL 374
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
F V ++ K + D T++ G++ A+ + D+K +
Sbjct: 375 YAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGR 434
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSD 209
+ ++TY LI+ L + T A L+ ++ + +Q Y+ +I + +
Sbjct: 435 ---NPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREE 491
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A D ++ ML PD Y+ ++ G + RKA G + M + P + + +I
Sbjct: 492 AEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMIL 551
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC 307
L KE + + M + + I + L+ G C
Sbjct: 552 GLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGEC 589
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 142/311 (45%), Gaps = 16/311 (5%)
Query: 68 AVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMK 127
AV + ++ + GI D+ L+ C + +A ++ +R + D A+ ++
Sbjct: 197 AVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCS-RRREFGCDIKAMNMILN 255
Query: 128 GLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE- 186
G C+ G + A F D+ A + V V+Y +IN L + G+ G A++L R + +
Sbjct: 256 GWCVLGNVHEAKRFWKDIIASKCRPDV----VSYGTMINALTKKGKLGKAMELYRAMWDT 311
Query: 187 -EHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKA 245
+ DV++ N +I ++C K + +A +++ E+ K P+V TYN+L+ C + K
Sbjct: 312 RRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKV 371
Query: 246 VGFFNVMKMENIKPDVSTCDP----LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNT 301
M+++ +C P + L ++ K + V+ M K E +YN
Sbjct: 372 WELVEEMELKG-----GSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNL 426
Query: 302 LIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKD 361
+ Y ++ K R + M G+ PD TY I I L T + EA+S F M K
Sbjct: 427 MFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 486
Query: 362 IKPDAETYSIL 372
+ P+ T +L
Sbjct: 487 MVPEPRTEMLL 497
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 120/305 (39%), Gaps = 35/305 (11%)
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLL-RQIEEEHTDVQMYNTIIKSMCEDKCVSD 209
+F +D V + L+ LC A L + E D++ N I+ C V +
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHE 265
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A + +++ + PDV +Y T+I G+L KA+ + M PDV C+ +I
Sbjct: 266 AKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVID 325
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG--V 327
ALC ++++ +A V + + +PNV YN+L+ C I + K L M +G
Sbjct: 326 ALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSC 385
Query: 328 TPDVHT--------------------------------YNIMISWLCTSNMMDEAMSLFH 355
+P+ T YN+M + ++ ++
Sbjct: 386 SPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWS 445
Query: 356 YMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKLDAICNDYNFDDE 415
M+ + PD TY+I I G A++ EM S G+ + + + N
Sbjct: 446 EMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLLNQNKTKPR 505
Query: 416 IEKFM 420
+E M
Sbjct: 506 VEDKM 510
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 115/248 (46%), Gaps = 10/248 (4%)
Query: 133 GEIRSAINFHD--DVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTD 190
G++R FH D +K F ++ TY L+N + A+ + + +E D
Sbjct: 154 GKMRRFEEFHQVFDEMSKRDGFVNEK---TYEVLLNRYAAAHKVDEAVGVFERRKEFGID 210
Query: 191 VQM--YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGF 248
+ ++ ++ +C K V A L+ + D+ N ++ G+C G + +A F
Sbjct: 211 DDLVAFHGLLMWLCRYKHVEFAETLFCSRR-REFGCDIKAMNMILNGWCVLGNVHEAKRF 269
Query: 249 FNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCL 308
+ + +PDV + +I+AL K+ K+ +A + AM P+V I N +ID C
Sbjct: 270 WKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCF 329
Query: 309 INQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLK--DIKPDA 366
++ +A + ++ +G P+V TYN ++ LC ++ L M+LK P+
Sbjct: 330 KKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPND 389
Query: 367 ETYSILIE 374
T+S L++
Sbjct: 390 VTFSYLLK 397
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 107/275 (38%), Gaps = 44/275 (16%)
Query: 193 MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
+YN I+ + + + + + +++EM + + TY L+ + A ++ +AVG F
Sbjct: 145 LYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERR 204
Query: 253 KMENIKPDVSTCDPLIHALCKERKVKQANSV-----------VAAM-------------- 287
K I D+ L+ LC+ + V+ A ++ + AM
Sbjct: 205 KEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVH 264
Query: 288 ---------IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMI 338
I + P+V Y T+I+ ++ KA L M PDV N +I
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 339 SWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA 398
LC + EA+ +F + K P+ TY+ L++ + L+ EM G +
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGS 384
Query: 399 YTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLI 433
+ ND F ++Y + D D ++
Sbjct: 385 CSP------NDVTFS----YLLKYSQRSKDVDIVL 409
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 151/335 (45%), Gaps = 9/335 (2%)
Query: 60 VRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDT 119
R A+ ++E G + + +++ + A V K+ K+ ++PD
Sbjct: 173 ARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDI 232
Query: 120 TALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQ 179
+ T L++G + + ++K +GF+ V V Y +IN C+ + A++
Sbjct: 233 KSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDV----VAYGIIINAHCKAKKYEEAIR 288
Query: 180 LLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFC 237
++E+ + ++ ++I + +K ++DA + + + TYN L+ +C
Sbjct: 289 FFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYC 348
Query: 238 AGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVF 297
++ A + M+++ + P+ T D ++H L + ++ K+A V M S EP V
Sbjct: 349 WSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVS 405
Query: 298 IYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYM 357
Y ++ +C ++ A + M +GV P +H ++ +I+ LC N +DEA F+ M
Sbjct: 406 TYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEM 465
Query: 358 DLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
I+P +S L + L+ +L+ +M
Sbjct: 466 LDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 140/322 (43%), Gaps = 15/322 (4%)
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
++ ++ T+ L++ L + + + DD+KAK + T+ +
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-----TFALISRRYARA 175
Query: 172 GETGAALQLLRQIEE-----EHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
+ A+ ++EE E +D +N ++ ++ + + V DA ++++M KR PD+
Sbjct: 176 RKVKEAIGAFHKMEEFGFKMESSD---FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDI 232
Query: 227 FTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAA 286
+Y L+ G+ L + MK E +PDV +I+A CK +K ++A
Sbjct: 233 KSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNE 292
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNM 346
M + + +P+ I+ +LI+G ++ A + G + TYN ++ C S
Sbjct: 293 MEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQR 352
Query: 347 MDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM-CSNGIA-YTSKLD 404
M++A M LK + P+A TY I++ + + A + M C ++ Y +
Sbjct: 353 MEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVR 412
Query: 405 AICNDYNFDDEIEKFMRYKETG 426
CN D I+ + K G
Sbjct: 413 MFCNKERLDMAIKIWDEMKGKG 434
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 145/356 (40%), Gaps = 22/356 (6%)
Query: 50 TQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGK 109
+ +N ++ SL ++ + SL ++ K + T ++ + ++ A K
Sbjct: 129 SNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSK-ETFALISRRYARARKVKEAIGAFHK 187
Query: 110 ILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELC 169
+ + ++ +++ ++ L + + A D +K K F+ + +Y L+
Sbjct: 188 MEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIK----SYTILLEGW- 242
Query: 170 EVGETGAALQLLR------QIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKR 221
G L LLR ++++E DV Y II + C+ K +A +NEM +
Sbjct: 243 -----GQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRN 297
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
P + +LI G + +L A+ FF K + T + L+ A C ++++ A
Sbjct: 298 CKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAY 357
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
V M V PN Y+ ++ + + +A + TM+ P V TY IM+
Sbjct: 358 KTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PTVSTYEIMVRMF 414
Query: 342 CTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
C +D A+ ++ M K + P +S LI + A EM GI
Sbjct: 415 CNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 109/244 (44%), Gaps = 10/244 (4%)
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRI-SPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
YN +I+S+ + K + L ++M K++ S + F + Y ++++A+G F+ M
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYA--RARKVKEAIGAFHKM 188
Query: 253 KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQM 312
+ K + S + ++ L K R V A V M K EP++ Y L++G+ +
Sbjct: 189 EEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNL 248
Query: 313 TKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSIL 372
+ ++ M G PDV Y I+I+ C + +EA+ F+ M+ ++ KP + L
Sbjct: 249 LRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSL 308
Query: 373 IEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKF--MRYKET 425
I G + A+ S+G Y + + A C +D + MR K
Sbjct: 309 INGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGV 368
Query: 426 GGDA 429
G +A
Sbjct: 369 GPNA 372
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 115/292 (39%), Gaps = 32/292 (10%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S +A F M R P I + +L + + ++++++ +G PD+
Sbjct: 210 SRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVA 269
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
I+IN C + A ++ +R +P +L+ GL ++ A+ F + K
Sbjct: 270 YGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSK 329
Query: 147 AKGFQFQ-----------------------VDRVSV--------TYRFLINELCEVGETG 175
+ GF + VD + + TY +++ L + +
Sbjct: 330 SSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSK 389
Query: 176 AALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYG 235
A ++ + + E T V Y +++ C + + A +++EM K + P + +++LI
Sbjct: 390 EAYEVYQTMSCEPT-VSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITA 448
Query: 236 FCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
C +L +A +FN M I+P L L E + + +V M
Sbjct: 449 LCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 156/385 (40%), Gaps = 42/385 (10%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKG-IAPDIATLTIL 90
+A+S F ++ F+ +L +V+ + A + ++ + I L +L
Sbjct: 99 DAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLL 158
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
+ C + R + A V ++ + PD + LMKG CL G++ A + + +
Sbjct: 159 MKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRIS 218
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQI---------------EEEHTDVQ--- 192
Q V YR L++ LC+ GE A+++L +I E H +
Sbjct: 219 QKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG 278
Query: 193 -------MYNTIIKSM--CEDKCVSDAYDLYNE------------MLLKRISPDVFTYNT 231
+ T+I+ C D + A DL+ E M K P F Y
Sbjct: 279 IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGA 338
Query: 232 LIYGFCAGGQLRKAVGFFNVMKME-NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK- 289
+ C G+L++AV N M+ + P V + LI LC + K +A + M K
Sbjct: 339 KVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQ 398
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
S N Y TL+DG C Q +A + M + P V TY++MI LC + E
Sbjct: 399 VSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYE 458
Query: 350 AMSLFHYMDLKDIKPDAETYSILIE 374
A+ M +D+ P++ + L E
Sbjct: 459 AVMWLEEMVSQDMVPESSVWKALAE 483
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 140/335 (41%), Gaps = 41/335 (12%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYA----F 104
IT N ++ L ++N A + Q++ +G PD + IL+ FC G++ A +
Sbjct: 152 ITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLY 211
Query: 105 SVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF------------ 152
S+ +I ++ D L+ LC GE+ AI + KG +
Sbjct: 212 SMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH 271
Query: 153 ------QVDRVSV---------------TYRFLINELCEVGETGAALQLLRQIEEEHTDV 191
++RV +Y + +L E G+ ++L + + +
Sbjct: 272 WESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEP 331
Query: 192 Q--MYNTIIKSMCEDKCVSDAYDLYN-EMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGF 248
+Y +K++C + +A + N EM+ P V YN LI G C G+ +AVG+
Sbjct: 332 TPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGY 391
Query: 249 FNVM-KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC 307
M K + + T L+ LC++ + +A+ V+ M+ S P V Y+ +I G C
Sbjct: 392 LKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC 451
Query: 308 LINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC 342
+++ +A M ++ + P+ + + +C
Sbjct: 452 DMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 146/370 (39%), Gaps = 58/370 (15%)
Query: 97 LGRMNYAFS---VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQ 153
LG+ N V+ ++ + + + + ++++ G + AI+ + +F
Sbjct: 56 LGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSL----HEFN 111
Query: 154 VDRVSVTYRFLINELCEVGETGAALQLLRQI---EEEHTDVQMYNTIIKSMCEDKCVSDA 210
S+++ L+ E+ + E AA + R+ E ++ + N ++K +C+ A
Sbjct: 112 CVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLA 171
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAV----GFFNVMKMENIKPDVSTCDP 266
++ EM + PD +Y L+ GFC G+L +A F + + D+
Sbjct: 172 SQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRI 231
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYN-----------------------TLI 303
L+ ALC +V A ++ +++ ++ Y+ TLI
Sbjct: 232 LLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLI 291
Query: 304 DGY--CLIN------------QMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
G CL + ++ + + M ++G P Y + LC + + E
Sbjct: 292 RGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKE 351
Query: 350 AMSLFHY-MDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM------CSNGIAYTSK 402
A+S+ + M P Y++LI+G + M A+ L +M +N Y +
Sbjct: 352 AVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTL 411
Query: 403 LDAICNDYNF 412
+D +C D F
Sbjct: 412 VDGLCRDGQF 421
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 156/385 (40%), Gaps = 42/385 (10%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKG-IAPDIATLTIL 90
+A+S F ++ F+ +L +V+ + A + ++ + I L +L
Sbjct: 99 DAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLL 158
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
+ C + R + A V ++ + PD + LMKG CL G++ A + + +
Sbjct: 159 MKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRIS 218
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQI---------------EEEHTDVQ--- 192
Q V YR L++ LC+ GE A+++L +I E H +
Sbjct: 219 QKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG 278
Query: 193 -------MYNTIIKSM--CEDKCVSDAYDLYNE------------MLLKRISPDVFTYNT 231
+ T+I+ C D + A DL+ E M K P F Y
Sbjct: 279 IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGA 338
Query: 232 LIYGFCAGGQLRKAVGFFNVMKME-NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK- 289
+ C G+L++AV N M+ + P V + LI LC + K +A + M K
Sbjct: 339 KVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQ 398
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
S N Y TL+DG C Q +A + M + P V TY++MI LC + E
Sbjct: 399 VSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYE 458
Query: 350 AMSLFHYMDLKDIKPDAETYSILIE 374
A+ M +D+ P++ + L E
Sbjct: 459 AVMWLEEMVSQDMVPESSVWKALAE 483
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 140/335 (41%), Gaps = 41/335 (12%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYA----F 104
IT N ++ L ++N A + Q++ +G PD + IL+ FC G++ A +
Sbjct: 152 ITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLY 211
Query: 105 SVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF------------ 152
S+ +I ++ D L+ LC GE+ AI + KG +
Sbjct: 212 SMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH 271
Query: 153 ------QVDRVSV---------------TYRFLINELCEVGETGAALQLLRQIEEEHTDV 191
++RV +Y + +L E G+ ++L + + +
Sbjct: 272 WESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEP 331
Query: 192 Q--MYNTIIKSMCEDKCVSDAYDLYN-EMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGF 248
+Y +K++C + +A + N EM+ P V YN LI G C G+ +AVG+
Sbjct: 332 TPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGY 391
Query: 249 FNVM-KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC 307
M K + + T L+ LC++ + +A+ V+ M+ S P V Y+ +I G C
Sbjct: 392 LKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC 451
Query: 308 LINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC 342
+++ +A M ++ + P+ + + +C
Sbjct: 452 DMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 146/370 (39%), Gaps = 58/370 (15%)
Query: 97 LGRMNYAFS---VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQ 153
LG+ N V+ ++ + + + + ++++ G + AI+ + +F
Sbjct: 56 LGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSL----HEFN 111
Query: 154 VDRVSVTYRFLINELCEVGETGAALQLLRQI---EEEHTDVQMYNTIIKSMCEDKCVSDA 210
S+++ L+ E+ + E AA + R+ E ++ + N ++K +C+ A
Sbjct: 112 CVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLA 171
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAV----GFFNVMKMENIKPDVSTCDP 266
++ EM + PD +Y L+ GFC G+L +A F + + D+
Sbjct: 172 SQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRI 231
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYN-----------------------TLI 303
L+ ALC +V A ++ +++ ++ Y+ TLI
Sbjct: 232 LLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLI 291
Query: 304 DGY--CLIN------------QMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
G CL + ++ + + M ++G P Y + LC + + E
Sbjct: 292 RGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKE 351
Query: 350 AMSLFHY-MDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM------CSNGIAYTSK 402
A+S+ + M P Y++LI+G + M A+ L +M +N Y +
Sbjct: 352 AVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTL 411
Query: 403 LDAICNDYNF 412
+D +C D F
Sbjct: 412 VDGLCRDGQF 421
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 152/385 (39%), Gaps = 42/385 (10%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S + A + F + P +N +L V+ A S+ ++E +G++PD T
Sbjct: 317 SGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHT 376
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
++LI+ + + GR A VL ++ QP++ + L+ G GE + ++K
Sbjct: 377 YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKC 206
+ G + D Q YN +I + + C
Sbjct: 437 SIGVK-------------------------------------PDRQFYNVVIDTFGKFNC 459
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+ A ++ ML + I PD T+NTLI C G+ A F M+ P +T +
Sbjct: 460 LDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNI 519
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
+I++ + + ++ M + PNV + TL+D Y + A M + G
Sbjct: 520 MINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 579
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
+ P YN +I+ + ++A++ F M +KP + LI + A
Sbjct: 580 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 639
Query: 387 NLLAEMCSNG-----IAYTSKLDAI 406
+L M NG + YT+ + A+
Sbjct: 640 AVLQYMKENGVKPDVVTYTTLMKAL 664
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 148/359 (41%), Gaps = 38/359 (10%)
Query: 53 NNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILK 112
N+I+ + A+ L + G++ ATL +I+ GR A ++ ++ +
Sbjct: 273 NDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ 332
Query: 113 RAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVG 172
+P T A L+KG G ++ A + +++ +G V TY LI+ G
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG----VSPDEHTYSLLIDAYVNAG 388
Query: 173 ETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL 232
+A +L+++E DVQ P+ F ++ L
Sbjct: 389 RWESARIVLKEMEA--GDVQ-------------------------------PNSFVFSRL 415
Query: 233 IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASV 292
+ GF G+ +K MK +KPD + +I K + A + M+ +
Sbjct: 416 LAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGI 475
Query: 293 EPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMS 352
EP+ +NTLID +C + A + M RG P TYNIMI+ D+
Sbjct: 476 EPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKR 535
Query: 353 LFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKL-DAICNDY 410
L M + I P+ T++ L++ + + AI L EM S G+ +S + +A+ N Y
Sbjct: 536 LLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAY 594
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 150/344 (43%), Gaps = 18/344 (5%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
++ ++ +L R A LSQ+ L + T LI + A +++ K+
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQKQTLTPL-----TYNALIGACARNNDIEKALNLIAKMR 224
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSA--INFHDDVKAKGFQFQVDRVSVTYRFLINELC 169
+ YQ D + +++ L + +I S + + +++ + V V+ +I
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVND----IIMGFA 280
Query: 170 EVGETGAALQLLRQIEEEHTDVQMYN--TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVF 227
+ G+ ALQLL + + +II ++ + +A L+ E+ I P
Sbjct: 281 KSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTR 340
Query: 228 TYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
YN L+ G+ G L+ A + M+ + PD T LI A + + A V+ M
Sbjct: 341 AYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEM 400
Query: 288 IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMM 347
V+PN F+++ L+ G+ + K + M + GV PD YN++I N +
Sbjct: 401 EAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCL 460
Query: 348 DEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE 391
D AM+ F M + I+PD T++ LI+ H H +++AE
Sbjct: 461 DHAMTTFDRMLSEGIEPDRVTWNTLIDC-----HCKHGRHIVAE 499
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 111/243 (45%), Gaps = 4/243 (1%)
Query: 159 VTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDA--YDLY 214
+TY LI + AL L+ ++ ++ +D Y+ +I+S+ + LY
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
E+ ++ DV N +I GF G KA+ + + + +T +I AL
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY 334
+ +A ++ + ++ ++P YN L+ GY + A + M RGV+PD HTY
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 335 NIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCS 394
+++I + + A + M+ D++P++ +S L+ G+ + + +L EM S
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437
Query: 395 NGI 397
G+
Sbjct: 438 IGV 440
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 167/394 (42%), Gaps = 18/394 (4%)
Query: 30 AVNAVSSFHNM----------LSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKG 79
+VN++ F N+ + + P + +N ++ R A ++++++ G
Sbjct: 19 SVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAG 78
Query: 80 IAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAI 139
I PD+ T LI+ +N + ++L PD + TLM G A
Sbjct: 79 IEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAF 138
Query: 140 N-FHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE-HTDVQMYNTI 197
H+D+ G +D TY L++ LC+ G T A++L + ++ ++ YN +
Sbjct: 139 KILHEDIHLAGLVPGID----TYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNIL 194
Query: 198 IKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENI 257
I +C+ + V + E+ +P+ TY T++ + ++ K + F MK E
Sbjct: 195 INGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGY 254
Query: 258 KPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEP-NVFIYNTLIDGYCLINQMTKAR 316
D ++ AL K + ++A + ++++ ++ YNTL++ Y +
Sbjct: 255 TFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVD 314
Query: 317 FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
L + +G+ PD +T+ I+++ L A + ++P T + LI+G
Sbjct: 315 DLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGL 374
Query: 377 LNLPHYMHAINLLAEM-CSNGIAYTSKLDAICND 409
H A+ L A M + YTS + +C D
Sbjct: 375 CKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKD 408
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 118/241 (48%), Gaps = 7/241 (2%)
Query: 192 QMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNV 251
++ N + S+C+ + + A L + + + PDV TYNTLI G+ + +A
Sbjct: 14 KLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRR 73
Query: 252 MKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQ 311
M+ I+PDV+T + LI K + + + M+ + + P+++ YNTL+ Y + +
Sbjct: 74 MREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGR 133
Query: 312 MTKA-RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
+A + L + G+ P + TYNI++ LC S D A+ LF ++ + +KP+ TY+
Sbjct: 134 HGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYN 192
Query: 371 ILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYKET 425
ILI G ++ E+ +G + YT+ L + ++ F++ K+
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 426 G 426
G
Sbjct: 253 G 253
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 146/382 (38%), Gaps = 78/382 (20%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G+ PD+ T LI + ++ A++V ++ + +PD T +L+ G N +
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTII 198
+ D++ G + +Y L++ ++G G A ++L H D+ + +
Sbjct: 103 LQLFDEMLHSGLSPDM----WSYNTLMSCYFKLGRHGEAFKIL------HEDIHLAGLV- 151
Query: 199 KSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
P + TYN L+ C G A+ F +K +K
Sbjct: 152 -------------------------PGIDTYNILLDALCKSGHTDNAIELFKHLK-SRVK 185
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFL 318
P++ T + LI+ LCK R+V + ++ + K+ PN Y T++ Y ++ K L
Sbjct: 186 PELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQL 245
Query: 319 SHTMATRGVT------------------------------------PDVHTYNIMISWLC 342
M G T D+ +YN +++
Sbjct: 246 FLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYF 305
Query: 343 TSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----I 397
+D L +++K +KPD T++I++ G LN+ + A LA + G +
Sbjct: 306 KDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVV 365
Query: 398 AYTSKLDAICNDYNFDDEIEKF 419
+D +C + D + F
Sbjct: 366 TCNCLIDGLCKAGHVDRAMRLF 387
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 128/297 (43%), Gaps = 15/297 (5%)
Query: 131 LNGEIRSAINFHDDVKAK-----GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIE 185
LN + S F + +A+ G + V +TY LI A + R++
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 186 EE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLR 243
E DV YN++I ++ ++ L++EML +SPD+++YNTL+ + G+
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHG 135
Query: 244 KAVGFFNV-MKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTL 302
+A + + + + P + T + L+ ALCK A + + K+ V+P + YN L
Sbjct: 136 EAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNIL 194
Query: 303 IDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDI 362
I+G C ++ ++ + G TP+ TY M+ + +++ + LF M +
Sbjct: 195 INGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGY 254
Query: 363 KPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG------IAYTSKLDAICNDYNFD 413
D ++ + A + E+ +G ++Y + L+ D N D
Sbjct: 255 TFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLD 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 117/306 (38%), Gaps = 48/306 (15%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
NA+ F ++ S R P + +N ++ L + + + ++L+ G P+ T T ++
Sbjct: 172 NAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTML 230
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGL-----------CLNGEIRSAIN 140
+ R+ + K+ K Y D A ++ L C++ +RS
Sbjct: 231 KMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTR 290
Query: 141 FHD-------------------------DVKAKGFQFQVDRVSVTYRFLINELCEVGETG 175
D +++ KG + T+ ++N L +G TG
Sbjct: 291 SQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPD----DYTHTIIVNGLLNIGNTG 346
Query: 176 AALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLI 233
A + L I E V N +I +C+ V A L+ M ++ D FTY +++
Sbjct: 347 GAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVV 402
Query: 234 YGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVE 293
+ C G+L A + +K S ++ + +E QA IKA++E
Sbjct: 403 HNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGI-RETVSYQAARKTHIKIKAAIE 461
Query: 294 PNVFIY 299
N +Y
Sbjct: 462 CNTLMY 467
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 27/297 (9%)
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNT-----IIKSMCEDKC 206
F D +T R + L + + LRQ+ + T ++K + E+
Sbjct: 121 FGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGF 180
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK--PDVSTC 264
V +A + M PDV+ YNT+I C G +KA + M++ + PD T
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTY 240
Query: 265 DPLIHALCK-----------ERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
LI + C+ R++ +AN + M+ P+V YN LIDG C N++
Sbjct: 241 TILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIG 300
Query: 314 KARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYM-DLKDIKPDAETYSIL 372
+A L M T+G P+ TYN I + +N ++ A+ + M L P + TY+ L
Sbjct: 301 RALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPL 360
Query: 373 IEGWLNLPHYMHAINLLAEMCSNGIA---YTSKL--DAICND---YNFDDEIEKFMR 421
I + A +L+ EM G+ YT KL DA+ ++ D+E+ K MR
Sbjct: 361 IHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMR 417
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 109/235 (46%), Gaps = 16/235 (6%)
Query: 85 ATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDD 144
A++T L+ C G + A + ++ + +PD A T++ LC G + A D
Sbjct: 166 ASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQ 225
Query: 145 VKAKGFQFQVDRVSVTYRFLINELCEVG-ETGAALQLLRQIEEEHT------------DV 191
++ GF++ D + TY LI+ C G +TG + R++ E + DV
Sbjct: 226 MQLPGFRYPPD--TYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDV 283
Query: 192 QMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNV 251
YN +I C+ + A +L+ +M K P+ TYN+ I + ++ A+
Sbjct: 284 VTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRT 343
Query: 252 M-KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDG 305
M K+ + P ST PLIHAL + R+ +A +V M++A + P + Y + D
Sbjct: 344 MKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDA 398
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 20/225 (8%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGI--APDIATLTI 89
A+++F+ M P + +N I+ +L R+ ++ A L Q++L G PD T TI
Sbjct: 183 EALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTI 242
Query: 90 LINCFCHLG-----------RMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
LI+ +C G RM A + ++L R + PD L+ G C I A
Sbjct: 243 LISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRA 302
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDV---QMYN 195
+ +D+K KG VTY I E A++++R +++ V Y
Sbjct: 303 LELFEDMKTKGCVPN----QVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYT 358
Query: 196 TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGG 240
+I ++ E + ++A DL EM+ + P +TY + + G
Sbjct: 359 PLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 1/180 (0%)
Query: 198 IKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME-N 256
++S+CE V +A DL E+ K PD +TYN L+ C L F + M+ + +
Sbjct: 166 VRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFD 225
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKAR 316
+KPD+ + LI +C + +++A +V+ + A +P+ F+YNT++ G+C +++ ++A
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 317 FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
+ M GV PD TYN +I L + ++EA M +PD TY+ L+ G
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 109/231 (47%), Gaps = 9/231 (3%)
Query: 82 PDIATLTILINCFCHL--GRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAI 139
P +T IL++ C ++ VL ++ +PD ++ LC G + A
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 140 NFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE---HTDVQMYNT 196
+ ++ K + TY FL+ LC+ + + + ++ ++ D+ +
Sbjct: 180 DLMKELTEK----HSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN 256
+I ++C K + +A L +++ PD F YNT++ GFC + +AVG + MK E
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC 307
++PD T + LI L K +V++A + M+ A EP+ Y +L++G C
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 5/198 (2%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G+ PD T I + C GR++ A ++ ++ ++ PDT L+K LC ++
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNT 196
F D+++ F + D VS T LI+ +C A+ L+ ++ D +YNT
Sbjct: 214 YEFVDEMR-DDFDVKPDLVSFT--ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNT 270
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN 256
I+K C S+A +Y +M + + PD TYNTLI+G G++ +A + M
Sbjct: 271 IMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG 330
Query: 257 IKPDVSTCDPLIHALCKE 274
+PD +T L++ +C++
Sbjct: 331 YEPDTATYTSLMNGMCRK 348
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 3/187 (1%)
Query: 159 VTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNE 216
VT + LCE G A L++++ E+H+ D YN ++K +C+ K + Y+ +E
Sbjct: 160 VTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDE 219
Query: 217 MLLK-RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKER 275
M + PD+ ++ LI C LR+A+ + + KPD + ++ C
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 276 KVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYN 335
K +A V M + VEP+ YNTLI G ++ +AR TM G PD TY
Sbjct: 280 KGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYT 339
Query: 336 IMISWLC 342
+++ +C
Sbjct: 340 SLMNGMC 346
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 94/213 (44%), Gaps = 5/213 (2%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKR--ISPDVFTYNTLIYGFCAG--GQLRKA 245
D++ +N++++S V+D L+ +L + P T+ L+ C +
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNV 143
Query: 246 VGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDG 305
N+M ++PD T D + +LC+ +V +A ++ + + P+ + YN L+
Sbjct: 144 HRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKH 203
Query: 306 YCLINQMTKA-RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKP 364
C + F+ V PD+ ++ I+I +C S + EAM L + KP
Sbjct: 204 LCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 365 DAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
D Y+ +++G+ L A+ + +M G+
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 131/300 (43%), Gaps = 9/300 (3%)
Query: 81 APDIATLTILINCFCHLGRMNYA---FSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRS 137
A ++ L +L++ C G + A +G + + P L+ G + +++
Sbjct: 209 ATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQ 268
Query: 138 AINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIE--EEHTDVQMYN 195
A +++KA V VTY LI C + A+++L +++ E + ++N
Sbjct: 269 AEKLWEEMKA----MNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFN 324
Query: 196 TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME 255
II + E +S+A + + P + TYN+L+ FC G L A +M
Sbjct: 325 PIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTR 384
Query: 256 NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA 315
+ P +T + K K ++ ++ +I+A P+ Y+ ++ C +++ A
Sbjct: 385 GVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLA 444
Query: 316 RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
++ M RG+ PD+ T ++I LC M++EA F + I P T+ ++ G
Sbjct: 445 MQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNG 504
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 105/239 (43%), Gaps = 5/239 (2%)
Query: 164 LINELCEVGETGAALQLLRQI-----EEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEML 218
L++ LC+ G A L +I V+++N ++ + + A L+ EM
Sbjct: 218 LLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMK 277
Query: 219 LKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVK 278
+ P V TY TLI G+C +++ A+ MKM ++ + +P+I L + ++
Sbjct: 278 AMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLS 337
Query: 279 QANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMI 338
+A ++ P + YN+L+ +C + A + M TRGV P TYN
Sbjct: 338 EALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFF 397
Query: 339 SWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
+ N +E M+L+ + PD TY ++++ A+ + EM + GI
Sbjct: 398 KYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGI 456
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 147/404 (36%), Gaps = 69/404 (17%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + FN +L R A L ++++ + P + T LI +C + R+ A V
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
L ++ + + ++ GL G + A+ + RF +
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMME------------------RFFV- 348
Query: 167 ELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
CE G T + YN+++K+ C+ + A + M+ + + P
Sbjct: 349 --CESGPT----------------IVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTT 390
Query: 227 FTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAA 286
TYN F + + + + + PD T ++ LC++ K+ A V
Sbjct: 391 TTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKE 450
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNM 346
M ++P++ LI C + + +A RG+ P T+ ++ + L + M
Sbjct: 451 MKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGM 510
Query: 347 MDEAM-------SLFH-------YMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
D A SL H Y + D PD + ++ H A++ + +
Sbjct: 511 SDMAKRLSSLMSSLPHSKKLPNTYREAVDAPPDKDRRKSIL-------HRAEAMSDVLKG 563
Query: 393 CSNGIAYT----SKLDAICNDYNFDDEIEKFMRYKETGGDA-DF 431
C N S A+ D N D+I E GDA DF
Sbjct: 564 CRNPRKLVKMRGSHKKAVGEDINLIDDI------NERNGDAGDF 601
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 172/391 (43%), Gaps = 18/391 (4%)
Query: 13 SLFMRYHSHSPRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLS 72
SLF+ H R H+ V + + +++ R P + + L L+ V+LS
Sbjct: 125 SLFLNLMRHFSRSDLHDKVMEMFNLIQVIA-RVKPSLNAISTCLNLLID----SGEVNLS 179
Query: 73 QQLELK-----GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQ-PDTTALTTLM 126
++L L G+ P+ IL+ C G +N+AF V+ ++ + P++ +TLM
Sbjct: 180 RKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLM 239
Query: 127 KGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE 186
L + + A+ +D+ +K + VT+ +IN C GE A ++L +++
Sbjct: 240 DCLFAHSRSKEAVELFEDMISKE---GISPDPVTFNVMINGFCRAGEVERAKKILDFMKK 296
Query: 187 EHTDVQMYN--TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRK 244
+ +YN ++ C+ + +A ++E+ + D Y TL+ FC G+ +
Sbjct: 297 NGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDE 356
Query: 245 AVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLID 304
A+ MK + D T + ++ L E + ++A ++ V N Y +++
Sbjct: 357 AMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILN 416
Query: 305 GYCLINQMTKA-RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIK 363
C ++ KA +FLS M+ RG+ P T+N ++ LC S + + + +
Sbjct: 417 ALCCNGELEKAVKFLS-VMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLI 475
Query: 364 PDAETYSILIEGWLNLPHYMHAINLLAEMCS 394
P +++ ++E +H LL + S
Sbjct: 476 PGPKSWGAVVESICKERKLVHVFELLDSLVS 506
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 135/268 (50%), Gaps = 14/268 (5%)
Query: 165 INELCEVGETGAALQLLRQIEEE---HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKR 221
+N L + GE + +LL + + ++N ++K C++ ++ A+ + EM
Sbjct: 167 LNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSG 226
Query: 222 IS-PDVFTYNTLIYGFCAGGQLRKAVGFF-NVMKMENIKPDVSTCDPLIHALCKERKVKQ 279
IS P+ TY+TL+ A + ++AV F +++ E I PD T + +I+ C+ +V++
Sbjct: 227 ISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVER 286
Query: 280 ANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMIS 339
A ++ M K PNV+ Y+ L++G+C + ++ +A+ + G+ D Y +++
Sbjct: 287 AKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMN 346
Query: 340 WLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-- 397
C + DEAM L M + D TY++++ G + A+ +L + S G+
Sbjct: 347 CFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHL 406
Query: 398 ---AYTSKLDAICNDYNFDDEIEKFMRY 422
+Y L+A+C + E+EK +++
Sbjct: 407 NKGSYRIILNALC----CNGELEKAVKF 430
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 141/318 (44%), Gaps = 10/318 (3%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G PD T LI+ + G A + G++ + + T L+ L G+ RS
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNT 196
N D+K+KGF+ +Y ++ + G ++ +I+E + T
Sbjct: 546 ENVISDMKSKGFK----PTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRT 601
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKR--ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKM 254
++ + KC + A L K+ PD+ +N+++ F +A G ++
Sbjct: 602 LL--LANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRE 659
Query: 255 ENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTK 314
+ + PD+ T + L+ + + +A ++ + K+ ++P++ YNT+I G+C M +
Sbjct: 660 DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQE 719
Query: 315 ARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIE 374
A + M RG+ P + TYN +S M E + M D +P+ T+ ++++
Sbjct: 720 AVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVD 779
Query: 375 GWLNLPHYMHAINLLAEM 392
G+ Y A++ ++++
Sbjct: 780 GYCRAGKYSEAMDFVSKI 797
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 11/331 (3%)
Query: 50 TQFNNILGSLVRMNHYPTAVSLSQQLELK----GIAPDIATLTILINCFCHLGRMNYAFS 105
T +++ L H+ AV L + L L + D + I + + + A
Sbjct: 137 TDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAK 196
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+L KI + Y D A TT++ G+ AI+ + +K G + VTY ++
Sbjct: 197 LLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTL----VTYNVIL 252
Query: 166 NELCEVGETGAA-LQLLRQIEEEHTDVQMY--NTIIKSMCEDKCVSDAYDLYNEMLLKRI 222
+ ++G + L +L ++ + + +T++ + + + +A + + E+
Sbjct: 253 DVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGY 312
Query: 223 SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS 282
P TYN L+ F G +A+ M+ + D T + L+ A + K+A
Sbjct: 313 EPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAG 372
Query: 283 VVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLC 342
V+ M K V PN Y T+ID Y + +A L ++M G P+ TYN ++S L
Sbjct: 373 VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
Query: 343 TSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
+ +E + + M P+ T++ ++
Sbjct: 433 KKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/414 (19%), Positives = 167/414 (40%), Gaps = 16/414 (3%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
A+ F++M P +N +L L + + + + ++ G +P+ AT ++
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA 464
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
+ G + V ++ ++PD TL+ G A + ++ GF
Sbjct: 465 LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNA 524
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDA 210
V TY L+N L G+ + ++ ++ + Y+ +++ +
Sbjct: 525 CV----TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGI 580
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
+ N + +I P TL+ L + F + K KPD+ + ++
Sbjct: 581 ERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSI 640
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
+ QA ++ ++ + + P++ YN+L+D Y + KA + T+ + PD
Sbjct: 641 FTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPD 700
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
+ +YN +I C +M EA+ + M + I+P TY+ + G+ A+ + A
Sbjct: 701 LVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYT-------AMGMFA 753
Query: 391 EMCSNGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIVLRNPSF 444
E+ + I +K D N+ F ++ + R + DF+ S I +P F
Sbjct: 754 EI-EDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFV--SKIKTFDPCF 804
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 118/284 (41%), Gaps = 11/284 (3%)
Query: 120 TALTTLMKGLCLNGEIRSAINFHD----DVKAKGFQFQVDRVSVTYRFLINELCEVGETG 175
T L +L+KGL +G A+ + + + + + R L E +
Sbjct: 137 TDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRE----SQYS 192
Query: 176 AALQLLRQI--EEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLI 233
A +LL +I +E DV+ Y TI+ + A DL+ M SP + TYN ++
Sbjct: 193 VAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVIL 252
Query: 234 YGFCAGGQ-LRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASV 292
F G+ RK +G + M+ + +K D TC ++ A +E +++A A +
Sbjct: 253 DVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGY 312
Query: 293 EPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMS 352
EP YN L+ + T+A + M D TYN +++ + EA
Sbjct: 313 EPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAG 372
Query: 353 LFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
+ M K + P+A TY+ +I+ + A+ L M G
Sbjct: 373 VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 157/389 (40%), Gaps = 37/389 (9%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + FN ++ + + Y A SL QL P T +LI +C G + A V
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 107 LGKILKRAYQPDTTALT---TLMKGLC-LNGEIRSAINFHDDVK---------------- 146
L ++ P T +T ++GL G AI+ +K
Sbjct: 235 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 294
Query: 147 -----AKGF----------QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HT 189
+K + Q TY L+N G A ++ Q++E+
Sbjct: 295 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 354
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
DV +YN +++S A ++++ M PD +YN ++ + G A F
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 414
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
MK I P + + L+ A K R V + ++V M + VEP+ F+ N++++ Y +
Sbjct: 415 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 474
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
Q TK + M T D+ TYNI+I+ + ++ LF + K+ +PD T+
Sbjct: 475 GQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTW 534
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGIA 398
+ I + Y+ + + EM +G A
Sbjct: 535 TSRIGAYSRKKLYVKCLEVFEEMIDSGCA 563
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 123/292 (42%), Gaps = 10/292 (3%)
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
K ++QPD L+ + + A + + + + D TY LI C
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED----TYALLIKAYCMA 225
Query: 172 GETGAALQLLRQIEEEHTD-----VQMYNTIIKSMCEDKC-VSDAYDLYNEMLLKRISPD 225
G A +L +++ H V +YN I+ + + K +A D++ M R P
Sbjct: 226 GLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPT 285
Query: 226 VFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVA 285
TYN +I + + + + M+ KP++ T L++A +E ++A +
Sbjct: 286 TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 345
Query: 286 AMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSN 345
+ + +EP+V++YN L++ Y A + M G PD +YNIM+ +
Sbjct: 346 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 405
Query: 346 MMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
+ +A ++F M I P +++ +L+ + ++ EM NG+
Sbjct: 406 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 457
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 148/350 (42%), Gaps = 7/350 (2%)
Query: 82 PDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINF 141
PD+ +LI+ + + A S+ ++L+ Y P L+K C+ G I A
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 142 HDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTD--VQMYNTIIK 199
+++ + V+V ++ + G T A+ + ++++ + + YN +I
Sbjct: 235 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 294
Query: 200 SMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKP 259
+ ++ LY EM + P++ TY L+ F G KA F ++ + ++P
Sbjct: 295 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 354
Query: 260 DVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLS 319
DV + L+ + + A + + M EP+ YN ++D Y + A +
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 414
Query: 320 HTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNL 379
M G+ P + ++ +++S + + + ++ M ++PD + ++ + L
Sbjct: 415 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 474
Query: 380 PHYMHAINLLAEM----CSNGIAYTSKLDAICNDYNFDDEIEK-FMRYKE 424
+ +LAEM C+ I+ + L I F + IE+ F+ KE
Sbjct: 475 GQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 524
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/329 (18%), Positives = 127/329 (38%), Gaps = 8/329 (2%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
