Miyakogusa Predicted Gene

Lj0g3v0210389.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0210389.1 Non Chatacterized Hit- tr|I1MB74|I1MB74_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3265
PE=,55.56,0.00002,DUF1296,Protein of unknown function
DUF1296,CUFF.13504.1
         (101 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07660.1 | Symbols:  | Kinase-related protein of unknown func...    46   4e-06

>AT3G07660.1 | Symbols:  | Kinase-related protein of unknown
          function (DUF1296) | chr3:2445275-2450372 REVERSE
          LENGTH=841
          Length = 841

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/53 (56%), Positives = 35/53 (66%), Gaps = 3/53 (5%)

Query: 23 GGGLRVLISNSVRKTIQNIKETRV--REEDEIYAML-KFSIFPSETAQKLLLH 72
          G G RV IS + RK IQNIKET      EDEI AML + ++ P ETAQ+LLL 
Sbjct: 3  GSGARVSISATTRKMIQNIKETTAGNYSEDEIIAMLHECNMDPDETAQRLLLQ 55