Miyakogusa Predicted Gene
- Lj0g3v0209329.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0209329.1 Non Chatacterized Hit- tr|I1KH27|I1KH27_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2711
PE=,95.31,0,seg,NULL; no description,NULL; DEAD,DNA/RNA helicase,
DEAD/DEAH box type, N-terminal; Helicase_C,Hel,CUFF.13453.1
(426 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 769 0.0
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 769 0.0
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 749 0.0
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 665 0.0
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 656 0.0
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 269 3e-72
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 269 3e-72
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 269 3e-72
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 264 9e-71
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 264 9e-71
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 248 4e-66
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 246 2e-65
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 245 3e-65
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 240 2e-63
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 239 3e-63
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 237 1e-62
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 236 2e-62
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 233 2e-61
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 228 4e-60
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 203 2e-52
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 197 2e-50
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 195 5e-50
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 193 2e-49
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 190 2e-48
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 189 3e-48
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 184 7e-47
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 184 7e-47
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 184 7e-47
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 184 7e-47
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 182 3e-46
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 182 3e-46
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 182 3e-46
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 181 1e-45
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 180 2e-45
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 178 5e-45
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 178 8e-45
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 178 8e-45
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 176 2e-44
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 176 4e-44
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 173 2e-43
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 173 3e-43
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 173 3e-43
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 173 3e-43
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 172 5e-43
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 171 7e-43
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 171 8e-43
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 169 4e-42
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 167 2e-41
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 166 3e-41
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 164 1e-40
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 164 1e-40
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 163 3e-40
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 162 3e-40
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 161 9e-40
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 159 2e-39
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 152 5e-37
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 152 5e-37
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 150 1e-36
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 150 1e-36
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 149 3e-36
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 145 5e-35
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 145 7e-35
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 143 2e-34
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 142 4e-34
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 141 1e-33
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 140 2e-33
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 139 3e-33
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 139 5e-33
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 136 3e-32
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 134 2e-31
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 129 4e-30
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 123 3e-28
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 111 8e-25
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 107 1e-23
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 104 1e-22
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 103 3e-22
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 97 2e-20
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 73 4e-13
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 60 2e-09
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 57 3e-08
AT3G05740.1 | Symbols: RECQI1 | RECQ helicase l1 | chr3:1698180-... 55 1e-07
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 769 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/427 (87%), Positives = 390/427 (91%), Gaps = 1/427 (0%)
Query: 1 MGELKDTXXXXXXXXXXXXXXXKAPDSA-KPAAETAKKGYVGIHSSGFRDFLLKPELLRA 59
MG+ +D K PDS K E KKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1 MGDARDNEAYEEELLDYEEEDEKVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRA 60
Query: 60 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVL 119
IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQI+P PGQV+ALVL
Sbjct: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVL 120
Query: 120 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILAL 179
CHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIK+HK+LLKNECPHIVVGTPGR+LAL
Sbjct: 121 CHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLAL 180
Query: 180 TRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVC 239
R+KDL LKNVRHFILDECDKMLESLDMRRDVQEIFK+TPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 AREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
Query: 240 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSR 299
KKFMQDPMEIYVDDEAKLTLHGLVQHYIKL + EKNRKLNDLLDALDFNQVVIFVKSVSR
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300
Query: 300 AAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIV 359
AAELNKLLVECNFPSICIHSGMSQEERL RYK FKEG +RILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIV 360
Query: 360 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQID 419
INYDMPDSADTYLHRVGRAGRFGTKGLAITFV+S+ DSEVLNQVQ RFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQID 420
Query: 420 TATYMPN 426
T+TYMP+
Sbjct: 421 TSTYMPS 427
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 769 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/427 (87%), Positives = 390/427 (91%), Gaps = 1/427 (0%)
Query: 1 MGELKDTXXXXXXXXXXXXXXXKAPDSA-KPAAETAKKGYVGIHSSGFRDFLLKPELLRA 59
MG+ +D K PDS K E KKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1 MGDARDNEAYEEELLDYEEEDEKVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRA 60
Query: 60 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVL 119
IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQI+P PGQV+ALVL
Sbjct: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVL 120
Query: 120 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILAL 179
CHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIK+HK+LLKNECPHIVVGTPGR+LAL
Sbjct: 121 CHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLAL 180
Query: 180 TRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVC 239
R+KDL LKNVRHFILDECDKMLESLDMRRDVQEIFK+TPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 AREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
Query: 240 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSR 299
KKFMQDPMEIYVDDEAKLTLHGLVQHYIKL + EKNRKLNDLLDALDFNQVVIFVKSVSR
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300
Query: 300 AAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIV 359
AAELNKLLVECNFPSICIHSGMSQEERL RYK FKEG +RILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIV 360
Query: 360 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQID 419
INYDMPDSADTYLHRVGRAGRFGTKGLAITFV+S+ DSEVLNQVQ RFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQID 420
Query: 420 TATYMPN 426
T+TYMP+
Sbjct: 421 TSTYMPS 427
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/468 (79%), Positives = 390/468 (83%), Gaps = 42/468 (8%)
Query: 1 MGELKDTXXXXXXXXXXXXXXXKAPDSA-KPAAETAKKGYVGIHSSGFRDFLLKPELLRA 59
MG+ +D K PDS K E KKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1 MGDARDNEAYEEELLDYEEEDEKVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRA 60
Query: 60 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVL 119
IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQI+P PGQV+ALVL
Sbjct: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVL 120
Query: 120 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILAL 179
CHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIK+HK+LLKNECPHIVVGTPGR+LAL
Sbjct: 121 CHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLAL 180
Query: 180 TRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVC 239
R+KDL LKNVRHFILDECDKMLESLDMRRDVQEIFK+TPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 AREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
Query: 240 KKFMQ-----------------------------------------DPMEIYVDDEAKLT 258
KKFMQ DPMEIYVDDEAKLT
Sbjct: 241 KKFMQDGLRTLSGDSVALWWVGFGSGYCVFPRFHRARMGLNVPSNIDPMEIYVDDEAKLT 300
Query: 259 LHGLVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIH 318
LHGLVQHYIKL + EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIH
Sbjct: 301 LHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIH 360
Query: 319 SGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRA 378
SGMSQEERL RYK FKEG +RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRA
Sbjct: 361 SGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRA 420
Query: 379 GRFGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQIDTATYMPN 426
GRFGTKGLAITFV+S+ DSEVLNQVQ RFEVDIKELPEQIDT+TYMP+
Sbjct: 421 GRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQIDTSTYMPS 468
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/344 (91%), Positives = 332/344 (96%)
Query: 83 MDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPD 142
MDVICQAKSGMGKTAVFVLS+LQQI+P PGQV+ALVLCHTRELAYQIC+EF RFSTYLPD
Sbjct: 1 MDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPD 60
Query: 143 IKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKML 202
KV+VFYGGVNIK+HK+LLKNECPHIVVGTPGR+LAL R+KDL LKNVRHFILDECDKML
Sbjct: 61 TKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 120
Query: 203 ESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 262
ESLDMRRDVQEIFK+TPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL
Sbjct: 121 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 180
Query: 263 VQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 322
VQHYIKL + EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS
Sbjct: 181 VQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 240
Query: 323 QEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 382
QEERL RYK FKEG +RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG
Sbjct: 241 QEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 300
Query: 383 TKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQIDTATYMPN 426
TKGLAITFV+S+ DSEVLNQVQ RFEVDIKELPEQIDT+TYMP+
Sbjct: 301 TKGLAITFVASASDSEVLNQVQERFEVDIKELPEQIDTSTYMPS 344
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/486 (69%), Positives = 367/486 (75%), Gaps = 60/486 (12%)
Query: 1 MGELKDTXXXXXXXXXXXXXXXKAPDSA-KPAAETAKKGYVGIHSSGFRDFLLKPELLRA 59
MG+ +D K PDS K E KKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1 MGDARDNEAYEEELLDYEEEDEKVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRA 60
Query: 60 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVL 119
IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQI+P PGQV+ALVL
Sbjct: 61 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVL 120
Query: 120 CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILAL 179
CHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIK+HK+LLKNECPHIVVGTPGR+LAL
Sbjct: 121 CHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLAL 180
Query: 180 TRDKDLGLKNVRHFILDECDK------------------------MLESLDMRRDVQEIF 215
R+KDL LKNVRHFILDECDK M+ S + ++++ +
Sbjct: 181 AREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
Query: 216 K------LTPHDKQVMMFSATLSKEIRPVC----------------------------KK 241
K L V +FS + +C K+
Sbjct: 241 KKFMQDFLENETVSVRLFSFGVENSEWRLCSFGFIVLVWVSMFRAILMFHSKTHIFEEKR 300
Query: 242 FMQ-DPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRA 300
+ + PMEIYVDDEAKLTLHGLVQHYIKL + EKNRKLNDLLDALDFNQVVIFVKSVSRA
Sbjct: 301 WTRISPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRA 360
Query: 301 AELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVI 360
AELNKLLVECNFPSICIHSGMSQEERL RYK FKEG +RILVATDLVGRGIDIERVNIVI
Sbjct: 361 AELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVI 420
Query: 361 NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQIDT 420
NYDMPDSADTYLHRVGRAGRFGTKGLAITFV+S+ DSEVLNQVQ RFEVDIKELPEQIDT
Sbjct: 421 NYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQIDT 480
Query: 421 ATYMPN 426
+TYMP+
Sbjct: 481 STYMPS 486
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/401 (38%), Positives = 235/401 (58%), Gaps = 15/401 (3%)
Query: 25 PDSAKPAAE-TAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGM 83
PD+ A+ TA KG + F D+ LK +LL+ I + GFE PS +Q E IP A+ G
Sbjct: 109 PDTRYQTADVTATKG------NEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGS 162
Query: 84 DVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDI 143
D++ +AK+G GKT F + L++IDP + A++L TRELA Q + S YL +I
Sbjct: 163 DILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYL-NI 221
Query: 144 KVAVFYGGVNIKVHKELLKNECP-HIVVGTPGRILALTRDKDLGLKNVRHFILDECDKML 202
+V V GG +++ ++++ P H++VGTPGRIL LT+ LK+ ++DE DK+L
Sbjct: 222 QVMVTTGGTSLR--DDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLL 279
Query: 203 ESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 262
S + + ++E+ + P ++Q +MFSAT ++ + ++ P I + D+ LTL G+
Sbjct: 280 -SAEFQPSLEELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQ--LTLMGV 336
Query: 263 VQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 322
Q+Y +++ +K LN L L NQ +IF SV+R L K + E + IH+ M
Sbjct: 337 TQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMV 396
Query: 323 QEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 382
Q+ R + + F+ G R LV TDL RGIDI+ VN+VIN+D P ++++YLHRVGR+GRFG
Sbjct: 397 QDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFG 456
Query: 383 TKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQIDTATY 423
GLA+ V+ D + Q + +IK +P ID A Y
Sbjct: 457 HLGLAVNLVTYE-DRFKMYQTEQELGTEIKPIPSNIDQAIY 496
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/401 (38%), Positives = 235/401 (58%), Gaps = 15/401 (3%)
Query: 25 PDSAKPAAE-TAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGM 83
PD+ A+ TA KG + F D+ LK +LL+ I + GFE PS +Q E IP A+ G
Sbjct: 109 PDTRYQTADVTATKG------NEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGS 162
Query: 84 DVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDI 143
D++ +AK+G GKT F + L++IDP + A++L TRELA Q + S YL +I
Sbjct: 163 DILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYL-NI 221
Query: 144 KVAVFYGGVNIKVHKELLKNECP-HIVVGTPGRILALTRDKDLGLKNVRHFILDECDKML 202
+V V GG +++ ++++ P H++VGTPGRIL LT+ LK+ ++DE DK+L
Sbjct: 222 QVMVTTGGTSLR--DDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLL 279
Query: 203 ESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 262
S + + ++E+ + P ++Q +MFSAT ++ + ++ P I + D+ LTL G+
Sbjct: 280 -SAEFQPSLEELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQ--LTLMGV 336
Query: 263 VQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 322
Q+Y +++ +K LN L L NQ +IF SV+R L K + E + IH+ M
Sbjct: 337 TQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMV 396
Query: 323 QEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 382
Q+ R + + F+ G R LV TDL RGIDI+ VN+VIN+D P ++++YLHRVGR+GRFG
Sbjct: 397 QDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFG 456
Query: 383 TKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQIDTATY 423
GLA+ V+ D + Q + +IK +P ID A Y
Sbjct: 457 HLGLAVNLVTYE-DRFKMYQTEQELGTEIKPIPSNIDQAIY 496
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 231/391 (59%), Gaps = 14/391 (3%)
Query: 34 TAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGM 93
TA KG + F D+ LK +LLR I + GFE PS +Q E IP A+ G D++ +AK+G
Sbjct: 149 TATKG------NEFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGT 202
Query: 94 GKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN 153
GKT F + +L++IDP + A++L TRELA Q + S YL I+V V GG +
Sbjct: 203 GKTGAFCIPTLEKIDPENNVIQAVILVPTRELALQTSQVCKELSKYL-KIEVMVTTGGTS 261
Query: 154 IKVHKELLKNECP-HIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQ 212
++ ++++ P H++VGTPGRIL L + LK+ ++DE DK+L S++ + ++
Sbjct: 262 LR--DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLL-SVEFQPSIE 318
Query: 213 EIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDS 272
E+ + P +Q++MFSAT ++ ++++ P I + D+ LTL G+ Q+Y +++
Sbjct: 319 ELIQFLPESRQILMFSATFPVTVKSFKDRYLKKPYIINLMDQ--LTLMGVTQYYAFVEER 376
Query: 273 EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKG 332
+K LN L L NQ +IF SV+R L K + E + IH+ M Q+ R + +
Sbjct: 377 QKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHD 436
Query: 333 FKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
F+ G R LV TDL RGIDI+ VN+VIN+D P ++++YLHRVGR+GRFG GLA+ V+
Sbjct: 437 FRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVT 496
Query: 393 SSGDSEVLNQVQSRFEVDIKELPEQIDTATY 423
D + Q + +IK +P ID A Y
Sbjct: 497 YE-DRFKMYQTEQELGTEIKPIPSLIDKAIY 526
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 264 bits (674), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 232/402 (57%), Gaps = 15/402 (3%)
Query: 24 APDSAKPAAE-TAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILG 82
APD+ + TA KG + F D+ LK ELL I + GFE PS +Q E IP A+ G
Sbjct: 115 APDTRYRTEDVTATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTG 168
Query: 83 MDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPD 142
D++ +AK+G GKTA F + L++ID + A+++ TRELA Q + +L
Sbjct: 169 RDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHL-K 227
Query: 143 IKVAVFYGGVNIKVHKELLKNECP-HIVVGTPGRILALTRDKDLGLKNVRHFILDECDKM 201
I+V V GG ++K ++++ P H++VGTPGRIL LT+ LK+ ++DE DK+
Sbjct: 228 IQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKL 285
Query: 202 LESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 261
L S + + V+ + P +Q++MFSAT ++ +F+ +P I + DE LTL G
Sbjct: 286 L-SQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDRFLTNPYVINLMDE--LTLKG 342
Query: 262 LVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 321
+ Q Y +++ +K LN L L NQ +IF SV+R L K + E + IH+ M
Sbjct: 343 ITQFYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM 402
Query: 322 SQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 381
Q+ R + + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYLHRVGR+GRF
Sbjct: 403 LQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRF 462
Query: 382 GTKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQIDTATY 423
G GLA+ ++ D L +++ +IK++P ID A Y
Sbjct: 463 GHLGLAVNLITYE-DRFNLYRIEQELGTEIKQIPPHIDQAIY 503
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 264 bits (674), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 232/402 (57%), Gaps = 15/402 (3%)
Query: 24 APDSAKPAAE-TAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILG 82
APD+ + TA KG + F D+ LK ELL I + GFE PS +Q E IP A+ G
Sbjct: 115 APDTRYRTEDVTATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTG 168
Query: 83 MDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPD 142
D++ +AK+G GKTA F + L++ID + A+++ TRELA Q + +L
Sbjct: 169 RDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHL-K 227
Query: 143 IKVAVFYGGVNIKVHKELLKNECP-HIVVGTPGRILALTRDKDLGLKNVRHFILDECDKM 201
I+V V GG ++K ++++ P H++VGTPGRIL LT+ LK+ ++DE DK+
Sbjct: 228 IQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKL 285
Query: 202 LESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 261
L S + + V+ + P +Q++MFSAT ++ +F+ +P I + DE LTL G
Sbjct: 286 L-SQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDRFLTNPYVINLMDE--LTLKG 342
Query: 262 LVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 321
+ Q Y +++ +K LN L L NQ +IF SV+R L K + E + IH+ M
Sbjct: 343 ITQFYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM 402
Query: 322 SQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 381
Q+ R + + F+ G R LV TDL RGIDI+ VN+VIN+D P +A+TYLHRVGR+GRF
Sbjct: 403 LQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRF 462
Query: 382 GTKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQIDTATY 423
G GLA+ ++ D L +++ +IK++P ID A Y
Sbjct: 463 GHLGLAVNLITYE-DRFNLYRIEQELGTEIKQIPPHIDQAIY 503
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 248 bits (634), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/368 (39%), Positives = 210/368 (57%), Gaps = 6/368 (1%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L+P+LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ+D
Sbjct: 48 LQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISL 107
Query: 112 GQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVG 171
Q ALVL TRELA QI YL +K GG +++ + +L++ H+VVG
Sbjct: 108 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKAQACVGGTSVREDQRVLQSGV-HVVVG 165
Query: 172 TPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATL 231
TPGR+ L R + L ++ F+LDE D+ML S + + +IF+L P QV +FSAT+
Sbjct: 166 TPGRVFDLLRRQSLRADAIKMFVLDEADEML-SRGFKDQIYDIFQLLPSKVQVGVFSATM 224
Query: 232 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE-KNRKLNDLLDALDFNQV 290
E + +KFM P+ I V + +LTL G+ Q Y+ + E K L DL + L Q
Sbjct: 225 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQS 283
Query: 291 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRG 350
VIFV + + L + + H M Q R + F+ G R+L+ TDL+ RG
Sbjct: 284 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 343
Query: 351 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVD 410
ID+++V++VIN+D+P + YLHR+GR+GRFG KG+AI F++S D ++ +Q + V
Sbjct: 344 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSE-DERMMADIQRFYNVV 402
Query: 411 IKELPEQI 418
++ELP +
Sbjct: 403 VEELPSNV 410
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/381 (39%), Positives = 214/381 (56%), Gaps = 7/381 (1%)
Query: 39 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 98
Y +H S F L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA
Sbjct: 34 YDDVHES-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 92
Query: 99 FVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHK 158
F LQQ+D Q ALVL TRELA QI YL +KV GG +++ +
Sbjct: 93 FCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQ 151
Query: 159 ELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLT 218
+L+ H+VVGTPGR+ + + + L N++ F+LDE D+ML S + + +IF+L
Sbjct: 152 RILQAGV-HVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEML-SRGFKDQIYDIFQLL 209
Query: 219 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE-KNRK 277
P QV +FSAT+ E + +KFM P+ I V + +LTL G+ Q Y+ ++ E K
Sbjct: 210 PPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLET 268
Query: 278 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGK 337
L DL + L Q VIFV + + L + + H M Q R + F+ G
Sbjct: 269 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 328
Query: 338 QRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDS 397
R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GRFG KG+AI FV+ D
Sbjct: 329 SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD-DE 387
Query: 398 EVLNQVQSRFEVDIKELPEQI 418
+L +Q + V ++ELP +
Sbjct: 388 RMLFDIQKFYNVVVEELPSNV 408
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 245 bits (626), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 149/381 (39%), Positives = 214/381 (56%), Gaps = 7/381 (1%)
Query: 39 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 98
Y +H S F L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA
Sbjct: 24 YDDVHES-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 82
Query: 99 FVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHK 158
F LQQ+D Q ALVL TRELA QI YL +KV GG +++ +
Sbjct: 83 FCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQ 141