A+ F M R P +N ++ + + + L ++ P+I T T L+
Sbjct: 269 EAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALV 328
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N F G A + ++ + +PD LM+ G A ++ G +
Sbjct: 329 NAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCE 388
Query: 152 FQVDRVSVTYRFLINELCEVG---ETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVS 208
DR S Y +++ G + A + ++++ T ++ + ++ + + + V+
Sbjct: 389 --PDRAS--YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT-MKSHMLLLSAYSKARDVT 443
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
+ EM + PD F N+++ + GQ K M+ D+ST + LI
Sbjct: 444 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 503
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
+ K +++ + + + + P+V + + I Y K + M G
Sbjct: 504 NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCA 563
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYM 357
PD T +++S + +++ S+ M
Sbjct: 564 PDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 9/192 (4%)
Query: 251 VMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLIN 310
+++ + +PDV + LI A ++ + K+A S+ ++++ P Y LI YC+
Sbjct: 167 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 226
Query: 311 QMTKARFLSHTMATRGVTPD---VHTYNIMISWLCT-SNMMDEAMSLFHYMDLKDIKPDA 366
+ +A + M V+P V YN I L +EA+ +F M KP
Sbjct: 227 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 367 ETYSILIEGWLNLPHYMHAINLLAEMCS-----NGIAYTSKLDAICNDYNFDDEIEKFMR 421
ETY+++I + + L EM S N YT+ ++A + + E F +
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 422 YKETGGDADFLI 433
+E G + D +
Sbjct: 347 LQEDGLEPDVYV 358
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 110/288 (38%), Gaps = 17/288 (5%)
Query: 16 MRYHSHSPRPFSHEA-VNAVSS----------FHNMLSMRPAPPITQFNNILGSLVRMNH 64
MR H P ++ A VNA + F + P + +N ++ S R +
Sbjct: 312 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 371
Query: 65 YPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTT 124
A + ++ G PD A+ I+++ + G + A +V ++ + P +
Sbjct: 372 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 431
Query: 125 LMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQI 184
L+ ++ ++ G V+ + ++N +G+ ++L ++
Sbjct: 432 LLSAYSKARDVTKCEAIVKEMSENG----VEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 487
Query: 185 EEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQL 242
E D+ YN +I + + +L+ E+ K PDV T+ + I +
Sbjct: 488 ENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLY 547
Query: 243 RKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKA 290
K + F M PD T L+ A E +V+Q SV+ M K
Sbjct: 548 VKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKG 595
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 130/258 (50%), Gaps = 11/258 (4%)
Query: 176 AALQLLRQIEEEHTDVQM--YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLI 233
L+L R++ D + +N+I+ S + V DA L +EM + + PD+ T+N+L+
Sbjct: 138 GKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLL 197
Query: 234 YGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVE 293
G+ + G + A+ M++ +KP S+ L+ A+ + +K ++ +++ +
Sbjct: 198 SGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLW 257
Query: 294 PNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSL 353
+V++ TLID Y + AR + M + + +N ++S L + ++ +A +L
Sbjct: 258 YDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIV----AWNSLVSGLSYACLLKDAEAL 313
Query: 354 FHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLDAICN 408
M+ + IKPDA T++ L G+ L A++++ +M G+A +T+
Sbjct: 314 MIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSK 373
Query: 409 DYNFDDEIEKFMRYKETG 426
+ NF + ++ F++ +E G
Sbjct: 374 NGNFRNALKVFIKMQEEG 391
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 164/390 (42%), Gaps = 51/390 (13%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
++ +N+IL S ++ + A+ L ++E+ G+ PDI T L++ + G A +VL
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLK 214
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
++ +P T+++++L++ + G ++ H + + V V T LI+
Sbjct: 215 RMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDV-YVETT---LIDMY 270
Query: 169 CEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFT 228
+ G A + ++ + ++ +N+++ + + DA L M + I PD T
Sbjct: 271 IKTGYLPYARMVFDMMDAK--NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 328
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
+N+L G+ G+ KA+ MK + + P+V + + K + A V M
Sbjct: 329 WNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 388
Query: 289 KASVEPNVFIYNTL---------------IDGYCL-INQMTKARFLSHTMATRGVTPDVH 332
+ V PN +TL + G+CL N + A + + G + D+
Sbjct: 389 EEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQ 448
Query: 333 TYNIMISW------LCTSNMM----------DEAMSLFHYMDLKDIKPDAETYSILI--- 373
+ I I W L + N M +E ++ F M ++PDA T++ ++
Sbjct: 449 S-AIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVC 507
Query: 374 -------EGW--LNLPHYMHAINLLAEMCS 394
EGW +L + I E CS
Sbjct: 508 KNSGLVQEGWKYFDLMRSRYGIIPTIEHCS 537
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 151/352 (42%), Gaps = 19/352 (5%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G+ +++ LI + G++ + V + R + L++ K G + A
Sbjct: 119 GLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTK----LGYVDDA 174
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLR--QIEEEHTDVQMYNT 196
I D+++ G + + VT+ L++ G + A+ +L+ QI ++
Sbjct: 175 IGLLDEMEICGLKPDI----VTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISS 230
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN 256
+++++ E + ++ +L ++ DV+ TLI + G L A F++M +N
Sbjct: 231 LLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKN 290
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKAR 316
I + L+ L +K A +++ M K ++P+ +N+L GY + + KA
Sbjct: 291 I----VAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKAL 346
Query: 317 FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIE-- 374
+ M +GV P+V ++ + S + A+ +F M + + P+A T S L++
Sbjct: 347 DVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
Query: 375 GWLNLPHY---MHAINLLAEMCSNGIAYTSKLDAICNDYNFDDEIEKFMRYK 423
G L+L H +H L + + T+ +D + IE F K
Sbjct: 407 GCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIK 458
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 134/343 (39%), Gaps = 61/343 (17%)
Query: 40 MLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGR 99
+ M A I +N+++ L A +L ++E +GI PD T L + + LG+
Sbjct: 282 VFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGK 341
Query: 100 MNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSV 159
A V+GK+ ++ P+ + T + G NG R+A+ ++ +G +S
Sbjct: 342 PEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMST 401
Query: 160 TYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLL 219
+ L L LL +E H N I C+ + D+Y +
Sbjct: 402 LLKIL-----------GCLSLLHSGKEVHGFCLRKNLI----CDAYVATALVDMYGKSGD 446
Query: 220 KRISPDVF---------TYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
+ + ++F ++N ++ G+ G+ + + F+VM ++PD T ++ +
Sbjct: 447 LQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL-S 505
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
+CK + Q +G+ + M ++R+ G+ P
Sbjct: 506 VCKNSGLVQ------------------------EGWKYFDLM-RSRY--------GIIPT 532
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
+ + M+ L S +DEA M L KPDA + +
Sbjct: 533 IEHCSCMVDLLGRSGYLDEAWDFIQTMSL---KPDATIWGAFL 572
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 157/389 (40%), Gaps = 37/389 (9%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + FN ++ + + Y A SL QL P T +LI +C G + A V
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 107 LGKILKRAYQPDTTALT---TLMKGLC-LNGEIRSAINFHDDVK---------------- 146
L ++ P T +T ++GL G AI+ +K
Sbjct: 213 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 272
Query: 147 -----AKGF----------QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HT 189
+K + Q TY L+N G A ++ Q++E+
Sbjct: 273 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 332
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
DV +YN +++S A ++++ M PD +YN ++ + G A F
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 392
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
MK I P + + L+ A K R V + ++V M + VEP+ F+ N++++ Y +
Sbjct: 393 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 452
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
Q TK + M T D+ TYNI+I+ + ++ LF + K+ +PD T+
Sbjct: 453 GQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTW 512
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGIA 398
+ I + Y+ + + EM +G A
Sbjct: 513 TSRIGAYSRKKLYVKCLEVFEEMIDSGCA 541
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 123/292 (42%), Gaps = 10/292 (3%)
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
K ++QPD L+ + + A + + + + D TY LI C
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED----TYALLIKAYCMA 203
Query: 172 GETGAALQLLRQIEEEHTD-----VQMYNTIIKSMCEDKC-VSDAYDLYNEMLLKRISPD 225
G A +L +++ H V +YN I+ + + K +A D++ M R P
Sbjct: 204 GLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPT 263
Query: 226 VFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVA 285
TYN +I + + + + M+ KP++ T L++A +E ++A +
Sbjct: 264 TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 323
Query: 286 AMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSN 345
+ + +EP+V++YN L++ Y A + M G PD +YNIM+ +
Sbjct: 324 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 383
Query: 346 MMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
+ +A ++F M I P +++ +L+ + ++ EM NG+
Sbjct: 384 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 435
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 148/350 (42%), Gaps = 7/350 (2%)
Query: 82 PDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINF 141
PD+ +LI+ + + A S+ ++L+ Y P L+K C+ G I A
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 142 HDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTD--VQMYNTIIK 199
+++ + V+V ++ + G T A+ + ++++ + + YN +I
Sbjct: 213 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 272
Query: 200 SMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKP 259
+ ++ LY EM + P++ TY L+ F G KA F ++ + ++P
Sbjct: 273 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 332
Query: 260 DVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLS 319
DV + L+ + + A + + M EP+ YN ++D Y + A +
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 392
Query: 320 HTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNL 379
M G+ P + ++ +++S + + + ++ M ++PD + ++ + L
Sbjct: 393 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 452
Query: 380 PHYMHAINLLAEM----CSNGIAYTSKLDAICNDYNFDDEIEK-FMRYKE 424
+ +LAEM C+ I+ + L I F + IE+ F+ KE
Sbjct: 453 GQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 502
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/329 (18%), Positives = 127/329 (38%), Gaps = 8/329 (2%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
A+ F M R P +N ++ + + + L ++ P+I T T L+
Sbjct: 247 EAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALV 306
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N F G A + ++ + +PD LM+ G A ++ G +
Sbjct: 307 NAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCE 366
Query: 152 FQVDRVSVTYRFLINELCEVG---ETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVS 208
DR S Y +++ G + A + ++++ T ++ + ++ + + + V+
Sbjct: 367 --PDRAS--YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT-MKSHMLLLSAYSKARDVT 421
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
+ EM + PD F N+++ + GQ K M+ D+ST + LI
Sbjct: 422 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 481
Query: 269 HALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVT 328
+ K +++ + + + + P+V + + I Y K + M G
Sbjct: 482 NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCA 541
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYM 357
PD T +++S + +++ S+ M
Sbjct: 542 PDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 9/192 (4%)
Query: 251 VMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLIN 310
+++ + +PDV + LI A ++ + K+A S+ ++++ P Y LI YC+
Sbjct: 145 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 204
Query: 311 QMTKARFLSHTMATRGVTPD---VHTYNIMISWLCT-SNMMDEAMSLFHYMDLKDIKPDA 366
+ +A + M V+P V YN I L +EA+ +F M KP
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 367 ETYSILIEGWLNLPHYMHAINLLAEMCS-----NGIAYTSKLDAICNDYNFDDEIEKFMR 421
ETY+++I + + L EM S N YT+ ++A + + E F +
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 422 YKETGGDADFLI 433
+E G + D +
Sbjct: 325 LQEDGLEPDVYV 336
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 110/288 (38%), Gaps = 17/288 (5%)
Query: 16 MRYHSHSPRPFSHEA-VNAVSS----------FHNMLSMRPAPPITQFNNILGSLVRMNH 64
MR H P ++ A VNA + F + P + +N ++ S R +
Sbjct: 290 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 349
Query: 65 YPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTT 124
A + ++ G PD A+ I+++ + G + A +V ++ + P +
Sbjct: 350 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 409
Query: 125 LMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQI 184
L+ ++ ++ G V+ + ++N +G+ ++L ++
Sbjct: 410 LLSAYSKARDVTKCEAIVKEMSENG----VEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 465
Query: 185 EEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQL 242
E D+ YN +I + + +L+ E+ K PDV T+ + I +
Sbjct: 466 ENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLY 525
Query: 243 RKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKA 290
K + F M PD T L+ A E +V+Q SV+ M K
Sbjct: 526 VKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKG 573
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 155/366 (42%), Gaps = 16/366 (4%)
Query: 17 RYHSHSPRPFSH--EAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQ 74
R++ HS R + E+ + + M + A + N+ + M Y A + +
Sbjct: 128 RHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEA 187
Query: 75 ------LELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKG 128
+E + P++ L++ C + A V + R + PD+ + L++G
Sbjct: 188 IYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEG 246
Query: 129 LCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE- 187
+ A ++ G + VTY +++ LC+ G AL ++R ++
Sbjct: 247 WGKEPNLPKAREVFREMIDAGCHPDI----VTYSIMVDILCKAGRVDEALGIVRSMDPSI 302
Query: 188 -HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAV 246
+Y+ ++ + + + +A D + EM + DV +N+LI FC +++
Sbjct: 303 CKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVY 362
Query: 247 GFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGY 306
MK + + P+ +C+ ++ L + + +A V MIK EP+ Y +I +
Sbjct: 363 RVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMF 421
Query: 307 CLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDA 366
C +M A + M +GV P +HT++++I+ LC +A L M I+P
Sbjct: 422 CEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSG 481
Query: 367 ETYSIL 372
T+ L
Sbjct: 482 VTFGRL 487
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 152/354 (42%), Gaps = 15/354 (4%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMN---YAFS 105
+ ++ ++ S ++ Y L + K + ++ T I++ + +++ YAF+
Sbjct: 134 VRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFN 192
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
V+ K P+ A L+ LC + +R A ++++ + F D S TY L+
Sbjct: 193 VMEKY---DLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR---FTPD--SKTYSILL 244
Query: 166 NELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
+ A ++ R++ + H D+ Y+ ++ +C+ V +A + M
Sbjct: 245 EGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICK 304
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
P F Y+ L++ + +L +AV F M+ +K DV+ + LI A CK ++K V
Sbjct: 305 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 364
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
+ M V PN N ++ + +A F + PD TY ++I C
Sbjct: 365 LKEMKSKGVTPNSKSCNIILRHLIERGEKDEA-FDVFRKMIKVCEPDADTYTMVIKMFCE 423
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
M+ A ++ YM K + P T+S+LI G A LL EM GI
Sbjct: 424 KKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 477
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 1/213 (0%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
+V+ + +++ + V +A +N M + P++ +N L+ C +RKA F
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
M+ + PD T L+ KE + +A V MI A P++ Y+ ++D C
Sbjct: 227 ENMR-DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKA 285
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
++ +A + +M P Y++++ T N ++EA+ F M+ +K D +
Sbjct: 286 GRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVF 345
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGIAYTSK 402
+ LI + + +L EM S G+ SK
Sbjct: 346 NSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSK 378
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 108/282 (38%), Gaps = 33/282 (11%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S A F NM R P ++ +L + + P A + +++ G PDI T
Sbjct: 216 SKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVT 274
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
+I+++ C GR++ A ++ + +P T + L+ + A++ +++
Sbjct: 275 YSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEME 334
Query: 147 AKGFQFQV-------------DRVSVTYRFL------------------INELCEVGETG 175
G + V +R+ YR L + L E GE
Sbjct: 335 RSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKD 394
Query: 176 AALQLLRQ-IEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIY 234
A + R+ I+ D Y +IK CE K + A ++ M K + P + T++ LI
Sbjct: 395 EAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLIN 454
Query: 235 GFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERK 276
G C +KA M I+P T L L KE +
Sbjct: 455 GLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 144/323 (44%), Gaps = 6/323 (1%)
Query: 76 ELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEI 135
E +G A D T +++ + SVL ++ + T T MK E
Sbjct: 187 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMET-FTIAMKAFAAAKER 245
Query: 136 RSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT-DVQMY 194
+ A+ + +K F+ V+ ++ L++ L A L +++E T ++ Y
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINC----LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTY 301
Query: 195 NTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKM 254
++ C + + +A ++N+M+ + + PD+ +N ++ G + A+ F+VMK
Sbjct: 302 TVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKS 361
Query: 255 ENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTK 314
+ P+V + +I CK+ ++ A M+ + ++P+ +Y LI G+ ++
Sbjct: 362 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 315 ARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIE 374
L M +G PD TYN +I + M + A +++ M +I+P T++++++
Sbjct: 422 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMK 481
Query: 375 GWLNLPHYMHAINLLAEMCSNGI 397
+ +Y + EM GI
Sbjct: 482 SYFMARNYEMGRAVWEEMIKKGI 504
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 149/349 (42%), Gaps = 10/349 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+N+++ L + + T VS+ +++ KG+ + T TI + F A + +
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
K ++ + L+ L + A D +K + F + +TY L+N C V
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER---FTPN--MMTYTVLLNGWCRV 311
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
A ++ + ++ D+ +N +++ + + SDA L++ M K P+V +Y
Sbjct: 312 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
+I FC + A+ +F+ M ++PD + LI ++K+ ++ M +
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYN-IMISWLCTSNMMD 348
P+ YN LI A + + M + P +HT+N IM S+ N +
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARN-YE 490
Query: 349 EAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
+++ M K I PD +Y++LI G + A L EM G+
Sbjct: 491 MGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 134/337 (39%), Gaps = 38/337 (11%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
+ E AV F M + + N +L SL R A L +L+ + P++ T
Sbjct: 242 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMT 300
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
T+L+N +C + + A + ++ + +PD A +++GL + + AI +K
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMK 360
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKC 206
+KG C +V+ Y +I+ C+
Sbjct: 361 SKG------------------PC-------------------PNVRSYTIMIRDFCKQSS 383
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+ A + +++M+ + PD Y LI GF +L M+ + PD T +
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
LI + ++ + A + MI+ +EP++ +N ++ Y + R + M +G
Sbjct: 444 LIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKG 503
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIK 363
+ PD ++Y ++I L EA M K +K
Sbjct: 504 ICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMK 540
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 110/266 (41%), Gaps = 6/266 (2%)
Query: 39 NMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLG 98
+ L R P + + +L R+ + A + + +G+ PDI +++
Sbjct: 288 DKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSR 347
Query: 99 RMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVS 158
+ + A + + + P+ + T +++ C + +AI + DD+ G Q +
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD----A 403
Query: 159 VTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNE 216
Y LI + +LL++++E+ D + YN +IK M K A +YN+
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNK 463
Query: 217 MLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERK 276
M+ I P + T+N ++ + + M + I PD ++ LI L E K
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGK 523
Query: 277 VKQANSVVAAMIKASVEPNVFIYNTL 302
++A + M+ ++ + YN
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDYNKF 549
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 111/267 (41%), Gaps = 50/267 (18%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
D + YN+++ + + + + EM K + + T+ + F A + +KAVG F
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIF 252
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
+MK K V T + L+ +L + + K+A +++ L
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ---------------VLFDKL------- 290
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
K RF TP++ TY ++++ C + EA +++ M + +KPD +
Sbjct: 291 ----KERF----------TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAH 336
Query: 370 SILIEGWLNLPHYMHAINLLAEM-----CSNGIAYTSKLDAICNDYNFDDEIEKFMRYKE 424
++++EG L AI L M C N +YT + C + + IE F +
Sbjct: 337 NVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 396
Query: 425 TGGDADFLIASHIVLRNPSFKATGFGT 451
+G D + + ++ TGFGT
Sbjct: 397 SGLQPDAAVYTCLI--------TGFGT 415
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 156/379 (41%), Gaps = 24/379 (6%)
Query: 26 FSHEAVNAVSSFHNMLSMRP--APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPD 83
+S V+ + H ++ + P +T +N ++ L + A L + +G PD
Sbjct: 137 YSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPD 196
Query: 84 IATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHD 143
+ T T LI +C + + A V ++ +P++ L+ L+ G ++ +
Sbjct: 197 VVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMK 256
Query: 144 DV------------KAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDV 191
++ KA F VD S+ N++ E+ E + L + E
Sbjct: 257 ELWEYMKNETDTSMKAAAFANLVD--SMCREGYFNDIFEIAEN---MSLCESVNVEFA-- 309
Query: 192 QMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNV 251
Y +I S+C + A + M K + P +YN +I+G C G +A
Sbjct: 310 --YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEE 367
Query: 252 MKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQ 311
P T L+ +LCKE +A +V+ M++ IYN + G C+++
Sbjct: 368 GSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDN 427
Query: 312 MTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLF-HYMDLKDIKPDAETYS 370
T+ + +M PD +T N +I+ LC +D+AM + M K PDA T +
Sbjct: 428 PTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLN 487
Query: 371 ILIEGWLNLPHYMHAINLL 389
++ G L A+++L
Sbjct: 488 TVMCGLLAQGRAEEALDVL 506
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 163/350 (46%), Gaps = 10/350 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLEL-KGIAPDIATLTILINCFCHLGRMNYAFSVLGKI 110
F N++ S+ R ++ +++ + L + + + A +I+ C R + A ++ +
Sbjct: 275 FANLVDSMCREGYFNDIFEIAENMSLCESVNVEFA-YGHMIDSLCRYRRNHGAARIVYIM 333
Query: 111 LKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCE 170
+ +P T+ ++ GLC +G A ++ G +F+ TY+ L+ LC+
Sbjct: 334 KSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEE----GSEFEFFPSEYTYKLLMESLCK 389
Query: 171 VGETGAALQLLR-QIEEEHTD-VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFT 228
+TG A +L + +E D ++YN ++ +C ++ ++ ML PD +T
Sbjct: 390 ELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYT 449
Query: 229 YNTLIYGFCAGGQLRKAVGFFN-VMKMENIKPDVSTCDPLIHALCKERKVKQANSVV-AA 286
NT+I G C G++ A+ + +M + PD T + ++ L + + ++A V+
Sbjct: 450 LNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRV 509
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNM 346
M + ++P V YN +I G +++ +A + + VT D TY I+I LC +N
Sbjct: 510 MPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNK 569
Query: 347 MDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
+D A + + + DA Y+ ++G + A + L ++ +G
Sbjct: 570 VDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSG 619
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 136/322 (42%), Gaps = 11/322 (3%)
Query: 78 KGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRS 137
K P + L+N C + R+ A ++ + R + PD TTL+ G C E+
Sbjct: 156 KEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEV 215
Query: 138 AINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE---EHTDVQM- 193
A D+++ G + S+T LI ++ + +L++++ E TD M
Sbjct: 216 AHKVFDEMRVCGIRPN----SLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMK 271
Query: 194 ---YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFN 250
+ ++ SMC + +D +++ M L F Y +I C + A
Sbjct: 272 AAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVY 331
Query: 251 VMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLIN 310
+MK + +KP ++ + +IH LCK+ +A ++ + P+ + Y L++ C
Sbjct: 332 IMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKEL 391
Query: 311 QMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
KAR + M + YNI + LC + E +++ M D +PD T +
Sbjct: 392 DTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLN 451
Query: 371 ILIEGWLNLPHYMHAINLLAEM 392
+I G + A+ +L +M
Sbjct: 452 TVINGLCKMGRVDDAMKVLDDM 473
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 13/242 (5%)
Query: 189 TDVQMYNTIIKSMCEDKCVSD-AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVG 247
TD + I S+C + D A + + + L+ PD +++I+ C G+ +A
Sbjct: 52 TDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHR 111
Query: 248 FFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI--KASVEPNVFIYNTLIDG 305
F + PD TC+ +I L R V+ +I K P++ YN L++
Sbjct: 112 RFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQ 171
Query: 306 YCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPD 365
C I ++ A L M RG PDV T+ +I C ++ A +F M + I+P+
Sbjct: 172 LCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPN 231
Query: 366 AETYSILIEGWLNLPHYMHAINLLAEMCS----------NGIAYTSKLDAICNDYNFDDE 415
+ T S+LI G+L + L+ E+ A+ + +D++C + F+D
Sbjct: 232 SLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDI 291
Query: 416 IE 417
E
Sbjct: 292 FE 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 121/307 (39%), Gaps = 6/307 (1%)
Query: 91 INCFCHLGRM-NYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKG 149
I+ C + R + A +L + R Y+PD+ L++++ LC G A A G
Sbjct: 61 IHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASG 120
Query: 150 FQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSD 209
F +V L+ V G +L+ +E + YN ++ +C V D
Sbjct: 121 FIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVID 180
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
A+ L +M + PDV T+ TLI G+C +L A F+ M++ I+P+ T LI
Sbjct: 181 AHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIG 240
Query: 270 ALCKERKVKQANSVVAAMI-----KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMAT 324
K R V+ ++ + + + L+D C ++ M+
Sbjct: 241 GFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSL 300
Query: 325 RGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMH 384
Y MI LC A + + M K +KP +Y+ +I G M
Sbjct: 301 CESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMR 360
Query: 385 AINLLAE 391
A LL E
Sbjct: 361 AYQLLEE 367
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 135/335 (40%), Gaps = 15/335 (4%)
Query: 68 AVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMK 127
A+ + L L+G PD L+ +I+ C GR + A L + PD ++
Sbjct: 74 ALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIA 133
Query: 128 GLCLNGEIRSAINFHDDV-KAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE 186
L + RS ++ + + GF+ + Y L+N+LC + A +L+ +
Sbjct: 134 RLLYS---RSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRN 190
Query: 187 EH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFC------A 238
DV + T+I CE + + A+ +++EM + I P+ T + LI GF
Sbjct: 191 RGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVET 250
Query: 239 GGQLRKAVGFFNVMKME-NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVF 297
G +L K + + MK E + + L+ ++C+E + M F
Sbjct: 251 GRKLMKEL--WEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEF 308
Query: 298 IYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYM 357
Y +ID C + A + + M ++G+ P +YN +I LC A L
Sbjct: 309 AYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEG 368
Query: 358 DLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
+ P TY +L+E A N+L M
Sbjct: 369 SEFEFFPSEYTYKLLMESLCKELDTGKARNVLELM 403
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 155/345 (44%), Gaps = 13/345 (3%)
Query: 59 LVRMNHYPTAVSLSQQL-ELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQP 117
L R N + +++L + E P + +++ + + A + ++ +RA P
Sbjct: 129 LSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAP 188
Query: 118 DTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVS---VTYRFLINELCEVGET 174
D +TL+ G SA+++ + + DRVS V Y LI + +
Sbjct: 189 DRYTYSTLITSFGKEGMFDSALSWLQ-------KMEQDRVSGDLVLYSNLIELSRRLCDY 241
Query: 175 GAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL 232
A+ + +++ D+ YN++I + K +A L EM + P+ +Y+TL
Sbjct: 242 SKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 301
Query: 233 IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASV 292
+ + + +A+ F MK N D++TC+ +I + VK+A+ + ++ K +
Sbjct: 302 LSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI 361
Query: 293 EPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMS 352
EPNV YNT++ Y +A L M + + +V TYN MI + ++A +
Sbjct: 362 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATN 421
Query: 353 LFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
L M + I+P+A TYS +I W A L ++ S+G+
Sbjct: 422 LVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGV 466
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 155/351 (44%), Gaps = 12/351 (3%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + +N +L +++R + A L ++ + +APD T + LI F G + A S
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 107 LGKILKRAYQPDT---TALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRF 163
L K+ + D + L L + LC + AI+ +K G + V Y
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLC---DYSKAISIFSRLKRSGITPDL----VAYNS 265
Query: 164 LINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKR 221
+IN + A L++++ E + Y+T++ E+ +A ++ EM
Sbjct: 266 MINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVN 325
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
+ D+ T N +I + +++A F ++ +I+P+V + + ++ + +A
Sbjct: 326 CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAI 385
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
+ M + +E NV YNT+I Y + KA L M +RG+ P+ TY+ +IS
Sbjct: 386 HLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIW 445
Query: 342 CTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
+ +D A +LF + ++ D Y +I + + HA LL E+
Sbjct: 446 GKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL 496
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 165/388 (42%), Gaps = 7/388 (1%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A+S M R + + ++N++ R+ Y A+S+ +L+ GI PD+ +I
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
N + A ++ ++ + P+T + +TL+ N + A++ ++K
Sbjct: 268 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAY 211
+ ++ + +L V E LR+++ E +V YNTI++ E + +A
Sbjct: 328 LDLTTCNIMID-VYGQLDMVKEADRLFWSLRKMDIE-PNVVSYNTILRVYGEAELFGEAI 385
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
L+ M K I +V TYNT+I + + KA M+ I+P+ T +I
Sbjct: 386 HLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIW 445
Query: 272 CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV 331
K K+ +A ++ + + VE + +Y T+I Y + M A+ L H + PD
Sbjct: 446 GKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDN 501
Query: 332 HTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE 391
I+ L + +EA +F D + +I + Y++ I + +
Sbjct: 502 IPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEK 561
Query: 392 MCSNGIAYTSKLDA-ICNDYNFDDEIEK 418
M + G S + A + N Y E EK
Sbjct: 562 MRTAGYFPDSNVIAMVLNAYGKQREFEK 589
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 175/421 (41%), Gaps = 51/421 (12%)
Query: 31 VNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
+ A+S M+++ P +N+++ L + N SL ++ PD+ T I+
Sbjct: 494 IAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIV 553
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
+N C + AF+++ + + +P ++++ L G + A ++ AK
Sbjct: 554 VNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEA----EETFAKML 609
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVS 208
+ + + Y +IN G A +L+ ++ + Y +I + +
Sbjct: 610 ESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMME 669
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPD----VSTC 264
++ML +SP+V Y LI F G + + F +M +IK D ++
Sbjct: 670 KGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLL 729
Query: 265 DPLIHALCKERK------------------VKQANSV---------------VAAMIKAS 291
L A+ +++K K S+ V +K S
Sbjct: 730 SGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKS 789
Query: 292 VEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAM 351
+ PN++++NT+I GYC ++ +A +M G+ P++ TY I++ + ++ A+
Sbjct: 790 IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAI 849
Query: 352 SLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAI 406
LF + + +PD YS L++G + + A+ L+ EM +GI +Y L +
Sbjct: 850 DLF---EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCL 906
Query: 407 C 407
C
Sbjct: 907 C 907
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 138/329 (41%), Gaps = 8/329 (2%)
Query: 72 SQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCL 131
+Q++ GI PD + L ++ C L R + A + L +I+ Y P + + ++ LC
Sbjct: 119 NQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCN 178
Query: 132 NGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQI---EEEH 188
A + + VK +G + + L LC G A+ +L +
Sbjct: 179 QDRFLEAFHCFEQVKERGSGLWL----WCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMP 234
Query: 189 TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGF 248
V +Y ++ C+ C ++A L++ M + D Y L+ +C + A+
Sbjct: 235 LPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRL 294
Query: 249 FNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCL 308
+ M + + D + LIH K + + + + MIK V+ NVF Y+ +I YC
Sbjct: 295 YLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCK 354
Query: 309 INQMTKA-RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAE 367
+ A R + + ++ +VH Y +I MD+A+ L M I PD
Sbjct: 355 EGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHI 414
Query: 368 TYSILIEGWLNLPHYMHAINLLAEMCSNG 396
TY +L++ +A+ +L + NG
Sbjct: 415 TYFVLLKMLPKCHELKYAMVILQSILDNG 443
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 164/408 (40%), Gaps = 48/408 (11%)
Query: 28 HEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATL 87
+A A+ L +RP I +++I+GSL + A ++ GI PD
Sbjct: 563 RDAAFAIIDAMEELGLRPTVAI--YSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAY 620
Query: 88 TILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKA 147
I+IN + GR++ A ++ +++K +P + T L+ G G + + D +
Sbjct: 621 MIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLE 680
Query: 148 KGFQFQVDRVSVTYRFLINELCEVGETGAALQLL-----RQIEEEHTD-VQMYNTIIKSM 201
G V V Y LI + G+ + L I+ +H + + + + ++M
Sbjct: 681 DGLSPNV----VLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAM 736
Query: 202 CEDKCVSDAYDLYNEMLLKR---------------------------------ISPDVFT 228
K + E LL+R I P+++
Sbjct: 737 ARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYL 796
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
+NT+I G+CA G+L +A M+ E I P++ T L+ + + ++ A +
Sbjct: 797 HNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEG-- 854
Query: 289 KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMD 348
+ EP+ +Y+TL+ G C + A L M G+ P+ +Y ++ LC S +
Sbjct: 855 -TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTM 913
Query: 349 EAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
EA+ + M DI P + ++ LI A L A M +G
Sbjct: 914 EAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 134/325 (41%), Gaps = 20/325 (6%)
Query: 80 IAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAI 139
I+ ++ T LI F G M+ A +L ++L PD L+K L E++ A+
Sbjct: 374 ISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAM 433
Query: 140 NFHDDVKAKGFQFQ------VDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQM 193
+ G + + V L+ E+ AA+ L
Sbjct: 434 VILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGL------------- 480
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
+ ++C + A +M+ +P F+YN++I + N+++
Sbjct: 481 -AVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQ 539
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
+ PDV T +++ LCK+ A +++ AM + + P V IY+++I ++
Sbjct: 540 ELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVV 599
Query: 314 KARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
+A M G+ PD Y IMI+ + +DEA L + ++P + TY++LI
Sbjct: 600 EAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
Query: 374 EGWLNLPHYMHAINLLAEMCSNGIA 398
G++ + L +M +G++
Sbjct: 660 SGFVKMGMMEKGCQYLDKMLEDGLS 684
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 4/236 (1%)
Query: 161 YRFLINELCEVGETGAALQLLRQIEEE-HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLL 219
+ L++ LC+ G LLR++ D +N + C + A L EM+
Sbjct: 237 FNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIE 296
Query: 220 KRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK---PDVSTCDPLIHALCKERK 276
P+ FTY I FC G + +A F+ M + P T +I AL K K
Sbjct: 297 AGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDK 356
Query: 277 VKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNI 336
++ ++ MI P+V Y +I+G C+ ++ +A M+ +G PD+ TYN
Sbjct: 357 AEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNC 416
Query: 337 MISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
+ LC + DEA+ L+ M P +TY++LI + + A N EM
Sbjct: 417 FLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEM 472
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 120/294 (40%), Gaps = 10/294 (3%)
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
K ++ QP+ A L+ LC G ++ + + + +V + T+ L
Sbjct: 224 KRIRVKTQPEINAFNMLLDALCKCGLVKEG-----EALLRRMRHRVKPDANTFNVLFFGW 278
Query: 169 CEVGETGAALQLLRQ-IEEEHTDVQM-YNTIIKSMCEDKCVSDAYDLYNEMLLKRIS--- 223
C V + A++LL + IE H Y I + C+ V +A DL++ M+ K +
Sbjct: 279 CRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSA 338
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
P T+ +I + + M PDVST +I +C KV +A
Sbjct: 339 PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 398
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
+ M P++ YN + C + +A L M P V TYN++IS
Sbjct: 399 LDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFE 458
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
+ D A + + MD +D D ETY +I G + A LL E+ + G+
Sbjct: 459 MDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGL 512
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/348 (18%), Positives = 134/348 (38%), Gaps = 47/348 (13%)
Query: 24 RPFSHEAVNAVSSF--HNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIA 81
R + + V F + ++ P I FN +L +L + +L +++ + +
Sbjct: 207 RKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VK 265
Query: 82 PDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINF 141
PD T +L +C + A +L ++++ ++P+ + C G + A +
Sbjct: 266 PDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADL 325
Query: 142 HDDVKAKG---------------------------FQFQVDRVSV-------TYRFLINE 167
D + KG F+ +S TY+ +I
Sbjct: 326 FDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEG 385
Query: 168 LCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPD 225
+C + A + L ++ + D+ YN ++ +CE++ +A LY M+ R +P
Sbjct: 386 MCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPS 445
Query: 226 VFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVA 285
V TYN LI F A + M + DV T +I+ L + K+A ++
Sbjct: 446 VQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLE 505
Query: 286 AMIKASVEPNVFIYNTLIDGYCLINQMTK--------ARFLSHTMATR 325
++ ++ ++++ + + + +F +H+MA R
Sbjct: 506 EVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKKFYNHSMARR 553
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 136/311 (43%), Gaps = 8/311 (2%)
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDD-VKA 147
+L+ F G ++ +++K Y P T L+ +C GE A + + +K+
Sbjct: 157 LLMKIFAECGEYKAMCRLIDEMIKDGY-PTTACTFNLL--ICTCGEAGLARDVVEQFIKS 213
Query: 148 KGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDK 205
K F ++ + S Y +++ L V + + Q+ E+ DV YN ++ +
Sbjct: 214 KTFNYRPYKHS--YNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLG 271
Query: 206 CVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCD 265
Y L +EM+ SPD++TYN L++ G + A+ N M+ ++P V
Sbjct: 272 KTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFT 331
Query: 266 PLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATR 325
LI L + K++ + +K P+V Y +I GY ++ KA + M +
Sbjct: 332 TLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEK 391
Query: 326 GVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHA 385
G P+V TYN MI C + EA +L M+ + P+ YS L+ N + A
Sbjct: 392 GQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEA 451
Query: 386 INLLAEMCSNG 396
++ +M G
Sbjct: 452 HEVVKDMVEKG 462
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 6/262 (2%)
Query: 30 AVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTI 89
A + V F + P +N IL SL+ + Y + +Q+ G PD+ T I
Sbjct: 203 ARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNI 262
Query: 90 LINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKG 149
++ LG+ + + +L +++K + PD L+ L + +A+N + ++ G
Sbjct: 263 VMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVG 322
Query: 150 FQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCV 207
+ V + + LI+ L G+ A + + + DV Y +I +
Sbjct: 323 VEPGV----IHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGEL 378
Query: 208 SDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPL 267
A +++ EM K P+VFTYN++I GFC G+ ++A M+ P+ L
Sbjct: 379 EKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTL 438
Query: 268 IHALCKERKVKQANSVVAAMIK 289
++ L KV +A+ VV M++
Sbjct: 439 VNNLKNAGKVLEAHEVVKDMVE 460
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 114/235 (48%), Gaps = 15/235 (6%)
Query: 143 DDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE---EHTDVQMYNTIIK 199
DD+K++ F V R+ + Y + G A +L ++ E E T V+ +N ++
Sbjct: 117 DDIKSEDF---VIRIMLLYGY-------SGMAEHAHKLFDEMPELNCERT-VKSFNALLS 165
Query: 200 SMCEDKCVSDAYDLYNEMLLK-RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
+ K + +A + E+ K I+PD+ TYNT+I C G + + F ++ +
Sbjct: 166 AYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFE 225
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFL 318
PD+ + + L+ + + + + M ++ PN+ YN+ + G + T A L
Sbjct: 226 PDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNL 285
Query: 319 SHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
M T G++PDVHTYN +I+ N ++E M ++ M K + PD TY +LI
Sbjct: 286 IDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLI 340
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 101/206 (49%), Gaps = 3/206 (1%)
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE---HTDVQMYNTIIKSMCEDKCV 207
+ +R ++ L++ + A++ +++ E+ D+ YNT+IK++C +
Sbjct: 150 ELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSM 209
Query: 208 SDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPL 267
D ++ E+ PD+ ++NTL+ F + +++MK +N+ P++ + +
Sbjct: 210 DDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSR 269
Query: 268 IHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGV 327
+ L + +K A +++ M + P+V YN LI Y + N + + + M +G+
Sbjct: 270 VRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGL 329
Query: 328 TPDVHTYNIMISWLCTSNMMDEAMSL 353
TPD TY ++I LC +D A+ +
Sbjct: 330 TPDTVTYCMLIPLLCKKGDLDRAVEV 355
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 40/275 (14%)
Query: 26 FSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELK-GIAPDI 84
+S A +A F M + + FN +L + V A+ ++L K GI PD+
Sbjct: 134 YSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDL 193
Query: 85 ATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDD 144
T +I C G M+ S+ ++ K ++PD + TL++
Sbjct: 194 VTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLE----------------- 236
Query: 145 VKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCED 204
F EL G+ L + + +++ YN+ ++ + +
Sbjct: 237 -----------------EFYRRELFVEGDRIWDLMKSKNL---SPNIRSYNSRVRGLTRN 276
Query: 205 KCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTC 264
K +DA +L + M + ISPDV TYN LI + L + + +N MK + + PD T
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 265 DPLIHALCKERKVKQANSVVAAMIKASV--EPNVF 297
LI LCK+ + +A V IK + PN++
Sbjct: 337 CMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMY 371
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 98/233 (42%), Gaps = 6/233 (2%)
Query: 193 MYNTIIKSMCEDKCVS--DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFN 250
+Y+ I+ + E K S D Y + S D L+YG+ G A F+
Sbjct: 89 LYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYS--GMAEHAHKLFD 146
Query: 251 VMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI-KASVEPNVFIYNTLIDGYCLI 309
M N + V + + L+ A +K+ +A + K + P++ YNT+I C
Sbjct: 147 EMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRK 206
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
M + + G PD+ ++N ++ + E ++ M K++ P+ +Y
Sbjct: 207 GSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSY 266
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGIAY-TSKLDAICNDYNFDDEIEKFMR 421
+ + G + A+NL+ M + GI+ +A+ Y D+ +E+ M+
Sbjct: 267 NSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMK 319
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 131/301 (43%), Gaps = 32/301 (10%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S E AV F+ M+ + +P + + +++ V + A ++ +++ +G+APDI
Sbjct: 260 SGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVL 319
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGE------IRSAI- 139
++I+ + LGR A V + KR PD +++ LCL+G+ I I
Sbjct: 320 CNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIG 379
Query: 140 ------------NFHDDVKAKGFQFQVDRV---------SVTYRFLINELCEVGETGAAL 178
N + + +V + TY ++ LC G AA+
Sbjct: 380 TDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAI 439
