Miyakogusa Predicted Gene

Lj0g3v0210009.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0210009.1 tr|Q0WP75|Q0WP75_ARATH Kinesin like protein
(Fragment) OS=Arabidopsis thaliana GN=At4g05190 PE=2
SV=,58.33,5e-19,coiled-coil,NULL,CUFF.13474.1
         (93 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G05190.1 | Symbols: ATK5 | kinesin 5 | chr4:2675338-2679482 F...    99   7e-22
AT4G21270.1 | Symbols: ATK1, KATA, KATAP | kinesin 1 | chr4:1132...    97   2e-21
AT5G54670.1 | Symbols: ATK3, KATC | kinesin 3 | chr5:22209912-22...    82   8e-17
AT4G27180.1 | Symbols: ATK2, KATB | kinesin 2 | chr4:13615057-13...    81   1e-16

>AT4G05190.1 | Symbols: ATK5 | kinesin 5 | chr4:2675338-2679482
           FORWARD LENGTH=790
          Length = 790

 Score = 98.6 bits (244), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 49/84 (58%), Positives = 66/84 (78%)

Query: 2   SLQQYNSRLQSDLETTNEAHKRLETEKSTIVENLSNVRGHNKALQEQLSSLKASQDEATK 61
           SLQQYN++LQ+DLE   EAH R E EKS+I+ENL+ +RGH+K+LQ+QL+S + SQDEA K
Sbjct: 228 SLQQYNTKLQTDLEVAREAHTRAEKEKSSILENLTTLRGHSKSLQDQLASSRVSQDEAVK 287

Query: 62  QNEILANELKFPREELKQIRDDRD 85
           Q + L  E+   + EL+Q+RDDRD
Sbjct: 288 QKDSLLMEVNNLQSELQQVRDDRD 311


>AT4G21270.1 | Symbols: ATK1, KATA, KATAP | kinesin 1 |
           chr4:11329579-11333884 REVERSE LENGTH=793
          Length = 793

 Score = 97.4 bits (241), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 51/86 (59%), Positives = 66/86 (76%)

Query: 2   SLQQYNSRLQSDLETTNEAHKRLETEKSTIVENLSNVRGHNKALQEQLSSLKASQDEATK 61
           SLQQYNS+LQ+DLET   A  R E EKS+I+ENLS +RGH+K+LQ+QLSS +  QD+A K
Sbjct: 231 SLQQYNSKLQTDLETVRAALTRAEKEKSSILENLSTLRGHSKSLQDQLSSSRVLQDDAIK 290

Query: 62  QNEILANELKFPREELKQIRDDRDHQ 87
           Q + L +E+   R EL+Q+RDDRD Q
Sbjct: 291 QKDSLLSEVTNLRNELQQVRDDRDRQ 316


>AT5G54670.1 | Symbols: ATK3, KATC | kinesin 3 |
           chr5:22209912-22213843 FORWARD LENGTH=754
          Length = 754

 Score = 81.6 bits (200), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 60/84 (71%)

Query: 2   SLQQYNSRLQSDLETTNEAHKRLETEKSTIVENLSNVRGHNKALQEQLSSLKASQDEATK 61
           SLQ YNS+LQ DL+  +E  KR E E++ I+EN+ N++G   ALQEQL++ KASQ++  K
Sbjct: 207 SLQLYNSKLQGDLDEAHETIKRGEKERTAIIENIGNLKGQFSALQEQLAASKASQEDIMK 266

Query: 62  QNEILANELKFPREELKQIRDDRD 85
           Q   L NE+   + EL+Q++DDRD
Sbjct: 267 QKGELVNEIASLKVELQQVKDDRD 290


>AT4G27180.1 | Symbols: ATK2, KATB | kinesin 2 |
           chr4:13615057-13618689 REVERSE LENGTH=745
          Length = 745

 Score = 81.3 bits (199), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 62/88 (70%)

Query: 2   SLQQYNSRLQSDLETTNEAHKRLETEKSTIVENLSNVRGHNKALQEQLSSLKASQDEATK 61
           SLQ YNS+LQ DL+  +E  KR E E++ IVE++ N++G  KALQ+QL++ K SQD+  K
Sbjct: 198 SLQLYNSKLQGDLDEAHENIKRGEKERTGIVESIGNLKGQFKALQDQLAASKVSQDDVMK 257

Query: 62  QNEILANELKFPREELKQIRDDRDHQQT 89
           Q + L NE+   + E++Q++DDRD   T
Sbjct: 258 QKDELVNEIVSLKVEIQQVKDDRDRHIT 285