Query: 159 ELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLT 218
+L+ H+VVGTPGR+ + + + L N++ F+LDE D+ML S + + +IF+L
Sbjct: 142 RILQAGV-HVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEML-SRGFKDQIYDIFQLL 199
Query: 219 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE-KNRK 277
P QV +FSAT+ E + +KFM P+ I V + +LTL G+ Q Y+ ++ E K
Sbjct: 200 PPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLET 258
Query: 278 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGK 337
L DL + L Q VIFV + + L + + H M Q R + F+ G
Sbjct: 259 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 318
Query: 338 QRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDS 397
R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GRFG KG+AI FV+ D
Sbjct: 319 SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD-DE 377
Query: 398 EVLNQVQSRFEVDIKELPEQI 418
+L +Q + V ++ELP +
Sbjct: 378 RMLFDIQKFYNVVVEELPSNV 398
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/381 (38%), Positives = 213/381 (55%), Gaps = 12/381 (3%)
Query: 39 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 98
Y +H S F L+ LLR GFE PS +Q I G+DVI QA+SG GKTA
Sbjct: 34 YDDVHES-FDAMGLQENLLR-----GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 87
Query: 99 FVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHK 158
F LQQ+D Q ALVL TRELA QI YL +KV GG +++ +
Sbjct: 88 FCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQ 146
Query: 159 ELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLT 218
+L+ H+VVGTPGR+ + + + L N++ F+LDE D+ML S + + +IF+L
Sbjct: 147 RILQAGV-HVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEML-SRGFKDQIYDIFQLL 204
Query: 219 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE-KNRK 277
P QV +FSAT+ E + +KFM P+ I V + +LTL G+ Q Y+ ++ E K
Sbjct: 205 PPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLET 263
Query: 278 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGK 337
L DL + L Q VIFV + + L + + H M Q R + F+ G
Sbjct: 264 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 323
Query: 338 QRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDS 397
R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GRFG KG+AI FV+ D
Sbjct: 324 SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD-DE 382
Query: 398 EVLNQVQSRFEVDIKELPEQI 418
+L +Q + V ++ELP +
Sbjct: 383 RMLFDIQKFYNVVVEELPSNV 403
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 147/381 (38%), Positives = 212/381 (55%), Gaps = 7/381 (1%)
Query: 39 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 98
Y +H S F L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA
Sbjct: 34 YDEVHES-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 92
Query: 99 FVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHK 158
F LQQ+D Q ALVL TRELA QI Y +KV GG +++ +
Sbjct: 93 FCSGVLQQLDYALLQCQALVLAPTRELAQQIEKVMRALGDY-QGVKVHACVGGTSVREDQ 151
Query: 159 ELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLT 218
+L+ H+VVGTPGR+ + R + L ++ F+LDE D+ML S + + +IF+L
Sbjct: 152 RILQAGV-HVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEML-SRGFKDQIYDIFQLL 209
Query: 219 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE-KNRK 277
P QV +FSAT+ E + +KFM P+ I V + +LTL G+ Q Y+ ++ + K
Sbjct: 210 PPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRD-ELTLEGIKQFYVNVEKEDWKLET 268
Query: 278 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGK 337
L DL + L Q VIFV + + L + + H M Q R + F+ G
Sbjct: 269 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 328
Query: 338 QRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDS 397
R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GRFG KG+AI FV+ D
Sbjct: 329 SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLD-DQ 387
Query: 398 EVLNQVQSRFEVDIKELPEQI 418
+L +Q + V ++ELP +
Sbjct: 388 RMLFDIQKFYNVVVEELPSNV 408
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/355 (40%), Positives = 201/355 (56%), Gaps = 6/355 (1%)
Query: 39 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 98
Y +H S F L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA
Sbjct: 34 YDDVHES-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 92
Query: 99 FVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHK 158
F LQQ+D Q ALVL TRELA QI YL +KV GG +++ +
Sbjct: 93 FCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQ 151
Query: 159 ELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLT 218
+L+ H+VVGTPGR+ + + + L N++ F+LDE D+ML S + + +IF+L
Sbjct: 152 RILQAGV-HVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEML-SRGFKDQIYDIFQLL 209
Query: 219 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE-KNRK 277
P QV +FSAT+ E + +KFM P+ I V + +LTL G+ Q Y+ ++ E K
Sbjct: 210 PPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLET 268
Query: 278 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGK 337
L DL + L Q VIFV + + L + + H M Q R + F+ G
Sbjct: 269 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 328
Query: 338 QRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GRFG KG+AI FV+
Sbjct: 329 SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVT 383
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 215/375 (57%), Gaps = 6/375 (1%)
Query: 45 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSL 104
+ F D +K ++LR + + GFE PS +Q + + G DVI QA+SG GKT++ LS
Sbjct: 35 TSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVC 94
Query: 105 QQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNE 164
Q +D +V AL+L TRELA Q + + +I+ GG ++ L++
Sbjct: 95 QVVDTSSREVQALILSPTRELATQTEKTIQAIGLH-ANIQAHACIGGNSVGEDIRKLEHG 153
Query: 165 CPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQV 224
H+V GTPGR+ + + + L + ++ ILDE D+ML S + + ++++ P D QV
Sbjct: 154 V-HVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEML-SRGFKDQIYDVYRYLPPDLQV 211
Query: 225 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE-KNRKLNDLLD 283
+ SATL EI + KFM +P++I V + +LTL G+ Q ++ ++ E K L DL D
Sbjct: 212 CLVSATLPHEILEMTSKFMTEPVKILVKRD-ELTLEGIKQFFVAVEKEEWKFDTLCDLYD 270
Query: 284 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVA 343
L Q VIF + + L++ + NF +H M Q+ER F+ G R+L+
Sbjct: 271 TLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLIT 330
Query: 344 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQV 403
TD+ RGID+++V++VINYD+P++ + Y+HR+GR+GRFG KG+AI FV S D ++L +
Sbjct: 331 TDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSD-DIKILRDI 389
Query: 404 QSRFEVDIKELPEQI 418
+ + I E+P +
Sbjct: 390 EQYYSTQIDEMPMNV 404
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/381 (38%), Positives = 211/381 (55%), Gaps = 12/381 (3%)
Query: 39 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 98
Y +H S F L+ LLR GFE PS +Q I G+DVI QA+SG GKTA
Sbjct: 34 YDEVHES-FDAMGLQENLLR-----GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAT 87
Query: 99 FVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHK 158
F LQQ+D Q ALVL TRELA QI Y +KV GG +++ +
Sbjct: 88 FCSGVLQQLDYALLQCQALVLAPTRELAQQIEKVMRALGDY-QGVKVHACVGGTSVREDQ 146
Query: 159 ELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLT 218
+L+ H+VVGTPGR+ + R + L ++ F+LDE D+ML S + + +IF+L
Sbjct: 147 RILQAGV-HVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEML-SRGFKDQIYDIFQLL 204
Query: 219 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE-KNRK 277
P QV +FSAT+ E + +KFM P+ I V + +LTL G+ Q Y+ ++ + K
Sbjct: 205 PPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRD-ELTLEGIKQFYVNVEKEDWKLET 263
Query: 278 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGK 337
L DL + L Q VIFV + + L + + H M Q R + F+ G
Sbjct: 264 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 323
Query: 338 QRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDS 397
R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GRFG KG+AI FV+ D
Sbjct: 324 SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLD-DQ 382
Query: 398 EVLNQVQSRFEVDIKELPEQI 418
+L +Q + V ++ELP +
Sbjct: 383 RMLFDIQKFYNVVVEELPSNV 403
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 228 bits (582), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 134/370 (36%), Positives = 211/370 (57%), Gaps = 6/370 (1%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F D + ++LR + D G++ PSE+Q + + G DVI QA+SG GKT++ +S Q
Sbjct: 24 FDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQI 83
Query: 107 IDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECP 166
++ +V LVL +RELA Q + + +I+ GG +I + L+
Sbjct: 84 VNISSRKVQVLVLSPSRELASQTEKTIQAIGAH-TNIQAHACIGGKSIGEDIKKLERGV- 141
Query: 167 HIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMM 226
H V GTPGR+ + + L K V+ +LDE D+ML S ++ + ++++ PHD QV +
Sbjct: 142 HAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEML-SKGLKDQIYDVYRALPHDIQVCL 200
Query: 227 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE-KNRKLNDLLDAL 285
SATL +EI + +KFM DP+ I V + +LTL G+ Q+Y+ + E K L DL L
Sbjct: 201 ISATLPQEILEMTEKFMTDPVRILVKPD-ELTLEGIKQYYVDVDKEEWKFDTLCDLYGRL 259
Query: 286 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATD 345
NQ +IF + + L + + NF +H Q+ER F+ K R+L+A+D
Sbjct: 260 TINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASD 319
Query: 346 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQS 405
+ RGID++ V+ VINYD+P++ + Y+HR+GRAGRFG +G+AI FV SS D + L ++
Sbjct: 320 VWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSS-DMKDLKDIER 378
Query: 406 RFEVDIKELP 415
+ I+E+P
Sbjct: 379 HYGTKIREMP 388
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 214/391 (54%), Gaps = 25/391 (6%)
Query: 44 SSGFRDFLLKPELLRAI-VDSGFEHPSEVQHECIPQAILG--MDVICQAKSGMGKTAVFV 100
+S F D L PEL++ + V+ FE PS++Q +P + +I QA +G GKT FV
Sbjct: 90 ASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFV 149
Query: 101 LSSLQQIDPVPGQVAALVLCHTRELAYQ---ICHEFERFSTYLPDIKVAVFYGGVNIKVH 157
L L ++DP + AL +C TRELA Q + + +F+ ++ V G
Sbjct: 150 LGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKFTGITAELAVPDSTRGAPAATR 209
Query: 158 KELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRD----VQE 213
+ H+V+GTPG + K LGL +++ + DE D ML + R D +++
Sbjct: 210 GAPV---SAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKIMKD 266
Query: 214 IFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE 273
I ++ P + QV++FSAT ++ ++ + ++DP +++V E L L + Q+ + +
Sbjct: 267 IGRVNP-NFQVLLFSATFNETVKDFVARTVKDPNQLFVKRE-DLALDSVKQYKVVCPKEQ 324
Query: 274 KNRKL--NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYK 331
++ + +++ D Q +IFVK+ + A +++K L E + +H +++ +R K K
Sbjct: 325 NKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTESDRDKIVK 384
Query: 332 GFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADT-------YLHRVGRAGRFGTK 384
FKE ++L+ATD++ RG D +RVN+V+NY++P +T YLHRVGRAGRFG K
Sbjct: 385 EFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGRAGRFGRK 444
Query: 385 GLAITFVSSSG-DSEVLNQVQSRFEVDIKEL 414
G + G D EV+ +++ FE ++KE+
Sbjct: 445 GAVFNLLLDDGWDKEVMEKIEKYFEANVKEI 475
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 189/356 (53%), Gaps = 17/356 (4%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
FRD +L + +GF P+ +Q + P A+ G D+I A++G GKT ++L ++
Sbjct: 101 FRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVH 160
Query: 107 IDPVP------GQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKEL 160
++ P G + LVL TRELA QI E +F + IK YGGV
Sbjct: 161 VNAQPMLAHGDGPIV-LVLAPTRELAVQIQQEASKFGSS-SKIKTTCIYGGVPKGPQVRD 218
Query: 161 LKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPH 220
L+ IV+ TPGR++ + + L+ V + +LDE D+ML DM D Q I K+ H
Sbjct: 219 LQKGV-EIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRML---DMGFDPQ-IRKIVSH 273
Query: 221 ---DKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRK 277
D+Q + +SAT KE+ + KKF+ +P ++ + + Q + +S+K K
Sbjct: 274 IRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNK 333
Query: 278 LNDLL-DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEG 336
L LL D +D +++++F+ + ++ + L +P++ IH SQ ER F+ G
Sbjct: 334 LVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSG 393
Query: 337 KQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
K I+ ATD+ RG+D++ V VINYD P S + Y+HR+GR GR G KG A TF +
Sbjct: 394 KSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT 449
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 217/402 (53%), Gaps = 14/402 (3%)
Query: 25 PDSAKPAAETAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMD 84
P+ A P + V H+ F + L LLRA G++ P+ +Q CIP A+ G D
Sbjct: 147 PEDATPKPFFSTVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRD 206
Query: 85 VICQAKSGMGKTAVFVLSSLQQIDPVPGQVAA---LVLCHTRELAYQICHEFERFSTYLP 141