Query: 179 QLLRQI--EEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGF 236
++ + I E++H D ++ II S+ E + A L+ +L++ DV +Y I G
Sbjct: 440 KMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGL 499
Query: 237 CAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVE--P 294
++ +A MK I P+ T +I LCKE++ ++ ++ I+ VE P
Sbjct: 500 VRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDP 559
Query: 295 N 295
N
Sbjct: 560 N 560
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 159/368 (43%), Gaps = 22/368 (5%)
Query: 52 FNNILGSLVRMNH-YPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKI 110
F++++G + ++ Y + + ++L++ G +L+ F + A V +
Sbjct: 75 FDHMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGM 134
Query: 111 LKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCE 170
+ P+T A+ +M + A+ + ++ + F ++ ++ C
Sbjct: 135 SSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNF--------FSFDIALSHFCS 186
Query: 171 VGE----TGAALQLLRQIEEE-HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPD 225
G G + L R I E + + + + I++ C CVS+A+ + M+ IS
Sbjct: 187 RGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVS 246
Query: 226 VFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVA 285
V ++ L+ GF G+ +KAV FN M P++ T LI V +A +V++
Sbjct: 247 VNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLS 306
Query: 286 AMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSN 345
+ + P++ + N +I Y + + +AR + ++ R + PD +T+ ++S LC S
Sbjct: 307 KVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG 366
Query: 346 MMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-----YT 400
D + H + D T ++L + + + +A+ +L+ M A YT
Sbjct: 367 KFDLVPRITHGI---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYT 423
Query: 401 SKLDAICN 408
L A+C
Sbjct: 424 VYLSALCR 431
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 137/359 (38%), Gaps = 21/359 (5%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P +F IL R A + + GI+ + ++L++ F G A +
Sbjct: 210 PNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDL 269
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
K+++ P+ T+L+KG G + A V+++G + V +I+
Sbjct: 270 FNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDI----VLCNLMIH 325
Query: 167 ELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
+G A ++ +E+ D + +I+ S+C +S +DL + RI+
Sbjct: 326 TYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC----LSGKFDL-----VPRITH 376
Query: 225 ------DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVK 278
D+ T N L F G A+ ++M ++ D T + ALC+ +
Sbjct: 377 GIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPR 436
Query: 279 QANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMI 338
A + +IK + ++ +ID + + A L DV +Y + I
Sbjct: 437 AAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAI 496
Query: 339 SWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
L + ++EA SL M I P+ TY +I G +L E G+
Sbjct: 497 KGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGV 555
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 142/323 (43%), Gaps = 6/323 (1%)
Query: 76 ELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEI 135
E +G A D T +++ + SVL ++ + T T MK E
Sbjct: 186 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMET-FTIAMKAFAAAKER 244
Query: 136 RSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT-DVQMY 194
+ A+ + +K F+ V+ ++ L++ L A L +++E T ++ Y
Sbjct: 245 KKAVGIFELMKKYKFKIGVETINC----LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTY 300
Query: 195 NTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKM 254
++ C + + +A ++N+M+ + PD+ +N ++ G + A+ F+VMK
Sbjct: 301 TVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS 360
Query: 255 ENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTK 314
+ P+V + +I CK+ ++ A M+ + ++P+ +Y LI G+ ++
Sbjct: 361 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 420
Query: 315 ARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIE 374
L M +G PD TYN +I + M + +++ M +I+P T++++++
Sbjct: 421 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMK 480
Query: 375 GWLNLPHYMHAINLLAEMCSNGI 397
+ +Y + EM GI
Sbjct: 481 SYFVARNYEMGRAVWDEMIKKGI 503
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 146/348 (41%), Gaps = 8/348 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+N+++ L + + T VS+ +++ KG+ + T TI + F A + +
Sbjct: 197 YNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMK 255
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
K ++ + L+ L + A D +K + F + +TY L+N C V
Sbjct: 256 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER---FTPN--MMTYTVLLNGWCRV 310
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
A ++ + + D+ +N +++ + SDA L++ M K P+V +Y
Sbjct: 311 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 370
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
+I FC + A+ +F+ M ++PD + LI ++K+ ++ M +
Sbjct: 371 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 430
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
P+ YN LI + + M + P +HT+N+++ + +
Sbjct: 431 KGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEM 490
Query: 350 AMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
+++ M K I PD +Y++LI G ++ A L EM G+
Sbjct: 491 GRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 538
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 133/337 (39%), Gaps = 38/337 (11%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
+ E AV F M + + N +L SL R A L +L+ + P++ T
Sbjct: 241 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMT 299
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
T+L+N +C + + A + ++ +PD A +++GL + + AI +K
Sbjct: 300 YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMK 359
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKC 206
+KG C +V+ Y +I+ C+
Sbjct: 360 SKG------------------PC-------------------PNVRSYTIMIRDFCKQSS 382
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+ A + +++M+ + PD Y LI GF +L M+ + PD T +
Sbjct: 383 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 442
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
LI + ++ + + MI+ +EP++ +N ++ Y + R + M +G
Sbjct: 443 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 502
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIK 363
+ PD ++Y ++I L + EA M K +K
Sbjct: 503 ICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 539
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 109/266 (40%), Gaps = 6/266 (2%)
Query: 39 NMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLG 98
+ L R P + + +L R+ + A + + G+ PDI +++
Sbjct: 287 DKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSM 346
Query: 99 RMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVS 158
+ + A + + + P+ + T +++ C + +AI + DD+ G Q +
Sbjct: 347 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD----A 402
Query: 159 VTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNE 216
Y LI + +LL++++E+ D + YN +IK M K +YN+
Sbjct: 403 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 462
Query: 217 MLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERK 276
M+ I P + T+N ++ + ++ M + I PD ++ LI L E K
Sbjct: 463 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 522
Query: 277 VKQANSVVAAMIKASVEPNVFIYNTL 302
++A + M+ ++ + YN
Sbjct: 523 SREACRYLEEMLDKGMKTPLIDYNKF 548
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 50/267 (18%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
D + YN+++ + + + + EM K + + T+ + F A + +KAVG F
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIF 251
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
+MK K V T + L+ +L + + K+A +++ L
Sbjct: 252 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ---------------VLFDKL------- 289
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
K RF TP++ TY ++++ C + EA +++ M +KPD +
Sbjct: 290 ----KERF----------TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAH 335
Query: 370 SILIEGWLNLPHYMHAINLLAEM-----CSNGIAYTSKLDAICNDYNFDDEIEKFMRYKE 424
++++EG L AI L M C N +YT + C + + IE F +
Sbjct: 336 NVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 395
Query: 425 TGGDADFLIASHIVLRNPSFKATGFGT 451
+G D + + ++ TGFGT
Sbjct: 396 SGLQPDAAVYTCLI--------TGFGT 414
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 141/344 (40%), Gaps = 11/344 (3%)
Query: 73 QQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLN 132
+++ KG+ L+ FC G A + ++ K+ + +T TLM +
Sbjct: 333 EKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKS 392
Query: 133 GEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTD 190
I +++ KG + + TY L++ + LLR++E+ +
Sbjct: 393 NHIEEVEGLFTEMRDKGLKPS----AATYNILMDAYARRMQPDIVETLLREMEDLGLEPN 448
Query: 191 VQMYNTIIKSMCEDKCVSD-AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
V+ Y +I + K +SD A D + M + P +Y LI+ + G KA F
Sbjct: 449 VKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASF 508
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
M E IKP V T ++ A + + + M++ ++ YNTL+DG+
Sbjct: 509 EEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQ 568
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
+AR + + G+ P V TYN++++ + L M ++KPD+ TY
Sbjct: 569 GLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITY 628
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGIA----YTSKLDAICND 409
S +I ++ + + A M +G KL AI D
Sbjct: 629 STMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILED 672
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 102/263 (38%), Gaps = 42/263 (15%)
Query: 185 EEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRK 244
+EE DV++YN I + + DA+++Y M + PD T LI G+ K
Sbjct: 267 KEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAK 326
Query: 245 AV-GFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLI 303
V F M + +K L+ + C E ++A + M K + N +YNTL+
Sbjct: 327 EVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLM 386
Query: 304 DGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMI------------------------- 338
D Y N + + L M +G+ P TYNI++
Sbjct: 387 DAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLE 446
Query: 339 ----SWLC-------TSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAIN 387
S+ C T M D A F M +KP + +Y+ LI + + A
Sbjct: 447 PNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYA 506
Query: 388 LLAEMCSNGI-----AYTSKLDA 405
EMC GI YTS LDA
Sbjct: 507 SFEEMCKEGIKPSVETYTSVLDA 529
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 8/225 (3%)
Query: 158 SVTYRFLINELCEVGETGAAL-QLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLY 214
+VT LI L + G + + ++ ++ E+ ++ ++KS C++ +A +
Sbjct: 308 NVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQ 367
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
EM K I + YNTL+ + + + G F M+ + +KP +T + L+ A +
Sbjct: 368 TEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARR 427
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA---RFLSHTMATRGVTPDV 331
+ +++ M +EPNV Y LI Y +M+ FL M G+ P
Sbjct: 428 MQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLR--MKKVGLKPSS 485
Query: 332 HTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
H+Y +I S ++A + F M + IKP ETY+ +++ +
Sbjct: 486 HSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAF 530
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 116/269 (43%), Gaps = 7/269 (2%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F M P +N ++ + R +L +++E G+ P++ + T LI+ +
Sbjct: 402 FTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGR 461
Query: 97 LGRM-NYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVD 155
+M + A ++ K +P + + T L+ ++G A +++ +G + V+
Sbjct: 462 TKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVE 521
Query: 156 RVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQ--MYNTIIKSMCEDKCVSDAYDL 213
TY +++ G+TG +++ + + E YNT++ + +A D+
Sbjct: 522 ----TYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDV 577
Query: 214 YNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCK 273
+E + P V TYN L+ + GGQ K M N+KPD T +I+A +
Sbjct: 578 VSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVR 637
Query: 274 ERKVKQANSVVAAMIKASVEPNVFIYNTL 302
R K+A M+K+ P+ Y L
Sbjct: 638 VRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 130/319 (40%), Gaps = 8/319 (2%)
Query: 83 DIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGE-IRSAINF 141
D+ I+ R + A+ V + K PD L+ L G +
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 142 HDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIK 199
+ + KG ++ D + L+ C+ G AL + ++E++ ++ +YNT++
Sbjct: 332 FEKMSEKGVKWSQD----VFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMD 387
Query: 200 SMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKP 259
+ + + + L+ EM K + P TYN L+ + Q M+ ++P
Sbjct: 388 AYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEP 447
Query: 260 DVSTCDPLIHALCKERKVKQ-ANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFL 318
+V + LI A + +K+ A M K ++P+ Y LI Y + KA
Sbjct: 448 NVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYAS 507
Query: 319 SHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLN 378
M G+ P V TY ++ S + M ++ M + IK TY+ L++G+
Sbjct: 508 FEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAK 567
Query: 379 LPHYMHAINLLAEMCSNGI 397
Y+ A ++++E G+
Sbjct: 568 QGLYIEARDVVSEFSKMGL 586
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 122/289 (42%), Gaps = 11/289 (3%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+N ++ + + NH L ++ KG+ P AT IL++ + + + ++L ++
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREME 441
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+P+ + T L+ G + + D + + + S +Y LI+
Sbjct: 442 DLGLEPNVKSYTCLISAY---GRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVS 498
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
G A ++ +E V+ Y +++ + +++ ML ++I TY
Sbjct: 499 GWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITY 558
Query: 230 NTLIYGFCAGG---QLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAA 286
NTL+ GF G + R V F+ M ++P V T + L++A + + + ++
Sbjct: 559 NTLLDGFAKQGLYIEARDVVSEFSKM---GLQPSVMTYNMLMNAYARGGQDAKLPQLLKE 615
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYN 335
M +++P+ Y+T+I + + +A F M G PD +Y
Sbjct: 616 MAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYE 664
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 1/194 (0%)
Query: 171 VGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYN 230
V E+ Q ++ + E T ++ YN++ K + A +N+M+ + + P TYN
Sbjct: 201 VQESVKIFQKMKDLGVERT-IKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYN 259
Query: 231 TLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKA 290
+++GF +L A+ FF MK I PD +T + +I+ C+ +K+ +A + M
Sbjct: 260 LMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGN 319
Query: 291 SVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEA 350
+ P+V Y T+I GY ++++ + M + G+ P+ TY+ ++ LC + M EA
Sbjct: 320 KIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEA 379
Query: 351 MSLFHYMDLKDIKP 364
++ M K I P
Sbjct: 380 KNILKNMMAKHIAP 393
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 8/240 (3%)
Query: 177 ALQLLRQIEEE---HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLI 233
ALQ R E D + +IK + E ++ A + +M K + D + LI
Sbjct: 133 ALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLI 192
Query: 234 YGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVE 293
+ G ++++V F MK ++ + + + L + + + A M+ VE
Sbjct: 193 ESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVE 252
Query: 294 PNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSL 353
P YN ++ G+ L ++ A M TRG++PD T+N MI+ C MDEA L
Sbjct: 253 PTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKL 312
Query: 354 FHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICN 408
F M I P +Y+ +I+G+L + + + EM S+GI Y++ L +C+
Sbjct: 313 FVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCD 372
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/382 (18%), Positives = 154/382 (40%), Gaps = 16/382 (4%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCH 96
F+ M+S P +N +L TA+ + ++ +GI+PD AT +IN FC
Sbjct: 243 FNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCR 302
Query: 97 LGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR 156
+M+ A + ++ P + TT++KG + + +++++ G ++
Sbjct: 303 FKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSG----IEP 358
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEEH---TDVQMYNTIIKSMCEDKCVSDAYDL 213
+ TY L+ LC+ G+ A +L+ + +H D ++ ++ S + ++ A ++
Sbjct: 359 NATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEV 418
Query: 214 YNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM--------KMENIKPDVSTCD 265
M + + Y LI C +A+ + + + ++ + S +
Sbjct: 419 LKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYN 478
Query: 266 PLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATR 325
P+I LC + +A + ++K V+ + N LI G+ + + M+ R
Sbjct: 479 PIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDAL-NNLIRGHAKEGNPDSSYEILKIMSRR 537
Query: 326 GVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHA 385
GV + + Y ++I + +A + M PD+ + +IE A
Sbjct: 538 GVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTA 597
Query: 386 INLLAEMCSNGIAYTSKLDAIC 407
++ M + +D I
Sbjct: 598 SRVMMIMIDKNVGIEDNMDLIA 619
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/431 (19%), Positives = 171/431 (39%), Gaps = 31/431 (7%)
Query: 3 LFRSRFLSIPSLFMRYHSHSPRPFSH-------------EAVNAVSSFHNMLSMRPAPPI 49
L R R++ F + S P H A+ F +M + +P
Sbjct: 231 LRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDD 290
Query: 50 TQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGK 109
FN ++ R A L +++ I P + + T +I + + R++ + +
Sbjct: 291 ATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEE 350
Query: 110 ILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELC 169
+ +P+ T +TL+ GLC G++ A N ++ AK + + S+ + L+++
Sbjct: 351 MRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDN--SIFLKLLVSQ-S 407
Query: 170 EVGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCEDKCVSDAYDLYNEMLLKRI----- 222
+ G+ AA ++L+ + + + Y +I++ C+ + A L + ++ K I
Sbjct: 408 KAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQ 467
Query: 223 ---SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQ 279
+ YN +I C GQ KA F + ++ D + LI KE
Sbjct: 468 DTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDS 526
Query: 280 ANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMIS 339
+ ++ M + V Y LI Y + A+ +M G PD + +I
Sbjct: 527 SYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIE 586
Query: 340 WLCTSNMMDEAMSLFHYMDLKD--IKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
L + A + M K+ I+ + + + ++E L H A+ + + NG
Sbjct: 587 SLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNG- 645
Query: 398 AYTSKLDAICN 408
+T+ LD++ +
Sbjct: 646 -HTADLDSLLS 655
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 141/377 (37%), Gaps = 20/377 (5%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
+V F M + I +N++ ++R Y A ++ +G+ P T +++
Sbjct: 204 SVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLW 263
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
F R+ A + R PD T++ G C ++ A ++K
Sbjct: 264 GFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGP 323
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDA 210
V V+Y +I V L++ ++ + Y+T++ +C+ + +A
Sbjct: 324 SV----VSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEA 379
Query: 211 YDLYNEMLLKRISP-DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
++ M+ K I+P D + L+ G + A M N+ + LI
Sbjct: 380 KNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIE 439
Query: 270 ALCKERKVKQANSVVAAMIKASV----------EPNVFIYNTLIDGYCLINQMTKARFLS 319
CK +A ++ +I+ + EP+ YN +I+ C Q KA L
Sbjct: 440 NQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSA--YNPIIEYLCNNGQTAKAEVLF 497
Query: 320 HTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNL 379
+ RGV D N +I D + + M + + ++ Y +LI+ +++
Sbjct: 498 RQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSK 556
Query: 380 PHYMHAINLLAEMCSNG 396
A L M +G
Sbjct: 557 GEPGDAKTALDSMVEDG 573
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 131/327 (40%), Gaps = 42/327 (12%)
Query: 114 AYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGE 173
+Y P + L K L + + S +K +D T F+I + + G
Sbjct: 106 SYTPTSMEYEELAKSLASHKKYESMWKILKQMK----DLSLDISGETLCFIIEQYGKNGH 161
Query: 174 TGAALQLLRQIEEE---HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYN 230
A++L + + V +YN+++ ++C+ K AY L M+ K + PD TY
Sbjct: 162 VDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYA 221
Query: 231 TLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKA 290
L+ G+C+ G++++A F + M P D LI L ++ A +V+ M K
Sbjct: 222 ILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKG 281
Query: 291 SVEPNVFIYNTLID---------------------GYCL--------------INQMTKA 315
P++ +N LI+ G C+ I ++ +A
Sbjct: 282 GFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEA 341
Query: 316 RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
L + G P Y +I +C + M D+A S F M +K P+ Y++LI
Sbjct: 342 FRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITM 401
Query: 376 WLNLPHYMHAINLLAEMCSNGIAYTSK 402
++ A N L EM G+ S+
Sbjct: 402 CGRGGKFVDAANYLVEMTEMGLVPISR 428
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 6/256 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+N++L +L + + A +L +++ KG+ PD T IL+N +C G+M A L ++
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMS 244
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+R + P L++GL G + SA + GF + T+ LI + +
Sbjct: 245 RRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQ----TFNILIEAISKS 300
Query: 172 GETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
GE +++ + D+ Y T+I ++ + + +A+ L N + P Y
Sbjct: 301 GEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLY 360
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
+I G C G A FF+ MK++ P+ LI + K A + + M +
Sbjct: 361 APIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTE 420
Query: 290 ASVEPNVFIYNTLIDG 305
+ P ++ + DG
Sbjct: 421 MGLVPISRCFDMVTDG 436
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 113/272 (41%), Gaps = 12/272 (4%)
Query: 158 SVTYRFLINELCEVGETGAALQLLRQIEEEHTDV--QMYNTIIKSMCEDKCVSDAYDLYN 215
S+ Y L L + + ++L+Q+++ D+ + II+ ++ V A +L+N
Sbjct: 111 SMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFN 170
Query: 216 ---EMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALC 272
+ L + + DV YN+L++ C A M + +KPD T L++ C
Sbjct: 171 GVPKTLGCQQTVDV--YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 273 KERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVH 332
K+K+A + M + P + LI+G + A+ + M G PD+
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQ 288
Query: 333 TYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
T+NI+I + S ++ + +++ + D +TY LI + A LL
Sbjct: 289 TFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNC 348
Query: 393 CSNG-----IAYTSKLDAICNDYNFDDEIEKF 419
+G Y + +C + FDD F
Sbjct: 349 VEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFF 380
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 139/319 (43%), Gaps = 6/319 (1%)
Query: 78 KGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRS 137
K I P+ T+ I+I C GR+ +L +I + P T+L+ + I
Sbjct: 228 KRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEE 287
Query: 138 AINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQ--MYN 195
+++ + K VD ++ Y ++ + G+ +A ++ ++ + +Y
Sbjct: 288 SMSLLKRLLMKNMV--VD--TIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYT 343
Query: 196 TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME 255
++ CE V +A L +EM +SP T+N LI GF G K + + VM
Sbjct: 344 VFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTR 403
Query: 256 NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA 315
+ P S + ++ ++ K V +AN ++ I P+ Y+ LI G+ N + +A
Sbjct: 404 GLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQA 463
Query: 316 RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
L + M R ++P + +I LCT ++ M + I+P+A+ Y LI+
Sbjct: 464 LKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKA 523
Query: 376 WLNLPHYMHAINLLAEMCS 394
+ + +A + EM S
Sbjct: 524 FQKIGDKTNADRVYNEMIS 542
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 86/203 (42%)
Query: 195 NTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKM 254
NT+I + K + +Y + KRI P+ T +I C G+L++ V + +
Sbjct: 203 NTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICG 262
Query: 255 ENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTK 314
+ P V L+ + +E +++++ S++ ++ ++ + Y+ ++ +
Sbjct: 263 KRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVS 322
Query: 315 ARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIE 374
AR + M RG + + Y + + C + EA L M+ + P ET++ LI
Sbjct: 323 ARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIG 382
Query: 375 GWLNLPHYMHAINLLAEMCSNGI 397
G+ + M + G+
Sbjct: 383 GFARFGWEEKGLEYCEVMVTRGL 405
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/200 (18%), Positives = 83/200 (41%)
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN 256
+I+ +C++ + + DL + + KR P V +L++ ++ +++ + M+N
Sbjct: 240 MIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKN 299
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKAR 316
+ D +++A KE + A V M++ N F+Y + C + +A
Sbjct: 300 MVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAE 359
Query: 317 FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
L M GV+P T+N +I ++ + M + + P ++ +++
Sbjct: 360 RLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSV 419
Query: 377 LNLPHYMHAINLLAEMCSNG 396
+ + A +L + G
Sbjct: 420 SKIENVNRANEILTKSIDKG 439
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 139/322 (43%), Gaps = 14/322 (4%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
N ++ ++ A + + E G P+ T + + C M++A SV K+L
Sbjct: 234 LNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKML 293
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRF---LINEL 168
K + + ++ C G+ A + ++ K K S+ RF LI L
Sbjct: 294 KSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTK-------EKSLPPRFVATLITAL 346
Query: 169 CE-VGETGAALQLLRQI--EEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPD 225
C+ G A ++L + E ++ ++ +I S+C + V DA L +M+ K +P
Sbjct: 347 CKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPG 406
Query: 226 VFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVA 285
+N +++ G L +A +M+ +KPDV T +I K + +A ++A
Sbjct: 407 NAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILA 466
Query: 286 AMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSN 345
K + + Y+ LI GYC I + +A L + M GV P+ YN +I C
Sbjct: 467 EAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKA 526
Query: 346 M-MDEAMSLFHYMDLKDIKPDA 366
+ ++A LF M K + +A
Sbjct: 527 LDWEKAEVLFEEMKQKGLHLNA 548
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 128/317 (40%), Gaps = 40/317 (12%)
Query: 83 DIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFH 142
++ L LI F LG+ AF V K + + P+ ++ LC RS +++
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALC----KRSFMDWA 285
Query: 143 DDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMC 202
SV + L + + GE QM N II C
Sbjct: 286 --------------CSVCEKMLKSGVLSEGE------------------QMGN-IITWFC 312
Query: 203 EDKCVSDAYDLYNEMLLKRIS-PDVFTYNTLIYGFCAG-GQLRKAVGFFNVMKMENIKPD 260
++ +AY +Y K S P F TLI C G + A + E +
Sbjct: 313 KEGKAEEAYSVYELAKTKEKSLPPRFVA-TLITALCKNDGTITFAQEMLGDLSGEARRRG 371
Query: 261 VSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSH 320
+ +IH+LC+ R VK A +++ MI P ++N ++ + +A+ +
Sbjct: 372 IKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLK 431
Query: 321 TMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLP 380
M +RG+ PDV+TY ++IS MMDEA + K K TY LI G+ +
Sbjct: 432 LMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIE 491
Query: 381 HYMHAINLLAEMCSNGI 397
Y A+ LL EM G+
Sbjct: 492 EYDEALKLLNEMDRFGV 508
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Query: 39 NMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLG 98
+M+S PAP FN ++ + + A + + +E +G+ PD+ T T++I+ + G
Sbjct: 397 DMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGG 456
Query: 99 RMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVS 158
M+ A +L + K+ + L++G C E A+ +++ G Q D
Sbjct: 457 MMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADE-- 514
Query: 159 VTYRFLINELC 169
Y LI C
Sbjct: 515 --YNKLIQSFC 523
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 131/276 (47%), Gaps = 15/276 (5%)
Query: 160 TYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEM 217
T+ L++ + A +LR ++E D ++Y T+I S + V ++++++M
Sbjct: 469 TFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQM 528
Query: 218 LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
+ ++ T+ LI G GQ+ KA G + +++ +N+KPD + LI A + V
Sbjct: 529 SNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAV 588
Query: 278 KQANSVVAAMIKAS--VEPNVFIYNTLIDGYCLINQMTKAR---FLSHTMATRGVTPDVH 332
+A V+A M + ++P+ L+ C Q+ +A+ + H RG TP+V
Sbjct: 589 DRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG-TPEV- 646
Query: 333 TYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
Y I ++ S D A S++ M KD+ PD +S LI+ + A +L +
Sbjct: 647 -YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDA 705
Query: 393 CSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYK 423
S G I+Y+S + A CN ++ +E + + K
Sbjct: 706 KSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIK 741
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 147/359 (40%), Gaps = 14/359 (3%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P ++ FN ++ A + + ++ G+ D T LI+ G+++ F V
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
++ + + L+ G G++ A + +++K + DRV + LI+
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSK--NVKPDRV--VFNALIS 580
Query: 167 ELCEVGETGAALQLLRQIEEE----HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLK-- 220
+ G A +L +++ E D ++K+ C V A ++Y +M+ K
Sbjct: 581 ACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVY-QMIHKYG 639
Query: 221 -RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQ 279
R +P+V+T + G A + MK +++ PD LI + + +
Sbjct: 640 IRGTPEVYTI--AVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDE 697
Query: 280 ANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMIS 339
A ++ + Y++L+ C KA L + + + P + T N +I+
Sbjct: 698 AFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALIT 757
Query: 340 WLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA 398
LC N + +AM + +KP+ TYS+L+ + + LL++ +G++
Sbjct: 758 ALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVS 816
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 120/297 (40%), Gaps = 23/297 (7%)
Query: 166 NELCEVGETGAALQLLRQIEEEH---TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRI 222
N L G + LL +++ D + + K+ + + V +A+ + +++L
Sbjct: 408 NRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFR-FTKLIL--- 463
Query: 223 SPDVFTYNTLIYGFCAGGQ-LRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
+P + T+N L+ CA Q + A G +++ + D LI + K KV
Sbjct: 464 NPTMSTFNMLM-SVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
V M + VE N+ + LIDG Q+ KA + ++ V PD +N +IS
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 342 CTSNMMDEAMSLFHYM--DLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAY 399
S +D A + M + I PD + L++ N A + + GI
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 400 TSKLDAIC-------NDYNFDDEIEKFMRYKETGGDADFL-----IASHIVLRNPSF 444
T ++ I D++F I K M+ K+ D F +A H + + +F
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAF 699
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 158/410 (38%), Gaps = 16/410 (3%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A + F ML FN ++ + H A SL +++E KGI+PD T IL+
Sbjct: 323 DAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILL 382
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ G + A KI K PDT ++ LC + ++ +
Sbjct: 383 SLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIR 442
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNT----IIKSMCEDKCV 207
V V + +NE G +Q E D + +T +I E
Sbjct: 443 IDEHSVPVIMQMYVNE-------GLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLW 495
Query: 208 SDAYDL-YNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+A + Y + + DV YN +I + KA+ F MK + PD T +
Sbjct: 496 VEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNS 555
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
L L V +A ++A M+ + +P Y +I Y + ++ A L M G
Sbjct: 556 LFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTG 615
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
V P+ Y +I+ S M++EA+ F M+ ++ + + LI+ + + A
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEAR 675
Query: 387 NLLAEMC-SNG---IAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFL 432
+ +M S G +A ++ + ++C D E E G D +
Sbjct: 676 RVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVI 725
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 174/401 (43%), Gaps = 21/401 (5%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
+ ++N ++ + + + A+SL + ++ +G PD T L + ++ A +L
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
++L +P ++ G + A++ ++ ++ G V V Y LIN
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTG----VKPNEVVYGSLINGF 630
Query: 169 CEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
E G A+Q R +EE ++ + ++IK+ + C+ +A +Y++M PDV
Sbjct: 631 AESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDV 690
Query: 227 FTYNTLIYGFCAG-GQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVA 285
N+++ CA G + +A FN ++ E DV + +++ + +A V
Sbjct: 691 AASNSML-SLCADLGIVSEAESIFNALR-EKGTCDVISFATMMYLYKGMGMLDEAIEVAE 748
Query: 286 AMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTM-ATRGVTPDVHTYNIMISWLCTS 344
M ++ + + +N ++ Y Q+++ L H M R + D T+ + + L
Sbjct: 749 EMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKG 808
Query: 345 NMMDEAMSLFH--YMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI----- 397
+ EA+S Y + K + A T ++ L Y +A+ E+ S I
Sbjct: 809 GVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGL----YAYALESCQELTSGEIPREHF 864
Query: 398 AYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
AY + + + D ++ +MR +E G + D + +++V
Sbjct: 865 AYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLV 905
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/438 (20%), Positives = 160/438 (36%), Gaps = 88/438 (20%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + +N +L +L R + ++ G+ P T +L++ + G + A
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 202
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSV------- 159
+ + +R + PD + T+++ +GE A F A +D +
Sbjct: 203 IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSA 262
Query: 160 -----TYRFLINELCEVGETGAALQLLRQIEEEHTD------VQMYNTIIKSMCEDKCVS 208
+FL EL +VG + L + +NT+I + ++
Sbjct: 263 QSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLN 322
Query: 209 DAYDLYNEMLL-----------------------------------KRISPDVFTYNTLI 233
DA +L++EML K ISPD TYN L+
Sbjct: 323 DAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILL 382
Query: 234 YGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVE 293
G + A+ ++ ++ + PD T ++H LC+ + V + +V+A M + S+
Sbjct: 383 SLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIR 442
Query: 294 PNVFIYNTLIDGYCLINQMTKARFL-----------SHTMAT------------------ 324
+ ++ Y + +A+ L S T+A
Sbjct: 443 IDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVF 502
Query: 325 ------RGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLN 378
G DV YN+MI + + ++A+SLF M + PD TY+ L +
Sbjct: 503 YGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAG 562
Query: 379 LPHYMHAINLLAEMCSNG 396
+ A +LAEM +G
Sbjct: 563 VDLVDEAQRILAEMLDSG 580
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/355 (19%), Positives = 139/355 (39%), Gaps = 20/355 (5%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+AV + M P + +++ A+ + +E G+ + LT LI
Sbjct: 603 DAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLI 662
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLN-GEIRSAINFHDDVKAKGF 150
+ +G + A V K+ PD A +++ LC + G + A + + ++ KG
Sbjct: 663 KAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLS-LCADLGIVSEAESIFNALREKGT 721
Query: 151 QFQVDRVSVTYRF----LINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKC 206
+ ++ Y + +++E EV E LL +D +N ++ D
Sbjct: 722 CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLL-------SDCTSFNQVMACYAADGQ 774
Query: 207 VSDAYDLYNEMLLKR-ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCD 265
+S+ +L++EML++R + D T+ TL GG +AV E KP
Sbjct: 775 LSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNE-AKP---LAT 830
Query: 266 PLIHALCKERKVKQANSVVA--AMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMA 323
P I A A ++ + + + F YN +I Y + A M
Sbjct: 831 PAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQ 890
Query: 324 TRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLN 378
+G+ PD+ T ++ + M++ + + +++P + + + +++
Sbjct: 891 EKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVS 945
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 125/277 (45%), Gaps = 5/277 (1%)
Query: 122 LTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLL 181
T MK E + A+ + +K F+ V+ ++ L++ L A L
Sbjct: 232 FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINC----LLDSLGRAKLGKEAQVLF 287
Query: 182 RQIEEEHT-DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGG 240
+++E T ++ Y ++ C + + +A ++N+M+ + PD+ +N ++ G
Sbjct: 288 DKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSM 347
Query: 241 QLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYN 300
+ A+ F+VMK + P+V + +I CK+ ++ A M+ + ++P+ +Y
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 301 TLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLK 360
LI G+ ++ L M +G PD TYN +I + M + +++ M
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 467
Query: 361 DIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
+I+P T++++++ + +Y + EM GI
Sbjct: 468 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGI 504
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 133/337 (39%), Gaps = 38/337 (11%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
+ E AV F M + + N +L SL R A L +L+ + P++ T
Sbjct: 242 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMT 300
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
T+L+N +C + + A + ++ +PD A +++GL + + AI +K
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMK 360
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKC 206
+KG C +V+ Y +I+ C+
Sbjct: 361 SKG------------------PC-------------------PNVRSYTIMIRDFCKQSS 383
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
+ A + +++M+ + PD Y LI GF +L M+ + PD T +
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
LI + ++ + + MI+ +EP++ +N ++ Y + R + M +G
Sbjct: 444 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 503
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIK 363
+ PD ++Y ++I L + EA M K +K
Sbjct: 504 ICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 540
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 147/349 (42%), Gaps = 10/349 (2%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+N+++ L + + T VS+ +++ KG+ + T TI + F A + +
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
K ++ + L+ L + A D +K + F + +TY L+N C V
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER---FTPN--MMTYTVLLNGWCRV 311
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
A ++ + + D+ +N +++ + SDA L++ M K P+V +Y
Sbjct: 312 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
+I FC + A+ +F+ M ++PD + LI ++K+ ++ M +
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYN-IMISWLCTSNMMD 348
P+ YN LI + + M + P +HT+N IM S+ N +
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN-YE 490
Query: 349 EAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
+++ M K I PD +Y++LI G ++ A L EM G+
Sbjct: 491 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 109/266 (40%), Gaps = 6/266 (2%)
Query: 39 NMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLG 98
+ L R P + + +L R+ + A + + G+ PDI +++
Sbjct: 288 DKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSM 347
Query: 99 RMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVS 158
+ + A + + + P+ + T +++ C + +AI + DD+ G Q +
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD----A 403
Query: 159 VTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNE 216
Y LI + +LL++++E+ D + YN +IK M K +YN+
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 463
Query: 217 MLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERK 276
M+ I P + T+N ++ + ++ M + I PD ++ LI L E K
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 523
Query: 277 VKQANSVVAAMIKASVEPNVFIYNTL 302
++A + M+ ++ + YN
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDYNKF 549
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 49/229 (21%)
Query: 228 TYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
T+ + F A + +KAVG F +MK K V T + L+ +L + + K+A
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ------ 284
Query: 288 IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMM 347
+++ L K RF TP++ TY ++++ C +
Sbjct: 285 ---------VLFDKL-----------KERF----------TPNMMTYTVLLNGWCRVRNL 314
Query: 348 DEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM-----CSNGIAYTSK 402
EA +++ M +KPD +++++EG L AI L M C N +YT
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 403 LDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIVLRNPSFKATGFGT 451
+ C + + IE F ++G D + + ++ TGFGT
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI--------TGFGT 415
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 144/317 (45%), Gaps = 4/317 (1%)
Query: 29 EAVNAVSSFHNMLSMRPAPP-ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATL 87
++++A+S +L P + +N ++ + R ++ + +++ +G+ PD T
Sbjct: 888 QSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTF 947
Query: 88 TILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKA 147
L++ + + + L ++ + +P+ +L + LC NG+++ A++ +++
Sbjct: 948 NFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMES 1007
Query: 148 KGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCV 207
KG+ SV ++ L GE A L ++ Y+ IIK + + +
Sbjct: 1008 KGWNLGS---SVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNL 1064
Query: 208 SDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPL 267
A L N ML + P +Y+++I G QL KA+ F M + P +ST L
Sbjct: 1065 DIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGL 1124
Query: 268 IHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGV 327
+H C+ +V ++ ++ +M+ P+ ++ T+ID + + KA + M G
Sbjct: 1125 VHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGY 1184
Query: 328 TPDVHTYNIMISWLCTS 344
D T+ +IS + +S
Sbjct: 1185 EVDFETHWSLISNMSSS 1201
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 133/327 (40%), Gaps = 31/327 (9%)
Query: 83 DIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFH 142
D T T LI CFC +N +V G + PD L L G + +
Sbjct: 633 DNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQL- 691
Query: 143 DDVKAKGFQFQVDRVSVTY--------RFLINELCEVGETGAALQLLRQIEEEH--TDVQ 192
+RV ++Y R + +L +G + A +++++E E + +
Sbjct: 692 -----------FERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQE 740
Query: 193 MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
+YN +IK +C +K S A+ + +EML K+ P + + LI C + KA FN+
Sbjct: 741 VYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLC---RANKAGTAFNLA 797
Query: 253 KMENIKPDVSTCD-PLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQ 311
+ + D S LI L K+ A + + M+ + IYN + GYC N
Sbjct: 798 E----QIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNN 853
Query: 312 MTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAE-TYS 370
K + M + + V +Y + +C A+SL ++ L + P Y+
Sbjct: 854 WMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYN 913
Query: 371 ILIEGWLNLPHYMHAINLLAEMCSNGI 397
+LI +++ +L EM G+
Sbjct: 914 MLIFYMFRAKNHLEVNKVLLEMQGRGV 940
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 116/274 (42%), Gaps = 12/274 (4%)
Query: 136 RSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLL-----RQIEEEHTD 190
R A+ D ++ KG ++ Y+ LI++L V T +A ++ + E H +
Sbjct: 200 RKAVMLFDWMRRKGLV----PLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMN 255
Query: 191 VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFN 250
+ +I+ +C D+ V +A L +++ + Y+ + G+ + F
Sbjct: 256 IDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIG 315
Query: 251 VMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLIN 310
+K E PDV + ++H+LC+ ++A + + + + + LI C
Sbjct: 316 EVKYE---PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEG 372
Query: 311 QMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
+ +A + ++G PDV++YN ++S L + + M + T+
Sbjct: 373 DIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFK 432
Query: 371 ILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKLD 404
I++ G+ + A ++ +M G+ SK++
Sbjct: 433 IMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVE 466
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 140/382 (36%), Gaps = 63/382 (16%)
Query: 32 NAVSSFHNMLS----MRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATL 87
N F ++LS ++ P + N IL SL R A ++LE G D T
Sbjct: 302 NEKQDFEDLLSFIGEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTF 361
Query: 88 TILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKA 147
ILI C+ G + A L +I+ + Y+PD + ++ GL G + D++K
Sbjct: 362 GILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKE 421
Query: 148 KGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQM---YNTIIKSMCED 204
G + T++ ++ C+ RQ EE V Y I S ED
Sbjct: 422 NGMMLSLS----TFKIMVTGYCKA----------RQFEEAKRIVNKMFGYGLIEASKVED 467
Query: 205 KCVSDAYDLYN----EMLLKRISPDVFT-------------------------------- 228
+S+A+ L + LKR + F+
Sbjct: 468 P-LSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRS 526
Query: 229 ----YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERK-VKQANSV 283
+N+LI G L+ A+ + M K + L+ +LC R ++ + S+
Sbjct: 527 VLPEFNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISL 586
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
+ K + + + N L+ YC ++ + H M D TY +I C
Sbjct: 587 LEKWPKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCK 646
Query: 344 SNMMDEAMSLFHYMDLKDIKPD 365
+++ ++++ + PD
Sbjct: 647 KETLNDLLNVWGAAQNDNWLPD 668
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 120/330 (36%), Gaps = 44/330 (13%)
Query: 68 AVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMK 127
A S+ ++LE +G + LI C + + AF++L ++L + + P
Sbjct: 723 AHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSL-------- 774
Query: 128 GLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE 187
G CL LI LC + G A L QI+
Sbjct: 775 GSCL-------------------------------MLIPRLCRANKAGTAFNLAEQIDSS 803
Query: 188 HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVG 247
+ ++ +IK + + DA + ML +S YN + G+C G K
Sbjct: 804 Y----VHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEE 859
Query: 248 FFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEP-NVFIYNTLIDGY 306
+M +NI V + + +C E + A S+ ++ P V IYN LI
Sbjct: 860 VLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYM 919
Query: 307 CLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDA 366
+ + M RGV PD T+N ++ +S ++ M K +KP+
Sbjct: 920 FRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNN 979
