Miyakogusa Predicted Gene

Lj0g3v0209599.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0209599.1 Non Chatacterized Hit- tr|I1H9R9|I1H9R9_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,58.89,3e-18,
,CUFF.13443.1
         (99 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36810.1 | Symbols:  | ARM repeat superfamily protein | chr2:...   123   3e-29

>AT2G36810.1 | Symbols:  | ARM repeat superfamily protein |
            chr2:15425739-15439462 REVERSE LENGTH=1716
          Length = 1716

 Score =  123 bits (308), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 58/99 (58%), Positives = 75/99 (75%)

Query: 1    MASTVQAFDAPWPIIQANAMYMCGSMLSLSDNQHILADYHTQVFGMLVGKMSQSPDAIVR 60
            MAST+QAFDAPWP+IQANA++   +MLSLS++QHI++ Y+ QVF  LV KM++S D++VR
Sbjct: 1616 MASTIQAFDAPWPVIQANAIHFSTTMLSLSEDQHIISLYYPQVFETLVSKMTRSQDSVVR 1675

Query: 61   ATCSSALGLLLKSSNSCSWRSVHLDREDSTIRNHDAEST 99
            A CSSA GLLL+SS S  WR   LD  DS  + +D ES 
Sbjct: 1676 AACSSAFGLLLRSSKSTLWRGARLDGTDSGRKANDLESV 1714