+ A +G GKTA F L +L+++ P +V A L+L TRELA QI + + +
Sbjct: 207 LCASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFT- 265
Query: 142 DIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDK-DLGLKNVRHFILDECDK 200
DIK + GG++++ +E++ P IVV TPGR++ R+ + L ++ ILDE D+
Sbjct: 266 DIKCGLIVGGLSVR-EQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADR 324
Query: 201 MLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 260
+L++ ++ E+ +L P +Q M+FSAT+++E++ + K + P+ + D A+
Sbjct: 325 LLQT-GFATEITELVRLCPKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRP-P 382
Query: 261 GLVQHYIKLQDS-EKNRK--LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 317
GL + ++++ + E N++ L L ++V+IF + A L L + +
Sbjct: 383 GLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAEL 442
Query: 318 HSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 377
H ++Q +RL + F++ + L+ATD+ RG+DI V VINY P D+Y+HRVGR
Sbjct: 443 HGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGR 502
Query: 378 AGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKE--LPEQ 417
R G +G A+TFV+ S D +L + + +K +PEQ
Sbjct: 503 TARAGREGYAVTFVTDS-DRSLLKVIAKKVGSKLKSRVIPEQ 543
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 210/388 (54%), Gaps = 31/388 (7%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F + ++ EL++A G+++PS++Q E +P A+ G DVI A++G GKT F + LQ
Sbjct: 11 FAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQA 70
Query: 107 I-------DPVPGQ-----VAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNI 154
+ +P G+ A VL TRELA QI +FE + ++ AV GG++
Sbjct: 71 LLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADI-SLRCAVLVGGID- 128
Query: 155 KVHKELLKNECPHIVVGTPGRILALTRD-KDLGLKNVRHFILDECDKMLESLDMRRDVQE 213
++ + + + PH++V TPGR+ D K LK++++ +LDE D++L D + + +
Sbjct: 129 RMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNE-DFEKSLNQ 187
Query: 214 IFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE 273
I + P +++ +FSAT++K++R + + +++P++I + T+ L Q Y +
Sbjct: 188 ILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYS-TVDTLKQQYRFVAAKY 246
Query: 274 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGF 333
K+ L +L + + +IF ++ L +L F +I I M+Q +RL F
Sbjct: 247 KDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKF 306
Query: 334 KEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 393
K G+ ILV TD+ RG+DI V++VINYD+P ++ Y+HRVGR R G G+ I+ V
Sbjct: 307 KAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLV-- 364
Query: 394 SGDSEVLNQVQSRFEVDI-----KELPE 416
NQ + + + I K+LPE
Sbjct: 365 -------NQYELEWYIQIEKLIGKKLPE 385
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 190/374 (50%), Gaps = 30/374 (8%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L ELL+A+ +G++ PS +Q IP + DVI A++G GKTA FVL L I +P
Sbjct: 320 LTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLP 379
Query: 112 GQVA--------ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKN 163
A+V+ TRELA QI E +F+ YL +V GG +I+ +
Sbjct: 380 PMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYL-GFRVTSIVGGQSIEEQGLKITQ 438
Query: 164 ECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHD-- 221
C IV+ TPGR++ + L + +LDE D+M++ + V + P
Sbjct: 439 GC-EIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMID-MGFEPQVAGVLDAMPSSNL 496
Query: 222 ---------------KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY 266
+ MFSAT+ + + +K++++P+ + + K T + QH
Sbjct: 497 KPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTT-DLISQHV 555
Query: 267 IKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEER 326
I +++SEK +L LLD L ++FV + + K L + + +H G SQE+R
Sbjct: 556 IMMKESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQR 615
Query: 327 LKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 386
+GF+ + +LVATD+VGRGIDI V VINYDMP + Y HR+GR GR G G+
Sbjct: 616 EISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGV 675
Query: 387 AITFVSSSGDSEVL 400
A +F++ D+EV
Sbjct: 676 ATSFLTLH-DTEVF 688
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 192/354 (54%), Gaps = 13/354 (3%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F+D +L AI GF P+ +Q + P A+ G D+I A++G GKT ++L +L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 107 IDPVP--GQ---VAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELL 161
+ P GQ L+L TRELA QI E +F ++ YGG L
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFG-LRSGVRSTCIYGGAPKGPQIRDL 285
Query: 162 KNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHD 221
+ IV+ TPGR++ + + LK V + +LDE D+ML+ + +++I D
Sbjct: 286 RRGV-EIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLD-MGFEPQIRKIVSQIRPD 343
Query: 222 KQVMMFSATLSKEIRPVCKKFMQDPMEIYV---DDEAKLTLHGLVQHYIKLQDSEKNRKL 278
+Q +++SAT +E+ + ++F++DP + + D +A +++ +++ I + NR L
Sbjct: 344 RQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIE--IVPTPEKYNRLL 401
Query: 279 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQ 338
L +D ++++IFV++ ++ + L +P++ IH +Q ER + FK G+
Sbjct: 402 TLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRS 461
Query: 339 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
I+ ATD+ RG+D++ + V+NYD P++ + Y+HR+GR GR G KG+A TF +
Sbjct: 462 PIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFT 515
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 206/411 (50%), Gaps = 25/411 (6%)
Query: 27 SAKPAAETAKKGYVGIH----SSG--------FRDFLLKPELLRAIVDSGFEHPSEVQHE 74
S+ PA+E + + Y H S G F PELLR ++ +GF P+ +Q +
Sbjct: 128 SSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQ 187
Query: 75 CIPQAILGMDVICQAKSGMGKTAVFVLSS---LQQI--DPVPGQVAALVLCHTRELAYQI 129
P A+ G D++ AK+G GKT +++ LQ+I D G LVL TRELA QI
Sbjct: 188 SWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTI-LVLSPTRELATQI 246
Query: 130 CHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKN 189
E +F I YGG L+ IVV TPGR+ + + + L+
Sbjct: 247 QEEAVKFGRSS-RISCTCLYGGAPKGPQLRDLERGA-DIVVATPGRLNDILEMRRISLRQ 304
Query: 190 VRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 249
+ + +LDE D+ML+ + +++I K P +Q +M++AT K +R + + +P ++
Sbjct: 305 ISYLVLDEADRMLD-MGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQV 363
Query: 250 YVDDEAKLTLH-GLVQHYIKLQDSEKNRKLNDLLDALD-FNQVVIFVKSVSRAAELNKLL 307
+ + +L + + QH + EK R+L +L + + ++V+IF + +L + L
Sbjct: 364 NIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNL 423
Query: 308 VECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDS 367
F + IH SQ ER F+ G+ +LVATD+ RG+D++ + V+NYD P+
Sbjct: 424 TR-QFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNG 482
Query: 368 ADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQI 418
+ Y+HR+GR GR G G A TF DS+ + + E + +P QI
Sbjct: 483 VEDYVHRIGRTGRAGATGQAFTFFGDQ-DSKHASDLIKILEGANQRVPPQI 532
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 206/411 (50%), Gaps = 25/411 (6%)
Query: 27 SAKPAAETAKKGYVGIH----SSG--------FRDFLLKPELLRAIVDSGFEHPSEVQHE 74
S+ PA+E + + Y H S G F PELLR ++ +GF P+ +Q +
Sbjct: 128 SSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQ 187
Query: 75 CIPQAILGMDVICQAKSGMGKTAVFVLSS---LQQI--DPVPGQVAALVLCHTRELAYQI 129
P A+ G D++ AK+G GKT +++ LQ+I D G LVL TRELA QI
Sbjct: 188 SWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTI-LVLSPTRELATQI 246
Query: 130 CHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKN 189
E +F I YGG L+ IVV TPGR+ + + + L+
Sbjct: 247 QEEAVKFGRSS-RISCTCLYGGAPKGPQLRDLERGA-DIVVATPGRLNDILEMRRISLRQ 304
Query: 190 VRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 249
+ + +LDE D+ML+ + +++I K P +Q +M++AT K +R + + +P ++
Sbjct: 305 ISYLVLDEADRMLD-MGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQV 363
Query: 250 YVDDEAKLTLH-GLVQHYIKLQDSEKNRKLNDLLDALD-FNQVVIFVKSVSRAAELNKLL 307
+ + +L + + QH + EK R+L +L + + ++V+IF + +L + L
Sbjct: 364 NIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNL 423
Query: 308 VECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDS 367
F + IH SQ ER F+ G+ +LVATD+ RG+D++ + V+NYD P+
Sbjct: 424 TR-QFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNG 482
Query: 368 ADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQI 418
+ Y+HR+GR GR G G A TF DS+ + + E + +P QI
Sbjct: 483 VEDYVHRIGRTGRAGATGQAFTFFGDQ-DSKHASDLIKILEGANQRVPPQI 532
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 206/411 (50%), Gaps = 25/411 (6%)
Query: 27 SAKPAAETAKKGYVGIH----SSG--------FRDFLLKPELLRAIVDSGFEHPSEVQHE 74
S+ PA+E + + Y H S G F PELLR ++ +GF P+ +Q +
Sbjct: 128 SSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQ 187
Query: 75 CIPQAILGMDVICQAKSGMGKTAVFVLSS---LQQI--DPVPGQVAALVLCHTRELAYQI 129
P A+ G D++ AK+G GKT +++ LQ+I D G LVL TRELA QI
Sbjct: 188 SWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTI-LVLSPTRELATQI 246
Query: 130 CHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKN 189
E +F I YGG L+ IVV TPGR+ + + + L+
Sbjct: 247 QEEAVKFGRSS-RISCTCLYGGAPKGPQLRDLERGA-DIVVATPGRLNDILEMRRISLRQ 304
Query: 190 VRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 249
+ + +LDE D+ML+ + +++I K P +Q +M++AT K +R + + +P ++
Sbjct: 305 ISYLVLDEADRMLD-MGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQV 363
Query: 250 YVDDEAKLTLH-GLVQHYIKLQDSEKNRKLNDLLDALD-FNQVVIFVKSVSRAAELNKLL 307
+ + +L + + QH + EK R+L +L + + ++V+IF + +L + L
Sbjct: 364 NIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNL 423
Query: 308 VECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDS 367
F + IH SQ ER F+ G+ +LVATD+ RG+D++ + V+NYD P+
Sbjct: 424 TR-QFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNG 482
Query: 368 ADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQI 418
+ Y+HR+GR GR G G A TF DS+ + + E + +P QI
Sbjct: 483 VEDYVHRIGRTGRAGATGQAFTFFGDQ-DSKHASDLIKILEGANQRVPPQI 532
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 206/411 (50%), Gaps = 25/411 (6%)
Query: 27 SAKPAAETAKKGYVGIH----SSG--------FRDFLLKPELLRAIVDSGFEHPSEVQHE 74
S+ PA+E + + Y H S G F PELLR ++ +GF P+ +Q +
Sbjct: 128 SSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQ 187
Query: 75 CIPQAILGMDVICQAKSGMGKTAVFVLSS---LQQI--DPVPGQVAALVLCHTRELAYQI 129
P A+ G D++ AK+G GKT +++ LQ+I D G LVL TRELA QI
Sbjct: 188 SWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTI-LVLSPTRELATQI 246
Query: 130 CHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKN 189
E +F I YGG L+ IVV TPGR+ + + + L+
Sbjct: 247 QEEAVKFGRSS-RISCTCLYGGAPKGPQLRDLERGA-DIVVATPGRLNDILEMRRISLRQ 304
Query: 190 VRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI 249
+ + +LDE D+ML+ + +++I K P +Q +M++AT K +R + + +P ++
Sbjct: 305 ISYLVLDEADRMLD-MGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQV 363
Query: 250 YVDDEAKLTLH-GLVQHYIKLQDSEKNRKLNDLLDALD-FNQVVIFVKSVSRAAELNKLL 307
+ + +L + + QH + EK R+L +L + + ++V+IF + +L + L
Sbjct: 364 NIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNL 423
Query: 308 VECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDS 367
F + IH SQ ER F+ G+ +LVATD+ RG+D++ + V+NYD P+
Sbjct: 424 TR-QFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNG 482
Query: 368 ADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQI 418
+ Y+HR+GR GR G G A TF DS+ + + E + +P QI
Sbjct: 483 VEDYVHRIGRTGRAGATGQAFTFFGDQ-DSKHASDLIKILEGANQRVPPQI 532
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 191/347 (55%), Gaps = 11/347 (3%)
Query: 64 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLCHTR 123
G P+ VQ C+P+ + G DV+ A++G GKTA F L L ++ P V ALV+ TR
Sbjct: 77 GMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPYGVFALVVTPTR 136
Query: 124 ELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRI-LALTRD 182
ELA+Q+ +F+ + L +++ +V GG+++ L + PHIV+ TPGRI + L +
Sbjct: 137 ELAFQLAEQFKALGSCL-NLRCSVIVGGMDMLTQTMSLVSR-PHIVITTPGRIKVLLENN 194
Query: 183 KDLG--LKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCK 240
D+ + +LDE D++L+ + + +++ IF+ P +Q ++FSAT++ ++ + +
Sbjct: 195 PDVPPVFSRTKFLVLDEADRVLD-VGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLE 253
Query: 241 KFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALD---FNQVVIFVKSV 297
+ Y E T+ L Q +I K L +L ++ +IFV +
Sbjct: 254 -HSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTC 312
Query: 298 SRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVN 357
L+ +L E +I +HS SQ RL FK GK IL+ATD+ RG+DI V+
Sbjct: 313 RTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVD 372
Query: 358 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQ 404
+VINYD+P Y+HRVGR R G GLA++ ++ + D +++++++
Sbjct: 373 LVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITET-DVKLIHKIE 418
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 180/342 (52%), Gaps = 16/342 (4%)
Query: 64 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAA------- 116
