Miyakogusa Predicted Gene

Lj0g3v0210279.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0210279.1 Non Chatacterized Hit- tr|I1M4B4|I1M4B4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,78.29,0,Lycopene_cycl,Lycopene cyclase-type, FAD-binding;
FAD/NAD(P)-binding domain,NULL; seg,NULL; no descr,CUFF.13499.1
         (502 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G10230.1 | Symbols: LYC | lycopene cyclase | chr3:3164340-316...   532   e-151
AT3G10230.2 | Symbols: LYC | lycopene cyclase | chr3:3164340-316...   440   e-123
AT5G57030.1 | Symbols: LUT2 | Lycopene beta/epsilon cyclase prot...   266   3e-71

>AT3G10230.1 | Symbols: LYC | lycopene cyclase |
           chr3:3164340-3165845 REVERSE LENGTH=501
          Length = 501

 Score =  532 bits (1370), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 247/444 (55%), Positives = 325/444 (73%), Gaps = 2/444 (0%)

Query: 58  FLDMMPEYQPEALDFDLPWCHPSDRARFDVIIIGAGPAGIRLAEQVSRYGIKVCCVDPDP 117
            LD++PE + E LDF+LP    S     D+ I+G GPAG+ +A+QVS  G+ VC +DP P
Sbjct: 56  LLDLVPETKKENLDFELPLYDTSKSQVVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPSP 115

Query: 118 LSIWPNNYGVWCDEFESLGLEDCLDKTWAMASVHIDEGKTKYLDRCYGRVSRKKLKERLV 177
             IWPNNYGVW DEFE++ L DCLD TW+ A V++DEG  K L R YGRV+RK+LK +++
Sbjct: 116 KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKML 175

Query: 178 EGCVFNGVRFHKAQAWKIVHQEFESMLLCDDGTELKGSLIVDASGFGSDFVKYDKVRNCG 237
           + C+ NGV+FH+++   +VH+E  S ++C DG +++ S+++DA+GF    V+YDK  N G
Sbjct: 176 QKCITNGVKFHQSKVTNVVHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNPG 235

Query: 238 CQIAHGVLAEVEDHPFDLDKMVLMDWRDSHLGNEPNLRASNLKVPTFLYAMPFSSNLVFL 297
            Q+A+G++AEV+ HPFD+DKMV MDWRD HL + P L+  N K+PTFLYAMPFSSN +FL
Sbjct: 236 YQVAYGIVAEVDGHPFDVDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNRIFL 295

Query: 298 EETSLVSRPVLSYMEVKRRMVARLRHLGMRVKRVLEDEKCLIPMGGPLPMIPQNVMAIGG 357
           EETSLV+RP L   +++ RM ARL+HLG+ VKR+ EDE+C+IPMGGPLP++PQ V+ IGG
Sbjct: 296 EETSLVARPGLRMEDIQERMAARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVGIGG 355

Query: 358 NSGVVHPSTGYSVARSMXXXXXXXXXXXESLG--STRMIRGKPLYAKVWNSLWPIESRLN 415
            +G+VHPSTGY VAR++             LG  S+  +RG  L A+VW  LWPIE R  
Sbjct: 356 TAGMVHPSTGYMVARTLAAAPIVANAIVRYLGSPSSNSLRGDQLSAEVWRDLWPIERRRQ 415

Query: 416 REFYSFGMETLLKLDLNGTRRFFDAFFDLKPYQWQGFLSSRLSLKELIWLSLSLFGHASN 475
           REF+ FGM+ LLKLDL+ TRRFFDAFFDL+P+ W GFLSSRL L EL+   LSLF HASN
Sbjct: 416 REFFCFGMDILLKLDLDATRRFFDAFFDLQPHYWHGFLSSRLFLPELLVFGLSLFSHASN 475

Query: 476 PSRFDIVTKCPVPLAKMMGNMTLD 499
            SR +I+TK  VPLAKM+ N+  D
Sbjct: 476 TSRLEIMTKGTVPLAKMINNLVQD 499


>AT3G10230.2 | Symbols: LYC | lycopene cyclase |
           chr3:3164340-3165449 REVERSE LENGTH=369
          Length = 369

 Score =  440 bits (1132), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 206/367 (56%), Positives = 272/367 (74%), Gaps = 2/367 (0%)

Query: 135 LGLEDCLDKTWAMASVHIDEGKTKYLDRCYGRVSRKKLKERLVEGCVFNGVRFHKAQAWK 194
           + L DCLD TW+ A V++DEG  K L R YGRV+RK+LK ++++ C+ NGV+FH+++   
Sbjct: 1   MDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKMLQKCITNGVKFHQSKVTN 60

Query: 195 IVHQEFESMLLCDDGTELKGSLIVDASGFGSDFVKYDKVRNCGCQIAHGVLAEVEDHPFD 254
           +VH+E  S ++C DG +++ S+++DA+GF    V+YDK  N G Q+A+G++AEV+ HPFD
Sbjct: 61  VVHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNPGYQVAYGIVAEVDGHPFD 120