Query: 367 ETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
+ + + A++L M S G
Sbjct: 980 RSLRAVTSSLCDNGDVKKALDLWQVMESKG 1009
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 122/282 (43%), Gaps = 14/282 (4%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV-LGKI 110
F +++G V AV L + KG+ P + ILI+ + R A+ + L +
Sbjct: 186 FCDLIGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWV 245
Query: 111 LKRAY--QPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQ---VDRVSVTYRFLI 165
RA + ++ +++ LCL+ +++ A + A G ++++ Y
Sbjct: 246 ETRAELNHMNIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYN--- 302
Query: 166 NELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPD 225
E + L + +++ E DV + N I+ S+C AY E+ D
Sbjct: 303 ----EKQDFEDLLSFIGEVKYE-PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQD 357
Query: 226 VFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVA 285
T+ LI C G +++AV + + + + KPDV + + ++ L ++ + + ++
Sbjct: 358 EVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILD 417
Query: 286 AMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGV 327
M + + ++ + ++ GYC Q +A+ + + M G+
Sbjct: 418 EMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGL 459
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
D++ YN +IK CE S +Y + EM K I P+ ++ +I GF A + +
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
+MK + VST + I +LCK +K K+A +++ M+ A ++PN Y+ LI G+C
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNE 305
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
+ +A+ L M RG PD Y +I +LC + A+SL K+ P
Sbjct: 306 DDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIM 365
Query: 370 SILIEGWLNLPHYMHAINLLAEM 392
L+ G A L+ ++
Sbjct: 366 KSLVNGLAKDSKVEEAKELIGQV 388
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 170/417 (40%), Gaps = 45/417 (10%)
Query: 6 SRFLSIPSLFMRYHSHSPRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHY 65
SR S SLF R+ + SP+ + ++SS +LS P+T +L +
Sbjct: 5 SRIRSSTSLF-RHLNASPQ------IRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSE 57
Query: 66 PTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTL 125
+ + + PD C + R+ ++ +V K+ + +A++ L
Sbjct: 58 KDPDRILEICRAASLTPD-----------CRIDRIAFSAAVENLAEKKHF----SAVSNL 102
Query: 126 MKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIE 185
+ G N D+K++ F + L + +L++ R +E
Sbjct: 103 LDGFIEN---------RPDLKSERFAAHAIVLYAQANMLDH----------SLRVFRDLE 143
Query: 186 --EEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEM-LLKRISPDVFTYNTLIYGFCAGGQL 242
E V+ N ++ + K +A +Y EM + I PD+ TYN +I FC G
Sbjct: 144 KFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSA 203
Query: 243 RKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTL 302
+ M+ + IKP+ S+ +I E K + V+A M V V YN
Sbjct: 204 SSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIR 263
Query: 303 IDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDI 362
I C + +A+ L M + G+ P+ TY+ +I C + +EA LF M +
Sbjct: 264 IQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGC 323
Query: 363 KPDAETYSILIEGWLNLPHYMHAINLLAE-MCSNGIAYTSKLDAICNDYNFDDEIEK 418
KPD+E Y LI + A++L E M N + S + ++ N D ++E+
Sbjct: 324 KPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEE 380
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 116/269 (43%), Gaps = 8/269 (2%)
Query: 37 FHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQL-ELKGIAPDIATLTILINCFC 95
F ++ + + N +L + + Y A + ++ ++ GI PD+ T +I FC
Sbjct: 139 FRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFC 198
Query: 96 HLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVD 155
G + ++S++ ++ ++ +P++++ ++ G + +K +G V
Sbjct: 199 ESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVS 258
Query: 156 RVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDL 213
TY I LC+ ++ A LL + + Y+ +I C + +A L
Sbjct: 259 ----TYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKL 314
Query: 214 YNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCK 273
+ M+ + PD Y TLIY C GG A+ +N P S L++ L K
Sbjct: 315 FKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAK 374
Query: 274 ERKVKQANSVVAAMIKASVEPNVFIYNTL 302
+ KV++A ++ +K NV ++N +
Sbjct: 375 DSKVEEAKELI-GQVKEKFTRNVELWNEV 402
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 8/218 (3%)
Query: 168 LCEVGETG-------AALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLK 220
LC++ + G A +++ ++I + V +N ++++ C ++ + +A ++ E L
Sbjct: 146 LCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIF-EKLHS 204
Query: 221 RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQA 280
R +PDV T N L+ GF G + F++ M KP+ T I CK+R +A
Sbjct: 205 RFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEA 264
Query: 281 NSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISW 340
+ M + + V I TLI G + KAR L ++ RG+TPD YN ++S
Sbjct: 265 LRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSS 324
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLN 378
L + A+ + M+ K I+PD+ T+ + G +
Sbjct: 325 LMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMK 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 6/169 (3%)
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
L+ A C ER++K+A S+ + + P+V N L+ G+ +T H M RG
Sbjct: 182 LLRAFCTEREMKEARSIFEKL-HSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRG 240
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
P+ TY I I C EA+ LF MD D + + LI G + + A
Sbjct: 241 FKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKAR 300
Query: 387 NLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKFMRYKETGGDAD 430
L E+ G+ AY + + ++ + I+ +E G + D
Sbjct: 301 QLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPD 349
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 115/301 (38%), Gaps = 9/301 (2%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
+ +FN +L + A S+ ++L + PD+ T+ IL+ F G +
Sbjct: 176 VDEFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYH 234
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
+++KR ++P++ + G C A+ +D+ F V ++ LI+
Sbjct: 235 EMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTT----LIHGS 290
Query: 169 CEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
A QL +I + D YN ++ S+ + VS A + EM K I PD
Sbjct: 291 GVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDS 350
Query: 227 FTYNTLIYGFCAGGQ--LRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
T++++ G + ++ MK ++ P T L+ C +V +
Sbjct: 351 VTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLW 410
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
M++ P+ L C + A S RG Y ++ + L ++
Sbjct: 411 KYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSLSSN 470
Query: 345 N 345
N
Sbjct: 471 N 471
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 138/305 (45%), Gaps = 24/305 (7%)
Query: 105 SVLGKILK-----------RAYQP---DTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
S+LGK+ K R + P ++ L +++ C ++ AIN K
Sbjct: 169 SILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKL 228
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT-DVQMYNTIIKSMCED-KCVS 208
+ +D ++ L++ LC A L+ ++++ D + +N ++ C
Sbjct: 229 EMGID----DFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPR 284
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
+A ++ EM + DV +Y+++I + GG L K + F+ MK E I+PD + ++
Sbjct: 285 EAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVV 344
Query: 269 HALCKERKVKQANSVVAAM-IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGV 327
HAL K V +A +++ M + +EPNV YN+LI C + +A+ + M +G+
Sbjct: 345 HALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGL 404
Query: 328 TPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAIN 387
P + TY+ + L T +E L M +P ETY +LI + + +
Sbjct: 405 FPTIRTYHAFMRILRTG---EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLL 461
Query: 388 LLAEM 392
L EM
Sbjct: 462 LWDEM 466
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 146/359 (40%), Gaps = 48/359 (13%)
Query: 28 HEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATL 87
H+ A+++FH + I F ++L +L R + A L
Sbjct: 211 HDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHL---------------- 254
Query: 88 TILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLC-LNGEIRSAINFHDDVK 146
FC+ K Y D + ++ G C + G R A ++
Sbjct: 255 -----IFCN---------------KDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMG 294
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCED 204
G + V V+Y +I+ + G L+L ++++E D ++YN ++ ++ +
Sbjct: 295 NVGVKHDV----VSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKA 350
Query: 205 KCVSDAYDLYNEMLLKR-ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVST 263
VS+A +L M ++ I P+V TYN+LI C + +A F+ M + + P + T
Sbjct: 351 SFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRT 410
Query: 264 CDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMA 323
+ L R ++ ++A M K EP V Y LI C L M
Sbjct: 411 YHAFMRIL---RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMK 467
Query: 324 TRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHY 382
+ V PD+ +Y +MI L + ++EA + M K ++P+ E +I+ W + Y
Sbjct: 468 EKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN-ENVEDMIQSWFSGKQY 525
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 118/272 (43%), Gaps = 31/272 (11%)
Query: 191 VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL---IYGFCAGGQLRKAVG 247
V+ Y+++I + + + A+ L +EM ++ SP + TL I +CA + KA+
Sbjct: 161 VREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVHDVGKAIN 218
Query: 248 FFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC 307
F+ K ++ + L+ ALC+ + V A ++ K + +N +++G+C
Sbjct: 219 TFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCN-KDKYPFDAKSFNIVLNGWC 277
Query: 308 -LINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDA 366
+I +A + M GV DV +Y+ MIS +++ + LF M + I+PD
Sbjct: 278 NVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDR 337
Query: 367 ETYSILIEGWLNLPHYMHAINLLAEMCS------NGIAYTSKLDAICNDYN-------FD 413
+ Y+ ++ A NL+ M N + Y S + +C FD
Sbjct: 338 KVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFD 397
Query: 414 DEIEK-----------FMRYKETGGDADFLIA 434
+ +EK FMR TG + L+A
Sbjct: 398 EMLEKGLFPTIRTYHAFMRILRTGEEVFELLA 429
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 107/232 (46%), Gaps = 4/232 (1%)
Query: 164 LINELCEVGETGAALQLLRQIEEEH---TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLK 220
++ L + G+ A+ ++E+ + TD N+++ ++ ++ + A++++ + L
Sbjct: 209 VMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK-LFD 267
Query: 221 RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQA 280
I PD T+N LI+GFC + A ++MK+ PDV T + A CKE ++
Sbjct: 268 TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRV 327
Query: 281 NSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISW 340
N ++ M + PNV Y ++ Q+ +A + M G PD Y+ +I
Sbjct: 328 NEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHI 387
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
L + +A +F M + ++ D Y+ +I L+ A+ LL M
Sbjct: 388 LSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRM 439
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 141/306 (46%), Gaps = 10/306 (3%)
Query: 53 NNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILK 112
N+++ +LV+ N A + +L I PD T ILI+ FC + + A +++ +
Sbjct: 243 NSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKV 301
Query: 113 RAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVG 172
+ PD T+ ++ C G+ R ++++ G V VTY +++ L +
Sbjct: 302 TEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNV----VTYTIVMHSLGKSK 357
Query: 173 ETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYN 230
+ AL + +++E+ D + Y+++I + + DA +++ +M + + DV YN
Sbjct: 358 QVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYN 417
Query: 231 TLIYGFCAGGQLRKAVGFFNVMK---MENIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
T+I + A+ M+ E+ P+V T PL+ C ++K+K ++ M
Sbjct: 418 TMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHM 477
Query: 288 IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMM 347
+K V +V Y LI G C+ ++ +A +G+ P T +++ L NM
Sbjct: 478 VKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMA 537
Query: 348 DEAMSL 353
+ + +
Sbjct: 538 EAKLKI 543
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 137/328 (41%), Gaps = 11/328 (3%)
Query: 53 NNILGSLVRMNHYPTAVSLSQQLELK-GIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+ ++ L + Y AV ++E G+ D + L++ + +A V K+
Sbjct: 207 SKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF 266
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+PD L+ G C + A D +K F V VTY + C+
Sbjct: 267 D-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDV----VTYTSFVEAYCKE 321
Query: 172 GETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
G+ ++L ++ E + +V Y ++ S+ + K V++A +Y +M PD Y
Sbjct: 322 GDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFY 381
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
++LI+ G+ + A F M + ++ DV + +I A + + A ++ M
Sbjct: 382 SSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMED 441
Query: 290 ASVE---PNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNM 346
E PNV Y L+ C +M L H M V+ DV TY ++I LC S
Sbjct: 442 EEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGK 501
Query: 347 MDEAMSLFHYMDLKDIKPDAETYSILIE 374
++EA F K + P T +L++
Sbjct: 502 VEEACLFFEEAVRKGMVPRDSTCKMLVD 529
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 125/302 (41%), Gaps = 19/302 (6%)
Query: 84 IATLTILINCFCHLGRMNYAFSVLGKILKR-AYQPDTTALTTLMKGLCLNGEIRSA---- 138
+ T++ ++ G+ N A ++ K + DT A+ +LM L I A
Sbjct: 203 LDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF 262
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVG--ETGAALQLLRQIEEEHTDVQMYNT 196
+ D +K F + LI+ C+ + A+ L ++ E DV Y +
Sbjct: 263 LKLFDTIKPDARTFNI---------LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTS 313
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN 256
+++ C++ ++ EM +P+V TY +++ Q+ +A+G + MK +
Sbjct: 314 FVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDG 373
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA- 315
PD LIH L K + K A + M V +V +YNT+I ++ A
Sbjct: 374 CVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMAL 433
Query: 316 RFLSHTMATRG--VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
R L G +P+V TY ++ C M L H+M D+ D TY +LI
Sbjct: 434 RLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLI 493
Query: 374 EG 375
G
Sbjct: 494 RG 495
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 128/280 (45%), Gaps = 13/280 (4%)
Query: 104 FSVLGKILKRAYQPDTTALTTL------MKGLCLNGEIRSAINFHDDVKAKGFQFQVDRV 157
F ++ +++ + + + L TL M+ L +G+ A++ +++ K + + D +
Sbjct: 182 FDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEME-KSYGVKTDTI 240
Query: 158 SVTYRFLINELCEVGETGAALQL-LRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNE 216
++ L++ L + A ++ L+ + D + +N +I C+ + DA + +
Sbjct: 241 AMNS--LMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDL 298
Query: 217 MLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERK 276
M + +PDV TY + + +C G R+ M+ P+V T ++H+L K ++
Sbjct: 299 MKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQ 358
Query: 277 VKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNI 336
V +A V M + P+ Y++LI + A + M +GV DV YN
Sbjct: 359 VAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNT 418
Query: 337 MISWLCTSNMMDEAMSLFHYMDLKD---IKPDAETYSILI 373
MIS + + A+ L M+ ++ P+ ETY+ L+
Sbjct: 419 MISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 1/176 (0%)
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
+ D N+L+ + A F + + IKPD T + LIH CK RK A
Sbjct: 235 VKTDTIAMNSLMDALVKENSIEHAHEVF-LKLFDTIKPDARTFNILIHGFCKARKFDDAR 293
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
+++ M P+V Y + ++ YC + + M G P+V TY I++ L
Sbjct: 294 AMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSL 353
Query: 342 CTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
S + EA+ ++ M PDA+ YS LI + A + +M + G+
Sbjct: 354 GKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGV 409
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 98/248 (39%), Gaps = 9/248 (3%)
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVF--TYNTLIYGFCAGGQLRKAV-GFFN 250
YN ++ + + + ++L NEM S V T + ++ G+ KAV F
Sbjct: 169 YNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLE 228
Query: 251 VMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLIN 310
+ K +K D + L+ AL KE ++ A+ V + +++P+ +N LI G+C
Sbjct: 229 MEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKAR 287
Query: 311 QMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
+ AR + M TPDV TY + C + M P+ TY+
Sbjct: 288 KFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYT 347
Query: 371 ILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKLDAICNDYNFDDEIEKFMRYKET 425
I++ A+ + +M +G Y+S + + F D E F
Sbjct: 348 IVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQ 407
Query: 426 GGDADFLI 433
G D L+
Sbjct: 408 GVRRDVLV 415
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
D +N IKS CE + AY EM ++PDV TY TLI + G +
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
N+M ++ KP+++T + I L R+ AN ++ M K VEP+ YN +I G+ L
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
A + M +G P++ Y MI +LC + D A ++ K P+ +T
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 370 SILIEG 375
+L++G
Sbjct: 356 EMLLKG 361
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 3/216 (1%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
GI D + I I FC LG ++ A+ + ++ K PD TTL+ L +
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTII 198
+ + KG + + +V +FL+N + L L+ +++ E D YN +I
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRR-RAWDANDLLLLMPKLQVE-PDSITYNMVI 289
Query: 199 KSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
K + A +Y M K P++ Y T+I+ C G A +
Sbjct: 290 KGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWY 349
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEP 294
P++ T + L+ L K+ ++ QA S++ ++ V P
Sbjct: 350 PNLDTVEMLLKGLVKKGQLDQAKSIM-ELVHRRVPP 384
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 144/338 (42%), Gaps = 16/338 (4%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P I N +L + +R Y + L + GIAP+I T ++ + + + A
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 107 LGKILKRA-YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+ A P L+KGL N + A+ +D+ KGF VD V Y +L+
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFV--VD--PVVYSYLM 243
Query: 166 NELCEVGETGAALQLLRQIEEEH----TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLK- 220
+ + L+L ++++E+ D +Y ++K + +A + Y E + +
Sbjct: 244 MGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGEN 303
Query: 221 -RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKP-----DVSTCDPLIHALCKE 274
++ YN ++ G+ +A+ F+ +K E+ P ++ T + +++ C
Sbjct: 304 SKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAG 363
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY 334
K ++A V M P+ +N L++ C + +A L M + V PD +TY
Sbjct: 364 GKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTY 423
Query: 335 NIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSIL 372
+++ +DE + + M +++P+ Y+ L
Sbjct: 424 GLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRL 461
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 142/320 (44%), Gaps = 12/320 (3%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P I F ++ LV ++ A+ + + + +KG D + L+ + +
Sbjct: 199 PSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKL 258
Query: 107 LGKILKR--AYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFL 164
++ ++ + D LMKG + + A+ +++ A G +V ++ Y ++
Sbjct: 259 YQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEE--AVGENSKVRMSAMAYNYV 316
Query: 165 INELCEVGETGAALQLLRQIEEEHT-------DVQMYNTIIKSMCEDKCVSDAYDLYNEM 217
+ L E G+ AL+L +++EH ++ +N ++ C +A +++ +M
Sbjct: 317 LEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQM 376
Query: 218 LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
+ SPD ++N L+ C L +A + M+ +N+KPD T L+ KE K+
Sbjct: 377 GDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKI 436
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIM 337
+ + M+++++ PN+ +YN L D ++ A+ M ++ + D Y +
Sbjct: 437 DEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK-LKMDDEAYKFI 495
Query: 338 ISWLCTSNMMDEAMSLFHYM 357
+ L + +DE + + M
Sbjct: 496 MRALSEAGRLDEMLKIVDEM 515
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 134/296 (45%), Gaps = 11/296 (3%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+ ++G+L R + L ++ G P+ T LI+ + +N A +V ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+ +PD TL+ G + A++ + ++A G + TY +IN L +
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD----TFTYSVIINCLGKA 482
Query: 172 GETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
G AA +L ++ ++ ++ YN ++ + + +A LY +M PD TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 230 NTL--IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
+ + + G C G L +A F M+ +N PD L+ K V++A AM
Sbjct: 543 SIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Query: 288 IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
+ A + PNV N+L+ + +N++ +A L M G+ P + TY +++S CT
Sbjct: 601 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCT 655
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 2/219 (0%)
Query: 160 TYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEM 217
TY ++ L + GA +LL ++ + + YN +I S +++A +++N+M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 218 LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
PD TY TLI G L A+ + M+ + PD T +I+ L K +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIM 337
A+ + M+ PN+ YN ++D + A L M G PD TY+I+
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 338 ISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
+ L ++EA ++F M K+ PD Y +L++ W
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 1/195 (0%)
Query: 180 LLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAG 239
L RQ +H D Y T++ ++ K L +EM+ P+ TYN LI+ +
Sbjct: 354 LKRQPGFKH-DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRA 412
Query: 240 GQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIY 299
L +A+ FN M+ KPD T LI K + A + M + P+ F Y
Sbjct: 413 NYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 300 NTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDL 359
+ +I+ + A L M +G TP++ TYNIM+ + A+ L+ M
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 360 KDIKPDAETYSILIE 374
+PD TYSI++E
Sbjct: 533 AGFEPDKVTYSIVME 547
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 140/318 (44%), Gaps = 7/318 (2%)
Query: 59 LVRMNHYPTAVSLSQQLELK-GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQP 117
L +MN Y A+ L+ + G D T T ++ + +L ++++ QP
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 118 DTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAA 177
+T L+ + A+N + ++ G + DRV TY LI+ + G A
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK--PDRV--TYCTLIDIHAKAGFLDIA 453
Query: 178 LQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYG 235
+ + ++++ D Y+ II + + + A+ L+ EM+ + +P++ TYN ++
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 236 FCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPN 295
+ A+ + M+ +PD T ++ L +++A +V M + + P+
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Query: 296 VFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFH 355
+Y L+D + + KA M G+ P+V T N ++S N + EA L
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Query: 356 YMDLKDIKPDAETYSILI 373
M ++P +TY++L+
Sbjct: 634 NMLALGLRPSLQTYTLLL 651
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 6/192 (3%)
Query: 245 AVGFFNVMKME-NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLI 303
A+GFF +K + K D T ++ L + ++ N ++ M++ +PN YN LI
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 304 DGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIK 363
Y N + +A + + M G PD TY +I + +D AM ++ M +
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
Query: 364 PDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEK 418
PD TYS++I H A L EM G + Y +D N+ + ++
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL 526
Query: 419 FMRYKETGGDAD 430
+ + G + D
Sbjct: 527 YRDMQNAGFEPD 538
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 129/309 (41%), Gaps = 14/309 (4%)
Query: 97 LGRMNYAFSVLGKI--LKR--AYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
L +MN + LG LKR ++ D TT++ L + + D++ G Q
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDA 210
+VTY LI+ A+ + Q++E D Y T+I + + A
Sbjct: 398 N----TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
D+Y M +SPD FTY+ +I G L A F M + P++ T + ++
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLID--GYCLINQMTKARFLSHTMATRGVT 328
K R + A + M A EP+ Y+ +++ G+C + +A F M +
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE--MQQKNWI 571
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINL 388
PD Y +++ + +++A + M ++P+ T + L+ +L + A L
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 389 LAEMCSNGI 397
L M + G+
Sbjct: 632 LQNMLALGL 640
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 123/310 (39%), Gaps = 44/310 (14%)
Query: 19 HSHSPRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELK 78
HS+ + +EA+N F+ M P + ++ + A+ + Q+++
Sbjct: 407 HSYGRANYLNEAMNV---FNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G++PD T +++INC G + A + +++ + P+ +M ++A
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTII 198
+ + D++ GF+ VTY ++ L G L + E T++Q N I
Sbjct: 524 LKLYRDMQNAGFEPD----KVTYSIVMEVLGHCG-------YLEEAEAVFTEMQQKNWI- 571
Query: 199 KSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
PD Y L+ + G + KA ++ M ++
Sbjct: 572 -------------------------PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTK--AR 316
P+V TC+ L+ + K+ +A ++ M+ + P++ Y L+ C + +K
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS--CCTDGRSKLDMG 664
Query: 317 FLSHTMATRG 326
F MA+ G
Sbjct: 665 FCGQLMASTG 674
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 134/296 (45%), Gaps = 11/296 (3%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+ ++G+L R + L ++ G P+ T LI+ + +N A +V ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+ +PD TL+ G + A++ + ++A G + TY +IN L +
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD----TFTYSVIINCLGKA 482
Query: 172 GETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
G AA +L ++ ++ ++ YN ++ + + +A LY +M PD TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 230 NTL--IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
+ + + G C G L +A F M+ +N PD L+ K V++A AM
Sbjct: 543 SIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Query: 288 IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
+ A + PNV N+L+ + +N++ +A L M G+ P + TY +++S CT
Sbjct: 601 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCT 655
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 2/219 (0%)
Query: 160 TYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEM 217
TY ++ L + GA +LL ++ + + YN +I S +++A +++N+M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 218 LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
PD TY TLI G L A+ + M+ + PD T +I+ L K +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIM 337
A+ + M+ PN+ YN ++D + A L M G PD TY+I+
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 338 ISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
+ L ++EA ++F M K+ PD Y +L++ W
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 1/195 (0%)
Query: 180 LLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAG 239
L RQ +H D Y T++ ++ K L +EM+ P+ TYN LI+ +
Sbjct: 354 LKRQPGFKH-DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRA 412
Query: 240 GQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIY 299
L +A+ FN M+ KPD T LI K + A + M + P+ F Y
Sbjct: 413 NYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 300 NTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDL 359
+ +I+ + A L M +G TP++ TYNIM+ + A+ L+ M
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 360 KDIKPDAETYSILIE 374
+PD TYSI++E
Sbjct: 533 AGFEPDKVTYSIVME 547
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 140/318 (44%), Gaps = 7/318 (2%)
Query: 59 LVRMNHYPTAVSLSQQLELK-GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQP 117
L +MN Y A+ L+ + G D T T ++ + +L ++++ QP
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 118 DTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAA 177
+T L+ + A+N + ++ G + DRV TY LI+ + G A
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK--PDRV--TYCTLIDIHAKAGFLDIA 453
Query: 178 LQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYG 235
+ + ++++ D Y+ II + + + A+ L+ EM+ + +P++ TYN ++
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 236 FCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPN 295
+ A+ + M+ +PD T ++ L +++A +V M + + P+
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Query: 296 VFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFH 355
+Y L+D + + KA M G+ P+V T N ++S N + EA L
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Query: 356 YMDLKDIKPDAETYSILI 373
M ++P +TY++L+
Sbjct: 634 NMLALGLRPSLQTYTLLL 651
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 6/192 (3%)
Query: 245 AVGFFNVMKME-NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLI 303
A+GFF +K + K D T ++ L + ++ N ++ M++ +PN YN LI
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 304 DGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIK 363
Y N + +A + + M G PD TY +I + +D AM ++ M +
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
Query: 364 PDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEK 418
PD TYS++I H A L EM G + Y +D N+ + ++
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL 526
Query: 419 FMRYKETGGDAD 430
+ + G + D
Sbjct: 527 YRDMQNAGFEPD 538
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 129/309 (41%), Gaps = 14/309 (4%)
Query: 97 LGRMNYAFSVLGKI--LKR--AYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
L +MN + LG LKR ++ D TT++ L + + D++ G Q
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDA 210
+VTY LI+ A+ + Q++E D Y T+I + + A
Sbjct: 398 N----TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
D+Y M +SPD FTY+ +I G L A F M + P++ T + ++
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLID--GYCLINQMTKARFLSHTMATRGVT 328
K R + A + M A EP+ Y+ +++ G+C + +A F M +
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE--MQQKNWI 571
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINL 388
PD Y +++ + +++A + M ++P+ T + L+ +L + A L
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 389 LAEMCSNGI 397
L M + G+
Sbjct: 632 LQNMLALGL 640
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 123/310 (39%), Gaps = 44/310 (14%)
Query: 19 HSHSPRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELK 78
HS+ + +EA+N F+ M P + ++ + A+ + Q+++
Sbjct: 407 HSYGRANYLNEAMNV---FNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G++PD T +++INC G + A + +++ + P+ +M ++A
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTII 198
+ + D++ GF+ VTY ++ L G L + E T++Q N I
Sbjct: 524 LKLYRDMQNAGFEPD----KVTYSIVMEVLGHCG-------YLEEAEAVFTEMQQKNWI- 571
Query: 199 KSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
PD Y L+ + G + KA ++ M ++
Sbjct: 572 -------------------------PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTK--AR 316
P+V TC+ L+ + K+ +A ++ M+ + P++ Y L+ C + +K
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS--CCTDGRSKLDMG 664
Query: 317 FLSHTMATRG 326
F MA+ G
Sbjct: 665 FCGQLMASTG 674
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 134/296 (45%), Gaps = 11/296 (3%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+ ++G+L R + L ++ G P+ T LI+ + +N A +V ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+ +PD TL+ G + A++ + ++A G + TY +IN L +
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD----TFTYSVIINCLGKA 482
Query: 172 GETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
G AA +L ++ ++ ++ YN ++ + + +A LY +M PD TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 230 NTL--IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
+ + + G C G L +A F M+ +N PD L+ K V++A AM
Sbjct: 543 SIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Query: 288 IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
+ A + PNV N+L+ + +N++ +A L M G+ P + TY +++S CT
Sbjct: 601 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCT 655
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 2/219 (0%)
Query: 160 TYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEM 217
TY ++ L + GA +LL ++ + + YN +I S +++A +++N+M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 218 LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
PD TY TLI G L A+ + M+ + PD T +I+ L K +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIM 337
A+ + M+ PN+ YN ++D + A L M G PD TY+I+
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 338 ISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
+ L ++EA ++F M K+ PD Y +L++ W
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 1/195 (0%)
Query: 180 LLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAG 239
L RQ +H D Y T++ ++ K L +EM+ P+ TYN LI+ +
Sbjct: 354 LKRQPGFKH-DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRA 412
Query: 240 GQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIY 299
L +A+ FN M+ KPD T LI K + A + M + P+ F Y
Sbjct: 413 NYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 300 NTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDL 359
+ +I+ + A L M +G TP++ TYNIM+ + A+ L+ M
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 360 KDIKPDAETYSILIE 374
+PD TYSI++E
Sbjct: 533 AGFEPDKVTYSIVME 547
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 140/318 (44%), Gaps = 7/318 (2%)
Query: 59 LVRMNHYPTAVSLSQQLELK-GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQP 117
L +MN Y A+ L+ + G D T T ++ + +L ++++ QP
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 118 DTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAA 177
+T L+ + A+N + ++ G + DRV TY LI+ + G A
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK--PDRV--TYCTLIDIHAKAGFLDIA 453
Query: 178 LQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYG 235
+ + ++++ D Y+ II + + + A+ L+ EM+ + +P++ TYN ++
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 236 FCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPN 295
+ A+ + M+ +PD T ++ L +++A +V M + + P+
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Query: 296 VFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFH 355
+Y L+D + + KA M G+ P+V T N ++S N + EA L
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Query: 356 YMDLKDIKPDAETYSILI 373
M ++P +TY++L+
Sbjct: 634 NMLALGLRPSLQTYTLLL 651
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 6/192 (3%)
Query: 245 AVGFFNVMKME-NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLI 303
A+GFF +K + K D T ++ L + ++ N ++ M++ +PN YN LI
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 304 DGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIK 363
Y N + +A + + M G PD TY +I + +D AM ++ M +
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
Query: 364 PDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEK 418
PD TYS++I H A L EM G + Y +D N+ + ++
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL 526
Query: 419 FMRYKETGGDAD 430
+ + G + D
Sbjct: 527 YRDMQNAGFEPD 538
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 129/309 (41%), Gaps = 14/309 (4%)
Query: 97 LGRMNYAFSVLGKI--LKR--AYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQF 152
L +MN + LG LKR ++ D TT++ L + + D++ G Q
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 153 QVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDA 210
+VTY LI+ A+ + Q++E D Y T+I + + A
Sbjct: 398 N----TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
D+Y M +SPD FTY+ +I G L A F M + P++ T + ++
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLID--GYCLINQMTKARFLSHTMATRGVT 328
K R + A + M A EP+ Y+ +++ G+C + +A F M +
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE--MQQKNWI 571
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINL 388
PD Y +++ + +++A + M ++P+ T + L+ +L + A L
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 389 LAEMCSNGI 397
L M + G+
Sbjct: 632 LQNMLALGL 640
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 123/310 (39%), Gaps = 44/310 (14%)
Query: 19 HSHSPRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELK 78
HS+ + +EA+N F+ M P + ++ + A+ + Q+++
Sbjct: 407 HSYGRANYLNEAMNV---FNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G++PD T +++INC G + A + +++ + P+ +M ++A
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTII 198
+ + D++ GF+ VTY ++ L G L + E T++Q N I
Sbjct: 524 LKLYRDMQNAGFEPD----KVTYSIVMEVLGHCG-------YLEEAEAVFTEMQQKNWI- 571
Query: 199 KSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
PD Y L+ + G + KA ++ M ++
Sbjct: 572 -------------------------PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTK--AR 316
P+V TC+ L+ + K+ +A ++ M+ + P++ Y L+ C + +K
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS--CCTDGRSKLDMG 664
Query: 317 FLSHTMATRG 326
F MA+ G
Sbjct: 665 FCGQLMASTG 674
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 132/317 (41%), Gaps = 36/317 (11%)
Query: 110 ILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVS----VTYRFLI 165
+L + + PD+ TTLMKG NG + + + Q DR S VTY ++
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLE-----AMRRQDDRNSHPDEVTYTTVV 459
Query: 166 NELCEVGETGAALQLLRQIEEEHTDVQ--MYNTIIKSMCEDKCVSDAYDLYNEMLLKR-I 222
+ G A Q+L ++ YN ++K C+ + A DL EM I
Sbjct: 460 SAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGI 519
Query: 223 SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANS 282
PDV +YN +I G A+ FFN M+ I P + L+ A + K AN
Sbjct: 520 EPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANR 579
Query: 283 VVAAMIK-ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
V M+ V+ ++ +N L++GYC + + A+ + M G P+V TY + + +
Sbjct: 580 VFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGV 639
Query: 342 CTSNMMDEAMSLFHYMDLKD---------------------IKPDAETYSILIEGWLNLP 380
+ +A+ L+ ++K+ +KPD L + +
Sbjct: 640 SQARKPGDALLLWK--EIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAA 697
Query: 381 HYMHAINLLAEMCSNGI 397
+ A+ ++A M NGI
Sbjct: 698 FFKKALEIIACMEENGI 714
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 155/398 (38%), Gaps = 55/398 (13%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P FN +L + + L +++ PD+ T ++I +GR V
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK------------------ 148
L +I+ + + T + +L+ G++R+A ++ K
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKE 353
Query: 149 -------------------GFQFQVDRVS------VTYRFLINELCEVGETGAALQLLRQ 183
G+ + D VS V + L N + GE ++
Sbjct: 354 KEEEEAEDDEDAFEDDEDSGYSAR-DEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVF-- 410
Query: 184 IEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLL---KRISPDVFTYNTLIYGFCAGG 240
D ++Y T++K ++ V+D + M + PD TY T++ F G
Sbjct: 411 ----APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAG 466
Query: 241 QLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK-ASVEPNVFIY 299
+ +A M + + T + L+ CK+ ++ +A ++ M + A +EP+V Y
Sbjct: 467 LMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSY 526
Query: 300 NTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLF-HYMD 358
N +IDG LI+ A + M TRG+ P +Y ++ S A +F M+
Sbjct: 527 NIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMN 586
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
+K D +++L+EG+ L A +++ M NG
Sbjct: 587 DPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENG 624
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 10/204 (4%)
Query: 82 PDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINF 141
PD T T +++ F + G M+ A VL ++ + + L+KG C +I A +
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 142 -HDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH---TDVQMYNTI 197
+ + G + V V+Y +I+ + ++ AL ++ T + Y T+
Sbjct: 510 LREMTEDAGIEPDV----VSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKIS-YTTL 564
Query: 198 IKSMCEDKCVSDAYDLYNEML-LKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN 256
+K+ A +++EM+ R+ D+ +N L+ G+C G + A + MK
Sbjct: 565 MKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENG 624
Query: 257 IKPDVSTCDPLIHALCKERKVKQA 280
P+V+T L + + + RK A
Sbjct: 625 FYPNVATYGSLANGVSQARKPGDA 648
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 149/361 (41%), Gaps = 49/361 (13%)
Query: 55 ILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVL------- 107
+L SL+R + +A+ + +E G + + ++ + A S+L
Sbjct: 133 LLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEAS 192
Query: 108 --------GKILKRAYQPDTTALTTLMKGLCLNGEIRSAIN--FHDDVKAKGFQFQVDRV 157
G+++ +Y P T A+ L+ GL ++RS F K F+F
Sbjct: 193 DNHSDDDTGRVIIVSYLPGTVAVNELLVGL-RRADMRSEFKRVFEKLKGMKRFKFD---- 247
Query: 158 SVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEM 217
+ +Y I+ G+ AAL L ++++E + +Y +
Sbjct: 248 TWSYNICIHGFGCWGDLDAALSLFKEMKERSS---VYGS--------------------- 283
Query: 218 LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
PD+ TYN+LI+ C G+ + A+ ++ +K+ +PD ST LI CK ++
Sbjct: 284 ---SFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRM 340
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIM 337
A + M P+ +YN L+DG ++T+A L M GV TYNI+
Sbjct: 341 DDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNIL 400
Query: 338 ISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
I L + + +LF + K DA T+SI+ A+ L+ EM + G
Sbjct: 401 IDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGF 460
Query: 398 A 398
+
Sbjct: 461 S 461
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 129/298 (43%), Gaps = 13/298 (4%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLE-LKGIAPDIATLTILINCFCHLGRMNYAFS 105
P N +L L R + + ++L+ +K D + I I+ F G ++ A S
Sbjct: 210 PGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALS 269
Query: 106 VLGKILKRA------YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSV 159
+ ++ +R+ + PD +L+ LCL G+ + A+ D++K G + +
Sbjct: 270 LFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPD----NS 325
Query: 160 TYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEM 217
TYR LI C+ A+++ +++ D +YN ++ + + V++A L+ +M
Sbjct: 326 TYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKM 385
Query: 218 LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
+ + + +TYN LI G G+ F +K + D T + LC+E K+
Sbjct: 386 VQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKL 445
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYN 335
+ A +V M ++ ++L+ G+ + L + + P+V +N
Sbjct: 446 EGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWN 503
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/455 (20%), Positives = 164/455 (36%), Gaps = 72/455 (15%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P I +N+++ L A+ + +L++ G PD +T ILI C RM+ A
Sbjct: 286 GPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMR 345
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+ G++ + PDT L+ G ++ A + + +G V TY LI
Sbjct: 346 IYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEG----VRASCWTYNILI 401
Query: 166 NELCEVGETGAALQLLRQIEE--EHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
+ L G A L +++ + D ++ + +C + + A L EM + S
Sbjct: 402 DGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFS 461
Query: 224 PDVFTYNTLIYGFCAGGQ--------------------LRKAVG---------------- 247
D+ T ++L+ GF G+ LR G
Sbjct: 462 VDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYT 521
Query: 248 --------FFNVMKM----------ENIKP---DVSTCDPLIHALCKERKVKQANSVVAA 286
F ++M M E + P D + P + L +R + +A
Sbjct: 522 PMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLAR 581
Query: 287 MIKASVEPNVF---IYNTLIDGYCLINQMTKARFLSHTMATRGVTP-DVHTYNIMISWLC 342
+ +P+ F + NT + Y ++ A L GVT +TYN M+S
Sbjct: 582 GQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFV 641
Query: 343 TSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----I 397
A + M D TY+++I+G + A +L + G +
Sbjct: 642 KKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIV 701
Query: 398 AYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFL 432
Y + ++A+ D+ + F K G + D +
Sbjct: 702 MYNTLINALGKATRLDEATQLFDHMKSNGINPDVV 736
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 139/342 (40%), Gaps = 32/342 (9%)
Query: 59 LVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKI-------- 110
L R AV L +++E +G + D+ T++ L+ F GR ++ ++ I
Sbjct: 439 LCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPN 498
Query: 111 -----------LKRAYQPDTTALTTL-MKGLCLNGEIRSAINFHDD-VKAKGFQFQVDRV 157
LKR D KG L +I S + DD A+ D
Sbjct: 499 VLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFL--DIMSMVGSEDDGASAEEVSPMEDDP 556
Query: 158 SVTYRFLINELCEVGETGAALQLLR----QIEEEHTDVQMYNTIIKSMCEDKCVSDA--- 210
+ ++ + + L R + + + DV M NT + +S A
Sbjct: 557 WSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKL 616
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
++++N M + ++ +TYN+++ F G + A G + M D++T + +I
Sbjct: 617 FEIFNGMGVTDLTS--YTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQG 674
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
L K + A++V+ + K ++ +YNTLI+ ++ +A L M + G+ PD
Sbjct: 675 LGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPD 734
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSIL 372
V +YN MI + + EA M P+ T +IL
Sbjct: 735 VVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/377 (19%), Positives = 147/377 (38%), Gaps = 34/377 (9%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
+ + A F M+ +N ++ L R +L L+ KG D T
Sbjct: 372 ARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAIT 431
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGE------------ 134
+I+ C G++ A ++ ++ R + D +++L+ G G
Sbjct: 432 FSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIR 491
Query: 135 ----IRSAINFHDDVKAKGFQFQVDRVSVTYRF-----LINELCEVG--ETGAALQLLRQ 183
+ + + ++ V+A + Q T F ++ + VG + GA+ + +
Sbjct: 492 EGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSP 551
Query: 184 IEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS--PDVFTY---NTLIYGFCA 238
+E++ Y + + + + L+ +R+ PD F NT + + +
Sbjct: 552 MEDDPWSSSPY---MDQLAHQR--NQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLS 606
Query: 239 GGQLRKAVGFFNVMKMENIKPDVS-TCDPLIHALCKERKVKQANSVVAAMIKASVEPNVF 297
G L A F + + S T + ++ + K+ + A V+ M + ++
Sbjct: 607 KGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIA 666
Query: 298 IYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYM 357
YN +I G + + A + + +G D+ YN +I+ L + +DEA LF +M
Sbjct: 667 TYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHM 726
Query: 358 DLKDIKPDAETYSILIE 374
I PD +Y+ +IE
Sbjct: 727 KSNGINPDVVSYNTMIE 743
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 98/211 (46%), Gaps = 10/211 (4%)
Query: 68 AVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALT--TL 125
++ Q++E K + D+ + ++ + G ++ A + +I D T+ T ++
Sbjct: 578 GLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLF-EIFNGMGVTDLTSYTYNSM 636
Query: 126 MKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIE 185
M G ++A D + F+ TY +I L ++G A +L ++
Sbjct: 637 MSSFVKKGYFQTARGVLDQM----FENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 186 EE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLR 243
++ + D+ MYNT+I ++ + + +A L++ M I+PDV +YNT+I G+L+
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 244 KAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