G H +Q + A+ G D+I +AK+G GKT F + ++++ G A
Sbjct: 121 GITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRL 180
Query: 117 ---LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTP 173
LVL TRELA Q+ E + + YL + V YGGV+ + + L +VVGTP
Sbjct: 181 PKFLVLAPTRELAKQVEKEIKESAPYLSTVCV---YGGVSYTIQQSALTRGV-DVVVGTP 236
Query: 174 GRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSK 233
GRI+ L + L L V + +LDE D+ML ++ V+ I + P +Q M+FSAT+
Sbjct: 237 GRIIDLIEGRSLKLGEVEYLVLDEADQML-AVGFEEAVESILENLPTKRQSMLFSATMPT 295
Query: 234 EIRPVCKKFMQDPMEI-YVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDFNQVVI 292
++ + +K++ +P+ I V D+ + G+ + I + K L+DL+ I
Sbjct: 296 WVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTI 355
Query: 293 FVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGID 352
R A+ L + + + +H +SQ +R + F++GK +LVATD+ RG+D
Sbjct: 356 VFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLD 415
Query: 353 IERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSS 394
I V++VI+Y++P+ +T++HR GR GR G +G AI +SS
Sbjct: 416 IPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSS 457
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 180/342 (52%), Gaps = 16/342 (4%)
Query: 64 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAA------- 116
G H +Q + A+ G D+I +AK+G GKT F + ++++ G A
Sbjct: 121 GITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRL 180
Query: 117 ---LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTP 173
LVL TRELA Q+ E + + YL + V YGGV+ + + L +VVGTP
Sbjct: 181 PKFLVLAPTRELAKQVEKEIKESAPYLSTVCV---YGGVSYTIQQSALTRGV-DVVVGTP 236
Query: 174 GRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSK 233
GRI+ L + L L V + +LDE D+ML ++ V+ I + P +Q M+FSAT+
Sbjct: 237 GRIIDLIEGRSLKLGEVEYLVLDEADQML-AVGFEEAVESILENLPTKRQSMLFSATMPT 295
Query: 234 EIRPVCKKFMQDPMEI-YVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDFNQVVI 292
++ + +K++ +P+ I V D+ + G+ + I + K L+DL+ I
Sbjct: 296 WVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTI 355
Query: 293 FVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGID 352
R A+ L + + + +H +SQ +R + F++GK +LVATD+ RG+D
Sbjct: 356 VFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLD 415
Query: 353 IERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSS 394
I V++VI+Y++P+ +T++HR GR GR G +G AI +SS
Sbjct: 416 IPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSS 457
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 185/368 (50%), Gaps = 17/368 (4%)
Query: 32 AETAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKS 91
E Y+ SSG L PE+LR ++ +GF P+ +Q + P A+ D++ AK+
Sbjct: 427 GENIPAPYITFESSG-----LPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKT 481
Query: 92 GMGKT-----AVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVA 146
G GKT F+L + D G L+L TRELA QI E RF I
Sbjct: 482 GSGKTLGYLIPAFILLRHCRNDSRNGPTV-LILAPTRELATQIQDEALRFGRSS-RISCT 539
Query: 147 VFYGGVNIKVH-KELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESL 205
YGG KEL + IVV TPGR+ + K + + V +LDE D+ML+ +
Sbjct: 540 CLYGGAPKGPQLKELERGA--DIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLD-M 596
Query: 206 DMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQH 265
+++I P +Q +M++AT KE+R + + +P+++ + +L + +
Sbjct: 597 GFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQ 656
Query: 266 YIKL-QDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQE 324
Y+++ EK R+L +L + + VI S R + V +F ++ IH +Q
Sbjct: 657 YVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVGRHFGAVVIHGDKTQG 716
Query: 325 ERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK 384
ER F+ GK +L+ATD+ RG+DI+ + +VINYD P + Y+HR+GR GR G
Sbjct: 717 ERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGAT 776
Query: 385 GLAITFVS 392
G+A TF +
Sbjct: 777 GVAFTFFT 784
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 188/355 (52%), Gaps = 14/355 (3%)
Query: 44 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSS 103
++GF +L+ P R + +GF PS +Q + P A+ D++ AK+G GKT +++
Sbjct: 228 AAGFNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPG 287
Query: 104 ---LQQI--DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVH- 157
LQ+I D G LVL TRELA QI E +F I A YGG
Sbjct: 288 FMHLQRIHNDSRMGPTI-LVLSPTRELATQIQVEALKFGKSS-KISCACLYGGAPKGPQL 345
Query: 158 KELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKL 217
KE+ + IVV TPGR+ + K + L V + +LDE D+ML+ + +++I
Sbjct: 346 KEIERGV--DIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLD-MGFEPQIRKIVNE 402
Query: 218 TPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK-LQDSEKNR 276
P +Q +M++AT KE+R + + +P ++ + + +L + + I+ L EK+
Sbjct: 403 VPTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHS 462
Query: 277 KLNDLLDALD-FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKE 335
+L +L + + ++++IF + +L + L F + IH SQ ER F+
Sbjct: 463 RLEQILRSQEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRS 521
Query: 336 GKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 390
G+ +LVATD+ RG+D++ + +V+NYD P+ + Y+HR+GR GR G GLA TF
Sbjct: 522 GRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTF 576
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 180/345 (52%), Gaps = 23/345 (6%)
Query: 68 PSEVQHECIPQAILGMDVICQAKSGMGKTAVF---VLSSL---QQIDPVPGQVA----AL 117
P+ VQ IP G D++ A++G GKTA F ++S + Q I+ G A+
Sbjct: 169 PTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAV 228
Query: 118 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRIL 177
+L TRELA QI E +FS Y +KV V YGG + L+ I+V TPGR+
Sbjct: 229 ILSPTRELACQIHDEARKFS-YQTGVKVVVAYGGTPVNQQIRELERGV-DILVATPGRLN 286
Query: 178 ALTRDKDLGLKNVRHFILDECDKMLE---SLDMRRDVQEIFKLTPHDKQVMMFSATLSKE 234
L + L+ VR LDE D+ML+ +R+ VQ++ P +Q M+FSAT +E
Sbjct: 287 DLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPRE 346
Query: 235 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDAL--DFNQ--- 289
I+ + F+ + + + V T +VQ + DS+K L DLL A + NQ
Sbjct: 347 IQRLASDFLSNYIFLAVGRVGSST-DLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQ 405
Query: 290 --VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLV 347
++FV++ A L L FP+ IH SQ+ER + FK G+ ILVATD+
Sbjct: 406 ALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVA 465
Query: 348 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
RG+DI V V+N+D+P+ D Y+HR+GR GR G GLA F +
Sbjct: 466 ARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFN 510
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 185/352 (52%), Gaps = 14/352 (3%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSS--- 103
F L ELLR + +GF PS +Q + P A+ D++ AK+G GKT +++
Sbjct: 163 FEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMH 222
Query: 104 LQQI--DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVH-KEL 160
LQ+I D G LVL TRELA QI E +F I A YGG KE+
Sbjct: 223 LQRIHNDSRMGPTI-LVLSPTRELATQIQVEALKFGKSS-KISCACLYGGAPKGPQLKEI 280
Query: 161 LKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPH 220
+ IVV TPGR+ + K + L V + +LDE D+ML+ + +++I P
Sbjct: 281 ERGV--DIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLD-MGFEPQIRKIVNEVPT 337
Query: 221 DKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK-LQDSEKNRKLN 279
+Q +M++AT KE+R + + +P ++ + + +L + + I+ L EK+ +L
Sbjct: 338 KRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLE 397
Query: 280 DLLDALD-FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQ 338
+L + + ++++IF + +L + L F + IH SQ ER F+ G+
Sbjct: 398 QILRSQEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRT 456
Query: 339 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 390
+LVATD+ RG+D++ + +V+NYD P+ + Y+HR+GR GR G GLA TF
Sbjct: 457 PVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTF 508
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 175/327 (53%), Gaps = 16/327 (4%)
Query: 79 AILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAA----------LVLCHTRELAYQ 128
A+ G D+I +AK+G GKT F + ++++ G A LVL TRELA Q
Sbjct: 43 ALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQ 102
Query: 129 ICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLK 188
+ E + + YL + V YGGV+ + + L +VVGTPGRI+ L + L L
Sbjct: 103 VEKEIKESAPYLSTVCV---YGGVSYTIQQSALTRGV-DVVVGTPGRIIDLIEGRSLKLG 158
Query: 189 NVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPME 248
V + +LDE D+ML ++ V+ I + P +Q M+FSAT+ ++ + +K++ +P+
Sbjct: 159 EVEYLVLDEADQML-AVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLN 217
Query: 249 I-YVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL 307
I V D+ + G+ + I + K L+DL+ I R A+ L
Sbjct: 218 IDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLA 277
Query: 308 VECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDS 367
+ + + +H +SQ +R + F++GK +LVATD+ RG+DI V++VI+Y++P+
Sbjct: 278 LSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPND 337
Query: 368 ADTYLHRVGRAGRFGTKGLAITFVSSS 394
+T++HR GR GR G +G AI +SS
Sbjct: 338 PETFVHRSGRTGRAGKEGSAILMHTSS 364
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 184/375 (49%), Gaps = 13/375 (3%)
Query: 49 DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQID 108
D + PE+++A+ G E +Q + A+ G D+I +A++G GKT F + + +I
Sbjct: 120 DLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 179
Query: 109 PVPGQVA------ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLK 162
+ LVL TRELA Q+ EF + P + YGG I L
Sbjct: 180 KFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESA---PSLDTICLYGGTPIGQQMREL- 235
Query: 163 NECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDK 222
N + VGTPGRI+ L + L L V+ +LDE D+ML+ + DV+ I + P +
Sbjct: 236 NYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQ-VGFAEDVEIILQKLPAKR 294
Query: 223 QVMMFSATLSKEIRPVCKKFMQDPMEI-YVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDL 281
Q MMFSAT+ IR + KK++ +P+ I V D + G+ + I + + L
Sbjct: 295 QSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPL 354
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
+ I R A+ + ++ +H +SQ +R + GF++G IL
Sbjct: 355 VKEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSIL 414
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLN 401
VATD+ RG+D+ V++VI+Y++P++ +T++HR GR GR G KG AI + + +
Sbjct: 415 VATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAI-LIHGQDQTRAVK 473
Query: 402 QVQSRFEVDIKELPE 416
++ ELP
Sbjct: 474 MIEKEVGSRFNELPS 488
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 191/375 (50%), Gaps = 21/375 (5%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
+ PE+++A+ G E +Q + A+ G D+I +A++G GKT F + + +I
Sbjct: 111 ISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYN 170
Query: 112 GQVA------ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNEC 165
+ LVL TRELA Q+ EF + P + YGG I L +
Sbjct: 171 AKHGRGRNPLCLVLAPTRELARQVEKEFRESA---PSLDTICLYGGTPIGQQMRQL-DYG 226
Query: 166 PHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVM 225
+ VGTPGR++ L + L L V+ +LDE D+ML+ + DV+ I + P +Q M
Sbjct: 227 VDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQ-VGFAEDVEIILEKLPEKRQSM 285
Query: 226 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLL--D 283
MFSAT+ IR + KK++ +P+ + + ++ L + Y + DS + L +
Sbjct: 286 MFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLVTE 345
Query: 284 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVA 343
+ ++F ++ A L+ L +F +H +SQ +R + GF++G ILVA
Sbjct: 346 HAKGGKCIVFTQTKRDADRLSYALAR-SFKCEALHGDISQSQRERTLAGFRDGHFNILVA 404
Query: 344 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVL--- 400
TD+ RG+D+ V+++I+Y++P++ +T++HR GR GR G KG AI S V
Sbjct: 405 TDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIE 464
Query: 401 NQVQSRFEVDIKELP 415
+V SRF ELP
Sbjct: 465 REVGSRF----TELP 475
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 190/374 (50%), Gaps = 30/374 (8%)
Query: 68 PSEVQHECIPQAILGMDVICQAKSGMGKTAVF---VLSSL---QQIDPVPGQVA----AL 117
P+ VQ IP + G D++ A++G GKTA F ++S + Q + G A+
Sbjct: 182 PTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAV 241
Query: 118 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRIL 177
+L TRELA QI E ++FS Y +KV V YGG I L+ I+V TPGR+
Sbjct: 242 ILSPTRELASQIHDEAKKFS-YQTGVKVVVAYGGTPINQQLRELERGV-DILVATPGRLN 299
Query: 178 ALTRDKDLGLKNVRHFILDECDKMLESLDMR-----RDVQEIFKLTPHD-KQVMMFSATL 231
L + ++ +R LDE D+ML DM R + E + P +Q ++FSAT
Sbjct: 300 DLLERARVSMQMIRFLALDEADRML---DMGFEPQIRKIVEQMDMPPRGVRQTLLFSATF 356
Query: 232 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDFNQV- 290
+EI+ + F+ + + + V T +VQ + DS+K L DLL A N +
Sbjct: 357 PREIQRLAADFLANYIFLAVGRVGSST-DLIVQRVEFVLDSDKRSHLMDLLHAQRENGIQ 415
Query: 291 ------VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVAT 344
++FV++ A L L FP+ IH +Q+ER K FK G+ ILVAT