Query: 255 LDKMVLMDWRDSHLGNEPNLRASNLKVPTFLYAMPFSSNLVFLEETSLVSRPVLSYMEVK 314
           +DKMV MDWRD HL + P L+  N K+PTFLYAMPFSSN +FLEETSLV+RP L   +++
Sbjct: 121 VDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNRIFLEETSLVARPGLRMEDIQ 180

Query: 315 RRMVARLRHLGMRVKRVLEDEKCLIPMGGPLPMIPQNVMAIGGNSGVVHPSTGYSVARSM 374
            RM ARL+HLG+ VKR+ EDE+C+IPMGGPLP++PQ V+ IGG +G+VHPSTGY VAR++
Sbjct: 181 ERMAARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTL 240

Query: 375 XXXXXXXXXXXESLG--STRMIRGKPLYAKVWNSLWPIESRLNREFYSFGMETLLKLDLN 432
                        LG  S+  +RG  L A+VW  LWPIE R  REF+ FGM+ LLKLDL+
Sbjct: 241 AAAPIVANAIVRYLGSPSSNSLRGDQLSAEVWRDLWPIERRRQREFFCFGMDILLKLDLD 300

Query: 433 GTRRFFDAFFDLKPYQWQGFLSSRLSLKELIWLSLSLFGHASNPSRFDIVTKCPVPLAKM 492
            TRRFFDAFFDL+P+ W GFLSSRL L EL+   LSLF HASN SR +I+TK  VPLAKM
Sbjct: 301 ATRRFFDAFFDLQPHYWHGFLSSRLFLPELLVFGLSLFSHASNTSRLEIMTKGTVPLAKM 360

Query: 493 MGNMTLD 499
           + N+  D
Sbjct: 361 INNLVQD 367


>AT5G57030.1 | Symbols: LUT2 | Lycopene beta/epsilon cyclase protein
           | chr5:23077398-23079818 FORWARD LENGTH=524
          Length = 524

 Score =  266 bits (679), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 152/405 (37%), Positives = 231/405 (57%), Gaps = 15/405 (3%)

Query: 85  FDVIIIGAGPAGIRLAEQVSRYGIKVCCVDPD-PLSIWPNNYGVWCDEFESLGLEDCLDK 143
            D+++IG GPAG+ LA + ++ G+KV  + PD P +   NNYGVW DEF  LGL+ C++ 
Sbjct: 109 LDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFT---NNYGVWEDEFNDLGLQKCIEH 165

Query: 144 TWAMASVHIDEGKTKYLDRCYGRVSRKKLKERLVEGCVFNGVRFHKAQAWKIVH-QEFES 202
            W    V++D+ K   + R YGRVSR+ L E L+  CV +GV +  ++   I    +   
Sbjct: 166 VWRETIVYLDDDKPITIGRAYGRVSRRLLHEELLRRCVESGVSYLSSKVDSITEASDGLR 225

Query: 203 MLLCDDGTELKGSLIVDASGFGS-DFVKYD--KVRNCGCQIAHGVLAEVEDHPFDLDKMV 259
           ++ CDD   +   L   ASG  S   ++Y+    R C  Q A+GV  EVE+ P+D D+MV
Sbjct: 226 LVACDDNNVIPCRLATVASGAASGKLLQYEVGGPRVC-VQTAYGVEVEVENSPYDPDQMV 284

Query: 260 LMDWRDSHLGNEPNLRASNLKVPTFLYAMPFSSNLVFLEETSLVSRPVLSYMEVKRRMVA 319
            MD+RD    NE  +R+   + PTFLYAMP + + +F EET L S+ V+ +  +K +++ 
Sbjct: 285 FMDYRD--YTNE-KVRSLEAEYPTFLYAMPMTKSRLFFEETCLASKDVMPFDLLKTKLML 341

Query: 320 RLRHLGMRVKRVLEDEKCLIPMGGPLPMIPQNVMAIGGNSGVVHPSTGYSVARSMXXXXX 379
           RL  LG+R+ +  E+E   IP+GG LP   Q  +A G  + +VHP+TGYSV RS+     
Sbjct: 342 RLDTLGIRILKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPK 401

Query: 380 XXXXXXESL--GSTRMIRGKPLYAKVWNSLWPIESRLNREFYSFGMETLLKLDLNGTRRF 437
                 E L   +T+ I    +  + W++LWP E +  R F+ FG+  +++ D  G R F
Sbjct: 402 YASVIAEILREETTKQINSN-ISRQAWDTLWPPERKRQRAFFLFGLALIVQFDTEGIRSF 460

Query: 438 FDAFFDLKPYQWQGFLSSRLSLKELIWLSLSLFGHASNPSRFDIV 482
           F  FF L  + WQGFL S L+  +L+  +L +F  + N  R  ++
Sbjct: 461 FRTFFRLPKWMWQGFLGSTLTSGDLVLFALYMFVISPNNLRKGLI 505