+A + M P+ T D ++ L KE
Sbjct: 753 EAYKYLKAMLDAGCLPNHVT-DTILDYLGKE 782
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 147/352 (41%), Gaps = 8/352 (2%)
Query: 55 ILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRA 114
+L +LV + + + Q+ ++G + T +IL+ FC G+++ A L +L
Sbjct: 223 LLNALVEEKCFDSFDVIFDQISVRGFVCAV-THSILVKKFCKQGKLDEAEDYLRALLPND 281
Query: 115 YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVG-- 172
+ L L+ LC + + A D++K G +DR Y I L + G
Sbjct: 282 PAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVG-TVNMDR---AYNIWIRALIKAGFL 337
Query: 173 -ETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNT 231
LQ + +E +V YN+++ + ++ + YD+ EM+++ +SP+ T N
Sbjct: 338 NNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNA 397
Query: 232 LIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKAS 291
+ FC G + +A+ + P + + LIH LC V+QA V+ I
Sbjct: 398 ALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRG 457
Query: 292 VEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAM 351
++TL + C + AR L A R + P +IS LC +++A+
Sbjct: 458 HFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDAL 517
Query: 352 SLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKL 403
+ + + + ++ LI G + L A L+ M G T L
Sbjct: 518 MINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSL 569
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 172/414 (41%), Gaps = 27/414 (6%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
+ ++N+++ L++ N+ + ++ ++G++P+ T+ + FC G ++ A +
Sbjct: 357 VFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYR 416
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDR----VSVTYRFL 164
+ + P + L+ LC N + A +D +K +DR T+ L
Sbjct: 417 SRSEIGFAPTAMSYNYLIHTLCANESVEQA---YDVLKG-----AIDRGHFLGGKTFSTL 468
Query: 165 INELCEVGETGAALQLLRQIEEEHTDVQMYN--TIIKSMCEDKCVSDAYDLYNEMLLKRI 222
N LC G+ A +L+ E + II ++C+ V DA + NE+ K
Sbjct: 469 TNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDAL-MINELFNKSG 527
Query: 223 SPDVFT-YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCK-ERKVKQA 280
F + +LIYG + A M+ + P S +I +C+ E K
Sbjct: 528 VDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNF 587
Query: 281 NSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISW 340
+ + + E V YN I+G + AR + M G+TP V + +M+
Sbjct: 588 FTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQS 647
Query: 341 LCTSNMMDEAMSLFHYMDLKDI-KPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI-- 397
+ + +A+ FH DL++ K Y ++I G A++ L EM G+
Sbjct: 648 YLKNEKIADALHFFH--DLREQGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQP 705
Query: 398 ---AYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIVLRNPSFKATG 448
Y + +CN+ +D+ + ++++G I + VL + + K+ G
Sbjct: 706 SIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGN--VLLHNAMKSKG 757
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 111/244 (45%), Gaps = 10/244 (4%)
Query: 143 DDV---KAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE---HTDVQMYNT 196
DDV +AK ++ + T+ ++ GET ++ R++EEE +V YN
Sbjct: 227 DDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNV 286
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN 256
++++ C +S+A ++ EM ++ + D+ YNT+I G C+ ++ KA F M ++
Sbjct: 287 LMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKG 346
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTK-- 314
I+ T + L++ CK V V M + E + L++G C +
Sbjct: 347 IECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVV 406
Query: 315 --ARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSIL 372
A + + P + Y +++ LC MD A+++ M K KP ETY
Sbjct: 407 EAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAF 466
Query: 373 IEGW 376
I+G+
Sbjct: 467 IDGY 470
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 117/283 (41%), Gaps = 44/283 (15%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELK-GIAPDIATLTILINCFCHLGRMNYAFS 105
P T FN+++ S R + +++E + G +P++ + +L+ +C G M+ A
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
V ++ R D A T++ GLC N E+ A D+ KG + +TY L+
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIEC----TCLTYEHLV 358
Query: 166 NELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPD 225
N C+ G+ + L + Y EM K D
Sbjct: 359 NGYCKAGDVDSGLVV---------------------------------YREMKRKGFEAD 385
Query: 226 VFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK-----PDVSTCDPLIHALCKERKVKQA 280
T L+ G C ++ V +++K + ++ P + + L+ LC++ K+ +A
Sbjct: 386 GLTIEALVEGLCDDRDGQRVVEAADIVK-DAVREAMFYPSRNCYELLVKRLCEDGKMDRA 444
Query: 281 NSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMA 323
++ A M+ +P+ Y IDGY ++ + L+ MA
Sbjct: 445 LNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEMA 487
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 117/266 (43%), Gaps = 32/266 (12%)
Query: 161 YRFLINELCEVGETGAALQLLRQIEEEHTDVQMY--NTIIKSMCEDKCVSDAYDLYNEML 218
+ LI + E A+ ++R++ + Q+ N +I + + S+ Y +Y E+
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVF 224
Query: 219 -LKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
L +S D + +K +G IKP+ +T + ++ + +E +
Sbjct: 225 GLDDVSVD---------------EAKKMIG--------KIKPNATTFNSMMVSFYREGET 261
Query: 278 KQANSVVAAMIK-ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNI 336
+ + M + PNV+ YN L++ YC M++A + M RGV D+ YN
Sbjct: 262 EMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNT 321
Query: 337 MISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMC--- 393
MI LC++ + +A LF M LK I+ TY L+ G+ + + EM
Sbjct: 322 MIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKG 381
Query: 394 --SNGIAYTSKLDAICNDYNFDDEIE 417
++G+ + ++ +C+D + +E
Sbjct: 382 FEADGLTIEALVEGLCDDRDGQRVVE 407
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 14/179 (7%)
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
D YN +I+G C G+ +A F + + ++PDV T + +I + + +A +
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLY 68
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
A MI+ + P+ YN++I G C N++ +AR V+ T+N +I+ C +
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQAR---------KVSKSCSTFNTLINGYCKA 119
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKL 403
+ + M+LF M + I + TY+ LI G+ + + A+++ EM SNG+ Y+S +
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGV-YSSSI 177
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 15/203 (7%)
Query: 154 VDRVSVTYRFLINELCEVGETGAALQLLRQ--IEEEHTDVQMYNTIIKSMCEDKCVSDAY 211
+D + Y +I+ LC+ G+ A + I DVQ YN +I+ + A
Sbjct: 10 MDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF----SSLGRAE 65
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
LY EM+ + + PD TYN++I+G C +L +A + ST + LI+
Sbjct: 66 KLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGY 116
Query: 272 CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV 331
CK +VK ++ M + + NV Y TLI G+ + A + M + GV
Sbjct: 117 CKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSS 176
Query: 332 HTYNIMISWLCTSNMMDEAMSLF 354
T+ ++ LC+ + +A+++
Sbjct: 177 ITFRDILPQLCSRKELRKAVAML 199
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
D YN II +C+ +A +++ +L+ + PDV TYN +I F + G+ K +
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGRAEK---LY 68
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
M + PD T + +IH LCK+ K+ QA V + +NTLI+GYC
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKA 119
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
++ L M RG+ +V TY +I + A+ +F M + + T+
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 370 SILIEGWLNLPHYMHAINLL---AEMCSNGI 397
++ + A+ +L + M SN +
Sbjct: 180 RDILPQLCSRKELRKAVAMLLQKSSMVSNNV 210
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 18/209 (8%)
Query: 83 DIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFH 142
D A I+I+ C G+ + A ++ +L QPD +++ S++
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR--------FSSLGRA 64
Query: 143 DDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMC 202
+ + A+ + + ++TY +I+ LC+ + L Q + +NT+I C
Sbjct: 65 EKLYAEMIRRGLVPDTITYNSMIHGLCKQNK-------LAQARKVSKSCSTFNTLINGYC 117
Query: 203 EDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVS 262
+ V D +L+ EM + I +V TY TLI+GF G A+ F M +
Sbjct: 118 KATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSI 177
Query: 263 TCDPLIHALCKERKVKQANSVVAAMIKAS 291
T ++ LC +++++A VA +++ S
Sbjct: 178 TFRDILPQLCSRKELRKA---VAMLLQKS 203
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 2/192 (1%)
Query: 164 LINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKR 221
LI LCE G AALQLL + ++ + +V ++ +I+ C +A+ L M +R
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
I PD T+N LI G G++ + + MK++ +P+ T +++ L +++ +A
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
+++ MI + P+ Y ++ G C + + ++ M G P + ++ +
Sbjct: 328 EMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCV 387
Query: 342 CTSNMMDEAMSL 353
+ N D +L
Sbjct: 388 VSKNNDDSQANL 399
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%)
Query: 195 NTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKM 254
N +IK +CE + A L +E ++ P+V T++ LI GFC G+ +A M+
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 255 ENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTK 314
E I+PD T + LI L K+ +V++ ++ M EPN Y ++ G + +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 315 ARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
A+ + M + G+ P +Y M+ LC + + E
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVE 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%)
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
D N LI G C G L A+ + + +P+V T PLI C + K ++A ++
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
M K +EP+ +N LI G ++ + L M +G P+ TY ++ L
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
EA + M ++P +Y ++ G + +L +M ++G
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHG 372
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%)
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKAR 316
++ D + LI LC+ ++ A ++ + PNV ++ LI G+C + +A
Sbjct: 198 VEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAF 257
Query: 317 FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
L M + PD T+NI+IS L ++E + L M +K +P+ TY ++ G
Sbjct: 258 KLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL 317
Query: 377 LNLPHYMHAINLLAEMCSNGI 397
L+ + A ++++M S G+
Sbjct: 318 LDKKRNLEAKEMMSQMISWGM 338
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 2/171 (1%)
Query: 227 FTYNTL-IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVA 285
F YN + IYG AG ++ +A+ M P + + +++ L + + + +
Sbjct: 133 FFYNLMRIYGNLAG-RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFV 191
Query: 286 AMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSN 345
+ K VE + N LI G C + A L + P+V T++ +I C
Sbjct: 192 SAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKG 251
Query: 346 MMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
+EA L M+ + I+PD T++ILI G I+LL M G
Sbjct: 252 KFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKG 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 84/193 (43%), Gaps = 6/193 (3%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P FN IL LV + + G+ D L ILI C G + A +
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
L + ++ +P+ + L++G C G+ A + ++ + +++ ++T+ LI+
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE----RIEPDTITFNILIS 280
Query: 167 ELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
L + G + LL +++ + + Y ++ + + K +A ++ ++M+ + P
Sbjct: 281 GLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRP 340
Query: 225 DVFTYNTLIYGFC 237
+Y ++ G C
Sbjct: 341 SFLSYKKMVLGLC 353
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 9/330 (2%)
Query: 28 HEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAP-DIAT 86
H A+ F S FN +L L +H A S+ KG P D +
Sbjct: 200 HYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAK--KGNIPFDSCS 257
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
I+I+ + LG + VL ++++ + PD + + L++GL G I ++ D++K
Sbjct: 258 YNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIK 317
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQI--EEEHTDVQMYNTIIKSMCED 204
KG V +V Y +I + +++ R++ EE +++ Y+ ++ + +
Sbjct: 318 HKG---NVPDANV-YNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKG 373
Query: 205 KCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTC 264
+ VSDA +++ EML + + P + + C+ G A+ + + + S
Sbjct: 374 RKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAY 433
Query: 265 DPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMAT 324
L+ L + K +V M ++ +V +Y ++DG C+I + A +
Sbjct: 434 KLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMR 493
Query: 325 RGVTPDVHTYNIMISWLCTSNMMDEAMSLF 354
+G P+ Y+ + S L SN + A LF
Sbjct: 494 KGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/359 (18%), Positives = 149/359 (41%), Gaps = 12/359 (3%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
+ ++ IL +L R + + + + + +G+ PD+ LTI ++ F + + A +
Sbjct: 151 VGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFE 210
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
+ + T + L++ LC + +A + + AK D S +Y +I+
Sbjct: 211 ESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN---AKKGNIPFD--SCSYNIMISGW 265
Query: 169 CEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
++GE ++L+++ E D Y+ +I+ + ++D+ ++++ + K PD
Sbjct: 266 SKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDA 325
Query: 227 FTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAA 286
YN +I F + +++ ++ M E +P++ T L+ L K RKV A +
Sbjct: 326 NVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEE 385
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNM 346
M+ V P + + + C A + G Y +++ L
Sbjct: 386 MLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGK 445
Query: 347 MDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAE-----MCSNGIAYT 400
++++ M D E Y +++G + H +A+ ++ E C N Y+
Sbjct: 446 CGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYS 504
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
V A +L+ E + ++N L+ C + A FN K NI D + +
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK-GNIPFDSCSYNI 260
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
+I K +V++ V+ M+++ P+ Y+ LI+G ++ + + + +G
Sbjct: 261 MISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKG 320
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAI 386
PD + YN MI ++ DE+M + M ++ +P+ ETYS L+ G + A+
Sbjct: 321 NVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDAL 380
Query: 387 NLLAEMCSNGIAYTSKL 403
+ EM S G+ T+ L
Sbjct: 381 EIFEEMLSRGVLPTTGL 397
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 84/191 (43%), Gaps = 7/191 (3%)
Query: 246 VGFFN-VMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLID 304
V FF+ ++ + DV + ++ AL + + V+ M+ V P++ +D
Sbjct: 135 VTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMD 194
Query: 305 GYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKP 364
+ ++ + +A L + GV ++N ++ LC + + A S+F+ +I
Sbjct: 195 SFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK-GNIPF 253
Query: 365 DAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKF 419
D+ +Y+I+I GW L +L EM +G ++Y+ ++ + +D +E F
Sbjct: 254 DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIF 313
Query: 420 MRYKETGGDAD 430
K G D
Sbjct: 314 DNIKHKGNVPD 324
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 136/299 (45%), Gaps = 17/299 (5%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNY---AFSVLG 108
+ ++G+L R + L ++ G P+ T LI+ + GR NY A +V
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSY---GRANYLKEAMNVFN 418
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
++ + +PD TL+ G + A++ + ++ G + TY +IN L
Sbjct: 419 QMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPD----TFTYSVIINCL 474
Query: 169 CEVGETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
+ G AA +L ++ + ++ +N +I + + A LY +M PD
Sbjct: 475 GKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDK 534
Query: 227 FTYNTL--IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
TY+ + + G C G L +A G F M+ +N PD L+ K V +A
Sbjct: 535 VTYSIVMEVLGHC--GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
AM++A + PNV N+L+ + +++M++A L +M G+ P + TY +++S CT
Sbjct: 593 QAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS-CCT 650
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Query: 180 LLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAG 239
L RQ +H D Y T++ ++ K + L +EM+ P+ TYN LI+ +
Sbjct: 349 LKRQPGFKH-DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRA 407
Query: 240 GQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIY 299
L++A+ FN M+ +PD T LI K + A + M +A + P+ F Y
Sbjct: 408 NYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTY 467
Query: 300 NTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDL 359
+ +I+ + A L M +G TP++ T+NIMI+ + + A+ L+ M
Sbjct: 468 SVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQN 527
Query: 360 KDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
+PD TYSI++E + A + AEM
Sbjct: 528 AGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 560
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 2/219 (0%)
Query: 160 TYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEM 217
TY ++ L + G +LL ++ + + YN +I S + +A +++N+M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 218 LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
PD TY TLI G L A+ + M+ + PD T +I+ L K +
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIM 337
A+ + M+ PN+ +N +I + A L M G PD TY+I+
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 338 ISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
+ L ++EA +F M K+ PD Y +L++ W
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLW 579
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 142/318 (44%), Gaps = 7/318 (2%)
Query: 59 LVRMNHYPTAVSLSQQLELK-GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQP 117
L +M++Y A+ L+ + G D T T ++ + +L ++++ +P
Sbjct: 333 LKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKP 392
Query: 118 DTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAA 177
+T L+ ++ A+N + ++ G + DRV TY LI+ + G A
Sbjct: 393 NTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCE--PDRV--TYCTLIDIHAKAGFLDIA 448
Query: 178 LQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYG 235
+ + ++++E D Y+ II + + + A+ L+ EM+ + +P++ T+N +I
Sbjct: 449 MDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIAL 508
Query: 236 FCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPN 295
A+ + M+ +PD T ++ L +++A V A M + + P+
Sbjct: 509 HAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPD 568
Query: 296 VFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFH 355
+Y L+D + + KA M G+ P+V T N ++S + M EA +L
Sbjct: 569 EPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQ 628
Query: 356 YMDLKDIKPDAETYSILI 373
M + P +TY++L+
Sbjct: 629 SMLALGLHPSLQTYTLLL 646
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 6/244 (2%)
Query: 158 SVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYN 215
+VTY LI+ A+ + Q++E D Y T+I + + A D+Y
Sbjct: 394 TVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQ 453
Query: 216 EMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKER 275
M +SPD FTY+ +I G L A F M + P++ T + +I K R
Sbjct: 454 RMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKAR 513
Query: 276 KVKQANSVVAAMIKASVEPNVFIYNTLID--GYCLINQMTKARFLSHTMATRGVTPDVHT 333
+ A + M A +P+ Y+ +++ G+C + + F M + PD
Sbjct: 514 NYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAE--MQRKNWVPDEPV 571
Query: 334 YNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMC 393
Y +++ + +D+A + M ++P+ T + L+ +L + A NLL M
Sbjct: 572 YGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSML 631
Query: 394 SNGI 397
+ G+
Sbjct: 632 ALGL 635
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
Query: 245 AVGFFNVMKME-NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLI 303
A+GFF +K + K D T ++ L + ++ + N ++ M++ +PN YN LI
Sbjct: 342 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLI 401
Query: 304 DGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIK 363
Y N + +A + + M G PD TY +I + +D AM ++ M +
Sbjct: 402 HSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLS 461
Query: 364 PDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
PD TYS++I H A L EM G
Sbjct: 462 PDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG 494
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%)
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
D TY T++ Q + + M + KP+ T + LIH+ + +K+A +V
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
M +A EP+ Y TLID + + A + M G++PD TY+++I+ L +
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
+ A LF M + P+ T++I+I +Y A+ L +M + G
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAG 529
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 118/288 (40%), Gaps = 46/288 (15%)
Query: 19 HSHSPRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELK 78
HS+ + EA+N F+ M P + ++ + A+ + Q+++
Sbjct: 402 HSYGRANYLKEAMNV---FNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEA 458
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIR-- 136
G++PD T +++INC G + A + +++ + P+ L T + L+ + R
Sbjct: 459 GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPN---LVTFNIMIALHAKARNY 515
Query: 137 -SAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYN 195
+A+ + D++ GFQ VTY ++ L G
Sbjct: 516 ETALKLYRDMQNAGFQPD----KVTYSIVMEVLGHCG----------------------- 548
Query: 196 TIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME 255
+ +A ++ EM K PD Y L+ + G + KA ++ M
Sbjct: 549 ----------FLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQA 598
Query: 256 NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLI 303
++P+V TC+ L+ + ++ +A +++ +M+ + P++ Y L+
Sbjct: 599 GLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 170/394 (43%), Gaps = 64/394 (16%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
+ +N++L + + + AV L +++E +GI+P + T ILI + LG+ + A ++
Sbjct: 247 VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQ 306
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
K+ D T ++ GL NG A+ D+ K F V +VT ++
Sbjct: 307 KMETFGITADVFTWTAMISGLIHNGMRYQAL----DMFRKMFLAGVVPNAVTIMSAVSAC 362
Query: 169 CEVGETGAALQLLRQIEEEHT---------DVQMYNTIIKSMCEDKCVSDAYDLYNEMLL 219
+ L+++ Q E H+ DV + N+++ + + DA +++ +
Sbjct: 363 -------SCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN 415
Query: 220 KRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQ 279
K DV+T+N++I G+C G KA F M+ N++P++ T + +I K +
Sbjct: 416 K----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGE 471
Query: 280 ANSVVAAMIK-ASVEPNVFIYNTLIDGYC----------LINQMTKARFLSHTMATRGVT 328
A + M K V+ N +N +I GY L +M +RF+ +++ +
Sbjct: 472 AMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
Query: 329 P------------DVH-------------TYNIMISWLCTSNMMDEAMSLFHYMDLKDIK 363
P ++H N + S ++ + ++F M+ KDI
Sbjct: 532 PACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDII 591
Query: 364 PDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
T++ LI G++ Y A+ L +M + GI
Sbjct: 592 ----TWNSLIGGYVLHGSYGPALALFNQMKTQGI 621
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 143/349 (40%), Gaps = 45/349 (12%)
Query: 83 DIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFH 142
++ T + +I + R + ++K PD +++G G++ + H
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 143 DDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMC 202
V G + RVS + ++ + GE A + R++ E DV +N+++ + C
Sbjct: 205 SVVIKLGMSSCL-RVSNS---ILAVYAKCGELDFATKFFRRMRER--DVIAWNSVLLAYC 258
Query: 203 EDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVS 262
++ +A +L EM + ISP + T+N LI G+ G+ A+ M+ I DV
Sbjct: 259 QNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVF 318
Query: 263 TCDPLIHALCKERKVKQANSVVAAMIKASVEPN--------------------------- 295
T +I L QA + M A V PN
Sbjct: 319 TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIA 378
Query: 296 --------VFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMM 347
V + N+L+D Y ++ AR + ++ + DV+T+N MI+ C +
Sbjct: 379 VKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYC 434
Query: 348 DEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
+A LF M +++P+ T++ +I G++ A++L M +G
Sbjct: 435 GKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 152/371 (40%), Gaps = 34/371 (9%)
Query: 33 AVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILIN 92
AV M +P + +N ++G ++ A+ L Q++E GI D+ T T +I+
Sbjct: 266 AVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMIS 325
Query: 93 CFCHLGRMNYAFSVLGKILKRAYQPDT-TALTTLMKGLCL-----NGEIRS---AINFHD 143
H G A + K+ P+ T ++ + CL E+ S + F D
Sbjct: 326 GLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFID 385
Query: 144 DV------------------KAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIE 185
DV K F ++ T+ +I C+ G G A +L +++
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 186 EEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLK-RISPDVFTYNTLIYGFCAGGQL 242
+ + ++ +NT+I ++ +A DL+ M ++ + T+N +I G+ G+
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKK 505
Query: 243 RKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTL 302
+A+ F M+ P+ T L+ A K + +++ +++ + N L
Sbjct: 506 DEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNAL 565
Query: 303 IDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDI 362
D Y + +R + M T+ D+ T+N +I A++LF+ M + I
Sbjct: 566 TDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQGI 621
Query: 363 KPDAETYSILI 373
P+ T S +I
Sbjct: 622 TPNRGTLSSII 632
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 136/313 (43%), Gaps = 12/313 (3%)
Query: 53 NNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATL-TILINCFCHLGRMNYAFSVLGKIL 111
N+IL LV+ + + L Q++ G+ PD+ T T+L C A ++G++
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
Q D+ T++ NG A NF +K +G + Y L+N
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNI----YHYSSLLNSYSWK 285
Query: 172 GETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
G+ A +L+ +++ + M T++K + + +L +E+ + + Y
Sbjct: 286 GDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPY 345
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
L+ G G+L +A F+ MK + ++ D +I ALC+ ++ K+A +
Sbjct: 346 CMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSET 405
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
+ ++ + NT++ YC +M + M + V+PD +T++I+I + + E
Sbjct: 406 TYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYF-----IKE 460
Query: 350 AMSLFHYMDLKDI 362
+ L Y D+
Sbjct: 461 KLHLLAYQTTLDM 473
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 127/313 (40%), Gaps = 46/313 (14%)
Query: 124 TLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGET-GAALQLLR 182
+++ L NG++ S I D +K G + V VTY L+ +V A++L+
Sbjct: 171 SILSCLVKNGKLDSCIKLFDQMKRDGLKPDV----VTYNTLLAGCIKVKNGYPKAIELIG 226
Query: 183 QIEEEHTDVQM----YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA 238
++ H +QM Y T++ + +A + +M ++ SP+++ Y++L+ +
Sbjct: 227 ELP--HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSW 284
Query: 239 GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFI 298
G +KA MK + P+ L+ K ++ +++ + A N
Sbjct: 285 KGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMP 344
Query: 299 YNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEA-------- 350
Y L+DG ++ +AR + M +GV D + +IMIS LC S EA
Sbjct: 345 YCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSE 404
Query: 351 ---------------------------MSLFHYMDLKDIKPDAETYSILIEGWLNLPHYM 383
M + MD + + PD T+ ILI+ ++ ++
Sbjct: 405 TTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHL 464
Query: 384 HAINLLAEMCSNG 396
A +M S G
Sbjct: 465 LAYQTTLDMHSKG 477
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 6/240 (2%)
Query: 46 APPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
+P I ++++L S Y A L +++ G+ P+ +T L+ + G + +
Sbjct: 269 SPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRE 328
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+L ++ Y + LM GL G++ A + DD+K KG V +I
Sbjct: 329 LLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKG----VRSDGYANSIMI 384
Query: 166 NELCEVGETGAALQLLRQIEE--EHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
+ LC A +L R E E D+ M NT++ + C + + +M + +S
Sbjct: 385 SALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVS 444
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
PD T++ LI F A M + + + C LI+ L K R +A SV
Sbjct: 445 PDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSV 504
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
D+ YNT+IK++CE + +A L +E+ K + PD+ T+NTL+ GQ +
Sbjct: 179 DIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIW 238
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
M +N+ D+ T + + L E K K+ ++ + + ++P+VF +N +I G
Sbjct: 239 AKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINE 298
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFH 355
+M +A + G PD T+ +++ +C + + A+ LF
Sbjct: 299 GKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFK 344
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 5/187 (2%)
Query: 212 DLYNEMLLK-RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
+L+NE+ K I PD+ +YNTLI C L +AV + ++ + +KPD+ T + L+ +
Sbjct: 165 ELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS 224
Query: 271 LCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLS--HTMATRGVT 328
+ + + + A M++ +V ++ YN + G L N+ ++ + G+
Sbjct: 225 SYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLG--LANEAKSKELVNLFGELKASGLK 282
Query: 329 PDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINL 388
PDV ++N MI MDEA + + + +PD T+++L+ + AI L
Sbjct: 283 PDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIEL 342
Query: 389 LAEMCSN 395
E S
Sbjct: 343 FKETFSK 349
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 148/351 (42%), Gaps = 39/351 (11%)
Query: 95 CHLGRMNYAFSVLGK--ILKRAYQPDTTALTTLMKGLCLNGE---IRSAINFHDDVKAKG 149
C + R + A +V+ + + A P +LT+L+ NGE R F +++
Sbjct: 15 CPIRRFSSAATVVSEPTAVTAAISPPQKSLTSLV-----NGERNPKRIVEKFKKACESER 69
Query: 150 FQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVS- 208
F+ + T R L+ A + L +EE + + Y + K + +S
Sbjct: 70 FRTNIAVYDRTVRRLV-----------AAKRLHYVEEILEEQKKYRDMSKEGFAARIISL 118
Query: 209 --------DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKME-NIKP 259
+A ++ EM + V ++N L+ + + FN + + +IKP
Sbjct: 119 YGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKP 178
Query: 260 DVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLS 319
D+ + + LI ALC++ + +A +++ + ++P++ +NTL+ L Q +
Sbjct: 179 DIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIW 238
Query: 320 HTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNL 379
M + V D+ TYN + L E ++LF + +KPD +++ +I G +N
Sbjct: 239 AKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINE 298
Query: 380 PHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDDEIEKFMRYKET 425
A E+ +G + L A+C +F+ IE F KET
Sbjct: 299 GKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELF---KET 346
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 91/239 (38%), Gaps = 39/239 (16%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATL-TILINCFCHLGRMNYAFS 105
P I +N ++ +L + P AV+L ++E KG+ PDI T T+L++ + G+
Sbjct: 178 PDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLK-GQFELGEE 236
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+ K++++ D + GL + + +N ++KA G +
Sbjct: 237 IWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLK-------------- 282
Query: 166 NELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPD 225
DV +N +I+ + + +A Y E++ PD
Sbjct: 283 -----------------------PDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPD 319
Query: 226 VFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
T+ L+ C G A+ F + +T L+ L K K ++A +V
Sbjct: 320 KATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 128/331 (38%), Gaps = 20/331 (6%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQL--ELKG-IAPDIATLT 88
NA + F M S P P + IL + V + + A + + L E K + PD
Sbjct: 192 NAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH 251
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
++I + G A V ++ + T +LM + +D ++
Sbjct: 252 MMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRS 308
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDV------QMYNTIIKSMC 202
Q V V+Y LI AL + EE D + YN ++ +
Sbjct: 309 DIQPDV----VSYALLIKAYGRARREEEALSVF----EEMLDAGVRPTHKAYNILLDAFA 360
Query: 203 EDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVS 262
V A ++ M RI PD+++Y T++ + + A FF +K++ +P++
Sbjct: 361 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 420
Query: 263 TCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTM 322
T LI K V++ V M + ++ N I T++D A M
Sbjct: 421 TYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM 480
Query: 323 ATRGVTPDVHTYNIMISWLCTSNMMDEAMSL 353
+ GV PD N+++S T + ++EA L
Sbjct: 481 ESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 152/385 (39%), Gaps = 47/385 (12%)
Query: 55 ILGSLVRMNHYPTAVSLSQQLELKGIA-----PDIATLTILINCFCHLGRMNYAFSVLGK 109
+LG+LVR +S+ LE +I L +LI + LG N A VL
Sbjct: 106 VLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFL-MLITAYGKLGNFNGAERVLSV 164
Query: 110 ILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELC 169
+ K P+ + T LM+ G+ +A +++ G + ++TY+ ++
Sbjct: 165 LSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG----PEPSAITYQIILKTFV 220
Query: 170 EVGETGAALQLLRQIEEEHT-----DVQMYNTII-------------------------- 198
E + A ++ + +E D +MY+ +I
Sbjct: 221 EGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQ 280
Query: 199 ------KSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
M + + +Y++M I PDV +Y LI + + +A+ F M
Sbjct: 281 STVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 340
Query: 253 KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQM 312
++P + L+ A V+QA +V +M + + P+++ Y T++ Y + M
Sbjct: 341 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 400
Query: 313 TKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSIL 372
A + G P++ TY +I +N +++ M ++ M L IK + + +
Sbjct: 401 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTI 460
Query: 373 IEGWLNLPHYMHAINLLAEMCSNGI 397
++ ++ A+ EM S G+
Sbjct: 461 MDASGRCKNFGSALGWYKEMESCGV 485
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 128/331 (38%), Gaps = 20/331 (6%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQL--ELKG-IAPDIATLT 88
NA + F M S P P + IL + V + + A + + L E K + PD
Sbjct: 199 NAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH 258
Query: 89 ILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAK 148
++I + G A V ++ + T +LM + +D ++
Sbjct: 259 MMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRS 315
Query: 149 GFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDV------QMYNTIIKSMC 202
Q V V+Y LI AL + EE D + YN ++ +
Sbjct: 316 DIQPDV----VSYALLIKAYGRARREEEALSVF----EEMLDAGVRPTHKAYNILLDAFA 367
Query: 203 EDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVS 262
V A ++ M RI PD+++Y T++ + + A FF +K++ +P++
Sbjct: 368 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 427
Query: 263 TCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTM 322
T LI K V++ V M + ++ N I T++D A M
Sbjct: 428 TYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM 487
Query: 323 ATRGVTPDVHTYNIMISWLCTSNMMDEAMSL 353
+ GV PD N+++S T + ++EA L
Sbjct: 488 ESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 152/385 (39%), Gaps = 47/385 (12%)
Query: 55 ILGSLVRMNHYPTAVSLSQQLELKGIA-----PDIATLTILINCFCHLGRMNYAFSVLGK 109
+LG+LVR +S+ LE +I L +LI + LG N A VL
Sbjct: 113 VLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFL-MLITAYGKLGNFNGAERVLSV 171
Query: 110 ILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELC 169
+ K P+ + T LM+ G+ +A +++ G + ++TY+ ++
Sbjct: 172 LSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG----PEPSAITYQIILKTFV 227
Query: 170 EVGETGAALQLLRQIEEEHT-----DVQMYNTII-------------------------- 198
E + A ++ + +E D +MY+ +I
Sbjct: 228 EGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQ 287
Query: 199 ------KSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
M + + +Y++M I PDV +Y LI + + +A+ F M
Sbjct: 288 STVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 347
Query: 253 KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQM 312
++P + L+ A V+QA +V +M + + P+++ Y T++ Y + M
Sbjct: 348 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 407
Query: 313 TKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSIL 372
A + G P++ TY +I +N +++ M ++ M L IK + + +
Sbjct: 408 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTI 467
Query: 373 IEGWLNLPHYMHAINLLAEMCSNGI 397
++ ++ A+ EM S G+
Sbjct: 468 MDASGRCKNFGSALGWYKEMESCGV 492
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%)
Query: 217 MLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERK 276
ML I P TYN++I GFC ++ A + M + PDV T LI+ CK ++
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 277 VKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNI 336
V + M + + N Y TLI G+C + + A+ L + M + GV PD T++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 337 MISWLCTSNMMDEAMSLFH 355
M++ LC+ + +A ++
Sbjct: 121 MLAGLCSKKELRKAFAILE 139
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 66/112 (58%)
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNM 346
M++ S+ P YN++IDG+C +++ A+ + +MA++G +PDV T++ +I+ C +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 347 MDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA 398
+D M +F M + I + TY+ LI G+ + A +LL EM S G+A
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 112
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%)
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
YN++I C+ V DA + + M K SPDV T++TLI G+C ++ + F M
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
I + T LIH C+ + A ++ MI V P+ ++ ++ G C ++
Sbjct: 73 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 132
Query: 314 KA 315
KA
Sbjct: 133 KA 134
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
Query: 157 VSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLY 214
++TY +I+ C+ A ++L + + DV ++T+I C+ K V + +++
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
EM + I + TY TLI+GFC G L A N M + PD T ++ LC +
Sbjct: 69 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 128
Query: 275 RKVKQANSVVAAMIKA 290
+++++A +++ + K+
Sbjct: 129 KELRKAFAILEDLQKS 144
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%)
Query: 256 NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA 315
+I P T + +I CK+ +V A ++ +M P+V ++TLI+GYC ++
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 316 RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
+ M RG+ + TY +I C +D A L + M + PD T+ ++ G
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 376 WLNLPHYMHAINLLAEM 392
+ A +L ++
Sbjct: 125 LCSKKELRKAFAILEDL 141
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
Query: 40 MLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGR 99
ML P +N+++ + + A + + KG +PD+ T + LIN +C R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 100 MNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSV 159
++ + ++ +R +T TTL+ G C G++ +A + +++ + G V +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG----VAPDYI 116
Query: 160 TYRFLINELCEVGETGAALQLLRQIE--EEH 188
T+ ++ LC E A +L ++ E+H
Sbjct: 117 TFHCMLAGLCSKKELRKAFAILEDLQKSEDH 147
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 53/115 (46%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+A +M S +P + F+ ++ + + + ++ +GI + T T LI
Sbjct: 28 DAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 87
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
+ FC +G ++ A +L +++ PD ++ GLC E+R A +D++
Sbjct: 88 HGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 142
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 123/319 (38%), Gaps = 56/319 (17%)
Query: 1 MSLFRSRFLSIPSLFMRYHSHSPRPFSHEAV--------------NAVSSFHNMLSMRPA 46
+ L R R+ ++ + H S P + E +S+F+ ML
Sbjct: 92 LKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFT 151
Query: 47 PPITQFNNILGSLVRMNHY-PTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFS 105
P N IL LV Y A L + L G+ P+ + +L+ FC ++ A+
Sbjct: 152 PQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQ 211
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
+ GK+L+R PD + L++G C G++ A+ DD+ KGF V R LI
Sbjct: 212 LFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGF--------VPDRTLI 263
Query: 166 NELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPD 225
LC+ G M++ K + EM+ K SP
Sbjct: 264 GGLCDQG--------------------MFDEGKKYL-------------EEMISKGFSPH 290
Query: 226 VFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVA 285
N L+ GFC+ G++ +A V+ T + +I +C E + ++ +
Sbjct: 291 FSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLE 350
Query: 286 AMIKASVEPNVFIYNTLID 304
+K + + I + I+
Sbjct: 351 DAVKEEITGDTRIVDVGIE 369
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
YN ++++ C + +S AY L+ +ML + + PDV +Y LI GFC GQ+ A+ + M
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDML 252
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
+ PD + LI LC + + + MI P+ + N L+ G+C ++
Sbjct: 253 NKGFVPDRT----LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVE 308
Query: 314 KARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLF 354
+A + + G T T+ ++I +C + E + LF
Sbjct: 309 EACDVVEVVMKNGETLHSDTWEMVIPLICNED-ESEKIKLF 348
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 100/253 (39%), Gaps = 14/253 (5%)
Query: 192 QMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCA-GGQLRKAVGFFN 250
+++ +IK E K + +ML +P N ++ + G L+KA F
Sbjct: 120 EIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFK 179
Query: 251 VMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLIN 310
++ + P+ + + L+ A C + A + M++ V P+V Y LI G+C
Sbjct: 180 SSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG 239
Query: 311 QMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
Q+ A L M +G PD +I LC M DE M K P +
Sbjct: 240 QVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSN 295
Query: 371 ILIEGWLNLPHYMHAINLLAEMCSNGIAYTSK-----LDAICNDYNFDDEIEKFMRYKET 425
L++G+ + A +++ + NG S + ICN +DE EK + E
Sbjct: 296 CLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN----EDESEKIKLFLED 351
Query: 426 GGDADFLIASHIV 438
+ + IV
Sbjct: 352 AVKEEITGDTRIV 364
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 138/326 (42%), Gaps = 10/326 (3%)
Query: 54 NILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKR 113
I+ + AV + +L G+ + ++ +L++ C R+ A VL + LK
Sbjct: 160 KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKS 218
Query: 114 AYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGE 173
P+ + G C + A+ ++K GF+ V ++Y +I C+ E
Sbjct: 219 HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCV----ISYTTIIRCYCQQFE 274
Query: 174 TGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNT 231
++L ++E + + Y TI+ S+ K +A + M PD YN
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNC 334
Query: 232 LIYGFCAGGQLRKAVGFFNVMKME-NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKA 290
LI+ G+L +A F V E + + ST + +I C + +A ++ M +
Sbjct: 335 LIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESS 394
Query: 291 SV-EPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG-VTPDVHTYNIMISWLCTSNMMD 348
++ P+V Y L+ + + L M T+ ++ D TY +I LC +NM +
Sbjct: 395 NLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCE 454
Query: 349 EAMSLFHYMDLKDIKPDAETYSILIE 374
A LF M +DI P T +L+E
Sbjct: 455 WAYCLFEEMISQDITPRHRTCLLLLE 480
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 208 SDAYDLYNEML------------LKRISPD-VFTYNT---LIYGFCAGGQLRKAVGFFNV 251
SDAYD+ ++L ++R+ D + T NT ++ F G+ +AVG F+
Sbjct: 121 SDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDR 180
Query: 252 MKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQ 311
+ ++ + + + L+ LCKE++V+QA VV +K+ + PN +N I G+C N+
Sbjct: 181 LGEFGLEKNTESMNLLLDTLCKEKRVEQAR-VVLLQLKSHITPNAHTFNIFIHGWCKANR 239
Query: 312 MTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSI 371
+ +A + M G P V +Y +I C + + M+ P++ TY+
Sbjct: 240 VEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTT 299
Query: 372 LIEGWLNLPHYMHAINLLAEMCSNG 396
++ + A+ + M +G
Sbjct: 300 IMSSLNAQKEFEEALRVATRMKRSG 324
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 127/289 (43%), Gaps = 10/289 (3%)
Query: 75 LELKG-IAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNG 133
L+LK I P+ T I I+ +C R+ A + ++ ++P + TT+++ C
Sbjct: 214 LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQF 273
Query: 134 EIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDV 191
E +++A G S+TY +++ L E AL++ +++ D
Sbjct: 274 EFIKVYEMLSEMEANGSPPN----SITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDS 329
Query: 192 QMYNTIIKSMCEDKCVSDAYDLYN-EMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFN 250
YN +I ++ + +A ++ EM +S + TYN++I +C + KA+
Sbjct: 330 LFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLK 389
Query: 251 VMKMENI-KPDVSTCDPLIHALCKERKVKQANSVVAAMI-KASVEPNVFIYNTLIDGYCL 308
M+ N+ PDV T PL+ + K V + ++ M+ K + + Y LI C
Sbjct: 390 EMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449
Query: 309 INQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYM 357
N A L M ++ +TP T +++ + NM + A + H M
Sbjct: 450 ANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 96/209 (45%), Gaps = 2/209 (0%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
+ + N ++ ++C++K V A + + L I+P+ T+N I+G+C ++ +A+
Sbjct: 189 NTESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
MK +P V + +I C++ + + +++ M PN Y T++
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQ 307
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHY-MDLKDIKPDAET 368
+ +A ++ M G PD YN +I L + ++EA +F M + + T
Sbjct: 308 KEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTST 367
Query: 369 YSILIEGWLNLPHYMHAINLLAEMCSNGI 397
Y+ +I + + AI LL EM S+ +
Sbjct: 368 YNSMIAMYCHHDEEDKAIELLKEMESSNL 396
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 138/326 (42%), Gaps = 10/326 (3%)
Query: 54 NILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKR 113
I+ + AV + +L G+ + ++ +L++ C R+ A VL + LK
Sbjct: 160 KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKS 218
Query: 114 AYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGE 173
P+ + G C + A+ ++K GF+ V ++Y +I C+ E
Sbjct: 219 HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCV----ISYTTIIRCYCQQFE 274
Query: 174 TGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNT 231
++L ++E + + Y TI+ S+ K +A + M PD YN
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNC 334
Query: 232 LIYGFCAGGQLRKAVGFFNVMKME-NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKA 290
LI+ G+L +A F V E + + ST + +I C + +A ++ M +
Sbjct: 335 LIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESS 394
Query: 291 SV-EPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG-VTPDVHTYNIMISWLCTSNMMD 348
++ P+V Y L+ + + L M T+ ++ D TY +I LC +NM +
Sbjct: 395 NLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCE 454
Query: 349 EAMSLFHYMDLKDIKPDAETYSILIE 374
A LF M +DI P T +L+E
Sbjct: 455 WAYCLFEEMISQDITPRHRTCLLLLE 480
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 208 SDAYDLYNEML------------LKRISPD-VFTYNT---LIYGFCAGGQLRKAVGFFNV 251
SDAYD+ ++L ++R+ D + T NT ++ F G+ +AVG F+
Sbjct: 121 SDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDR 180
Query: 252 MKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQ 311