Sbjct: 416 GKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVAT 475
Query: 345 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQ 404
D+ RG+DI V V+N+D+P+ D Y+HR+GR GR G GLA F + G++ + +
Sbjct: 476 DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFF-NDGNTSLARPLA 534
Query: 405 SRFEVDIKELPEQI 418
+ +E+PE +
Sbjct: 535 ELMQEANQEVPEWL 548
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/376 (32%), Positives = 194/376 (51%), Gaps = 30/376 (7%)
Query: 65 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF---VLSSL---QQIDPVPGQVA--- 115
+ P+ VQ IP + D++ A++G GKTA F ++S + Q ++ G A
Sbjct: 171 YVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYP 230
Query: 116 -ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPG 174
A++L TRELA QI E ++FS Y +KV V YGG I L+ C I+V TPG
Sbjct: 231 FAVILSPTRELACQIHDEAKKFS-YQTGVKVVVAYGGTPIHQQLRELERGC-DILVATPG 288
Query: 175 RILALTRDKDLGLKNVRHFILDECDKMLESLDMR-----RDVQEIFKLTPHD-KQVMMFS 228
R+ L + ++ +R LDE D+ML DM R + E + P +Q M+FS
Sbjct: 289 RLNDLLERARVSMQMIRFLALDEADRML---DMGFEPQIRKIVEQMDMPPRGVRQTMLFS 345
Query: 229 ATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK-LQDSEKNRKLNDLLDALDF 287
AT +I+ + FM + + + V T L+ ++ +Q+S+K L DLL A
Sbjct: 346 ATFPSQIQRLAADFMSNYIFLAVGRVGSST--DLITQRVEFVQESDKRSHLMDLLHAQRE 403
Query: 288 NQ-----VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILV 342
Q ++FV++ A L L FP+ IH +Q+ER + FK G+ ILV
Sbjct: 404 TQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILV 463
Query: 343 ATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQ 402
ATD+ RG+DI V V+N+D+P+ D Y+HR+GR GR G G+A F + + ++++
Sbjct: 464 ATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNEN-NAQLARS 522
Query: 403 VQSRFEVDIKELPEQI 418
+ + +E+PE +
Sbjct: 523 LAELMQEANQEVPEWL 538
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/376 (32%), Positives = 194/376 (51%), Gaps = 30/376 (7%)
Query: 65 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF---VLSSL---QQIDPVPGQVA--- 115
+ P+ VQ IP + D++ A++G GKTA F ++S + Q ++ G A
Sbjct: 171 YVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYP 230
Query: 116 -ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPG 174
A++L TRELA QI E ++FS Y +KV V YGG I L+ C I+V TPG
Sbjct: 231 FAVILSPTRELACQIHDEAKKFS-YQTGVKVVVAYGGTPIHQQLRELERGC-DILVATPG 288
Query: 175 RILALTRDKDLGLKNVRHFILDECDKMLESLDMR-----RDVQEIFKLTPHD-KQVMMFS 228
R+ L + ++ +R LDE D+ML DM R + E + P +Q M+FS
Sbjct: 289 RLNDLLERARVSMQMIRFLALDEADRML---DMGFEPQIRKIVEQMDMPPRGVRQTMLFS 345
Query: 229 ATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK-LQDSEKNRKLNDLLDALDF 287
AT +I+ + FM + + + V T L+ ++ +Q+S+K L DLL A
Sbjct: 346 ATFPSQIQRLAADFMSNYIFLAVGRVGSST--DLITQRVEFVQESDKRSHLMDLLHAQRE 403
Query: 288 NQ-----VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILV 342
Q ++FV++ A L L FP+ IH +Q+ER + FK G+ ILV
Sbjct: 404 TQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILV 463
Query: 343 ATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQ 402
ATD+ RG+DI V V+N+D+P+ D Y+HR+GR GR G G+A F + + ++++
Sbjct: 464 ATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNEN-NAQLARS 522
Query: 403 VQSRFEVDIKELPEQI 418
+ + +E+PE +
Sbjct: 523 LAELMQEANQEVPEWL 538
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/376 (32%), Positives = 194/376 (51%), Gaps = 30/376 (7%)
Query: 65 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF---VLSSL---QQIDPVPGQVA--- 115
+ P+ VQ IP + D++ A++G GKTA F ++S + Q ++ G A
Sbjct: 171 YVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYP 230
Query: 116 -ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPG 174
A++L TRELA QI E ++FS Y +KV V YGG I L+ C I+V TPG
Sbjct: 231 FAVILSPTRELACQIHDEAKKFS-YQTGVKVVVAYGGTPIHQQLRELERGC-DILVATPG 288
Query: 175 RILALTRDKDLGLKNVRHFILDECDKMLESLDMR-----RDVQEIFKLTPHD-KQVMMFS 228
R+ L + ++ +R LDE D+ML DM R + E + P +Q M+FS
Sbjct: 289 RLNDLLERARVSMQMIRFLALDEADRML---DMGFEPQIRKIVEQMDMPPRGVRQTMLFS 345
Query: 229 ATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK-LQDSEKNRKLNDLLDALDF 287
AT +I+ + FM + + + V T L+ ++ +Q+S+K L DLL A
Sbjct: 346 ATFPSQIQRLAADFMSNYIFLAVGRVGSST--DLITQRVEFVQESDKRSHLMDLLHAQRE 403
Query: 288 NQ-----VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILV 342
Q ++FV++ A L L FP+ IH +Q+ER + FK G+ ILV
Sbjct: 404 TQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILV 463
Query: 343 ATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQ 402
ATD+ RG+DI V V+N+D+P+ D Y+HR+GR GR G G+A F + + ++++
Sbjct: 464 ATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNEN-NAQLARS 522
Query: 403 VQSRFEVDIKELPEQI 418
+ + +E+PE +
Sbjct: 523 LAELMQEANQEVPEWL 538
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 189/364 (51%), Gaps = 23/364 (6%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS---- 102
F D LLR + D G HP+ +Q + +P + G D+I A +G GKT VFVL
Sbjct: 99 FMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIIL 158
Query: 103 SLQQIDPVPGQVA----ALVLCHTRELAYQICHEFERFSTYL-----PDIKVAVFYGGVN 153
+LQ+ +P ALV+C +RELA Q E+F L P ++ + GGV+
Sbjct: 159 ALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVD 218
Query: 154 IKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQE 213
++ +++K HIVV TPGR+ + K + L R LDE D++++ L D++
Sbjct: 219 MRSQLDVVKKGV-HIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVD-LGFEDDIRH 276
Query: 214 IFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ-HYIKLQDS 272
+F +Q ++FSAT+ +I+ + P+ + V L + + Y+K
Sbjct: 277 VFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVK---- 332
Query: 273 EKNRKLNDLLDALDFNQ--VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRY 330
+ K+ LL+ L V+IF ++ + ++++ L+ ++ IH G QE+R
Sbjct: 333 -QEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAI 391
Query: 331 KGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 390
FK GK+ +LVATD+ +G+D + VINYDMP + Y+HR+GR GR G G+A TF
Sbjct: 392 SLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTF 451
Query: 391 VSSS 394
++ +
Sbjct: 452 INKN 455
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 207/405 (51%), Gaps = 34/405 (8%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS---- 102
F+D +L + + G P+ +Q + +P + G D+I A +G GKT VFVL
Sbjct: 148 FKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMI 207
Query: 103 SLQQIDPVPGQVAA------LVLCHTRELAYQICHEFERFSTYL-----PDIKVAVFYGG 151
+LQ+ +P +AA L++C +RELA Q E+F L P ++ + GG
Sbjct: 208 ALQEEMMMP--IAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGG 265
Query: 152 VNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDV 211
++++ E++K HIVV TPGR+ + K + L R+ LDE D++++ L D+
Sbjct: 266 IDMRSQLEVVKRGV-HIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVD-LGFEDDI 323
Query: 212 QEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ-HYIKLQ 270
+E+F +Q ++FSAT+ +I+ + + P+ + V L + + Y+K
Sbjct: 324 REVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQEVEYVK-- 381
Query: 271 DSEKNRKLNDLLDALDFNQ--VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLK 328
+ K+ LL+ L V+IF ++ + ++++ L+ ++ IH G QE+R
Sbjct: 382 ---QEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREY 438
Query: 329 RYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 388
FK GK+ +LVATD+ +G+D + VINYDMP + Y+HR+GR GR G G+A
Sbjct: 439 AISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIAT 498
Query: 389 TFVSSSGDS-------EVLNQVQSRFEVDIKELPEQIDTATYMPN 426
TF++ + +L + + R + EL + ++ A + N
Sbjct: 499 TFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEEAETIAN 543
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 185/356 (51%), Gaps = 16/356 (4%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F D +++ AI +E P+ +Q + +P + G DVI AK+G GKTA FVL +
Sbjct: 230 FEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVH 289
Query: 107 IDPVP------GQVAALVLCH-TRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKE 159
I P G + V+C TRELA+QI E ++FS ++V+ YGG++ +
Sbjct: 290 IMDQPELQRDEGPIG--VICAPTRELAHQIFLEAKKFSKAY-GLRVSAVYGGMSKHEQFK 346
Query: 160 LLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTP 219
LK C IVV TPGR++ + + K L + + +LDE D+M + L V+ I
Sbjct: 347 ELKAGC-EIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFD-LGFEPQVRSIVGQIR 404
Query: 220 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY-IKLQDSEK-NRK 277
D+Q ++FSAT+ ++ + ++ + DP+ + V E + + Q + D+EK
Sbjct: 405 PDRQTLLFSATMPWKVEKLAREILSDPIRVTVG-EVGMANEDITQVVNVIPSDAEKLPWL 463
Query: 278 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGK 337
L L +D V++F + E+ L +F +H Q R++ + FK G
Sbjct: 464 LEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGV 523
Query: 338 QRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK-GLAITFVS 392
+L+ATD+ RG+DI+ + V+NYD+ D ++HR+GR GR G + G+A T V+
Sbjct: 524 HHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVT 579
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 181/357 (50%), Gaps = 34/357 (9%)
Query: 63 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP-----GQVA-- 115
S HP E IP + DVI + +G GKTA FVL L I +P Q
Sbjct: 220 SKIPHPMRNWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGP 279
Query: 116 -ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPG 174
ALV+ TRELA+QI E +FS YL K G +I+ L C IV+ TPG
Sbjct: 280 YALVMVPTRELAHQIEEETVKFSRYL-GFKAVSITGWESIEKQALKLSQGC-EIVIATPG 337
Query: 175 RILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHD------------- 221
R+L + + L + +LDE D+M++ +D V E+ + P
Sbjct: 338 RLLDCLERRYVVLNQCNYLVLDEADRMID-MDFEPQVSEVLDVMPCSNLKPEKEDEELEE 396
Query: 222 ----KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRK 277
+ MFSAT+ + + +KF+++P+ + + + K + Q I ++S+K +
Sbjct: 397 KKIYRTTYMFSATMLLSVERLARKFLRNPVVVTIGETTKF----ITQQVIMTKESDKFSR 452
Query: 278 LNDLLDAL-DFNQVVIFVKSVSRAAELNKLLVECNFPSIC-IHSGMSQEERLKRYKGFKE 335
L L+D L D ++FV + ++ + K L + + +H+G SQE+R + FK+
Sbjct: 453 LKKLIDDLGDDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKK 512
Query: 336 GKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
+ +LV TD++GRG+DI + VINYDMP++ D Y HR+GR GR G G+A TF++
Sbjct: 513 KRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLT 569
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 194/411 (47%), Gaps = 29/411 (7%)
Query: 23 KAPDSAKPAAETAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILG 82
KA + KP E K + + F F L P L+AI D+GFE + VQ +P + G
Sbjct: 360 KAVQTDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQG 419
Query: 83 MDVICQAKSGMGKTAVFVLSSLQQIDPVPGQ--------VAALVLCHTRELAYQICHEFE 134
DV+ +AK+G GKT F+L +++ + P + LV+C TRELA Q E
Sbjct: 420 KDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEAN 479
Query: 135 RFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRI---LALTRDKDLGLKNVR 191
Y P I V V GG + + ++ I+V TPGR+ + T L V+
Sbjct: 480 TLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVK 539
Query: 192 HFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY- 250
+LDE D +L+ + RRD++ I P +Q +FSAT+ +E+R +C ++ E
Sbjct: 540 VLVLDEADHLLD-MGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHVALKRDHEFIN 598
Query: 251 -VDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLL-----DALDFNQVVIFVKSVSRAAELN 304
V + + T + Q Y+ L+ LL D +D+ +V+IF + +
Sbjct: 599 CVQEGSGETHQKVTQMYMIASLDRHFSLLHVLLKEHIADNVDY-KVIIFCTTAMVTRLVA 657
Query: 305 KLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDM 364
LL + + IHS Q R + F++ K ILV +D+ RG+D V++V+ +
Sbjct: 658 DLLSQLSLNVREIHSRKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGL 717
Query: 365 PDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKELP 415
P + Y+HR+GR GR G +G + +L + F +K+LP
Sbjct: 718 PSDREQYIHRLGRTGRKGKEGEGVL---------LLAPWEEYFMSSVKDLP 759
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 185/351 (52%), Gaps = 15/351 (4%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L ++L + +E P +Q + +P + G D I AK+G GKT FVL L+ I P
Sbjct: 198 LTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQP 257
Query: 112 GQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECP 166
A LV+ TREL QI + +FS L I+ YGG + LK
Sbjct: 258 PVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPL-GIRCVPVYGGSGVAQQISELKRGT- 315
Query: 167 HIVVGTPGR---ILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 223
IVV TPGR IL + K L+ V ++DE D+M + + + I + ++Q
Sbjct: 316 EIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFD-MGFEPQITRIIQNIRPERQ 374
Query: 224 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQ-DSEKNRKLNDLL 282
++FSAT +++ + +K + P+EI V + ++ + ++++ +S++ +L +LL
Sbjct: 375 TVLFSATFPRQVETLARKVLNKPVEIQVG--GRSVVNKDITQLVEVRPESDRFLRLLELL 432
Query: 283 DAL-DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
+ ++++FV+S + L + +++ ++P + +H G Q +R FK +L