+ ++ + + + L+ LCKE++V+QA VV +K+ + PN +N I G+C N+
Sbjct: 181 LGEFGLEKNTESMNLLLDTLCKEKRVEQAR-VVLLQLKSHITPNAHTFNIFIHGWCKANR 239
Query: 312 MTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSI 371
+ +A + M G P V +Y +I C + + M+ P++ TY+
Sbjct: 240 VEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTT 299
Query: 372 LIEGWLNLPHYMHAINLLAEMCSNG 396
++ + A+ + M +G
Sbjct: 300 IMSSLNAQKEFEEALRVATRMKRSG 324
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 127/289 (43%), Gaps = 10/289 (3%)
Query: 75 LELKG-IAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNG 133
L+LK I P+ T I I+ +C R+ A + ++ ++P + TT+++ C
Sbjct: 214 LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQF 273
Query: 134 EIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDV 191
E +++A G S+TY +++ L E AL++ +++ D
Sbjct: 274 EFIKVYEMLSEMEANGSPPN----SITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDS 329
Query: 192 QMYNTIIKSMCEDKCVSDAYDLYN-EMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFN 250
YN +I ++ + +A ++ EM +S + TYN++I +C + KA+
Sbjct: 330 LFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLK 389
Query: 251 VMKMENI-KPDVSTCDPLIHALCKERKVKQANSVVAAMI-KASVEPNVFIYNTLIDGYCL 308
M+ N+ PDV T PL+ + K V + ++ M+ K + + Y LI C
Sbjct: 390 EMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449
Query: 309 INQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYM 357
N A L M ++ +TP T +++ + NM + A + H M
Sbjct: 450 ANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 96/209 (45%), Gaps = 2/209 (0%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
+ + N ++ ++C++K V A + + L I+P+ T+N I+G+C ++ +A+
Sbjct: 189 NTESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
MK +P V + +I C++ + + +++ M PN Y T++
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQ 307
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHY-MDLKDIKPDAET 368
+ +A ++ M G PD YN +I L + ++EA +F M + + T
Sbjct: 308 KEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTST 367
Query: 369 YSILIEGWLNLPHYMHAINLLAEMCSNGI 397
Y+ +I + + AI LL EM S+ +
Sbjct: 368 YNSMIAMYCHHDEEDKAIELLKEMESSNL 396
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 6/208 (2%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
+V+ N ++++C++K V +A ++ + L + I PD TY T+I GFC G L +A +
Sbjct: 180 NVETMNRGVETLCKEKLVEEAKFVFIK-LKEFIKPDEITYRTMIQGFCDVGDLIEAAKLW 238
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI-KASVEPNVFIYNTLIDGYCL 308
N+M E D+ ++ L K+ + +A+ V M+ K + + Y +ID C
Sbjct: 239 NLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCK 298
Query: 309 INQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAET 368
++ AR + M RGV D T+ +I L + EA L ++ PD
Sbjct: 299 NGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVE----NPDISI 354
Query: 369 YSILIEGWLNLPHYMHAINLLAEMCSNG 396
Y LI+G + + A + +M G
Sbjct: 355 YHGLIKGLVKIKRASEATEVFRKMIQRG 382
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 7/185 (3%)
Query: 158 SVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYN 215
+TYR +I C+VG+ A +L + +E D++ I++++ + +A ++
Sbjct: 215 EITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFY 274
Query: 216 EMLLKRISP-DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
M+ KR D Y +I C G++ A F+ M+ + D T LI+ L +
Sbjct: 275 VMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVK 334
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY 334
R+V +A +V + P++ IY+ LI G I + ++A + M RG P +HTY
Sbjct: 335 RRVVEAYGLVEGV----ENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTY 390
Query: 335 NIMIS 339
+++
Sbjct: 391 LMLLQ 395
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 5/196 (2%)
Query: 111 LKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCE 170
LK +PD T+++G C G++ A + + +GF ++ L+ + +
Sbjct: 207 LKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKK-NQ 265
Query: 171 VGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYN 230
E ++ D Y +I +C++ + A +++EM + + D T+
Sbjct: 266 FDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWA 325
Query: 231 TLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKA 290
+LIYG ++ +A G V +EN PD+S LI L K ++ +A V MI+
Sbjct: 326 SLIYGLLVKRRVVEAYGL--VEGVEN--PDISIYHGLIKGLVKIKRASEATEVFRKMIQR 381
Query: 291 SVEPNVFIYNTLIDGY 306
EP + Y L+ G+
Sbjct: 382 GCEPIMHTYLMLLQGH 397
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 128/328 (39%), Gaps = 46/328 (14%)
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+R Y PD + L+ + G+ R A+ ++K G + Y LI
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDAS----VYNALITAHLHT 181
Query: 172 GETGAALQLLRQ-------IEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
+ AL+ +R IE +V YN ++++ + V L+ ++ + +SP
Sbjct: 182 RDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSP 241
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
DV+T+N ++ + G +++ M+ KPD+ T + LI + K+++ ++
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY---------- 334
+++++ +P + +N++I Y + KA ++ M P TY
Sbjct: 302 KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Query: 335 -------------------------NIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
N M+ C + + EA LFH + PDA TY
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGI 397
L + + L+ +M +GI
Sbjct: 422 KFLYKAYTKADMKEQVQILMKKMEKDGI 449
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/327 (17%), Positives = 112/327 (34%), Gaps = 48/327 (14%)
Query: 82 PDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINF 141
PD + LI+ G+ A + ++ +PD + L+ + A+
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE- 189
Query: 142 HDDVKAKGFQFQVDRVS------VTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQM 193
K +G+ ++ + VTY L+ + G+ L + ++ DV
Sbjct: 190 ----KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 245
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
+N ++ + ++ + + + M PD+ T+N LI + + K F +
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIY-------------- 299
KP + T + +I K R + +A V M + P+ Y
Sbjct: 306 RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVS 365
Query: 300 ---------------------NTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMI 338
N +++ YC +A L H + V PD TY +
Sbjct: 366 RAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLY 425
Query: 339 SWLCTSNMMDEAMSLFHYMDLKDIKPD 365
++M ++ L M+ I P+
Sbjct: 426 KAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 129/328 (39%), Gaps = 46/328 (14%)
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+R Y PD + L+ + G+ R A+ ++K G + + Y LI
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPD----ASVYNALITAHLHT 181
Query: 172 GETGAALQLLRQ-------IEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
+ AL+ +R IE +V YN ++++ + V L+ ++ + +SP
Sbjct: 182 RDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSP 241
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
DV+T+N ++ + G +++ M+ KPD+ T + LI + K+++ ++
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY---------- 334
+++++ +P + +N++I Y + KA ++ M P TY
Sbjct: 302 KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Query: 335 -------------------------NIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
N M+ C + + EA LFH + PDA TY
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGI 397
L + + L+ +M +GI
Sbjct: 422 KFLYKAYTKADMKEQVQILMKKMEKDGI 449
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 111/496 (22%), Positives = 185/496 (37%), Gaps = 86/496 (17%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIAT 86
S + A +F ML P FN ++ SL + ++L APD T
Sbjct: 311 SGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRT 369
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA---INFHD 143
ILI+ + A + ++ +PD + TL+ + + A I D
Sbjct: 370 YNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMD 429
Query: 144 D-----------------VKA----------KGFQFQVDRVSVTYRFLINELCEVGETGA 176
D V+A K F + S Y I+ E G
Sbjct: 430 DDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSE 489
Query: 177 ALQLLRQIEE-EHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL--- 232
A ++ +E V YN +IK+ K A +L+ M+ ++PD TYNTL
Sbjct: 490 AERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQI 549
Query: 233 --------------------------------IYGFCAGGQLRKAVGFFNVMKMENIKPD 260
I F GQL A + M NI+PD
Sbjct: 550 LASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPD 609
Query: 261 VSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSH 320
V LI+A V+QA S V AM +A + N IYN+LI Y + + +A +
Sbjct: 610 VVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYR 669
Query: 321 TM---ATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWL 377
+ + PDV+T N MI+ +M+ +A ++F M + + + T+++++ +
Sbjct: 670 KLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYK 728
Query: 378 NLPHYMHAINLLAEM-----CSNGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFL 432
+ A + +M ++ ++Y S L D F + +E F +
Sbjct: 729 KNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKE----------M 778
Query: 433 IASHIVLRNPSFKATG 448
++S I + +FK+ G
Sbjct: 779 VSSGIQPDDSTFKSLG 794
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 152/375 (40%), Gaps = 46/375 (12%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
+ +N +L L + + SL ++ KGI P +T LI+ + G +A LG
Sbjct: 187 VIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLG 246
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFH-----DDVKAKGFQFQVDRVSVTYRF 163
K+ K QPD +++ E + A F D+ KA V S TY
Sbjct: 247 KMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADS---HVCLSSYTYNT 303
Query: 164 LINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKR 221
+I+ + G+ A + +++ EE +NT+I + + + L M L
Sbjct: 304 MIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKL-H 362
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
+PD TYN LI + +A +F MK + +KPD + L++A V++A
Sbjct: 363 CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAE 422
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA-----RF-LSHTMATRGVTPDVHT-- 333
++A M +VE + + + L Y + K+ RF ++ M++ G + ++
Sbjct: 423 GLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYG 482
Query: 334 -------------------------YNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAET 368
YN+MI S ++A LF M + PD T
Sbjct: 483 ERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCT 542
Query: 369 YSILIE--GWLNLPH 381
Y+ L++ ++PH
Sbjct: 543 YNTLVQILASADMPH 557
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 123/296 (41%), Gaps = 10/296 (3%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G+ PD T L+ + L K+ + Y D ++ G++
Sbjct: 535 GVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQL--- 591
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNT 196
N ++V + ++ ++ V Y LIN + G A+ + ++E + +YN+
Sbjct: 592 -NMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNS 650
Query: 197 IIKSMCEDKCVSDAYDLYNEMLL---KRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
+IK + + +A +Y ++L K PDV+T N +I + +RKA F+ MK
Sbjct: 651 LIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMK 710
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
+ + T ++ K + ++A + M + + + YN+++ + L +
Sbjct: 711 QRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFK 769
Query: 314 KARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
+A M + G+ PD T+ + + L M +A+ + K+IK E +
Sbjct: 770 EAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELW 825
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 10/226 (4%)
Query: 146 KAKGFQFQVDRVSVT-----YRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTII 198
K K + ++D VT Y ++ +C+ G+ A++L ++++ DV YNT+I
Sbjct: 207 KCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVI 266
Query: 199 KSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
+++ + V ++ EM + P+V T+NT+I C G++R A + M +
Sbjct: 267 RAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQ 326
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFL 318
PD T L L K + S+ MI++ V P + Y L+ + + ++
Sbjct: 327 PDSITYMCLFSRL---EKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYV 383
Query: 319 SHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKP 364
TM G TPD YN +I L M+D A M + + P
Sbjct: 384 WKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 8/223 (3%)
Query: 189 TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGF 248
++ +++N I++ + + + +M + ++ D+F+Y+ + C G+ KAV
Sbjct: 187 SNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKL 246
Query: 249 FNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCL 308
+ MK +K DV + +I A+ + V+ V M + EPNV +NT+I C
Sbjct: 247 YKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCE 306
Query: 309 INQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAET 368
+M A + M RG PD TY + S L + E +SLF M ++P +T
Sbjct: 307 DGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPS---EILSLFGRMIRSGVRPKMDT 363
Query: 369 YSILI---EGWLNLPHYMHAINLLAEM--CSNGIAYTSKLDAI 406
Y +L+ E W L ++ + E + AY + +DA+
Sbjct: 364 YVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDAL 406
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 14/214 (6%)
Query: 13 SLFMRYHSHSPRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLS 72
S++M S +P+ AV + M S R + +N ++ ++ + +
Sbjct: 228 SIYMDIMCKSGKPW-----KAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVF 282
Query: 73 QQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLN 132
+++ +G P++AT +I C GRM A+ +L ++ KR QPD+ L L
Sbjct: 283 REMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKP 342
Query: 133 GEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEE--EHTD 190
EI S F +++ G + ++D TY L+ + G L + + ++E + D
Sbjct: 343 SEILSL--FGRMIRS-GVRPKMD----TYVMLMRKFERWGFLQPVLYVWKTMKESGDTPD 395
Query: 191 VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
YN +I ++ + + A + EM+ + +SP
Sbjct: 396 SAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 100/202 (49%), Gaps = 1/202 (0%)
Query: 196 TIIKSMCEDKCVSDAYDLYNEM-LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKM 254
++ +C + ++ A +L EM L+K + ++ T+ ++I + +M+
Sbjct: 215 VVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEK 274
Query: 255 ENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTK 314
E++ D+ + LI KV++A +V M + ++YN +++GY + K
Sbjct: 275 ESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEK 334
Query: 315 ARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIE 374
L M++RGVTP+ TY ++++ LC + + EAMS + + + + + D E YS L E
Sbjct: 335 VIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSE 394
Query: 375 GWLNLPHYMHAINLLAEMCSNG 396
+ ++ ++AEM +G
Sbjct: 395 ECYRVGMIDKSLEVVAEMIRDG 416
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 35/243 (14%)
Query: 121 ALTTLMKGLCLNGEIRSAINFHDD------VKAKGFQFQ--------------------- 153
+LT ++ LC NGEI A ++ VKA F+
Sbjct: 212 SLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKL 271
Query: 154 VDRVSV-----TYRFLINELCEVGETGAALQLLRQIEEEHTDVQ--MYNTIIKSMCEDKC 206
+++ SV +Y+ LI+ G+ A +L+ + ++ V+ +YN I+
Sbjct: 272 MEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGL 331
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
V +LY+EM + ++P+ TY L+ G C G++ +A+ F N +++ + D
Sbjct: 332 VEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYST 391
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
L + + ++ VVA MI+ P I L D +N+ +A+ L + G
Sbjct: 392 LSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNR-KEAQMLITIVVKCG 450
Query: 327 VTP 329
+ P
Sbjct: 451 IKP 453
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%)
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQAN 281
I PDV +YNTLI G C G +AV + ++ + +KPD T + L+H + K ++
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGE 232
Query: 282 SVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
+ A M++ +V+ ++ YN + G + N+ + L + + PDV T+ MI
Sbjct: 233 QIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGF 292
Query: 342 CTSNMMDEAMSLFHYMDLKDIKP 364
+ +DEA++ + ++ +P
Sbjct: 293 VSEGKLDEAITWYKEIEKNGCRP 315
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 78/164 (47%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
DV YNT+IK +C ++A L +E+ K + PD T+N L++ G+ + +
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIW 235
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
M +N+K D+ + + + L E K ++ S+ + ++P+VF + +I G+
Sbjct: 236 ARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSE 295
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSL 353
++ +A + G P +N ++ +C + ++ A L
Sbjct: 296 GKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYEL 339
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 41/209 (19%)
Query: 240 GQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI-KASVEPNVFI 298
G A F+ M N K + + L++A +K + + K S+EP+V
Sbjct: 120 GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVAS 179
Query: 299 YNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMIS--------------W---- 340
YNTLI G C T+A L + +G+ PD T+NI++ W
Sbjct: 180 YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMV 239
Query: 341 -----------------LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYM 383
L N +E +SLF + ++KPD T++ +I+G+++
Sbjct: 240 EKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLD 299
Query: 384 HAINLLAEMCSNG-----IAYTSKLDAIC 407
AI E+ NG + S L AIC
Sbjct: 300 EAITWYKEIEKNGCRPLKFVFNSLLPAIC 328
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 82/205 (40%), Gaps = 2/205 (0%)
Query: 159 VTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNE 216
+Y LI LC G A+ L+ +IE + D +N ++ + ++
Sbjct: 178 ASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWAR 237
Query: 217 MLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERK 276
M+ K + D+ +YN + G + + V F+ +K +KPDV T +I E K
Sbjct: 238 MVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGK 297
Query: 277 VKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNI 336
+ +A + + K P F++N+L+ C + A L + + + D
Sbjct: 298 LDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQE 357
Query: 337 MISWLCTSNMMDEAMSLFHYMDLKD 361
++ L + DEA + D
Sbjct: 358 VVDALVKGSKQDEAEEIVELAKTND 382
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 97/245 (39%), Gaps = 42/245 (17%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELK-GIAPDIATLTIL 90
NA F M FN +L + V + + ++L K I PD+A+ L
Sbjct: 124 NAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTL 183
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
I C G A +++ +I + +PD
Sbjct: 184 IKGLCGKGSFTEAVALIDEIENKGLKPD-------------------------------- 211
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVS 208
+T+ L++E G+ Q+ ++ E++ D++ YN + + +
Sbjct: 212 -------HITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSE 264
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
+ L++++ + PDVFT+ +I GF + G+L +A+ ++ ++ +P + L+
Sbjct: 265 EMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLL 324
Query: 269 HALCK 273
A+CK
Sbjct: 325 PAICK 329
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 90/201 (44%), Gaps = 6/201 (2%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + +N ++ L + AV+L ++E KG+ PD T IL++ G+ +
Sbjct: 175 PDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQI 234
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
+++++ + D + + GL + + ++ D K KG + + D T+ +I
Sbjct: 235 WARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFD--KLKGNELKPD--VFTFTAMIK 290
Query: 167 ELCEVGETGAALQLLRQIEEEHTDVQ--MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
G+ A+ ++IE+ ++N+++ ++C+ + AY+L E+ KR+
Sbjct: 291 GFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLV 350
Query: 225 DVFTYNTLIYGFCAGGQLRKA 245
D ++ G + +A
Sbjct: 351 DEAVLQEVVDALVKGSKQDEA 371
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 17/238 (7%)
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM- 252
Y+ I+ + K + D+ N++L R + YN++I+ F G+L +AV F M
Sbjct: 175 YHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMV 234
Query: 253 --KMENIKPDVSTCDPLIHALCKERK--------VKQANSVVAAMIKASVEPNVFIYNTL 302
K +P + T L AL ++ S+ M+ + +EP+VF N L
Sbjct: 235 TSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCL 294
Query: 303 IDGYCLINQMTKARFLSHTMA-TRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKD 361
+ GY L + A + H M+ P+ TY+ +I LC A L M K
Sbjct: 295 VKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKG 354
Query: 362 IKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG-----IAYTSKLDAICNDYNFDD 414
P+ ++Y+ L+ + A+ L EM NG I+Y + +D C +D+
Sbjct: 355 FVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDE 412
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 2/162 (1%)
Query: 213 LYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKM-ENIKPDVSTCDPLIHAL 271
L+ +M+ I PDVF N L+ G+ + A+ F+ M + + +P+ T D LIH L
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 272 CKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDV 331
C + + A +++ M PN YN+L++ + L ++ A M G D
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 394
Query: 332 HTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
+Y ++ C DEA L + K + D ++Y L+
Sbjct: 395 ISYRTLVDESCRKGKYDEATRLLEMLREKQL-VDRDSYDKLV 435
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 85/228 (37%), Gaps = 12/228 (5%)
Query: 193 MYNTIIKSMCEDKCVSDAYDLYNEMLLKR---ISPDVFTYNTLIYGFCAGGQ-------- 241
+YN+II + + A +++ M+ + P + TY+ L G
Sbjct: 209 LYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVY 268
Query: 242 LRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM-IKASVEPNVFIYN 300
+ F M I+PDV + L+ V A + M + EPN F Y+
Sbjct: 269 METVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYD 328
Query: 301 TLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLK 360
LI G C + AR L M +G P+ +YN +++ S +D+A+ M
Sbjct: 329 YLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIEN 388
Query: 361 DIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKLDAICN 408
D +Y L++ Y A LL + + D + N
Sbjct: 389 GRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVN 436
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%)
Query: 191 VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFN 250
V +N ++ + + L N+M K + P +N ++ + A+ F
Sbjct: 423 VSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFK 482
Query: 251 VMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLIN 310
M KP V + L+ AL K + +A V MIK +EPN++ Y T+
Sbjct: 483 AMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQ 542
Query: 311 QMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
+ L MA++G+ P V T+N +IS + + A FH M ++++P+ TY
Sbjct: 543 KFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYE 602
Query: 371 ILIEGWLNLPHYMHAINLLAEMCSNGIAYTSK 402
+LIE N A L + + G+ +SK
Sbjct: 603 MLIEALANDAKPRLAYELHVKAQNEGLKLSSK 634
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 94/212 (44%), Gaps = 7/212 (3%)
Query: 137 SAINFHDDVKAKGFQ---FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQM 193
+A+ ++D+ +G + + V + L++ + G ++LL ++E++ Q
Sbjct: 399 AALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQR 458
Query: 194 --YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNV 251
+N ++ + + + A ++ M+ P V +Y L+ G +A +N
Sbjct: 459 RHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNH 518
Query: 252 MKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQ 311
M I+P++ + L ++K ++++ M +EP+V +N +I G C N
Sbjct: 519 MIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISG-CARNG 577
Query: 312 MTKARF-LSHTMATRGVTPDVHTYNIMISWLC 342
++ + H M + V P+ TY ++I L
Sbjct: 578 LSGVAYEWFHRMKSENVEPNEITYEMLIEALA 609
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 6/198 (3%)
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM-KMENIKPDVSTCDPLIHALCKERKVKQA 280
I V + N L++ ++A + M KM I+PD+ T + +I LC+ +
Sbjct: 142 IPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSS 201
Query: 281 NSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISW 340
S+VA M + ++P + +IDG+ + + R + M GV V TYNIMI
Sbjct: 202 YSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQC 261
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-- 398
LC EA +L + ++P++ TYS+LI G+ + + A+NL M NG
Sbjct: 262 LCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPD 321
Query: 399 ---YTSKLDAICNDYNFD 413
Y + + +C +F+
Sbjct: 322 SECYFTLIHCLCKGGDFE 339
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
D++ YN +I+ +CE S +Y + EM K I P ++ +I GF + +
Sbjct: 181 DLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVM 240
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
+M + V+T + +I LCK +K +A +++ ++ + PN Y+ LI G+C
Sbjct: 241 RMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSE 300
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
+ +A L M G PD Y +I LC + A+ L K+ P
Sbjct: 301 ENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVM 360
Query: 370 SILIEGWLNLPHYMHAINLLA 390
L+ G + A L+A
Sbjct: 361 KWLVNGLASRSKVDEAKELIA 381
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 3/200 (1%)
Query: 177 ALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEM-LLKRISPDVFTYNTLI 233
++Q R +E+ V+ N ++ + K +A +Y EM + I PD+ TYN +I
Sbjct: 130 SIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMI 189
Query: 234 YGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVE 293
C G + M+ + IKP ++ +I KE K + V+ M + V
Sbjct: 190 RVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVH 249
Query: 294 PNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSL 353
V YN +I C + +A+ L + + + P+ TY+++I C+ +DEAM+L
Sbjct: 250 VGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNL 309
Query: 354 FHYMDLKDIKPDAETYSILI 373
F M KPD+E Y LI
Sbjct: 310 FEVMVCNGYKPDSECYFTLI 329
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 144/343 (41%), Gaps = 53/343 (15%)
Query: 8 FLSIPSLFMRYHSHSPRPFSHE-AVNAV-------------SSFHNMLSMRPAPPITQFN 53
F+++ L + + P P S AV A+ +F N+ + N
Sbjct: 91 FVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLN 150
Query: 54 NILGSLVRMNHYPTAVSLSQQL-ELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILK 112
+L + + Y A + ++ ++ GI PD+ T +I C G + ++S++ ++ +
Sbjct: 151 ALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMER 210
Query: 113 RAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVG 172
+ +P + GL ++G F+ + K D V R +
Sbjct: 211 KWIKPTAASF-----GLMIDG-------FYKEEK-------FDEVRKVMRMM-------D 244
Query: 173 ETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL 232
E G H V YN +I+ +C+ K ++A L + ++ R+ P+ TY+ L
Sbjct: 245 EFGV-----------HVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLL 293
Query: 233 IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASV 292
I+GFC+ L +A+ F VM KPD LIH LCK + A + ++ +
Sbjct: 294 IHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNW 353
Query: 293 EPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYN 335
P+ + L++G +++ +A+ L + + T +V +N
Sbjct: 354 VPSFSVMKWLVNGLASRSKVDEAKELIAVVKEK-FTRNVDLWN 395
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 138/305 (45%), Gaps = 20/305 (6%)
Query: 66 PTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTL 125
P + +E G++ DI LI+C+ G + ++ K+ ++ + DT + ++
Sbjct: 134 PVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAM--KLFEKMSERDTVSWNSM 191
Query: 126 MKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIE 185
+ GL GE+R A D++ + +++ +++ E A +L ++
Sbjct: 192 LGGLVKAGELRDARRLFDEMPQRDL--------ISWNTMLDGYARCREMSKAFELFEKMP 243
Query: 186 EEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKA 245
E +T ++T++ + + A ++++M L + +V T+ +I G+ G L++A
Sbjct: 244 ERNT--VSWSTMVMGYSKAGDMEMARVMFDKMPLP--AKNVVTWTIIIAGYAEKGLLKEA 299
Query: 246 VGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKAS-VEPNVFIYNTLID 304
+ M +K D + ++ A C E + + +++K S + N ++ N L+D
Sbjct: 300 DRLVDQMVASGLKFDAAAVISIL-AACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLD 358
Query: 305 GYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKP 364
Y + KA + + + + D+ ++N M+ L EA+ LF M + I+P
Sbjct: 359 MYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRP 414
Query: 365 DAETY 369
D T+
Sbjct: 415 DKVTF 419
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 118/275 (42%), Gaps = 53/275 (19%)
Query: 164 LINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEM------ 217
LI+ L +T A+++ Q++E +V + N++I++ ++ A+ +++EM
Sbjct: 57 LISALSLCRQTNLAVRVFNQVQE--PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLF 114
Query: 218 --------LLKR---------------------ISPDVFTYNTLI--YGFCAGGQLRKAV 246
LLK +S D++ N LI Y C G +R A+
Sbjct: 115 ADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAM 174
Query: 247 GFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGY 306
F M + D + + ++ L K +++ A + M + ++ +NT++DGY
Sbjct: 175 KLFEKMS----ERDTVSWNSMLGGLVKAGELRDARRLFDEM----PQRDLISWNTMLDGY 226
Query: 307 CLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDA 366
+M+KA L M R +++ M+ + M+ A +F M L +
Sbjct: 227 ARCREMSKAFELFEKMPERNTV----SWSTMVMGYSKAGDMEMARVMFDKMPLP--AKNV 280
Query: 367 ETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTS 401
T++I+I G+ A L+ +M ++G+ + +
Sbjct: 281 VTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDA 315
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/412 (18%), Positives = 173/412 (41%), Gaps = 54/412 (13%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+N++LG LV+ A L ++ + D+ + +++ + M+ AF + K+
Sbjct: 188 WNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMP 243
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDV-----------------KAKGFQFQV 154
+R +T + +T++ G G++ A D + KG +
Sbjct: 244 ER----NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEA 299
Query: 155 DR-----VSVTYRF----LINELCEVGETGA---ALQLLRQIEEEHTDVQMY--NTIIKS 200
DR V+ +F +I+ L E+G +++ ++ + Y N ++
Sbjct: 300 DRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDM 359
Query: 201 MCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPD 260
+ + A+D++N++ K D+ ++NT+++G G ++A+ F+ M+ E I+PD
Sbjct: 360 YAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPD 415
Query: 261 VSTCDPLIHALCKERKVKQANSVVAAMIKA-SVEPNVFIYNTLIDGYCLINQMTKARFLS 319
T ++ + + + +M K + P V Y L+D + ++ +A +
Sbjct: 416 KVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVV 475
Query: 320 HTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKP-DAETYSILIEGWLN 378
TM + P+V + ++ N +D A + +L + P D YS+L +
Sbjct: 476 QTMP---MEPNVVIWGALLGACRMHNEVDIAKEVLD--NLVKLDPCDPGNYSLLSNIYAA 530
Query: 379 LPHYMHAINLLAEMCSNGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGDAD 430
+ ++ ++M S G+ S ++ +D I +F + ++ +D
Sbjct: 531 AEDWEGVADIRSKMKSMGVEKPSGASSV----ELEDGIHEFTVFDKSHPKSD 578
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 162/401 (40%), Gaps = 71/401 (17%)
Query: 31 VNAVSSFHNMLSMR------PAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDI 84
++A SSF ++ R P P I +N I+ R NH+ A+ + ++L ++PD
Sbjct: 60 IHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDS 119
Query: 85 ATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDD 144
T L+ L + V ++ + + D L+ + SA +
Sbjct: 120 FTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEG 179
Query: 145 VKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQ------------ 192
+ +R V++ +++ + GE AL++ Q+ + DV+
Sbjct: 180 LPLP------ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK--MDVKPDWVALVSVLNA 231
Query: 193 ------------MYNTIIKSMCE-------------DKC--VSDAYDLYNEMLLKRISPD 225
++ +++K E KC V+ A L+++M SP+
Sbjct: 232 FTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK----SPN 287
Query: 226 VFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVA 285
+ +N +I G+ G R+A+ F+ M ++++PD + I A + ++QA S+
Sbjct: 288 LILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE 347
Query: 286 AMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSN 345
+ ++ +VFI + LID + + AR + R + DV ++ MI
Sbjct: 348 YVGRSDYRDDVFISSALIDMFAKCGSVEGARLV----FDRTLDRDVVVWSAMIVGYGLHG 403
Query: 346 MMDEAMSLFHYMDLKDIKPDAETYSILI----------EGW 376
EA+SL+ M+ + P+ T+ L+ EGW
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGW 444
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 73/171 (42%), Gaps = 16/171 (9%)
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
P +F +N +I G+ + A+ ++ M++ + PD T L+ A ++ V
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKAR--FLSHTMATRGVTPDVHTYNIMISWL 341
A + + + +VF+ N LI Y ++ AR F + R + ++ ++S
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV----SWTAIVSAY 197
Query: 342 CTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
+ EA+ +F M D+KPD W+ L ++A L ++
Sbjct: 198 AQNGEPMEALEIFSQMRKMDVKPD----------WVALVSVLNAFTCLQDL 238
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 8/180 (4%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
+V + N++I C+ K V A ++ ++ S + ++N +I GF G+ A+ +F
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQ----SRTLVSWNAMILGFAQNGRPIDALNYF 426
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
+ M+ +KPD T +I A+ + A + ++++ ++ NVF+ L+D Y
Sbjct: 427 SQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKC 486
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
+ AR + M+ R VT T+N MI T A+ LF M IKP+ T+
Sbjct: 487 GAIMIARLIFDMMSERHVT----TWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTF 542
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 121/292 (41%), Gaps = 44/292 (15%)
Query: 88 TILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALT----TLMKGLCLNGEIRSAINF-- 141
T L++ FC G ++ A R ++P + L T++KG ++ A+ F
Sbjct: 73 TKLVSLFCRYGSVDEA--------ARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFV 124
Query: 142 ---HDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIE----EEHTDVQMY 194
+DDV+ + F TY L +V A L++ ++I + + ++
Sbjct: 125 RMRYDDVEPVVYNF-------TY------LLKVCGDEAELRVGKEIHGLLVKSGFSLDLF 171
Query: 195 NTIIKSMCEDKC--VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
KC V++A +++ M + D+ ++NT++ G+ G R A+ M
Sbjct: 172 AMTGLENMYAKCRQVNEARKVFDRMPER----DLVSWNTIVAGYSQNGMARMALEMVKSM 227
Query: 253 KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQM 312
EN+KP T ++ A+ R + + +++ + V I L+D Y +
Sbjct: 228 CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSL 287
Query: 313 TKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKP 364
AR L M R V ++N MI + EAM +F M + +KP
Sbjct: 288 ETARQLFDGMLERNVV----SWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 138/317 (43%), Gaps = 34/317 (10%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G + D+ +T L N + ++N A V ++ +R D + T++ G NG R A
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER----DLVSWNTIVAGYSQNGMARMA 220
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH---------T 189
+ VK+ + + ++ +++ L V +AL+L+ +E H +
Sbjct: 221 LEM---VKS----MCEENLKPSFITIVSVLPAV----SALRLISVGKEIHGYAMRSGFDS 269
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
V + ++ + + A L++ ML + +V ++N++I + ++A+ F
Sbjct: 270 LVNISTALVDMYAKCGSLETARQLFDGMLER----NVVSWNSMIDAYVQNENPKEAMLIF 325
Query: 250 NVMKMENIKP-DVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCL 308
M E +KP DVS L HA +++ + ++ ++ NV + N+LI YC
Sbjct: 326 QKMLDEGVKPTDVSVMGAL-HACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCK 384
Query: 309 INQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAET 368
++ A + + +R + ++N MI + +A++ F M + +KPD T
Sbjct: 385 CKEVDTAASMFGKLQSRTLV----SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Query: 369 YSILIEGWLNLPHYMHA 385
Y +I L HA
Sbjct: 441 YVSVITAIAELSITHHA 457
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 147/330 (44%), Gaps = 27/330 (8%)
Query: 86 TLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDV 145
TL+ + L ++ A + + QP+ A + + L NG+I+ A
Sbjct: 109 TLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTV---- 164
Query: 146 KAKGFQFQVDRVSV---TYRFLINELCEVGETGAALQLLRQIEEEHT-----DVQMYNTI 197
F+F + +V TY ++ + EV +AL++ R++E E DV +YNT
Sbjct: 165 ----FEFMRKKENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTA 220
Query: 198 IKSMCEDKCVSDAYDLYNEMLLKRISPD-----VFTYNTLIYGFCAGGQLRKAVGFFNVM 252
I S+C +++ Y+ E + + + D TY+ L+ F G+ A+ ++ M
Sbjct: 221 I-SLCGR--INNVYE--TERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEM 275
Query: 253 KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQM 312
I +I A KE K A + +M+K ++PN+ NTLI+ ++
Sbjct: 276 VNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKV 335
Query: 313 TKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAE-TYSI 371
+ + + G PD +T+N +++ L +N ++ + LF + +++ E Y+
Sbjct: 336 GLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNT 395
Query: 372 LIEGWLNLPHYMHAINLLAEMCSNGIAYTS 401
+ L ++ A+ LL EM +G+ ++
Sbjct: 396 AMVSCQKLGYWEKAVKLLYEMEGSGLTVST 425
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/414 (19%), Positives = 167/414 (40%), Gaps = 42/414 (10%)
Query: 56 LGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAY 115
L L R++ +A+ L + G+ P+ ++C G + AF+V + +++
Sbjct: 114 LRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVF-EFMRKKE 172
Query: 116 QPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ----------------------FQ 153
+ ++K + SA+ +++ + + ++
Sbjct: 173 NVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYE 232
Query: 154 VDRV------------SVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQ---MYNTII 198
+R+ +TY L++ G + AL + ++ ++ MY I
Sbjct: 233 TERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMIS 292
Query: 199 KSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
E+K A ++ ML K + P++ NTLI G++ ++V+K K
Sbjct: 293 ACTKEEK-WDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHK 351
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKAS--VEPNVFIYNTLIDGYCLINQMTKAR 316
PD T + L+ AL K + + + MI++ N ++YNT + + KA
Sbjct: 352 PDEYTWNALLTALYKANRYEDVLQLFD-MIRSENLCCLNEYLYNTAMVSCQKLGYWEKAV 410
Query: 317 FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
L + M G+T +YN++IS S A+ ++ +M +D KP+ TY L+
Sbjct: 411 KLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSC 470
Query: 377 LNLPHYMHAINLLAEMCSNGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGDAD 430
+ + ++L ++ + Y + + +C F E +++ +E G + D
Sbjct: 471 IWGSLWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPD 524
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 132/327 (40%), Gaps = 27/327 (8%)
Query: 65 YPTAVSLSQQLE-----------LKG---IAPDIATLTILINCFCHLGRMNYAFSVLGKI 110
Y TA+SL ++ +KG I +I T ++L++ F GR A V ++
Sbjct: 217 YNTAISLCGRINNVYETERIWRVMKGDGHIGTEI-TYSLLVSIFVRCGRSELALDVYDEM 275
Query: 111 LKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCE 170
+ A+ ++ + A+ + KG + + V LIN L +
Sbjct: 276 VNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNL----VACNTLINSLGK 331
Query: 171 VGETGAALQLLRQIEE--EHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP-DVF 227
G+ G ++ ++ D +N ++ ++ + D L++ + + + + +
Sbjct: 332 AGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEY 391
Query: 228 TYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
YNT + G KAV M+ + S+ + +I A K RK K A V M
Sbjct: 392 LYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHM 451
Query: 288 IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMM 347
+ +PN F Y +L+ C+ + + + V PDV YN I +C
Sbjct: 452 AQRDCKPNTFTYLSLVRS-CIWGSL----WDEVEDILKKVEPDVSLYNAAIHGMCLRREF 506
Query: 348 DEAMSLFHYMDLKDIKPDAETYSILIE 374
A L+ M ++PD +T +++++
Sbjct: 507 KFAKELYVKMREMGLEPDGKTRAMMLQ 533
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 110/291 (37%), Gaps = 55/291 (18%)
Query: 55 ILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRA 114
++ + + + A+ + Q + KG+ P++ LIN G++ F V +
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 115 YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF----QFQVDRVSVTYRFLINELCE 170
++PD L+ L + D ++++ ++ + V+ + +
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQ-------K 402
Query: 171 VGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCEDKCVSD-AYDLYNEMLLKRISPDVF 227
+G A++LL ++E V YN +I S CE S A +Y M + P+ F
Sbjct: 403 LGYWEKAVKLLYEMEGSGLTVSTSSYNLVI-SACEKSRKSKVALLVYEHMAQRDCKPNTF 461
Query: 228 TYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
TY +L+ C G L V +++K
Sbjct: 462 TYLSLVRS-CIWGSLWDEVE--DILK---------------------------------- 484
Query: 288 IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMI 338
VEP+V +YN I G CL + A+ L M G+ PD T +M+
Sbjct: 485 ---KVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMML 532
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 193 MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
+Y+ I +S+ +A ++ M PD TY+ L++G C +L +A G + M
Sbjct: 372 VYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQM 431
Query: 253 KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQM 312
+ + PD+ T LI CK ++ +A + A M++ + + + + LIDG+ + N+
Sbjct: 432 EAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKF 491
Query: 313 TKAR-FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
A FL + V P TY ++I L +EA+ L M ++ AE +
Sbjct: 492 EGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAF 549
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 96/247 (38%), Gaps = 38/247 (15%)
Query: 187 EHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAV 246
+H+ V YN ++ + V++ + + +EM D+ TY + F + + V
Sbjct: 260 QHSTV-TYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETV 318
Query: 247 GFFNVMKMENIKPDVSTC-------------------------------------DPLIH 269
+ M KP + C D +
Sbjct: 319 KLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHR 378
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTP 329
+L + +A + AM A EP+ Y+ L+ G C ++ +AR + M +G P
Sbjct: 379 SLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFP 438
Query: 330 DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLL 389
D+ T+ I+I C +N +D+A++ F M K D+ +LI+G++ + A L
Sbjct: 439 DIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFL 498
Query: 390 AEMCSNG 396
EM N
Sbjct: 499 MEMVKNA 505
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 2/213 (0%)
Query: 228 TYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
Y+ + + G+ +A M+ +PD T L+ LCK +++++A V+ M
Sbjct: 372 VYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQM 431
Query: 288 IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMM 347
P++ + LI G+C N++ KA M +G D + +++I N
Sbjct: 432 EAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKF 491
Query: 348 DEA-MSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM-CSNGIAYTSKLDA 405
+ A + L + ++KP TY +LI+ L + A++LL M N AY D
Sbjct: 492 EGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDG 551
Query: 406 ICNDYNFDDEIEKFMRYKETGGDADFLIASHIV 438
+ ++ +KF+ + F H++
Sbjct: 552 YLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVI 584
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 121/276 (43%), Gaps = 16/276 (5%)
Query: 13 SLFMRYHSHSPRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLS 72
SL +RY S SP P + V VS + + + ++ I SL + + A ++
Sbjct: 337 SLLLRYLSGSPNP-DLDLVFRVSRKYESTGKSLSKAV--YDGIHRSLTSVGRFDEAEEIT 393
Query: 73 QQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLN 132
+ + G PD T + L+ C R+ A VL ++ + PD T L++G C N
Sbjct: 394 KAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKN 453
Query: 133 GEIRSAINFHDDVKAKGFQFQVDRVSVTYR-FLINELCEVGETGAALQLLRQIEEEHTD- 190
E+ A+ ++ KGF + + V F+I+ E GA++ L+ ++ +
Sbjct: 454 NELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFE----GASIFLMEMVKNANVKP 509
Query: 191 -VQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAG-GQLRKAVGF 248
Y +I + + K +A DL +M+ K+ P Y G+ A G L A F
Sbjct: 510 WQSTYKLLIDKLLKIKKSEEALDLL-QMMKKQNYP---AYAEAFDGYLAKFGTLEDAKKF 565
Query: 249 FNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
+V+ ++ P + +I A +E ++ A +++
Sbjct: 566 LDVLSSKD-SPSFAAYFHVIEAFYREGRLTDAKNLL 600
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 142/342 (41%), Gaps = 47/342 (13%)
Query: 90 LINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKG 149
L + + G ++ A V +I R + A LM G NG+ AI D++ +G
Sbjct: 214 LADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQG 269
Query: 150 FQFQVDRVSVTYRFLINELCEVG--ETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCV 207
V+ VT ++ +G E G + + D + +++ C+ +
Sbjct: 270 ----VEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI 325
Query: 208 SDAYDLYNEMLLKRI-SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
Y EM+ R+ DV T+N +I G+ G + A+ +M++E +K D T
Sbjct: 326 E-----YAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLAT 380
Query: 267 LIHALCKERKVK-----------------------------QANSVVAA--MIKASVEPN 295
L+ A + +K + S+V A + ++VE +
Sbjct: 381 LMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKD 440
Query: 296 VFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFH 355
+ ++NTL+ Y +A L + M GV P+V T+N++I L + +DEA +F
Sbjct: 441 LILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFL 500
Query: 356 YMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
M I P+ +++ ++ G + AI L +M +G+
Sbjct: 501 QMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGL 542
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 135/320 (42%), Gaps = 15/320 (4%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
+ +N I+ V+ A+ + Q + L+ + D TL L++ + V
Sbjct: 340 VVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQC 399
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
++ +++ D +T+M G I A K F V++ + + L+
Sbjct: 400 YCIRHSFESDIVLASTVMDMYAKCGSIVDA--------KKVFDSTVEKDLILWNTLLAAY 451
Query: 169 CEVGETGAALQLL--RQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
E G +G AL+L Q+E +V +N II S+ + V +A D++ +M I P++
Sbjct: 452 AESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNL 511
Query: 227 FTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAA 286
++ T++ G G +A+ F M+ ++P+ + + A + ++
Sbjct: 512 ISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGY 571
Query: 287 MIKASVEPN-VFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSN 345
+I+ + V I +L+D Y + KA + + ++ N MIS
Sbjct: 572 IIRNLQHSSLVSIETSLVDMYAKCGDINKA----EKVFGSKLYSELPLSNAMISAYALYG 627
Query: 346 MMDEAMSLFHYMDLKDIKPD 365
+ EA++L+ ++ +KPD
Sbjct: 628 NLKEAIALYRSLEGVGLKPD 647
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 118/272 (43%), Gaps = 15/272 (5%)
Query: 68 AVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMK 127
A+++ +EL I T L+N +C +G + YA V R ++ D ++
Sbjct: 298 AIAIVNGMELDNILG-----TSLLNFYCKVGLIEYAEMVF----DRMFEKDVVTWNLIIS 348
Query: 128 GLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE 187
G G + AI ++ + ++ D V++ E + G +Q
Sbjct: 349 GYVQQGLVEDAIYMCQLMRLEKLKY--DCVTLATLMSAAARTENLKLGKEVQCYCIRHSF 406
Query: 188 HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVG 247
+D+ + +T++ + + DA +++ + K D+ +NTL+ + G +A+
Sbjct: 407 ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAESGLSGEALR 462
Query: 248 FFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC 307
F M++E + P+V T + +I +L + +V +A + M + + PN+ + T+++G
Sbjct: 463 LFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMV 522
Query: 308 LINQMTKARFLSHTMATRGVTPDVHTYNIMIS 339
+A M G+ P+ + + +S
Sbjct: 523 QNGCSEEAILFLRKMQESGLRPNAFSITVALS 554
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 129/329 (39%), Gaps = 37/329 (11%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+N +L + A+ L ++L+G+ P++ T ++I G+++ A + ++
Sbjct: 444 WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQ 503
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
P+ + TT+M G+ NG AI F ++ G + ++V
Sbjct: 504 SSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITV------------ 551
Query: 172 GETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVS---DAYDLY---------NEMLL 219
AL + H ++ II+++ VS D+Y ++
Sbjct: 552 -----ALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFG 606