Sbjct: 433 GEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLL 492
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
+AT + RG+D++ + +V+N+D P+ + Y+HRVGR GR G KG A+TF+S
Sbjct: 493 IATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFIS 543
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 187/357 (52%), Gaps = 19/357 (5%)
Query: 50 FLLKPELLRAIVDS----GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQ 105
F + L I+D+ +E P +Q + +P + G D I AK+G GKT FVL L+
Sbjct: 530 FWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLR 589
Query: 106 QIDPVPGQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKEL 160
I P A LV+ TREL QI + +FS L I+ YGG +
Sbjct: 590 HIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPL-GIRCVPVYGGSGVAQQISE 648
Query: 161 LKNECPHIVVGTPGR---ILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKL 217
LK IVV TPGR IL + K L+ V ++DE D+M + + + I +
Sbjct: 649 LKRGT-EIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFD-MGFEPQITRIIQN 706
Query: 218 TPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQ-DSEKNR 276
++Q ++FSAT +++ + +K + P+EI V + ++ + ++++ +S++
Sbjct: 707 IRPERQTVLFSATFPRQVETLARKVLNKPVEIQVG--GRSVVNKDITQLVEVRPESDRFL 764
Query: 277 KLNDLLDAL-DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKE 335
+L +LL + ++++FV+S + L + +++ ++P + +H G Q +R FK
Sbjct: 765 RLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKN 824
Query: 336 GKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
+L+AT + RG+D++ + +V+N+D P+ + Y+HRVGR GR G KG A+TF+S
Sbjct: 825 DVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFIS 881
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 182/364 (50%), Gaps = 20/364 (5%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F + L P L+AI D+G+E + VQ +P + G DV+ +AK+G GKT F+L S++
Sbjct: 322 FDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEV 381
Query: 107 IDPVPGQ--------VAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHK 158
+ P + ALV+C TRELA Q E Y P I V V GG + + +
Sbjct: 382 VVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQ 441
Query: 159 ELLKNECPHIVVGTPGRI---LALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIF 215
+ ++ I+V TPGR+ + T LK V+ +LDE D +L+ + R+D++ I
Sbjct: 442 KRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLD-MGFRKDIERII 500
Query: 216 KLTPHDKQVMMFSATLSKEIRPVCKKFMQDPME-IYVDDEAKLTLHGLVQHYIKLQDSEK 274
P ++Q +FSAT+ +E+R +C ++ E + E + H V+ + ++
Sbjct: 501 SAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIASLDR 560
Query: 275 NRKL------NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLK 328
+ L ++ +D+ +V++F + + LL E N IHS Q R +
Sbjct: 561 HFSLLYTLLREHIMGNVDY-KVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSYRTR 619
Query: 329 RYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 388
F++ K ILV +D+ RG+D V +V+ +P + Y+HR+GR GR G +G I
Sbjct: 620 VSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEGEGI 679
Query: 389 TFVS 392
++
Sbjct: 680 LLLA 683
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 180/356 (50%), Gaps = 17/356 (4%)
Query: 52 LKPELLRAIVD----SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQI 107
LKP L I++ SGFE + VQ E IP DV+ A +G GKT F+L ++ I
Sbjct: 19 LKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEII 78
Query: 108 ------DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELL 161
P P QV +++ TREL+ QI E F + LP++ + GG ++ L
Sbjct: 79 RRSNSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTL 138
Query: 162 KNECPHIVVGTPGRIL-ALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPH 220
+ E ++++GTPGR+ + R + L +N+ ILDE D++L+ + ++ V I P
Sbjct: 139 EEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLD-MGFQKQVNYIISRLPK 197
Query: 221 DKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL-TLHGLVQHYIKLQDSEKNRKLN 279
++ +FSAT ++ + + K +++ ME+ E+K T GL Y+K + +K+ +L
Sbjct: 198 QRRTGLFSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSGLYCEYLKCEADQKSSQLV 257
Query: 280 DLLDALDFNQVVIFVKSVS----RAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKE 335
LL ++V+F + + L+K+ + H M Q+ R F E
Sbjct: 258 HLLIENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFTE 317
Query: 336 GKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 391
+L+ TD+ RG+DI ++ V+ YD P D ++HRVGR R +G AI F+
Sbjct: 318 ASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIVFL 373
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 185/352 (52%), Gaps = 11/352 (3%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F L P + AI G++ P+ +Q + +P + G+DV+ A++G GKTA F++ L++
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 107 IDP-VP-GQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNE 164
+ VP G V AL+L TR+LA Q +F + D++V++ GG +++ E L +
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTL-KFTKELGKFTDLRVSLLVGGDSMEDQFEEL-TK 147
Query: 165 CPHIVVGTPGRILALTRD-KDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 223
P +++ TPGR++ L + D+ L+ V + + DE D + + + +I ++Q
Sbjct: 148 GPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLF-GMGFAEQLHQILTQLSENRQ 206
Query: 224 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLD 283
++FSATL + K +++P + +D E K++ L ++ ++ EK L L+
Sbjct: 207 TLLFSATLPSALAEFAKAGLREPQLVRLDVENKIS-PDLKLSFLTVRPEEKYSALLYLVR 265
Query: 284 A--LDFNQVVIFVKSVSRAAELNKLLVECNF-PSICIHSGMSQEERLKRYKGFKEGKQRI 340
Q +IFV + +N L N PS+C + M Q+ R F+ K +
Sbjct: 266 EHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVC-YGDMDQDARKIHVSRFRARKTML 324
Query: 341 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
L+ TD+ RGIDI ++ VIN+D P ++HRVGRA R G G A +FV+
Sbjct: 325 LIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVT 376
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 184/389 (47%), Gaps = 21/389 (5%)
Query: 23 KAPDSAKP-AAETAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 81
K P S P + AK + + F F L P L+ I D+GF+ + VQ +P +
Sbjct: 57 KKPASTTPLVTQIAKTSDSYLSKTRFDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQ 116
Query: 82 GMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQ--------VAALVLCHTRELAYQICHEF 133
G D++ +AK+G GKT F+L S++ + P + LV+C TRELA Q E
Sbjct: 117 GKDILAKAKTGTGKTVAFLLPSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEA 176
Query: 134 ERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRI---LALTRDKDLGLKNV 190
Y P I V V GG + + L+ I+V TPGR+ + T L V
Sbjct: 177 NILLKYHPSIGVQVVIGGTKLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGV 236
Query: 191 RHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 250
+ +LDE D +L+ + RR+++ I P +Q +FSAT+S E+R +C ++ E
Sbjct: 237 KVLVLDEADHLLD-MGFRREIERIIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFV 295
Query: 251 --VDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLL-----DALDFNQVVIFVKSVSRAAEL 303
V + A T + Q Y+ L LL D + + +V+IF + +
Sbjct: 296 NCVQEGAGETHQKVSQMYMIASLDRHFSLLYGLLKKHITDNVGY-KVIIFCTTAMVTRLV 354
Query: 304 NKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYD 363
LL + + IHS Q R + F++ K ILV +D+ RG+D V++V+
Sbjct: 355 ADLLGKLSLNVREIHSRKPQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMG 414
Query: 364 MPDSADTYLHRVGRAGRFGTKGLAITFVS 392
+P + Y+HR+GR GR G +G + ++
Sbjct: 415 LPSDREQYIHRLGRTGRKGKEGEGVLLLA 443
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 175/341 (51%), Gaps = 16/341 (4%)
Query: 65 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAA-------- 116
FE PS +Q P + G D+I AK+G GKT F + ++ + ++
Sbjct: 134 FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPT 193
Query: 117 -LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGR 175
LVL TRELA QI + R + +K YGG + +++ IV+GTPGR
Sbjct: 194 CLVLSPTRELAVQIS-DVLREAGEPCGLKSICVYGGSSKGPQISAIRSGV-DIVIGTPGR 251
Query: 176 ILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEI 235
+ L L L +V +LDE D+ML+ + V+ I T +Q++MFSAT ++
Sbjct: 252 LRDLIESNVLRLSDVSFVVLDEADRMLD-MGFEEPVRFILSNTNKVRQMVMFSATWPLDV 310
Query: 236 RPVCKKFMQ-DPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDAL---DFNQVV 291
+ ++FM +P+++ + H ++Q L + ++++L LL+ N+V+
Sbjct: 311 HKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVL 370
Query: 292 IFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGI 351
+F A L + L + + ++ IH +Q ER + FKEG +LVATD+ RG+
Sbjct: 371 VFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGL 430
Query: 352 DIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
DI V +VINY P + + Y+HR+GR GR G KG+A TF +
Sbjct: 431 DIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFT 471
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 175/345 (50%), Gaps = 19/345 (5%)
Query: 56 LLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQID-PVPGQV 114
+LR + + GF+ P+ +Q + IP + G + A +G GKT F+ L ++ P +
Sbjct: 152 ILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKLKRPSTDGI 211
Query: 115 AALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKV---HKELLKNECPHIVVG 171
A++L RELA Q E ++ IK + F+ + K + K C +++
Sbjct: 212 RAVILSPARELAAQTAREGKKL------IKGSNFHIRLMTKPLVKTADFSKLWC-DVLIS 264
Query: 172 TPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVM-MFSAT 230
TP R+ + K + L V + +LDE DK+ E + + + + K + + +FSAT
Sbjct: 265 TPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQ-SLLKQIDCVVKACSNPSIIRSLFSAT 323
Query: 231 LSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKL---NDLLDALDF 287
L + + + M D + + + K T V+ + SE+ + L ++L+
Sbjct: 324 LPDSVEELARSIMHDAVRVIIG--RKNTASETVKQKLVFAGSEEGKLLALRQSFAESLN- 380
Query: 288 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLV 347
V+IFV+S RA EL L N + IHS + ER F+ G++ +L+ATD++
Sbjct: 381 PPVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVI 440
Query: 348 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
RG+D + +N VINYD PDSA Y+HR+GR+GR G G AITF +
Sbjct: 441 ARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYT 485
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 179/361 (49%), Gaps = 22/361 (6%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQ------ 105
L +++ A+ S FE + VQ IP DV A +G GKT FV+ ++
Sbjct: 23 LSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRST 82
Query: 106 QIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNEC 165
P P QV +++ TREL+ QI + + F + L ++ + GG +K ++++ E
Sbjct: 83 SFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEG 142
Query: 166 PHIVVGTPGRIL-ALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQV 224
++++GTPGR+ + R + L +N+ ILDE D++LE + +R V I P ++
Sbjct: 143 CNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLE-MGFQRQVNYIISRLPKQRRT 201
Query: 225 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL----------TLHGLVQHYIKLQDSEK 274
+FSAT ++ + + K +++P+ + V ++K T GL Y++ + +K
Sbjct: 202 GLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEYMECEADKK 261
Query: 275 NRKLNDLLDALDFNQVVIFVKSVSR----AAELNKLLVECNFPSICIHSGMSQEERLKRY 330
+ +L DLL ++++F + + L+K+ + I IH M Q R K
Sbjct: 262 SSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQNARDKAL 321
Query: 331 KGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 390
F + L+ TD+ RG+DI ++ V+ YD P + + HR GR R G +G AI F
Sbjct: 322 ASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAIVF 381
Query: 391 V 391
+
Sbjct: 382 L 382
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 184/362 (50%), Gaps = 26/362 (7%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS---- 102
F L P+LL + +G++ P+ +Q + IP A+ G ++ A +G GKTA F++
Sbjct: 112 FTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISR 171
Query: 103 ---------SLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN 153
S Q+ +P+ A+VL TREL Q+ + + LP K A+ GG
Sbjct: 172 CTTYHSEHPSDQRRNPL-----AMVLAPTRELCVQVEDQAKMLGKGLP-FKTALVVGGDP 225
Query: 154 IKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQE 213
+ ++ +++GTPGR++ L + L N+ F+LDE D ML+ R V +
Sbjct: 226 MSGQLYRIQQGV-ELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQR-GFRDQVMQ 283
Query: 214 IFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE 273
IF+ QV++FSAT+S+E+ V ++ + + + + K + Q I + +
Sbjct: 284 IFQAL-SQPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPN-KAVNQLAIWVDAKQ 341
Query: 274 KNRKLNDLLDALDFNQ--VVIFVKSVSRAAEL-NKLLVECNFPSICIHSGMSQEERLKRY 330
K +KL D+L + + + V++V S A L N + V ++ IH +ER
Sbjct: 342 KKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVM 401
Query: 331 KGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 390
F G+ +LV+T ++GRG+D+ V VI +DMP + Y+H +GRA R G KG AI F
Sbjct: 402 GSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVF 461
Query: 391 VS 392
V+
Sbjct: 462 VN 463
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 184/362 (50%), Gaps = 26/362 (7%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS---- 102