Query: 220 KRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQ 279
++ ++ N +I + G L++A+ + ++ +KPD T ++ A + Q
Sbjct: 607 SKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQ 666
Query: 280 ANSVVAAMI-KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMI 338
A + ++ K S++P + Y ++D + KA L M + PD MI
Sbjct: 667 AIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFK---PDAR----MI 719
Query: 339 SWLCTSNMMDEAMSLFHYMDLKDIKPDAE 367
L S L Y+ K ++ + E
Sbjct: 720 QSLVASCNKQRKTELVDYLSRKLLESEPE 748
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 151/345 (43%), Gaps = 28/345 (8%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNIL-GSLVRMNHYPTAVSLSQQLELKGIAPDIATLTIL 90
A+ H + P P ++ N++L GS M T VSL ++E +G++PD T T +
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKT-VSLYTEMEKRGVSPDRYTFTFV 118
Query: 91 INCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGF 150
+ L + F+ GK+++ + + L+ G++ A DD AK
Sbjct: 119 LKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDD-SAKAH 177
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDA 210
+ V + + + + G+ A++L ++ + D +N +I + K + A
Sbjct: 178 K-------VAWSSMTSGYAKRGKIDEAMRLFDEM--PYKDQVAWNVMITGCLKCKEMDSA 228
Query: 211 YDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHA 270
+L++ K DV T+N +I G+ G ++A+G F M+ PDV T L+ A
Sbjct: 229 RELFDRFTEK----DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSA 284
Query: 271 LCKERKVKQANSV-VAAMIKASVEPNVF----IYNTLIDGYCLINQMTKARFLSHTMATR 325
++ + + + ASV +++ I+N LID Y + +A R
Sbjct: 285 CAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRA-----IEVFR 339
Query: 326 GVTP-DVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
GV D+ T+N +I L + + ++ +F M + P+ T+
Sbjct: 340 GVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTF 383
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 142/337 (42%), Gaps = 23/337 (6%)
Query: 45 PAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAF 104
P P ++ FN ++ + A+ L ++ GI PD T+ L+ C HL +
Sbjct: 193 PHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGK 252
Query: 105 SVLGKILKRA--YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYR 162
V G I +R Y + L+ E A D +K K + ++
Sbjct: 253 GVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMR--------SWN 304
Query: 163 FLINELCEVGETGAALQLLRQIEEEHTDVQMYNTII----KSMCEDKCVSDAYDLYNEML 218
++ +G+ AA + Q+ + D+ +N+++ K C+ + V + + Y +
Sbjct: 305 TMVVGFVRLGDMEAAQAVFDQMPKR--DLVSWNSLLFGYSKKGCDQRTVRELF--YEMTI 360
Query: 219 LKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVK 278
++++ PD T +LI G G+L ++ +K D LI CK ++
Sbjct: 361 VEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIE 420
Query: 279 QANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMI 338
+A V K + E +V ++ ++I G +A L M GVTP+ T ++
Sbjct: 421 RAFMV----FKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVL 476
Query: 339 SWLCTSNMMDEAMSLFHYMDLK-DIKPDAETYSILIE 374
+ S +++E + +F++M K P+ E Y L++
Sbjct: 477 TACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVD 513
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 73/180 (40%), Gaps = 9/180 (5%)
Query: 248 FFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC 307
F M + + T LI L + A + M+ V P++ YN L+DG C
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 308 LINQMTKARFLSH---------TMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
++ KA +++ +GV P+V TY MIS C +EA +LF M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYTSKLDAICNDYNFDDEIEK 418
PD+ TY+ LI L + L+ EM S A + + D D ++K
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDK 182
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 74/174 (42%), Gaps = 13/174 (7%)
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
+L+ EM + + + TY TLI G G A F M + + PD+ T + L+ L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 272 CKERKVKQANSVVAAMIK-----------ASVEPNVFIYNTLIDGYCLINQMTKARFLSH 320
CK K+++A +VA ++ V+PNV Y T+I G+C +A L
Sbjct: 62 CKNGKLEKA--LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 321 TMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIE 374
M G PD TYN +I + L M DA TY ++ +
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 11/158 (6%)
Query: 158 SVTYRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKC--------- 206
+VTY LI L + G+ A ++ +++ + D+ YN ++ +C++
Sbjct: 16 TVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGK 75
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
V D +DL+ + LK + P+V TY T+I GFC G +A F MK + PD T +
Sbjct: 76 VEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNT 135
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLID 304
LI A ++ + ++ M + Y + D
Sbjct: 136 LIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 11/175 (6%)
Query: 178 LQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYG 235
++L R++ + + Y T+I+ + + A +++ EM+ + PD+ TYN L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 236 FCAGGQLRKAV---------GFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAA 286
C G+L KA+ F + ++ +KP+V T +I CK+ ++A ++
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWL 341
M + P+ YNTLI + + L M + D TY ++ L
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 18/195 (9%)
Query: 69 VSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKG 128
+ L +++ +G+ + T T LI G + A + +++ PD L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 129 LCLNGEIRSAI---------NFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQ 179
LC NG++ A+ + + KG + V VTY +I+ C+ G A
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNV----VTYTTMISGFCKKGFKEEAYT 116
Query: 180 LLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFC 237
L R+++E+ D YNT+I++ D + + +L EM R + D TY L+
Sbjct: 117 LFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDML 175
Query: 238 AGGQLRKAVGFFNVM 252
G+L K GF ++
Sbjct: 176 HDGRLDK--GFLEML 188
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 104/244 (42%), Gaps = 6/244 (2%)
Query: 188 HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVG 247
H + +MYN +I + + + EM+ +P+ T+N L+ + +K
Sbjct: 661 HWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNE 720
Query: 248 FFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC 307
F + K + DV + + +I A K + +S + M ++ YNTL+D Y
Sbjct: 721 LFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYG 779
Query: 308 LINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAE 367
QM K R + M PD +TYNIMI+ +DE + + + PD
Sbjct: 780 KDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLC 839
Query: 368 TYSILIEGWLNLPHYMHAINLLAEMCSNGI-----AYTSKLDAICNDYNFDDEIEKFMRY 422
+Y+ LI+ + A+ L+ EM I YT+ + A+ + F + I+ +
Sbjct: 840 SYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWM 899
Query: 423 KETG 426
K+ G
Sbjct: 900 KQMG 903
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 128/311 (41%), Gaps = 40/311 (12%)
Query: 137 SAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQI---EEEHTDVQM 193
+AI F D ++ G ++ V Y ++ L E A L++++ E Q+
Sbjct: 156 NAIKFFDWMRCNG---KLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQV 212
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLI-------------YGF---- 236
+NT+I + + V A ++ ML + P+V T L+ + F
Sbjct: 213 FNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMR 272
Query: 237 -----CAGG---------QLR---KAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQ 279
C +LR KA ++MK + ++ + +++A ++ K++
Sbjct: 273 KFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMEL 332
Query: 280 ANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMIS 339
A S++ +M A PN+ YNTLI GY I +M A+ L H + G+ PD +Y MI
Sbjct: 333 AESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIE 392
Query: 340 WLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAY 399
++ +EA + + KP++ LI AI + +M G Y
Sbjct: 393 GWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQY 452
Query: 400 TSKLDAICNDY 410
+S L I Y
Sbjct: 453 SSILGIILQAY 463
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 79/173 (45%)
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
DV +YNT+I + M+ + + + L+ A K++++++ S++
Sbjct: 732 DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSIL 791
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
M K++ P+ + YN +I+ Y + + + + G+ PD+ +YN +I
Sbjct: 792 KRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIG 851
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
M++EA+ L M ++I PD TY+ L+ ++ AI M GI
Sbjct: 852 GMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 142/329 (43%), Gaps = 40/329 (12%)
Query: 59 LVRMNHYPT------AVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILK 112
LV +N Y A S+ +E G +P+I LI + + +M A + ++
Sbjct: 318 LVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCN 377
Query: 113 RAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVG 172
+PD T+ ++++G A +++ ++K G++ S LIN + G
Sbjct: 378 IGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPN----SFNLFTLINLQAKYG 433
Query: 173 ETGAALQLLRQIEEEHTDVQ-MYNTIIKSMCED----------KCVSDAYDLYNEMLLKR 221
+ A++ + E+ T + Y++I+ + + CV +N + L +
Sbjct: 434 DRDGAIKTI----EDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKG-SFHNHIRLNQ 488
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL---CKER-KV 277
S +++L+ + G + +G K D + L H L CKE ++
Sbjct: 489 TS-----FSSLVMAYVKHGMVDDCLGLLREKKWR----DSAFESHLYHLLICSCKESGQL 539
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIM 337
A + +++ E N+ I +T+ID Y ++ + ++A L + + GV D ++I+
Sbjct: 540 TDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIV 599
Query: 338 ISWLCTSNMMDEAMSLFHYMD-LKDIKPD 365
+ + ++EA S+ MD KDI PD
Sbjct: 600 VRMYVKAGSLEEACSVLEIMDEQKDIVPD 628
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 152/370 (41%), Gaps = 42/370 (11%)
Query: 24 RPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPD 83
+ F EA + FH + ++ P T + +++ R ++Y A Q+L+ G P+
Sbjct: 361 KIFKMEAAQGL--FHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPN 418
Query: 84 IATLTILINCFCHLGRMNYAF--------------SVLGKILKRAYQP--DTTALTTLMK 127
L LIN G + A S+LG IL+ AY+ + ++K
Sbjct: 419 SFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQ-AYEKVGKIDVVPCVLK 477
Query: 128 GLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE 187
G +FH+ ++ ++ L+ + G L LLR+ +
Sbjct: 478 G-----------SFHNHIRLN---------QTSFSSLVMAYVKHGMVDDCLGLLREKKWR 517
Query: 188 HT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKA 245
+ + +Y+ +I S E ++DA +YN + ++ +T+I + G+ +A
Sbjct: 518 DSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEA 577
Query: 246 VGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAM-IKASVEPNVFIYNTLID 304
+ +K + D ++ K +++A SV+ M + + P+V+++ ++
Sbjct: 578 EKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLR 637
Query: 305 GYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKP 364
Y + K + L + + G+ + YN +I+ + +DE F M P
Sbjct: 638 IYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTP 697
Query: 365 DAETYSILIE 374
+ T+++L++
Sbjct: 698 NTVTFNVLLD 707
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 31/231 (13%)
Query: 189 TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGF 248
+++Q Y+ +I +C+ V ++Y EM + ++PDV YN LI C +R A
Sbjct: 395 SELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKL 454
Query: 249 FNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCL 308
++ M +E K +++T + LI L +E + +++ + M++ +EP+ IY +LI+G C
Sbjct: 455 WDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCK 514
Query: 309 INQMTKARFL-------SHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLF------- 354
++ A + H TR V + + LC++ EA L
Sbjct: 515 ETKIEAAMEVFRKCMERDHKTVTRRVLSE------FVLNLCSNGHSGEASQLLREREHLE 568
Query: 355 ----HYMDLKDIKPDAETYSILIE--GWLN--LPHYMHAI--NLLAEMCSN 395
H + LK + DA+ I I W+ P +H I +LLA CS+
Sbjct: 569 HTGAHVVLLKCV-ADAKEVEIGIRHMQWIKEVSPSLVHTISSDLLASFCSS 618
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 88/187 (47%), Gaps = 6/187 (3%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
+AV M+S P I + + +L R + + + L KG ++ + +++I
Sbjct: 345 SAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMI 404
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ C GR+ +++ L ++ K PD + L++ C IR A D++ +G +
Sbjct: 405 SFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCK 464
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSD 209
+ TY LI +L E GE +L+L ++ E D +Y ++I+ +C++ +
Sbjct: 465 MNL----TTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEA 520
Query: 210 AYDLYNE 216
A +++ +
Sbjct: 521 AMEVFRK 527
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/365 (18%), Positives = 139/365 (38%), Gaps = 13/365 (3%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+++I SL + +L +Q++ I D + LI+ + AF VL +
Sbjct: 85 YHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAF 144
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
+ L+ GL +G A ++ KG ++ + I C
Sbjct: 145 STGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLN----TLGFGVYIGWFCRS 200
Query: 172 GETGAALQLLRQIEEEHTDVQ---MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFT 228
ET L+L+ ++++ + ++ + I+ S+C+ DA+ + E+ PD
Sbjct: 201 SETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMA 260
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
Y + F G L + + + P S I L +++ +A V ++
Sbjct: 261 YRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIV 320
Query: 289 KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMD 348
+ I + LI ++ + FL + ++T G P + T + + LC + D
Sbjct: 321 SGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVST-GKLPAIRTLSKLSKNLCRHDKSD 379
Query: 349 EAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA-----YTSKL 403
+ + + K + ++YS++I + L EM G+A Y + +
Sbjct: 380 HLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALI 439
Query: 404 DAICN 408
+A C
Sbjct: 440 EACCK 444
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 153/405 (37%), Gaps = 54/405 (13%)
Query: 9 LSIPSLFMRYHSHSPRPFSHEAVNAVSS-----------FHNMLSMRPAPPITQFNNILG 57
L I +L + H + PR ++ + V F MLS P I + +++
Sbjct: 128 LKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLIS 187
Query: 58 SLVRMNHYPTAVSLSQQLE-LKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQ 116
+ A S + ++ + PD+ T T+LI+C C LGR + S+ +L+ +Y
Sbjct: 188 VYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSI---VLEMSY- 243
Query: 117 PDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVG---E 173
V +VTY +I+ + G E
Sbjct: 244 -----------------------------------LGVGCSTVTYNTIIDGYGKAGMFEE 268
Query: 174 TGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLI 233
+ L + + + DV N+II S + + Y+ L + PD+ T+N LI
Sbjct: 269 MESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILI 328
Query: 234 YGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVE 293
F G +K + M+ T + +I K ++++ + V M V+
Sbjct: 329 LSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVK 388
Query: 294 PNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSL 353
PN Y +L++ Y + K + + V D +N +I+ + + L
Sbjct: 389 PNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKEL 448
Query: 354 FHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIA 398
+ M+ + KPD T++ +I+ + + L +M S+ I
Sbjct: 449 YIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDIG 493
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 2/158 (1%)
Query: 241 QLRKAVGFFNVMKMEN-IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIY 299
+ + A+ FN+++ ++ +P T L L ++ QA+ + M+ ++P + +Y
Sbjct: 123 RWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVY 182
Query: 300 NTLIDGYCLINQMTKA-RFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMD 358
+LI Y + KA L + + PDV T+ ++IS C D S+ M
Sbjct: 183 TSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMS 242
Query: 359 LKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
+ TY+ +I+G+ + ++LA+M +G
Sbjct: 243 YLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDG 280
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 12/288 (4%)
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
K + P A L+ LC +G I A F K K F V+ +V ++N C +
Sbjct: 217 KFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASK-KLFPVDVEGFNV----ILNGWCNI 271
Query: 172 G-ETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFT 228
+ A ++ R++ + Y+ +I + + D+ LY+EM + ++P +
Sbjct: 272 WTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEV 331
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
YN+L+Y +A+ + E +KPD T + +I LC+ K+ A +V+A MI
Sbjct: 332 YNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMI 391
Query: 289 KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMD 348
++ P V ++ ++ +N L M + P T+ +++ L +
Sbjct: 392 SENLSPTVDTFHAFLEA---VNFEKTLEVLGQ-MKISDLGPTEETFLLILGKLFKGKQPE 447
Query: 349 EAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
A+ ++ MD +I + Y I+G L+ A + +EM S G
Sbjct: 448 NALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKG 495
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 140/333 (42%), Gaps = 8/333 (2%)
Query: 37 FHNML-SMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFC 95
+N+L +M+P+ + +N + + + L ++ +GI PD AT T +I+C
Sbjct: 162 LNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCAR 221
Query: 96 HLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVD 155
G A K+ +PD + ++ G + A++ +D +A+ ++++D
Sbjct: 222 QNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYD--RARTEKWRID 279
Query: 156 RVSVTYRFLINELCEVGETGAALQLLRQIEE--EHTDVQMYNTIIKSMCEDKCVSDAYDL 213
+VT+ LI G L + +++ ++ +YN +I SM K A +
Sbjct: 280 --AVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKII 337
Query: 214 YNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCK 273
Y +++ +P+ TY L+ + A+ + MK + + V + L+
Sbjct: 338 YKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCAD 397
Query: 274 ERKVKQANSVVAAMIKA-SVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVH 332
R V +A + M + +P+ + +++LI Y ++++A M G P +
Sbjct: 398 NRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLF 457
Query: 333 TYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPD 365
+I + +D+ + F + I PD
Sbjct: 458 VLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 4/230 (1%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
+V +YN +K + K + + L++EML + I PD T+ T+I G ++AV +F
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
M +PD T +I A + V A S+ + ++TLI Y +
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 310 NQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
+ M GV P++ YN +I + + +A ++ + P+ TY
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
Query: 370 SILIEGWLNLPHYMHAINLLAEMCSNGIAYT----SKLDAICNDYNFDDE 415
+ L+ + + A+ + EM G++ T + L ++C D + DE
Sbjct: 354 AALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDE 403
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/351 (19%), Positives = 134/351 (38%), Gaps = 46/351 (13%)
Query: 24 RPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPD 83
+P + + ++ F L + A + NN+ N + L+ LE + +
Sbjct: 123 KPNEADVCDVITGFGGKLFEQDA--VVTLNNM------TNPETAPLVLNNLLETMKPSRE 174
Query: 84 IATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHD 143
+ + + F + + + ++L+R +PD TT++ NG + A+ + +
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234
Query: 144 DVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCE 203
+ + F + +VT +I+ G AL L
Sbjct: 235 KMSS----FGCEPDNVTMAAMIDAYGRAGNVDMALSL----------------------- 267
Query: 204 DKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVST 263
Y+ ++ D T++TLI + G + + MK +KP++
Sbjct: 268 ----------YDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVI 317
Query: 264 CDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMA 323
+ LI ++ + ++ QA + +I PN Y L+ Y A + M
Sbjct: 318 YNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMK 377
Query: 324 TRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYM-DLKDIKPDAETYSILI 373
+G++ V YN ++S + +DEA +F M + + PD+ T+S LI
Sbjct: 378 EKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLI 428
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 124/303 (40%), Gaps = 32/303 (10%)
Query: 83 DIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFH 142
D+ T ++ F ++YA K+ +R + D T ++ G C +G A +
Sbjct: 86 DVFVGTATVDMFVKCNSVDYA----AKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLF 141
Query: 143 DDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT-------DVQM-- 193
+++ ++ SVT LI ++ + + L+ +E H DVQ+
Sbjct: 142 REMRLN----EITPDSVTVMTLI-------QSASFEKSLKLLEAMHAVGIRLGVDVQVTV 190
Query: 194 YNTIIKSMCEDKCVS-DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
NT I + KC D+ L E + R V ++N++ + G+ A G + +M
Sbjct: 191 ANTWISTY--GKCGDLDSAKLVFEAI-DRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
Query: 253 KMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQM 312
E KPD+ST L + + Q + + I + ++ NT I Y
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 313 TKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSIL 372
AR L M +R ++ +MIS MDEA++LFH M KPD T L
Sbjct: 308 CSARLLFDIMTSRTCV----SWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSL 363
Query: 373 IEG 375
I G
Sbjct: 364 ISG 366
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 241 QLRKAVG---------FFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKAS 291
Q+R+AV F MK +P+ T + A + V V A +IK+
Sbjct: 23 QIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSP 82
Query: 292 VEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAM 351
+VF+ +D + N + A + M R D T+N M+S C S D+A
Sbjct: 83 FWSDVFVGTATVDMFVKCNSVDYAAKVFERMPER----DATTWNAMLSGFCQSGHTDKAF 138
Query: 352 SLFHYMDLKDIKPDAETYSILI-----EGWLNLPHYMHAINL 388
SLF M L +I PD+ T LI E L L MHA+ +
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGI 180
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 137/384 (35%), Gaps = 56/384 (14%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
N+V + P T +N +L + H A SL +++ L I PD T+ LI
Sbjct: 101 NSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLI 160
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+ ++ ++ T T + G++ SA + +
Sbjct: 161 QSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAID----- 215
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQL----------------------------LRQ 183
+ DR V++ + GE A L L Q
Sbjct: 216 -RGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQ 274
Query: 184 IEEEHT---------DVQMYNTIIK--SMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL 232
H+ D++ NT I S ED C A L++ M S ++ +
Sbjct: 275 GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTC--SARLLFDIM----TSRTCVSWTVM 328
Query: 233 IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVA-AMIKAS 291
I G+ G + +A+ F+ M KPD+ T LI K ++ + A A I
Sbjct: 329 ISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGC 388
Query: 292 VEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAM 351
NV I N LID Y + +AR + + V T+ MI+ + + EA+
Sbjct: 389 KRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVV----TWTTMIAGYALNGIFLEAL 444
Query: 352 SLFHYMDLKDIKPDAETYSILIEG 375
LF M D KP+ T+ +++
Sbjct: 445 KLFSKMIDLDYKPNHITFLAVLQA 468
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 147/393 (37%), Gaps = 81/393 (20%)
Query: 58 SLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQP 117
SL R S ++ L LK DI + I+ + GR N A ++ KR +
Sbjct: 39 SLKRATQTQIQKSQTKPL-LKCGDSDIKEWNVAISSYMRTGRCNEAL----RVFKRMPRW 93
Query: 118 DTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAA 177
+ + ++ G NGE A D++ +R V++ +I G A
Sbjct: 94 SSVSYNGMISGYLRNGEFELARKLFDEMP--------ERDLVSWNVMIKGYVRNRNLGKA 145
Query: 178 LQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLK----------------- 220
+L + E DV +NT++ ++ CV DA +++ M K
Sbjct: 146 RELFEIMPER--DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSK 203
Query: 221 ----------RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKP----------- 259
R + + ++N L+ GF ++ +A FF+ M + ++
Sbjct: 204 MEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQS 263
Query: 260 ----------------DVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLI 303
DV T ++ + R V++A + M E N +N ++
Sbjct: 264 GKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAML 319
Query: 304 DGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIK 363
GY +M A+ L M R V+ T+N MI+ + EA +LF M K
Sbjct: 320 AGYVQGERMEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEAKNLFDKMP----K 371
Query: 364 PDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
D +++ +I G+ H A+ L +M G
Sbjct: 372 RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/356 (19%), Positives = 147/356 (41%), Gaps = 63/356 (17%)
Query: 45 PAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFC---HLGRMN 101
P +N ++ +R + A L ++ + D+ + ++I + +LG+
Sbjct: 91 PRWSSVSYNGMISGYLRNGEFELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKAR 146
Query: 102 YAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTY 161
F ++ + D + T++ G NG + A + D + K V++
Sbjct: 147 ELFEIMP-------ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKN--------DVSW 191
Query: 162 RFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKR 221
L++ + + A L + E+ + +N ++ + K + +A ++ M ++
Sbjct: 192 NALLSAYVQNSKMEEACMLFKS--RENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR- 248
Query: 222 ISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQA- 280
DV ++NT+I G+ G++ +A F+ E+ DV T ++ + R V++A
Sbjct: 249 ---DVVSWNTIITGYAQSGKIDEARQLFD----ESPVQDVFTWTAMVSGYIQNRMVEEAR 301
Query: 281 --------------NSVVAAMIKAS----------VEP--NVFIYNTLIDGYCLINQMTK 314
N+++A ++ V P NV +NT+I GY ++++
Sbjct: 302 ELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISE 361
Query: 315 ARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYS 370
A+ L M R D ++ MI+ S EA+ LF M+ + + + ++S
Sbjct: 362 AKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFS 413
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 136/342 (39%), Gaps = 68/342 (19%)
Query: 65 YPTAVSLSQQLELKGIAP--DIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTAL 122
Y + EL + P +++T +I + G+++ A ++ K+ KR D +
Sbjct: 322 YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSW 377
Query: 123 TTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLR 182
++ G +G A+ ++ +G + S ++ +V AL+L +
Sbjct: 378 AAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSA----LSTCADV----VALELGK 429
Query: 183 QIEEE------HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGF 236
Q+ T + N ++ C+ + +A DL+ EM K D+ ++NT+I G+
Sbjct: 430 QLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGY 485
Query: 237 CAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNV 296
G A+ FF MK E +KPD +T +VA + S
Sbjct: 486 SRHGFGEVALRFFESMKREGLKPDDAT-------------------MVAVLSACS----- 521
Query: 297 FIYNTLIDGYCLINQMTKARFLSHTMATR-GVTPDVHTYNIMISWLCTSNMMDEAMSLFH 355
+ L+D K R +TM GV P+ Y M+ L + ++++A +L
Sbjct: 522 --HTGLVD---------KGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMK 570
Query: 356 YMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
M +PDA + L+ +H LAE ++ I
Sbjct: 571 NMPF---EPDAAIWGTLLG-----ASRVHGNTELAETAADKI 604
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 130/306 (42%), Gaps = 23/306 (7%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
++ I+ R N Y A+ +++ G+ PD T + +++ + G++ S+ + +
Sbjct: 224 YSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAV 283
Query: 112 KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEV 171
++PD A + L K G+ ++K+ + V V Y L+ +
Sbjct: 284 ATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNV----VVYNTLLEAMGRA 339
Query: 172 GETGAALQLLRQIEEEH--TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTY 229
G+ G A L ++ E + + ++K + + DA L+ EM K+ D Y
Sbjct: 340 GKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILY 399
Query: 230 NTLIYGFCAG-GQLRKAVGFFNVMKME-NIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
NTL+ CA G +A FN MK +PD + +++ K ++A + M
Sbjct: 400 NTLL-NMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEM 458
Query: 288 IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTM------ATRGVTPDVHTYNIMIS-- 339
+KA V+ NV + CL+ + KA+ + + RGV PD ++S
Sbjct: 459 LKAGVQVNV------MGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVM 512
Query: 340 WLCTSN 345
LC S+
Sbjct: 513 ALCESS 518
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 126/291 (43%), Gaps = 9/291 (3%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G+ D T + +I C N A ++ K PD + ++ +G++
Sbjct: 216 GVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEV 275
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIE--EEHTDVQMYNT 196
++ ++ A G++ ++ + L E G+ +L++++ + +V +YNT
Sbjct: 276 LSLYERAVATGWKPD----AIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN 256
++++M A L+NEML ++P+ T L+ + R A+ + MK +
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVE--PNVFIYNTLIDGYCLINQMTK 314
D + L++ +C + +++ + +K SV+ P+ F Y +++ Y + K
Sbjct: 392 WPMDFILYNTLLN-MCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEK 450
Query: 315 ARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPD 365
A L M GV +V ++ L + +D+ + +F + +KPD
Sbjct: 451 AMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 10/207 (4%)
Query: 175 GAALQLLRQIEEE------HTDVQMYNTIIKSMCEDKC--VSDAYDLYNEMLLKRISPDV 226
G QL+ ++ E D Y+TII C +C + A + + M + PD
Sbjct: 199 GRQFQLIEEMALEMVKDGVELDNITYSTII--TCAKRCNLYNKAIEWFERMYKTGLMPDE 256
Query: 227 FTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAA 286
TY+ ++ + G++ + + + KPD L + V+
Sbjct: 257 VTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQE 316
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNM 346
M V+PNV +YNTL++ + AR L + M G+TP+ T ++ +
Sbjct: 317 MKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARW 376
Query: 347 MDEAMSLFHYMDLKDIKPDAETYSILI 373
+A+ L+ M K D Y+ L+
Sbjct: 377 ARDALQLWEEMKAKKWPMDFILYNTLL 403
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 71/126 (56%)
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFF 249
D + N IIK+ + V +A ++ EM L P+ +TY+ L+ G C G++ + +GF+
Sbjct: 222 DTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFY 281
Query: 250 NVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLI 309
M+++ + P+ S LI +L ER++ +A VV M+ S+ P++ YNT++ C
Sbjct: 282 KEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRG 341
Query: 310 NQMTKA 315
+ ++A
Sbjct: 342 GRGSEA 347
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 78/177 (44%), Gaps = 37/177 (20%)
Query: 70 SLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGL 129
SL++Q++ G+ PD L ++I + ++ A V ++ +P+ + L+KG+
Sbjct: 209 SLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGV 268
Query: 130 CLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT 189
C G + + F+ +++ KG + N C
Sbjct: 269 CEKGRVGQGLGFYKEMQVKG-------------MVPNGSC-------------------- 295
Query: 190 DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAV 246
Y +I S+ ++ + +A ++ +ML +SPD+ TYNT++ C GG+ +A+
Sbjct: 296 ----YMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEAL 348
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 69/289 (23%)
Query: 163 FLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYN------- 215
+LI ELC+VG+ A +L + E DV + +I + + +A +L++
Sbjct: 51 WLIGELCKVGKIAEARKLFDGLPER--DVVTWTHVITGYIKLGDMREARELFDRVDSRKN 108
Query: 216 --------------------EMLLKRI-SPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKM 254
EML + + +V ++NT+I G+ G++ KA+ F+ M
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPE 168
Query: 255 ENI---------------------------KPDVSTCDPLIHALCKERKVKQANSVVAAM 287
NI + DV + ++ L K KV +A + M
Sbjct: 169 RNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 288 IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMM 347
E N+ +N +I GY N++ +A L M R D ++N MI+ + M
Sbjct: 229 ----PERNIISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREM 280
Query: 348 DEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
++A LF M K++ +++ +I G++ A+N+ ++M +G
Sbjct: 281 NKACGLFDRMPEKNVI----SWTTMITGYVENKENEEALNVFSKMLRDG 325
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 140/321 (43%), Gaps = 56/321 (17%)
Query: 83 DIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFH 142
++ + +I+ + GR++ A + ++ +R + + +++K L G I A+N
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNL- 193
Query: 143 DDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMC 202
F+ R V++ +++ L + G+ A +L + E ++ +N +I
Sbjct: 194 -------FERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER--NIISWNAMITGYA 244
Query: 203 EDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVS 262
++ + +A L+ M + D ++NT+I GF ++ KA G F+ M +N V
Sbjct: 245 QNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEKN----VI 296
Query: 263 TCDPLIHALCKERKVKQANSVVAAMIK-ASVEPNVFIYNT----------LIDGY----- 306
+ +I + ++ ++A +V + M++ SV+PNV Y + L++G
Sbjct: 297 SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQL 356
Query: 307 --------------CLINQMTKARFL--SHTMATRGVT--PDVHTYNIMISWLCTSNMMD 348
L+N +K+ L + M G+ D+ ++N MI+
Sbjct: 357 ISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGK 416
Query: 349 EAMSLFHYMDLKDIKPDAETY 369
EA+ +++ M KP A TY
Sbjct: 417 EAIEMYNQMRKHGFKPSAVTY 437
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 129/301 (42%), Gaps = 12/301 (3%)
Query: 82 PDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINF 141
P + + +I+ + G + A+ + + ++ P ++ L+ L G+ R A +
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 142 HDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTD-----VQMYNT 196
K + +V Y LI + E G+ A ++ ++ HT +Q YNT
Sbjct: 762 SRTCLEKNIELD----TVGYNTLIKAMLEAGKLQCASEIYERM---HTSGVPCSIQTYNT 814
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN 256
+I + A ++++ + D Y +I + GG++ +A+ F+ M+ +
Sbjct: 815 MISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKG 874
Query: 257 IKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKAR 316
IKP + + ++ R + + ++ AM + ++ Y TLI Y +Q +A
Sbjct: 875 IKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAE 934
Query: 317 FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
+ +G+ ++ ++S L + MM+EA + M I PD+ +++G+
Sbjct: 935 KTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGY 994
Query: 377 L 377
+
Sbjct: 995 M 995
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 133/318 (41%), Gaps = 13/318 (4%)
Query: 83 DIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFH 142
D+ L +++N G +N ++L + K ++A+ ++ G++ A
Sbjct: 601 DVMALGLMLNLRLKEGNLNETKAILNLMFKTDL--GSSAVNRVISSFVREGDVSKAEMIA 658
Query: 143 DDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMC 202
D + G + + + ++ LI + A +L E T + ++I+SM
Sbjct: 659 DIIIRLGLRMEEETIAT----LIAVYGRQHKLKEAKRLYLAAGESKTPGK---SVIRSMI 711
Query: 203 ED--KC--VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIK 258
+ +C + DAY L+ E K P T + L+ G+ R+A +NI+
Sbjct: 712 DAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIE 771
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFL 318
D + LI A+ + K++ A+ + M + V ++ YNT+I Y Q+ KA +
Sbjct: 772 LDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEI 831
Query: 319 SHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLN 378
G+ D Y MI M EA+SLF M K IKP +Y+++++
Sbjct: 832 FSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICAT 891
Query: 379 LPHYMHAINLLAEMCSNG 396
+ LL M NG
Sbjct: 892 SRLHHEVDELLQAMERNG 909
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 131/354 (37%), Gaps = 56/354 (15%)
Query: 53 NNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILK 112
N ++ S VR A ++ + G+ + T+ LI + ++ A K
Sbjct: 639 NRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEA--------K 690
Query: 113 RAY-------QPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
R Y P + + +++ G + A + KG D +VT L+
Sbjct: 691 RLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKG----CDPGAVTISILV 746
Query: 166 NELCEVGETGAALQLLRQIEEEHTDVQM--YNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
N L G+ A + R E++ ++ YNT+IK+M E + A ++Y M +
Sbjct: 747 NALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVP 806
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
+ TYNT+I + G QL KA+ F+ + + D
Sbjct: 807 CSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEK--------------------- 845
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
IY +I Y +M++A L M +G+ P +YN+M+ T
Sbjct: 846 --------------IYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICAT 891
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
S + E L M+ D TY LI+ + + A + + GI
Sbjct: 892 SRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGI 945
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/345 (18%), Positives = 135/345 (39%), Gaps = 9/345 (2%)
Query: 82 PDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINF 141
P + TI++ + +G++ A ++L+ +PD A T++ G + + F
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 142 HDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQ--MYNTIIK 199
+ V+ + Y F+++ L + G + L ++ EE Y ++
Sbjct: 246 YKAVQERRILLSTS----VYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVS 301
Query: 200 SMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKP 259
S + +A + EM P+ TY+++I G KA+G + M+ + I P
Sbjct: 302 SYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVP 361
Query: 260 DVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLS 319
TC ++ K +A S+ A M + + + I +I Y + A+ +
Sbjct: 362 SNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMF 421
Query: 320 HTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNL 379
+ D TY M S + +A+ + M +DI Y ++++ + +
Sbjct: 422 EETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKI 481
Query: 380 PHYMHAINLLAEMCSNGIAYTSKLDAICNDY---NFDDEIEKFMR 421
+ A + G+ S + + N Y N ++ + F++
Sbjct: 482 QNVDCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIK 526
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 129/292 (44%), Gaps = 17/292 (5%)
Query: 78 KGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRS 137
+G+ T L++ + G + A V +L R D L+ LNG I
Sbjct: 171 QGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDR----DLVLWNALVSSYVLNGMIDE 226
Query: 138 AINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTI 197
A + + +F+ D T+ L++ C + E G + + D+ + +
Sbjct: 227 AFGLLKLMGSDKNRFRGDYF--TFSSLLSA-CRI-EQGKQIHAILFKVSYQFDIPVATAL 282
Query: 198 IKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENI 257
+ + +SDA + + M+++ +V ++N +I GF G+ R+A+ F M +EN+
Sbjct: 283 LNMYAKSNHLSDARECFESMVVR----NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENL 338
Query: 258 KPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARF 317
+PD T ++ + K + + V A + K + + N+LI Y +++A
Sbjct: 339 QPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALL 398
Query: 318 LSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
H++ PD+ ++ +I L + +E++ +F M L+ ++PD T+
Sbjct: 399 CFHSIR----EPDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITF 445
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 216 EMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN--IKPDVSTCDPLIHALCK 273
E +L R D+ +N L+ + G + +A G +M + + D T L+ A
Sbjct: 201 EAVLDR---DLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC-- 255
Query: 274 ERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHT 333
+++Q + A + K S + ++ + L++ Y N ++ AR +M R V +
Sbjct: 256 --RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVV----S 309
Query: 334 YNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
+N MI + EAM LF M L++++PD T++ ++
Sbjct: 310 WNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVL 349
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 131/317 (41%), Gaps = 59/317 (18%)
Query: 27 SHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLEL-KGIAPDIA 85
+ E V+A F M P P + + +L + + + Y A+ L + KG+ PD +
Sbjct: 211 NREPVDARRVFDEM----PEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGS 266
Query: 86 TLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTL--MKGLCLNGEIRSAINFHD 143
T ++ +L R+ + GK++ + ++L M G C G +R A +
Sbjct: 267 TFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKC--GSVREARQVFN 324
Query: 144 DVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMC- 202
+ K SV++ L+ C+ GE A+++ R++EE+ D+ + T++K+
Sbjct: 325 GMSKKN--------SVSWSALLGGYCQNGEHEKAIEIFREMEEK--DLYCFGTVLKACAG 374
Query: 203 ----------------------------------EDKCVSDAYDLYNEMLLKRISPDVFT 228
+ C+ A +Y++M ++ ++ T
Sbjct: 375 LAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR----NMIT 430
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
+N ++ G+ +AV FFN M + IKPD + ++ A V + + M
Sbjct: 431 WNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMA 490
Query: 289 KA-SVEPNVFIYNTLID 304
K+ ++P Y+ +ID
Sbjct: 491 KSYGIKPGTEHYSCMID 507
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM-KMENIKPDVSTCDPL 267
DA +++EM PDV + ++ F +A+G F M + + + PD ST +
Sbjct: 216 DARRVFDEM----PEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTV 271
Query: 268 IHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGV 327
+ A R++KQ + +I + NV + ++L+D Y + +AR + + M+ +
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331
Query: 328 TPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDI 362
+++ ++ C + ++A+ +F M+ KD+
Sbjct: 332 V----SWSALLGGYCQNGEHEKAIEIFREMEEKDL 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 21/197 (10%)
Query: 178 LQLLRQIEEEH----TDVQMYNTIIKSMCED---KC--VSDAYDLYNEMLLKRISPDVFT 228
L+ L+Q +E H T+ N +++S D KC V +A ++N M K + +
Sbjct: 278 LRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK----NSVS 333
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMI 288
++ L+ G+C G+ KA+ F M+ + D+ ++ A V+ + +
Sbjct: 334 WSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYV 389
Query: 289 KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMD 348
+ NV + + LID Y + A + M+ R ++ T+N M+S L + +
Sbjct: 390 RRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR----NMITWNAMLSALAQNGRGE 445
Query: 349 EAMSLFHYMDLKDIKPD 365
EA+S F+ M K IKPD
Sbjct: 446 EAVSFFNDMVKKGIKPD 462
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 12/200 (6%)
Query: 205 KCVSDAYD-LYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVST 263
K V+D ++ + N+ LKR D + ++ C G A E I PD +
Sbjct: 192 KQVTDFFEKMENDYGLKR---DKESLTLVVKKLCEKGHASIAEKMVKNTANE-IFPDENI 247
Query: 264 CDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHT-- 321
CD LI C K+ +A + M + E YN ++D C + + L
Sbjct: 248 CDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVE 307
Query: 322 -----MATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGW 376
M RGV + T+N++I+ LC +EAM+LF M +PDAETY +LI
Sbjct: 308 KVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSL 367
Query: 377 LNLPHYMHAINLLAEMCSNG 396
++ +M S G
Sbjct: 368 YQAARIGEGDEMIDKMKSAG 387
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/321 (19%), Positives = 125/321 (38%), Gaps = 31/321 (9%)
Query: 37 FHNMLSMRPAPPITQFNNILGS---------LVRMNHYPTAVSLSQQLELK-GIAPDIAT 86
F ML + I+++ I G LVR +++E G+ D +
Sbjct: 159 FKGMLEI-----ISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKES 213
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
LT+++ C G + A ++ + PD L+ G C+ ++ A ++
Sbjct: 214 LTLVVKKLCEKGHASIAEKMVKNTANEIF-PDENICDLLISGWCIAEKLDEATRLAGEMS 272
Query: 147 AKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE---------HTDVQMYNTI 197
GF+ Y +++ +C++ +L ++E+ + + +N +
Sbjct: 273 RGGFEIGTK----AYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVL 328
Query: 198 IKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENI 257
I ++C+ + +A L+ M PD TY LI ++ + + MK
Sbjct: 329 INNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGY 388
Query: 258 KPDVSTCD--PLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA 315
++ + + LC +++ A SV +M +P + Y+ L+ C NQ+T+A
Sbjct: 389 GELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRA 448
Query: 316 RFLSHTMATRGVTPDVHTYNI 336
L A +G+ Y +
Sbjct: 449 NGLYKEAAKKGIAVSPKEYRV 469
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 131/330 (39%), Gaps = 44/330 (13%)
Query: 122 LTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLL 181
L + + L G + +F + ++ + + D+ S+T ++ +LCE G A +++
Sbjct: 178 LESAIDRLVRAGRPKQVTDFFEKME-NDYGLKRDKESLT--LVVKKLCEKGHASIAEKMV 234
Query: 182 RQIEEE-HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGG 240
+ E D + + +I C + + +A L EM YN ++ C
Sbjct: 235 KNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVC--- 291
Query: 241 QLRKAVGFFNV----------MKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKA 290
+L + F + M+ + + T + LI+ LCK R+ ++A ++ M +
Sbjct: 292 KLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEW 351
Query: 291 SVEPNVFIYNTLI----------DGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISW 340
+P+ Y LI +G +I++M A + G + Y +
Sbjct: 352 GCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGY--------GELLNKKEYYGFLKI 403
Query: 341 LCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGIAYT 400
LC ++ AMS+F M KP +TY +L+ A L E GIA +
Sbjct: 404 LCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVS 463
Query: 401 SKLDAICNDYNFDDEIEKFMRYKETGGDAD 430
K +Y D +FM+ K D++
Sbjct: 464 PK------EYRVDP---RFMKKKTKEVDSN 484
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 139/343 (40%), Gaps = 46/343 (13%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G+ D+ + LI+ + G + A V ++ +R + ++ G NG
Sbjct: 76 GVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER----NVATWNAMIGGYMSNG----- 126
Query: 139 INFHDDVKAKGF--QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNT 196
D V A G + V R +VT+ +I + E A +L ++ E +V+ ++
Sbjct: 127 ----DAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSV 182
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLK-------------RI--------------SPDVFTY 229
++ ++ + DA + ++ K RI + D+ +
Sbjct: 183 MLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIW 242
Query: 230 NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIK 289
NTLI G+ G A+ F M+ E +PD T ++ A + ++ V + +
Sbjct: 243 NTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINH 302
Query: 290 ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
+E N F+ N LID Y + A + +++ R V N MIS L E
Sbjct: 303 RGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVA----CCNSMISCLAIHGKGKE 358
Query: 350 AMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
A+ +F M+ D+KPD T+ ++ ++ M + + +EM
Sbjct: 359 ALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM 401
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 109/260 (41%), Gaps = 11/260 (4%)
Query: 81 APDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAIN 140
A D+ LI + G + A + Y+PD +++++ +G +
Sbjct: 236 ARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE 295
Query: 141 FHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKS 200
H + +G + LI+ + G+ A + I V N++I
Sbjct: 296 VHSLINHRGIELN----QFVSNALIDMYAKCGDLENATSVFESISVR--SVACCNSMISC 349
Query: 201 MCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPD 260
+ +A ++++ M + PD T+ ++ GG L + + F+ MK +++KP+
Sbjct: 350 LAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPN 409
Query: 261 VSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTK-ARFLS 319
V LIH L + K+K+A +V M V+PN + L+ G C ++ T+ A +
Sbjct: 410 VKHFGCLIHLLGRSGKLKEAYRLVKEM---HVKPNDTVLGALL-GACKVHMDTEMAEQVM 465
Query: 320 HTMATRGVTPDVHTYNIMIS 339
+ T G + ++ N + S
Sbjct: 466 KIIETAGSITNSYSENHLAS 485
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/423 (21%), Positives = 171/423 (40%), Gaps = 46/423 (10%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
A+ FH MR IT +N++L + ++ P+ + + QL + PD + I++
Sbjct: 79 GALRVFH---GMRAKNTIT-WNSLL---IGISKDPSRMMEAHQLFDEIPEPDTFSYNIML 131
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
+C+ N F R D + T++ G GE+ A F
Sbjct: 132 SCYVR----NVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKAREL--------FY 179
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAY 211
+++ V++ +I+ E G+ A + V + +I + K V A
Sbjct: 180 SMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVR--GVVAWTAMITGYMKAKKVELAE 237
Query: 212 DLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHAL 271
++ +M ++ ++ T+N +I G+ + + F M E I+P+ S +
Sbjct: 238 AMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLG- 293
Query: 272 CKERKVKQANSVVAAMI-KASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPD 330
C E Q + ++ K+++ +V +LI YC ++ A L M + D
Sbjct: 294 CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK----D 349
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
V +N MIS D+A+ LF M I+PD W+ + A N A
Sbjct: 350 VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPD----------WITFVAVLLACN-HA 398
Query: 391 EMCSNGIAYTSKLDAICNDYNFDDEIEKFMRYKETGGDADFLIASHIVLRNPSFK--ATG 448
+ + G+AY +++ DY + + + + + G A L + ++R+ F+ A
Sbjct: 399 GLVNIGMAY---FESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAV 455
Query: 449 FGT 451
FGT
Sbjct: 456 FGT 458
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 105/236 (44%), Gaps = 17/236 (7%)
Query: 80 IAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAI 139
+ ++ T +I+ + R + +L+ +P+++ L++ + G ++
Sbjct: 245 VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGR 304
Query: 140 NFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIK 199
H V V ++ LI+ C+ GE G A +L ++++ DV +N +I
Sbjct: 305 QIHQIVSKSTLCNDVTALTS----LISMYCKCGELGDAWKLFEVMKKK--DVVAWNAMIS 358
Query: 200 SMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM----KME 255
+ A L+ EM+ +I PD T+ ++ G + + +F M K+E
Sbjct: 359 GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418
Query: 256 NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQ 311
+PD TC ++ L + K+++A ++ +M P+ ++ TL+ G C +++
Sbjct: 419 P-QPDHYTC--MVDLLGRAGKLEEALKLIRSM---PFRPHAAVFGTLL-GACRVHK 467
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 134/323 (41%), Gaps = 20/323 (6%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + +N + V +H ++ L ++ ++P T + L+ R + S+
Sbjct: 834 PNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASR--FGESL 891
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
I K + TTL+ G IR A D++ +R + + +++
Sbjct: 892 QAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMP--------ERDDIAWTTMVS 943
Query: 167 ELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
V + +A L Q+ E++ N +I + A L+N+M +K D+
Sbjct: 944 AYRRVLDMDSANSLANQMSEKNEATS--NCLINGYMGLGNLEQAESLFNQMPVK----DI 997
Query: 227 FTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAA 286
++ T+I G+ + R+A+ F M E I PD T +I A ++ V
Sbjct: 998 ISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMY 1057
Query: 287 MIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNM 346
++ +V+I + L+D Y + +A + + + ++ +N +I L
Sbjct: 1058 TLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK----NLFCWNSIIEGLAAHGF 1113
Query: 347 MDEAMSLFHYMDLKDIKPDAETY 369
EA+ +F M+++ +KP+A T+
Sbjct: 1114 AQEALKMFAKMEMESVKPNAVTF 1136
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 105/240 (43%), Gaps = 5/240 (2%)
Query: 49 ITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLG 108
+ +N+++ ++ + TAV L ++L+ +G+ PD AT LI+ F LG++ AF
Sbjct: 298 LISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFE 357
Query: 109 KILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINEL 168
++L P LT+L+ +++ H V + +R LI+
Sbjct: 358 RMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHV----IKAAAERDIFVLTSLIDMY 413
Query: 169 CEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFT 228
+ G + A ++ + E + D +N +I + A +++ + +++ P + T
Sbjct: 414 MKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLAT 473
Query: 229 YNTLIYGFCAGGQLRKAVGFFNVMKME-NIKPDVSTCDPLIHALCKERKVKQANSVVAAM 287
+ ++ G + K F +M+ E KP +I L + ++++A V+ M
Sbjct: 474 FTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 2/180 (1%)
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
+N++I M + A +L+ ++ + + PD T+N+LI GF G++ +A FF M
Sbjct: 301 WNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML 360
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
+ P + L+ A +K + +IKA+ E ++F+ +LID Y +
Sbjct: 361 SVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSS 420
Query: 314 KARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
AR + + P +N+MIS + A+ +F + + ++P T++ ++
Sbjct: 421 WARRIFDRFEPKPKDPVF--WNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVL 478
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%)
Query: 219 LKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVK 278
+K D FTY T++ F G+++ F++MK + + D T LIH + V
Sbjct: 115 IKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVD 174
Query: 279 QANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMI 338
A + M EP V Y + ++ +A + M V+P+ HTY +++
Sbjct: 175 GAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLM 234
Query: 339 SWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNGI 397
+L + +EA+ +F M ++PD +ILI L +L M NG+
Sbjct: 235 EYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV 293
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%)
Query: 194 YNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
Y T++ E + Y +++ M K + D TY +LI+ + G + A+ + M+
Sbjct: 125 YTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMR 184
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
+P V + + L + +V++A V M+++ V PN Y L++ +
Sbjct: 185 DNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCE 244
Query: 314 KARFLSHTMATRGVTPDVHTYNIMIS 339
+A + M GV PD NI+I+
Sbjct: 245 EALDIFFKMQEIGVQPDKAACNILIA 270
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 100 MNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSV 159
M+YA V KI K + TL++G G SA + + +++ G V+ +
Sbjct: 69 MSYAHKVFSKIEKPI---NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGL---VEPDTH 122
Query: 160 TYRFLINEL-----CEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLY 214
TY FLI + +GET ++ ++R VQ + + C D V+ AY ++
Sbjct: 123 TYPFLIKAVTTMADVRLGETIHSV-VIRSGFGSLIYVQNSLLHLYANCGD--VASAYKVF 179
Query: 215 NEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKE 274
++M K D+ +N++I GF G+ +A+ + M + IKPD T L+ A K
Sbjct: 180 DKMPEK----DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKI 235
Query: 275 RKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY 334
+ V MIK + N+ N L+D Y ++ +A+ L M + ++
Sbjct: 236 GALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV----SW 291
Query: 335 NIMISWLCTSNMMDEAMSLFHYMD 358
+I L + EA+ LF YM+
Sbjct: 292 TSLIVGLAVNGFGKEAIELFKYME 315
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN-IKPDVSTCDPLIHALCKERKVKQANSV 283
+VF +NTLI G+ G A + M++ ++PD T LI A+ V+ ++
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
+ +I++ +++ N+L+ Y + A + M + D+ +N +I+
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK----DLVAWNSVINGFAE 199
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAET 368
+ +EA++L+ M+ K IKPD T
Sbjct: 200 NGKPEEALALYTEMNSKGIKPDGFT 224
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 218 LLKRISP--DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKER 275
+ +R+SP +V+ +N++I F G +A+ F+ ++ + PD T +I A
Sbjct: 61 VFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120
Query: 276 KVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYN 335
+ + V ++ E ++F+ N L+D Y + +T+AR + M R D+ ++N
Sbjct: 121 DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR----DLVSWN 176
Query: 336 IMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNL 379
+IS + +EA+ ++H + I PD+ T S ++ + NL
Sbjct: 177 SLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNL 220
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 138/343 (40%), Gaps = 63/343 (18%)
Query: 80 IAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAI 139
++P++ + T LI G + F +L +++KR +P+ L+ +++ +R +
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVL 447
Query: 140 NFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMY--NTI 197
H LLR+ H D +M N++
Sbjct: 448 EIH-----------------------------------AYLLRR----HVDGEMVVGNSL 468
Query: 198 IKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENI 257
+ + + V A+++ M KR D TY +L+ F G+ A+ N M + I
Sbjct: 469 VDAYASSRKVDYAWNVIRSM--KR--RDNITYTSLVTRFNELGKHEMALSVINYMYGDGI 524
Query: 258 KPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARF 317
+ D + I A ++ + +K+ + N+L+D Y + A+
Sbjct: 525 RMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKK 584
Query: 318 LSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWL 377
+ +AT PDV ++N ++S L ++ + A+S F M +K+ +PD+ T+ IL+
Sbjct: 585 VFEEIAT----PDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACS 640
Query: 378 NLPHYMHAINLLAEMCSNGIAYTSKLDAICNDYNFDDEIEKFM 420
N + G+ Y + I YN + ++E ++
Sbjct: 641 N-----------GRLTDLGLEYFQVMKKI---YNIEPQVEHYV 669
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 16/225 (7%)
Query: 83 DIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFH 142
D T T L+ F LG+ A SV+ + + D +L + G + + + H
Sbjct: 492 DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLH 551
Query: 143 DDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKS 200
GF ++N L ++ +L+ +++ EE DV +N ++
Sbjct: 552 CYSVKSGFSGAAS--------VLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSG 603
Query: 201 MCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRK-AVGFFNVMK-MENIK 258
+ + +S A + EM +K PD T+ L+ C+ G+L + +F VMK + NI+
Sbjct: 604 LASNGFISSALSAFEEMRMKETEPDSVTFLILLSA-CSNGRLTDLGLEYFQVMKKIYNIE 662
Query: 259 PDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLI 303
P V L+ L + ++++A VV M ++PN I+ TL+
Sbjct: 663 PQVEHYVHLVGILGRAGRLEEATGVVETM---HLKPNAMIFKTLL 704
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 137/317 (43%), Gaps = 39/317 (12%)
Query: 77 LKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIR 136
++GI ++ T L++ + +M A ++L + + D T+++ G N +
Sbjct: 252 VRGIPLNVVLKTSLVDFYSQFSKMEDAV----RVLNSSGEQDVFLWTSVVSGFVRNLRAK 307
Query: 137 SAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIE--------EEH 188
A+ ++++ G Q + TY +++ LC + L +QI E+
Sbjct: 308 EAVGTFLEMRSLGLQPN----NFTYSAILS-LCSAVRS---LDFGKQIHSQTIKVGFEDS 359
Query: 189 TDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGF 248
TDV + C V +A ++ M +SP+V ++ TLI G G ++ G
Sbjct: 360 TDVGNALVDMYMKCSASEV-EASRVFGAM----VSPNVVSWTTLILGLVDHGFVQDCFGL 414
Query: 249 FNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCL 308
M ++P+V T ++ A K R V++ + A +++ V+ + + N+L+D Y
Sbjct: 415 LMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYAS 474
Query: 309 INQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAET 368
++ A + +M R D TY +++ + A+S+ +YM I+ D
Sbjct: 475 SRKVDYAWNVIRSMKRR----DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQ-- 528
Query: 369 YSILIEGWLNLPHYMHA 385
L+LP ++ A
Sbjct: 529 --------LSLPGFISA 537
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/370 (17%), Positives = 150/370 (40%), Gaps = 47/370 (12%)
Query: 55 ILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRA 114
++ + + + +A+SL +++ G P+ T + ++ L ++Y V G ++K
Sbjct: 95 MISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTG 154
Query: 115 YQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGET 174
++ ++ ++L G+ + A ++ + ++++ +I+ L +
Sbjct: 155 FEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ--------NADTISWTMMISSLVGARKW 206
Query: 175 GAALQLLRQIEE------EHTDVQMY----------------NTIIKSM----CEDKCVS 208
ALQ ++ + E T V++ N I++ + +
Sbjct: 207 REALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLV 266
Query: 209 DAYDLYNEM------LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVS 262
D Y +++M L DVF + +++ GF + ++AVG F M+ ++P+
Sbjct: 267 DFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNF 326
Query: 263 TCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGY--CLINQMTKARFLSH 320
T ++ R + + + IK E + + N L+D Y C +++ +R
Sbjct: 327 TYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGA 386
Query: 321 TMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLP 380
V+P+V ++ +I L + + L M ++++P+ T S ++ L
Sbjct: 387 M-----VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLR 441
Query: 381 HYMHAINLLA 390
H + + A
Sbjct: 442 HVRRVLEIHA 451
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 129/323 (39%), Gaps = 36/323 (11%)
Query: 83 DIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFH 142
D+ + LIN + +G A V + +PD + L+ + G++ F+
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 143 DDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMC 202
+ VK G + + V+ L++ + G+ A ++ +E+ + + T+I
Sbjct: 281 EYVKENGLRMTIPLVNA----LMDMFSKCGDIHEARRIFDNLEKR--TIVSWTTMISGYA 334
Query: 203 EDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVS 262
+ + L+++M K DV +N +I G + + A+ F M+ N KPD
Sbjct: 335 RCGLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEI 390
Query: 263 TCDPLIHAL--CKERKVKQANSVVAAMI-KASVEPNVFIYNTLIDGYCLINQMTKARFLS 319
T +IH L C + + I K S+ NV + +L+D Y +++A +
Sbjct: 391 T---MIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVF 447
Query: 320 HTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNL 379
H + TR TY +I L A+S F+ M I PD T+
Sbjct: 448 HGIQTRNSL----TYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITF---------- 493
Query: 380 PHYMHAINLLAEMCSNGIAYTSK 402
I LL+ C G+ T +
Sbjct: 494 ------IGLLSACCHGGMIQTGR 510
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 108/247 (43%), Gaps = 4/247 (1%)
Query: 160 TYRFLINELCEVGETGAALQLLRQIEEEHTD--VQMYNTIIKSMCEDKCVSDAYDLYNEM 217
TY L+ L + G+ A +L ++ EE + V++Y ++ + + DA+ + ++M
Sbjct: 126 TYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKM 185
Query: 218 L-LKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERK 276
+ PDVFTY+TL+ Q + M I P+ T + ++ + +
Sbjct: 186 KSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGR 245
Query: 277 VKQANSVVAAM-IKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYN 335
Q V++ M + + +P+V+ N ++ + + ++ G+ P+ T+N
Sbjct: 246 FDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFN 305
Query: 336 IMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSN 395
I+I M D+ S+ YM + TY+ +IE + ++ + +M S
Sbjct: 306 ILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSE 365
Query: 396 GIAYTSK 402
G+ +K
Sbjct: 366 GMKADTK 372
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 2/169 (1%)
Query: 226 VFTYNTLIYGFCAGGQLRKAVGFFNVMKMENI-KPDVSTCDPLIHALCKERKVKQANSVV 284
V T + A Q +A+ F++++ + +P T L+ L K + +A +
Sbjct: 88 VNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLF 147
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKA-RFLSHTMATRGVTPDVHTYNIMISWLCT 343
M++ +EP V +Y L+ Y N + A L + PDV TY+ ++
Sbjct: 148 DEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVD 207
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
++ D SL+ MD + I P+ T +I++ G+ + + +L++M
Sbjct: 208 ASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDM 256
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 129/334 (38%), Gaps = 52/334 (15%)
Query: 51 QFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKI 110
+FN +L L + L L + A D T +I+ +G+ A + KI
Sbjct: 105 EFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIF-KI 163
Query: 111 LKRAYQP-DTTALTTLMKGLCLNGEIRSAINF---HDDVKAKGFQFQVDRVSVTYRFLIN 166
L + P D +T ++ LC G ++ A+ H DV + N
Sbjct: 164 LDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISG-----------------N 206
Query: 167 ELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDV 226
EL +Y +++ + V +A + +M I+PD+
Sbjct: 207 EL-----------------------SVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDL 243
Query: 227 FTYNTLIYGFCA-------GGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQ 279
F +N+L+ C G + +A+ M+ I+P + + L+ L + R+V++
Sbjct: 244 FCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRE 303
Query: 280 ANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMIS 339
+ ++ M ++ +P+ Y ++ L + K + M RG P+ Y +I
Sbjct: 304 SCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIG 363
Query: 340 WLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
LC ++ A+ LF M + + Y +LI
Sbjct: 364 VLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLI 397
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 122/284 (42%), Gaps = 18/284 (6%)
Query: 161 YRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEML 218
+ +++ L E + A LL + +E+ D Q ++ + +++ + DA ++ ++L
Sbjct: 106 FNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIF-KIL 164
Query: 219 LKRISP-DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKV 277
K P D FT +I C+ G +++A+G + K ++S L+ +R V
Sbjct: 165 DKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNV 224
Query: 278 KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQ-------MTKARFLSHTMATRGVTPD 330
K+A V+ M A + P++F +N+L+ C N + +A + M + + P
Sbjct: 225 KEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPT 284
Query: 331 VHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLA 390
+YNI++S L + + E+ + M PD +Y ++ + ++
Sbjct: 285 SMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVD 344
Query: 391 EMCSNGIA-----YTSKLDAICN--DYNFDDEIEKFMRYKETGG 427
EM G Y + +C NF ++ + M+ GG
Sbjct: 345 EMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGG 388
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 11/197 (5%)
Query: 214 YNEMLLKRISPDVFTY-----NTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLI 268
Y LLK IS Y N +I+ F Q+ K + MK KPDV T + ++
Sbjct: 160 YLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVL 219
Query: 269 HALCKERKVKQANSVVAAMIK-ASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGV 327
L + V + V++ M + SV N+ YNT+++G + + + M G+
Sbjct: 220 DILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGI 279
Query: 328 TPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAIN 387
PD+ +Y +I L S + E++ LF M + I+P Y LI+ + A+
Sbjct: 280 EPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQ 339
Query: 388 LLAEMCSNGIAYTSKLD 404
L S+ + TS LD
Sbjct: 340 L-----SDELKNTSSLD 351
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 107/269 (39%), Gaps = 44/269 (16%)
Query: 52 FNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKIL 111
+ N++ R + A L Q L+ K I I+ L+ L M + V ++L
Sbjct: 73 YTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFREVL 132
Query: 112 ----------------KRAY--QPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQ 153
RA+ D T LT+L+K + + I + + A Q
Sbjct: 133 ILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQ 192
Query: 154 VDRV---------------SVTYRFLINELCEVGETGAALQLLRQIEEE---HTDVQMYN 195
+D+V +TY +++ L G L +L ++E+ ++ YN
Sbjct: 193 IDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYN 252
Query: 196 TIIKSM---CE-DKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNV 251
T++ M C D C+ +YNEM+ I PD+ +Y +I G +++++ F+
Sbjct: 253 TVLNGMRKACRFDMCLV----IYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDE 308
Query: 252 MKMENIKPDVSTCDPLIHALCKERKVKQA 280
MK I+P V LI L K + A
Sbjct: 309 MKQRQIRPSVYVYRALIDCLKKSGDFQSA 337
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
Query: 248 FFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC 307
N MK+ PD TC+ L+ +LC K+ +A VV M A P+V Y +I+ C
Sbjct: 158 IINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDVESYGAVINSLC 217
Query: 308 LINQMTKARFLSHTMATR-GVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDA 366
L + T + M ++ G++P + + L + + +A+ + +++ +D +
Sbjct: 218 LARKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIEFVESRDYPVEF 277
Query: 367 ETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
E+Y +++EG L + Y+ A ++ M G
Sbjct: 278 ESYEVVVEGCLEVREYILAGKVVMRMTDRG 307
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/352 (18%), Positives = 142/352 (40%), Gaps = 39/352 (11%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + + ++ L + A L Q++ +G + T L++ + GR + AF++
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 107 LGKILKRAY--QPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFL 164
L + +K ++ QPD + L+K + D++ +G + ++TY L
Sbjct: 208 LER-MKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPN----TITYNTL 262
Query: 165 INELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISP 224
I+ G A V+M +T+I+ + ED C P
Sbjct: 263 IDAY------GKAKMF----------VEMESTLIQMLGEDDC----------------KP 290
Query: 225 DVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV 284
D +T N+ + F GQ+ + + I+P++ T + L+ + K K+ ++V+
Sbjct: 291 DSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVM 350
Query: 285 AAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTS 344
M K + YN +ID + + + +L M + + P T ++ +
Sbjct: 351 EYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRA 410
Query: 345 NMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEMCSNG 396
+ D+ + +++ DI+ D ++ L++ + + + +L M G
Sbjct: 411 SKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKG 462
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/301 (17%), Positives = 117/301 (38%), Gaps = 38/301 (12%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P + ++ ++ S +++ + L + +GI P+ T LI+ + S
Sbjct: 219 PDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMEST 278
Query: 107 LGKIL-KRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
L ++L + +PD+ + + ++ NG+I N ++ ++ G + + T+ L+
Sbjct: 279 LIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIR----TFNILL 334
Query: 166 NELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPD 225
+ + G ++ +++ H S
Sbjct: 335 DSYGKSGNYKKMSAVMEYMQKYH---------------------------------YSWT 361
Query: 226 VFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVA 285
+ TYN +I F G L++ F +M+ E I P T L+ A + K + V+
Sbjct: 362 IVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLR 421
Query: 286 AMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSN 345
+ + + ++ +N L+D Y + + + + + M +G PD TY M+ S
Sbjct: 422 FIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISG 481
Query: 346 M 346
M
Sbjct: 482 M 482
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 2/207 (0%)
Query: 178 LQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFC 237
+LLR+ +V +Y +I + + K A++L+ EM+ + + Y L+ +
Sbjct: 137 FELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYS 196
Query: 238 AGGQLRKAVGFFNVMKME-NIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNV 296
G+ A MK N +PDV T LI + + + +++ M + + PN
Sbjct: 197 RSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNT 256
Query: 297 FIYNTLIDGYCLINQMTKAR-FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFH 355
YNTLID Y + L + PD T N + + ++ + +
Sbjct: 257 ITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYE 316
Query: 356 YMDLKDIKPDAETYSILIEGWLNLPHY 382
I+P+ T++IL++ + +Y
Sbjct: 317 KFQSSGIEPNIRTFNILLDSYGKSGNY 343
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 9/258 (3%)
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIE--EEHTDVQMYNTIIKSMCEDKCVS 208
+F V +V Y +I + G+ A L+++++ + DV Y ++I C +
Sbjct: 158 EFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKID 217
Query: 209 DAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMEN----IKPDVSTC 264
DA+ L EM + TY+ ++ G C G + +A+ M+ E+ I P+ T
Sbjct: 218 DAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTY 277
Query: 265 DPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKA--RFLSHTM 322
+I A C++R+V++A V+ M PN LI G ++ KA + + +
Sbjct: 278 TLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLV 337
Query: 323 ATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHY 382
GV+ + +S L +EA +F M ++ ++PD S + L Y
Sbjct: 338 KLGGVSLSECFSSATVS-LIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERY 396
Query: 383 MHAINLLAEMCSNGIAYT 400
+ L E+ + T
Sbjct: 397 LDCFLLYQEIEKKDVKST 414
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 124/316 (39%), Gaps = 36/316 (11%)
Query: 80 IAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAI 139
+ D ++I F G +N A ++ ++ PD T+++ G C G+I A
Sbjct: 161 VCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAW 220
Query: 140 NFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIK 199
++ SVTY ++ +C+ G+ AL+LL ++E+E
Sbjct: 221 RLAKEMSKHDCVLN----SVTYSRILEGVCKSGDMERALELLAEMEKE------------ 264
Query: 200 SMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKP 259
D L ISP+ TY +I FC ++ +A+ + M P
Sbjct: 265 ---------DGGGL--------ISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP 307
Query: 260 D-VSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFL 318
+ V+ C + L + VK + ++ ++K +++ + + +A +
Sbjct: 308 NRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKI 367
Query: 319 SHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKP--DAETYSILIEGW 376
M RGV PD + + LC + L+ ++ KD+K D++ +++L+ G
Sbjct: 368 FRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGL 427
Query: 377 LNLPHYMHAINLLAEM 392
+ A L M
Sbjct: 428 CQQGNSWEAAKLAKSM 443
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 6/168 (3%)
Query: 177 ALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIY 234
AL +LR+ E + D YN +I+ + ++ A L EM + PDV TY ++I
Sbjct: 149 ALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMIN 208
Query: 235 GFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKAS--- 291
G+C G++ A M + + T ++ +CK +++A ++A M K
Sbjct: 209 GYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGG 268
Query: 292 -VEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMI 338
+ PN Y +I +C ++ +A + M RG P+ T ++I
Sbjct: 269 LISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLI 316
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 114/260 (43%), Gaps = 41/260 (15%)
Query: 71 LSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLC 130
L ++++ G+ PD+ T T +IN +C+ G+++ A+ + ++ K ++ + +++G+C
Sbjct: 187 LIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVC 246
Query: 131 LNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCE-------------VGETG-- 175
+G++ A+ +++ + + +VTY +I CE +G G
Sbjct: 247 KSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCM 306
Query: 176 ----AALQLLRQIEEEHTDVQMYNTIIKSMCE------DKCVS-------------DAYD 212
A L++ + E DV+ + +I + + +C S +A
Sbjct: 307 PNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEK 366
Query: 213 LYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALC 272
++ ML++ + PD + + C + + ++ +++K ST D IHA+
Sbjct: 367 IFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVK---STIDSDIHAVL 423
Query: 273 KERKVKQANSVVAAMIKASV 292
+Q NS AA + S+
Sbjct: 424 LLGLCQQGNSWEAAKLAKSM 443
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 29/211 (13%)
Query: 216 EMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKER 275
++L R PD+ Y Y RK F NV M ++ LC +
Sbjct: 103 DILKIRAKPDLIKYVIESY--------RKEECFVNVKTMR-----------IVLTLCNQA 143
Query: 276 KV-KQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTY 334
+ +A V+ + +V + YN +I + + A L M G+ PDV TY
Sbjct: 144 NLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITY 203
Query: 335 NIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM-- 392
MI+ C + +D+A L M D ++ TYS ++EG A+ LLAEM
Sbjct: 204 TSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEK 263
Query: 393 -------CSNGIAYTSKLDAICNDYNFDDEI 416
N + YT + A C ++ +
Sbjct: 264 EDGGGLISPNAVTYTLVIQAFCEKRRVEEAL 294
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 148/358 (41%), Gaps = 25/358 (6%)
Query: 13 SLFMRYHSHSPRPFSHEAVNAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLS 72
S + + + +P P VS H++L+ +P N+++ + + A+++
Sbjct: 75 SKLVAFAATNPEP------KTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVF 128
Query: 73 QQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLN 132
+++ L + PD + T ++ + G +K D TL+ +
Sbjct: 129 REMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRS 188
Query: 133 GEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQ 192
G A D + R +V++ L++ E G A L ++EE +V+
Sbjct: 189 GYFEIARKVLDRMPV--------RDAVSWNSLLSAYLEKGLVDEARALFDEMEER--NVE 238
Query: 193 MYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM 252
+N +I V +A ++++ M ++ DV ++N ++ + G + + FN M
Sbjct: 239 SWNFMISGYAAAGLVKEAKEVFDSMPVR----DVVSWNAMVTAYAHVGCYNEVLEVFNKM 294
Query: 253 KMENI-KPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQ 311
++ KPD T ++ A + Q V + K +E F+ L+D Y +
Sbjct: 295 LDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGK 354
Query: 312 MTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETY 369
+ KA + + R DV T+N +IS L + +A+ +F M + KP+ T+
Sbjct: 355 IDKALEVFRATSKR----DVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITF 408
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 88/204 (43%), Gaps = 8/204 (3%)
Query: 83 DIATLTILINCFCHLGRMNYAFSVLGKILKRAYQ-PDTTALTTLMKGLCLNGEIRSAINF 141
D+ + ++ + H+G N V K+L + + PD L +++ G +
Sbjct: 267 DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWV 326
Query: 142 HDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSM 201
H + G + + L++ + G+ AL++ R + DV +N+II +
Sbjct: 327 HVYIDKHGIEIE----GFLATALVDMYSKCGKIDKALEVFRATSKR--DVSTWNSIISDL 380
Query: 202 CEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVM-KMENIKPD 260
DA ++++EM+ + P+ T+ ++ G L +A F +M + ++P
Sbjct: 381 SVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPT 440
Query: 261 VSTCDPLIHALCKERKVKQANSVV 284
+ ++ L + K+++A +V
Sbjct: 441 IEHYGCMVDLLGRMGKIEEAEELV 464
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 11/218 (5%)
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
PD+ +N++ G+ + F + + I PD T L+ A + +++ +
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCT 343
+K ++ NV++ TLI+ Y + AR + R V P V YN MI+
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSAR----CVFDRIVEPCVVCYNAMITGYAR 207
Query: 344 SNMMDEAMSLFHYMDLKDIKPDAETY-----SILIEGWLNLPHYMHAINLLAEMCSNGIA 398
N +EA+SLF M K +KP+ T S + G L+L ++H C
Sbjct: 208 RNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKV 267
Query: 399 YTSKLDAICNDYNFDDEIEKF--MRYKETGGDADFLIA 434
T+ +D + DD + F MRYK+T + ++A
Sbjct: 268 NTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVA 305
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 159/376 (42%), Gaps = 36/376 (9%)
Query: 58 SLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQP 117
SL+R ++ L + EL G A IA + L + + G +N A V +I + P
Sbjct: 282 SLLRPDYGSQIHGLCIKSELAGNA--IAGCS-LCDMYARCGFLNSARRVFDQIER----P 334
Query: 118 DTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAA 177
DT + ++ GL NG A++ +++ GF +++ R L+ +
Sbjct: 335 DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPD----AISLRSLLCAQTKPMALSQG 390
Query: 178 LQLLRQIEEEH--TDVQMYNTIIK--SMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLI 233
+Q+ I + D+ + N+++ + C SD Y +N R + D ++NT++
Sbjct: 391 MQIHSYIIKWGFLADLTVCNSLLTMYTFC-----SDLYCCFNLFEDFRNNADSVSWNTIL 445
Query: 234 YGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVE 293
Q + + F +M + +PD T L+ + +K + V +K +
Sbjct: 446 TACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLA 505
Query: 294 PNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSL 353
P FI N LID Y + +AR + +M R DV +++ +I S +EA+ L
Sbjct: 506 PEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR----DVVSWSTLIVGYAQSGFGEEALIL 561
Query: 354 FHYMDLKDIKPD---------AETYSILIEGWLNLPHYM---HAINLLAEMCSNGIAYTS 401
F M I+P+ A ++ L+E L L M H I+ E CS + +
Sbjct: 562 FKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLA 621
Query: 402 KLDAICNDYNFDDEIE 417
+ + F DE++
Sbjct: 622 RAGRLNEAERFIDEMK 637
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 131/333 (39%), Gaps = 19/333 (5%)
Query: 47 PPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSV 106
P +N I+ L + AVS+ Q+ G PD +L L+ ++ +
Sbjct: 334 PDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQI 393
Query: 107 LGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLIN 166
I+K + D T +L+ ++ N +D F+ + SV++ ++
Sbjct: 394 HSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFED-------FRNNADSVSWNTILT 446
Query: 167 ELCEVGETGAALQLLRQI---EEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRIS 223
+ + L+L + + E E + M N +++ E + ++ L ++
Sbjct: 447 ACLQHEQPVEMLRLFKLMLVSECEPDHITMGN-LLRGCVEISSLKLGSQVHCYSLKTGLA 505
Query: 224 PDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSV 283
P+ F N LI + G L +A F+ M DV + LI + ++A +
Sbjct: 506 PEQFIKNGLIDMYAKCGSLGQARRIFDSMD----NRDVVSWSTLIVGYAQSGFGEEALIL 561
Query: 284 VAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATR-GVTPDVHTYNIMISWLC 342
M A +EPN + ++ + + + L TM T G++P + ++ L
Sbjct: 562 FKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLA 621
Query: 343 TSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
+ ++EA ++D ++PD + L+
Sbjct: 622 RAGRLNEAE---RFIDEMKLEPDVVVWKTLLSA 651
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/321 (18%), Positives = 132/321 (41%), Gaps = 49/321 (15%)
Query: 53 NNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRMNYAFSVLGKILK 112
++++G + N + ++ + ++ + D+A+ +I+CF G A + G++
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPER----DVASWNTVISCFYQSGEAEKALELFGRMES 201
Query: 113 RAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLINELCEVG 172
++P++ +LT + + H KGF+ ++E
Sbjct: 202 SGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE-------------LDEY---- 244
Query: 173 ETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTL 232
+AL V MY KC D ++ E+ K + +N++
Sbjct: 245 -VNSAL------------VDMYG---------KC--DCLEVAREVFQKMPRKSLVAWNSM 280
Query: 233 IYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASV 292
I G+ A G + V N M +E +P +T ++ A + R + + +I++ V
Sbjct: 281 IKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVV 340
Query: 293 EPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMS 352
++++ +LID Y + L+ T+ ++ ++N+MIS + +A+
Sbjct: 341 NADIYVNCSLIDLYFKCGEAN----LAETVFSKTQKDVAESWNVMISSYISVGNWFKAVE 396
Query: 353 LFHYMDLKDIKPDAETYSILI 373
++ M +KPD T++ ++
Sbjct: 397 VYDQMVSVGVKPDVVTFTSVL 417
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 131/290 (45%), Gaps = 13/290 (4%)
Query: 87 LTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVK 146
L+ LI F R++ A + + + + + G NG R A+ + D+
Sbjct: 170 LSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKV-WAAMAIGYSRNGSPRDALIVYVDML 228
Query: 147 AKGFQFQVDRVSVTYRFLIN-ELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDK 205
+ +SV + ++ + VG G Q++++ +E D +YN ++K E
Sbjct: 229 CSFIEPGNFSISVALKACVDLKDLRVGR-GIHAQIVKR--KEKVDQVVYNVLLKLYMESG 285
Query: 206 CVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCD 265
DA +++ M + +V T+N+LI ++ + F M+ E I +T
Sbjct: 286 LFDDARKVFDGMSER----NVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLT 341
Query: 266 PLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATR 325
++ A + + + A ++K+ +P+V + N+L+D Y ++ +R + M T+
Sbjct: 342 TILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK 401
Query: 326 GVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEG 375
D+ ++NIM++ + ++E ++LF +M + PD T+ L+ G
Sbjct: 402 ----DLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSG 447
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Query: 188 HTDVQMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVG 247
H DV Y +IK + +A L++E+ +K DV ++N +I G+ G ++A+
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALE 252
Query: 248 FFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYC 307
F M N++PD ST ++ A + ++ V + N+ I N LID Y
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 308 LINQMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYM 357
++ A L + + DV ++N +I N+ EA+ LF M
Sbjct: 313 KCGELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLLFQEM 358
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/341 (19%), Positives = 136/341 (39%), Gaps = 19/341 (5%)
Query: 38 HNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHL 97
H + P + + ++ + A L ++ +K D+ + +I+ +
Sbjct: 189 HKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAET 244
Query: 98 GRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRV 157
G A + ++K +PD + + T++ +G I H + GF + V
Sbjct: 245 GNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIV 304
Query: 158 SVTYRFLINELCEVGETGAALQLLRQIEEEHTDVQMYNTIIKSMCEDKCVSDAYDLYNEM 217
+ LI+ + GE A L ++ + DV +NT+I +A L+ EM
Sbjct: 305 NA----LIDLYSKCGELETACGLFERL--PYKDVISWNTLIGGYTHMNLYKEALLLFQEM 358
Query: 218 LLKRISPDVFTYNTLIYGFCAGG--QLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKER 275
L +P+ T +++ G + + + + +++ + S LI K
Sbjct: 359 LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 418
Query: 276 KVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYN 335
++ A+ V +++ S+ +N +I G+ + + + L M G+ PD T+
Sbjct: 419 DIEAAHQVFNSILHKSLSS----WNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFV 474
Query: 336 IMISWLCTSNMMDEAMSLFHYMDLKDIK--PDAETYSILIE 374
++S S M+D +F M +D K P E Y +I+
Sbjct: 475 GLLSACSHSGMLDLGRHIFRTMT-QDYKMTPKLEHYGCMID 514
>AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11286756-11288513 REVERSE
LENGTH=551
Length = 551
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 154/388 (39%), Gaps = 51/388 (13%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
N + F M +R +P + +N++LGSLV+ N + A+ L + GI D T ++
Sbjct: 171 NGLEVFGFMRRLRLSPSQSAYNSLLGSLVKENQFRVALCLYSAMVRNGIVSDELTWDLIA 230
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
C GR F K+++ + T L++ NGE + + ++ K +
Sbjct: 231 QILCEQGRSKSVF----KLMETGVES-CKIYTNLVECYSRNGEFDAVFSLIHEMDDKKLE 285
Query: 152 FQ-------------------VDRV---SVTYRF-----------LINELCEVGETGAAL 178
+D+V V +F +I LC++G+T A+
Sbjct: 286 LSFCSYGCVLDDACRLGDAEFIDKVLCLMVEKKFVTLGDSAVNDKIIERLCDMGKTFASE 345
Query: 179 QLLRQIEEEHTDVQMYNT----IIKSMCEDKCVSDAYDLYNEMLLKRISP-DVFTYNTLI 233
L R+ T V+++++ ++K++ K +A D+Y + K I+ D Y
Sbjct: 346 MLFRKACNGET-VRLWDSTYGCMLKALSRKKRTKEAVDVYRMICRKGITVLDESCYIEFA 404
Query: 234 YGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERKVKQANSVV----AAMIK 289
C + V ++ K D + + L K R K ++V +K
Sbjct: 405 NALCRDDNSSEEEEELLVDVIKRGKEDGNPQRSFLIRLWKWRSGKLEKALVLHEKIKKMK 464
Query: 290 ASVEPNVFIYNTLIDGYCLIN-QMTKARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMD 348
S++ N YN ++D + +M + + + + ++ IMI LC M
Sbjct: 465 GSLDVNA--YNAVLDRLMMRQKEMVEEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEMK 522
Query: 349 EAMSLFHYMDLKDIKPDAETYSILIEGW 376
+AM M +KPD TY LI G+
Sbjct: 523 KAMRSHDEMLRLGLKPDLVTYKRLILGF 550
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 141/360 (39%), Gaps = 53/360 (14%)
Query: 51 QFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINCFCHLGRM-----NYAFS 105
+ +I+ SL R + + +++ KG+ PD ++ LIN LG+M AF
Sbjct: 298 SWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLIN---ELGKMMLVPQGKAFH 354
Query: 106 VLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQFQVDRVSVTYRFLI 165
G +++ + D+T +L+ C + A + +G + + + Y +
Sbjct: 355 --GFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKM- 411
Query: 166 NELCEVGETGAALQLLRQIEEEHTDVQMYN-TIIKSMCED-------------------- 204
C V ++L R+I+ ++ + T + S C
Sbjct: 412 --KCHV----KCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLD 465
Query: 205 ---KCVSDAYDLYNEM--------LLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMK 253
V+ DLY +M + +V T+N +I + Q KA+ F+ M
Sbjct: 466 LTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMV 525
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
EN KP T L+ A +++ + + + E N+ + LID Y +
Sbjct: 526 SENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLE 585
Query: 314 KARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
K+R L G D +N+MIS ++ A++LF M+ D+KP T+ L+
Sbjct: 586 KSRELFDA----GNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALL 641
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 98/217 (45%), Gaps = 5/217 (2%)
Query: 161 YRFLINELCEVGETGAALQLLRQIEEEHT--DVQMYNTIIKSMCEDKCVSDAYDLYNEML 218
Y LI + A++ Q+++ T +N ++ + K L++E+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 219 LK--RISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIHALCKERK 276
+ +I PD +Y LI +C G KA+ M+ + ++ ++ +L K+ +
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 277 VKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVHTYNI 336
++ A+++ M+K E + YN I + + L M++ G+ PD +YN
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNY 283
Query: 337 MISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
+++ C M+DEA ++ ++ + P+A T+ LI
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLI 320
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 108/265 (40%), Gaps = 15/265 (5%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELK--GIAPDIATLTI 89
+A+ +F M FN +L + + ++ L ++ + I PD + I
Sbjct: 120 HAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGI 179
Query: 90 LINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSAINFHDDVKAKG 149
LI +C G A ++ ++ + + T A TT++ L GE+ A N +++ KG
Sbjct: 180 LIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKG 239
Query: 150 FQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT-----DVQMYNTIIKSMCED 204
+ +D + R + + + ++ IEE + D YN ++ + CE
Sbjct: 240 CE--LDNAAYNVRIM------SAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCER 291
Query: 205 KCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTC 264
+ +A +Y + +P+ T+ TLI+ C + F + PD +T
Sbjct: 292 GMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTL 351
Query: 265 DPLIHALCKERKVKQANSVVAAMIK 289
L+ L + +K A ++ + K
Sbjct: 352 KHLVVGLVENKKRDDAKGLIRTVKK 376
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 116/296 (39%), Gaps = 12/296 (4%)
Query: 34 VSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILINC 93
+ S N ++ P + G NH A+ +Q++ G + L+N
Sbjct: 90 IESHKNDPKIKEEPFYSTLIRSYGQASMFNH---AMRTFEQMDQYGTPRSAVSFNALLNA 146
Query: 94 FCHLGRMNYAFSVLGKILKRAYQ--PDTTALTTLMKGLCLNGEIRSAINFHDDVKAKGFQ 151
H + + +I +R + PD + L+K C +G AI ++ KG +
Sbjct: 147 CLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGME 206
Query: 152 FQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE--HTDVQMYNTIIKSMCEDKCVSD 209
++ + +++ L + GE A L ++ ++ D YN I S + +
Sbjct: 207 V----TTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPER 261
Query: 210 AYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDPLIH 269
+L EM + PD +YN L+ +C G L +A + ++ N P+ +T LI
Sbjct: 262 VKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIF 321
Query: 270 ALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATR 325
LC R +Q ++ + P+ L+ G + A+ L T+ +
Sbjct: 322 HLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKK 377
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 94/231 (40%), Gaps = 5/231 (2%)
Query: 151 QFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHT----DVQMYNTIIKSMCEDKC 206
Q+ R +V++ L+N QL +I + + D Y +IKS C+
Sbjct: 130 QYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGT 189
Query: 207 VSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDVSTCDP 266
A ++ +M K + + T++ G+L A +N M + + D + +
Sbjct: 190 PEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNV 249
Query: 267 LIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRG 326
I + KE ++ ++ M ++P+ YN L+ YC + +A+ + +
Sbjct: 250 RIMSAQKE-SPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNN 308
Query: 327 VTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWL 377
P+ T+ +I LC S + ++ ++F PD T L+ G +
Sbjct: 309 CAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLV 359
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%)
Query: 273 KERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMTKARFLSHTMATRGVTPDVH 332
K K A + + M + ++P+V Y TLIDGY + ++ KA+ + M +G P+V
Sbjct: 701 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVF 760
Query: 333 TYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILIEGWLNLPHYMHAINLLAEM 392
TYN MI LC + EA L M+ + P+ YS L+ A ++ EM
Sbjct: 761 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
Query: 393 CSNG 396
G
Sbjct: 821 VKKG 824
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 149/386 (38%), Gaps = 62/386 (16%)
Query: 32 NAVSSFHNMLSMRPAPPITQFNNILGSLVRMNHYPTAVSLSQQLELKGIAPDIATLTILI 91
++S + +ML +P F IL S ++ + L + G + LT LI
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 92 NCFCHLGRMNYAFSVLGKILKRAYQPDTTALT----TLMKGLCLNGEIRSAINFHDDVKA 147
+ +C G + A V + P ++ L+ L+ G N ++ A +K
Sbjct: 96 SMYCKCGLVADARKVFEE------NPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKE 149
Query: 148 KGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEE------HTDVQMYNTIIKSM 201
G VD SVT L+ LC V E L L R + + ++V + N+ I
Sbjct: 150 TGVS--VD--SVTMLGLV-PLCTVPEY---LWLGRSLHGQCVKGGLDSEVAVLNSFITMY 201
Query: 202 CEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNVMKMENIKPDV 261
+ V L++EM +K + T+N +I G+ G + + MK + PD
Sbjct: 202 MKCGSVEAGRRLFDEMPVK----GLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
Query: 262 STCDPLIHALCKERKVKQANSVVAAMIKA-SVEPNVFIYNTLIDGYCLINQMTKAR---- 316
T ++ + C K+ V ++++ PNVF+ N I Y + KAR
Sbjct: 258 FTLVSVLSS-CAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFD 316
Query: 317 ---------------------------FLSHTMATRGVTPDVHTYNIMISWLCTSNMMDE 349
L M RG+ PD + +++S S + D+
Sbjct: 317 IMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDK 376
Query: 350 AMSLFHYMDLK-DIKPDAETYSILIE 374
+ LF M + ++P E YS L++
Sbjct: 377 GLELFRAMKREYKLEPGPEHYSCLVD 402
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 133/307 (43%), Gaps = 31/307 (10%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G D+ T+LI+ + G ++YA V + +++ T TT++ G G RS
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKS----TVTWTTMISGCVKMG--RSY 231
Query: 139 INFH-------DDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEHTDV 191
++ D+V G+ +V I E G+ A L +E D
Sbjct: 232 VSLQLFYQLMEDNVVPDGYILS----TVLSACSILPFLEGGKQIHAHILRYGLE---MDA 284
Query: 192 QMYNTIIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGGQLRKAVGFFNV 251
+ N +I S + V A+ L+N M K ++ ++ TL+ G+ ++A+ F
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPNK----NIISWTTLLSGYKQNALHKEAMELFTS 340
Query: 252 MKMENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQ 311
M +KPD+ C ++ + + V A IKA++ + ++ N+LID Y +
Sbjct: 341 MSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC 400
Query: 312 MTKARFLSHTMATRGVTPDVHTYNIMI---SWLCTSNMMDEAMSLFHYMDLKDIKPDAET 368
+T AR + A DV +N MI S L T + EA+++F M + I+P T
Sbjct: 401 LTDARKVFDIFA----AADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLT 456
Query: 369 YSILIEG 375
+ L+
Sbjct: 457 FVSLLRA 463
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 127/306 (41%), Gaps = 21/306 (6%)
Query: 79 GIAPDIATLTILINCFCHLGRMNYAFSVLGKILKRAYQPDTTALTTLMKGLCLNGEIRSA 138
G+ D + + +LI+ + GR+ A K+ + + TTL+ G N + A
Sbjct: 279 GLEMDASLMNVLIDSYVKCGRVIAAH----KLFNGMPNKNIISWTTLLSGYKQNALHKEA 334
Query: 139 INFHDDVKAKGFQFQVDRVSVTYRFLINELCEVGETGAALQLLRQIEEEH--TDVQMYNT 196
+ + G + + S ++ + G Q+ + + D + N+
Sbjct: 335 MELFTSMSKFGLKPDMYACSS----ILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNS 390
Query: 197 IIKSMCEDKCVSDAYDLYNEMLLKRISPDVFTYNTLIYGFCAGG---QLRKAVGFFNVMK 253
+I + C++DA +++ + DV +N +I G+ G +L +A+ F M+
Sbjct: 391 LIDMYAKCDCLTDARKVFDIF----AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Query: 254 MENIKPDVSTCDPLIHALCKERKVKQANSVVAAMIKASVEPNVFIYNTLIDGYCLINQMT 313
I+P + T L+ A + + + M K + ++F + LID Y +
Sbjct: 447 FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLK 506
Query: 314 KARFLSHTMATRGVTPDVHTYNIMISWLCTSNMMDEAMSLFHYMDLKDIKPDAETYSILI 373
+R + M + D+ +N M + + +EA++LF + L +PD T++ ++
Sbjct: 507 DSRLVFDEMKVK----DLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMV 562
Query: 374 EGWLNL 379
NL
Sbjct: 563 TAAGNL 568