F L P+LL + +G++ P+ +Q + IP A+ G ++ A +G GKTA F++
Sbjct: 112 FTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISR 171
Query: 103 ---------SLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN 153
S Q+ +P+ A+VL TREL Q+ + + LP K A+ GG
Sbjct: 172 CTTYHSEHPSDQRRNPL-----AMVLAPTRELCVQVEDQAKMLGKGLP-FKTALVVGGDP 225
Query: 154 IKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQE 213
+ ++ +++GTPGR++ L + L N+ F+LDE D ML+ R V +
Sbjct: 226 MSGQLYRIQQGV-ELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQR-GFRDQVMQ 283
Query: 214 IFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE 273
IF+ QV++FSAT+S+E+ V ++ + + + + K + Q I + +
Sbjct: 284 IFQAL-SQPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPN-KAVNQLAIWVDAKQ 341
Query: 274 KNRKLNDLLDALDFNQ--VVIFVKSVSRAAEL-NKLLVECNFPSICIHSGMSQEERLKRY 330
K +KL D+L + + + V++V S A L N + V ++ IH +ER
Sbjct: 342 KKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVM 401
Query: 331 KGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 390
F G+ +LV+T ++GRG+D+ V VI +DMP + Y+H +GRA R G KG AI F
Sbjct: 402 GSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVF 461
Query: 391 VS 392
V+
Sbjct: 462 VN 463
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 180/339 (53%), Gaps = 14/339 (4%)
Query: 59 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQ-----QIDPVPGQ 113
AI + GF++ +++Q I + G DV+ A++G GKT F++ +++ + P G
Sbjct: 103 AIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELLFKERFSPRNG- 161
Query: 114 VAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTP 173
+V+C TRELA Q + E + V++ GG N + + + + ++V+ TP
Sbjct: 162 TGVIVICPTRELAIQTKNVAEELLKHHSQT-VSMVIGGNNRRSEAQRIAS-GSNLVIATP 219
Query: 174 GRIL-ALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLS 232
GR+L L K K+++ ++DE D++LE + D+ +I K+ P +Q +FSAT +
Sbjct: 220 GRLLDHLQNTKAFIYKHLKCLVIDEADRILEE-NFEEDMNKILKILPKTRQTALFSATQT 278
Query: 233 KEIRPVCKKFMQDPMEIYVDD-EAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDFNQVV 291
+++ + + + P+ + VDD K+T GL Q Y + ++ L L + N+ +
Sbjct: 279 SKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISFLKK-NLNKKI 337
Query: 292 IFVKSVSRAAELNKLLVECNFPSIC-IHSGMSQEERLKRYKGFKEGKQRILVATDLVGRG 350
+ S ++ + + +++ + + IH GM Q R K + F + K+ IL+ TD+ RG
Sbjct: 338 MVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGILLCTDVAARG 397
Query: 351 IDIERVNIVINYDMPDSADTYLHRVGRAGRF-GTKGLAI 388
+DI V+ +I YD PD Y+HRVGR R G KG A+
Sbjct: 398 LDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKAL 436
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 176/351 (50%), Gaps = 44/351 (12%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L ++L + +E P +Q + +P + G D I AK+G GKT FVL L+ I P
Sbjct: 403 LTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQP 462
Query: 112 GQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECP 166
A LV+ TREL QI + +FS L I V V YGG + LK
Sbjct: 463 PVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPV-YGGSGVAQQISELKRGT- 520
Query: 167 HIVVGTPGR---ILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 223
IVV TPGR IL + K L+ V + ++DE D+M + + + I + D+Q
Sbjct: 521 EIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFD-MGFEPQITRIVQNIRPDRQ 579
Query: 224 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQ-DSEKNRKLNDLL 282
++FSAT +++ + +K + P+EI V + ++ + ++++ +SE+ +L +LL
Sbjct: 580 TVLFSATFPRQVETLARKVLNKPVEIQVG--GRSVVNKDITQLVEIRPESERFSRLLELL 637
Query: 283 -DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
+ + +V++FV+S ++ K V CN +L
Sbjct: 638 GEWYEKGKVLVFVRSQEKSISDFKSDV-CN----------------------------LL 668
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
+AT + RG+D++ + +V+N+D P+ + Y+HRVGR GR G KG A+TF+S
Sbjct: 669 IATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFIS 719
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 176/407 (43%), Gaps = 57/407 (14%)
Query: 44 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSS 103
+ F + L LL ++ GF P++VQ +P I G D + Q+ +G GKT ++L
Sbjct: 109 AKSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPI 168
Query: 104 LQQIDPVP-------------GQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYG 150
L +I P+ ++ A+++ +REL QI E E+ + V G
Sbjct: 169 LSEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVG 228
Query: 151 GVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRD 210
G N +E LK P IVVGTPGRI +++ L R +LDE D++L S + R D
Sbjct: 229 GANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELL-SFNFRED 287
Query: 211 VQEIFKLTPH--------------DKQVMMFSATLSKEIRPVCKKFMQDPMEIYV----- 251
+ I + ++Q ++ SAT+ + K + +P+ +
Sbjct: 288 IHRILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTP 347
Query: 252 --------------------DDEAKLTLHGL---VQHYIKLQDSE-KNRKLNDLLDALDF 287
D + + T+ L ++HY + + K L + ALD
Sbjct: 348 LDTVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHALDA 407
Query: 288 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLV 347
V+ F+ + ++ L S +H + + R K FK G+ ++LV +L
Sbjct: 408 QSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELS 467
Query: 348 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSS 394
RG+D+ ++V+N ++P A Y HR GR GR G KG +T S
Sbjct: 468 ARGLDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEES 514
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 176/354 (49%), Gaps = 19/354 (5%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQ- 105
F L ++I + GF +++Q + IP ++G DV+ A++G GKT F++ +++
Sbjct: 156 FESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVEL 215
Query: 106 ----QIDPVPGQVAALVLCHTRELA---YQICHEFERFSTYLPDIKVAVFYGGVNIKVHK 158
+ P G LV+C TRELA Y + E ++ + V GG K
Sbjct: 216 LYRVKFTPRNG-TGVLVICPTRELAIQSYGVAKELLKYHSQT----VGKVIGGEKRKTEA 270
Query: 159 ELLKNECPHIVVGTPGRIL-ALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKL 217
E+L +++V TPGR+L L KN++ ++DE D++LE + D+++I L
Sbjct: 271 EILAKGV-NLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQ-NFEEDLKKILNL 328
Query: 218 TPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAK-LTLHGLVQHYIKLQDSEKNR 276
P +Q +FSAT S ++ + + + P+ I VD+ K +T GL Q Y + + +
Sbjct: 329 LPKTRQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLL 388
Query: 277 KLNDLLDALDFNQVVIFVKSVSRAAELN-KLLVECNFPSICIHSGMSQEERLKRYKGFKE 335
L L + ++ S ++ + + +L F + I G+ Q +R + F +
Sbjct: 389 FLLTFLKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIK 448
Query: 336 GKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF-GTKGLAI 388
+ IL+ T++ RG+D V+ ++ YD PD+ Y+HRVGR R G KG A+
Sbjct: 449 AETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKAL 502
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 128/454 (28%), Positives = 195/454 (42%), Gaps = 79/454 (17%)
Query: 45 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIP-QAILGMDVICQAKSGMGKTAVFVLSS 103
S + L P L+++I F+ P+++Q C A G DVI A++G GKT F L
Sbjct: 190 SAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPI 249
Query: 104 LQ--------------------QIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDI 143
LQ Q G + AL++ TRELA Q+ E + L +
Sbjct: 250 LQRLLDEREKVGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNL-SV 308
Query: 144 KVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKD---LGLKNVRHFILDECDK 200
KV GG+ + + LK E P IVV TPGR+ L + + L ++ F+LDE D+
Sbjct: 309 KVVPIVGGMFSEKQERRLK-EKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADR 367
Query: 201 MLESLDMRRDVQEIFKLTP------------------------HDKQVMMFSAT--LSKE 234
M+E R ++Q I L P +Q +FSAT LS +
Sbjct: 368 MVERGHFR-ELQSILDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSD 426
Query: 235 IRPVCKKF-----------------------MQDPMEIYVDDEAKLTLHGLVQHYIKLQD 271
R K+ M+D + I + + + +IK ++
Sbjct: 427 FRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDNVAIIDLTTTSILAPKIEESFIKCEE 486
Query: 272 SEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYK 331
EK+ L +L + ++F SV+ ++ LL + S M Q RLK
Sbjct: 487 KEKDAYLYYILSVHGQGRTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKSID 546
Query: 332 GFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 391
F+ + IL+ATDLV RGIDI+ V +I+Y +P SA+ Y+HR GR R G +I +
Sbjct: 547 RFRASENGILIATDLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIALI 606
Query: 392 SSSGDSEVLNQVQSRFEVDIKELPEQIDTATYMP 425
+ S+ +S +K P +D +YMP
Sbjct: 607 EPNETSKFYTLCKSFSMESVKIFP--LDN-SYMP 637
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 162/313 (51%), Gaps = 13/313 (4%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F+D +L AI GF P+ +Q + P A+ G D+I A++G GKT ++L +L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 107 IDPVP--GQ---VAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELL 161
+ P GQ L+L TRELA QI E +F ++ YGG L
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRS-GVRSTCIYGGAPKGPQIRDL 285
Query: 162 KNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHD 221
+ IV+ TPGR++ + + LK V + +LDE D+ML+ + +++I D
Sbjct: 286 RRGV-EIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLD-MGFEPQIRKIVSQIRPD 343
Query: 222 KQVMMFSATLSKEIRPVCKKFMQDPMEIYV---DDEAKLTLHGLVQHYIKLQDSEKNRKL 278
+Q +++SAT +E+ + ++F++DP + + D +A +++ +++ I + NR L
Sbjct: 344 RQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIE--IVPTPEKYNRLL 401
Query: 279 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQ 338
L +D ++++IFV++ ++ + L +P++ IH +Q ER + FK G+
Sbjct: 402 TLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRS 461
Query: 339 RILVATDLVGRGI 351
I+ ATD+ RG+
Sbjct: 462 PIMTATDVAARGL 474
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 181/370 (48%), Gaps = 31/370 (8%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F + + P L+A+ SG + VQ + + + G D + +AK+G GK+ F+L +++
Sbjct: 330 FDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIET 389
Query: 107 IDPVPGQ---------VAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVH 157
+ + AL+LC TRELA QI E + + I V GG K+
Sbjct: 390 VLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQTLIGGTRFKLD 449
Query: 158 KELLKNECPHIVVGTPGRILALTRDKDLGLKN----VRHFILDECDKMLESLDMRRDVQE 213
++ L++E I++ TPGR+L +K GL + ++ FI+DE D +L+ L RRDV++
Sbjct: 450 QQRLESEPCQILIATPGRLLDHIENKS-GLTSRLMALKLFIVDEADLLLD-LGFRRDVEK 507
Query: 214 IFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDS- 272
I P +Q ++FSAT+ KE+R V + ++ Y+D G V+ + K++ S
Sbjct: 508 IIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHS-YIDTIG----LGCVETHDKVRQSC 562
Query: 273 -----EKNRKLNDLLDALDFN-----QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 322
E + L L N ++++F + + + LL E IH+
Sbjct: 563 IVAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKP 622
Query: 323 QEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 382
Q R + FKE + ILV +D+ RG++ V +VI +P + Y+HR+GR GR G
Sbjct: 623 QLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREG 682
Query: 383 TKGLAITFVS 392
G + ++
Sbjct: 683 KGGEGLLLIA 692
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 186/392 (47%), Gaps = 24/392 (6%)
Query: 50 FLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDP 109
F + L + +G E +Q + G D++ +A++G GKT FVL L+ +
Sbjct: 101 FRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVN 160
Query: 110 VPGQV----------AALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKE 159
P + + LVL TRELA Q+ +F+ + L + YGG + V +
Sbjct: 161 GPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSL-GLSSCCLYGGDSYPVQEG 219
Query: 160 LLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIF-KLT 218
LK IVVGTPGRI ++L ++ +LDE D+ML + DV+ I K+
Sbjct: 220 KLKRGV-DIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLR-MGFVEDVELILGKVE 277
Query: 219 PHDK-QVMMFSATLSKEIRPVCKKFMQ-DPMEIYVDDEAKLTLHGLVQHY-IKLQDSEKN 275
K Q ++FSATL ++ + +F++ D I + K+ V+H I +
Sbjct: 278 DSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAAMA 337
Query: 276 RKLNDLLDALDFN-QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFK 334
R + D++ Q +IF ++ + +EL+ LL S +H + Q +R GF+
Sbjct: 338 RLIPDIISCYSSGGQTIIFAETKVQVSELSGLL----DGSRALHGEIPQSQREVTLAGFR 393
Query: 335 EGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS- 393
GK LVAT++ RG+DI V ++I + P + Y+HR GR GR G G+A+T S
Sbjct: 394 NGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTLYDSR 453
Query: 394 -SGDSEVLNQVQSRFEVDIKELPEQIDTATYM 424
S S + + +FE P++I + M
Sbjct: 454 KSSVSRIEKEAGIKFEHLAAPQPDEIARSGGM 485
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 194/390 (49%), Gaps = 34/390 (8%)
Query: 26 DSAKPAAETAKKGYVGIHSSGFRDFLLKP---ELLRAIVDSGFEHPSEVQHECIPQAILG 82
DS +E K G V +G R F P + R + D+ + ++VQ IP A+ G
Sbjct: 49 DSKIGKSEDGKNGTVFSRYAGVRKFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCG 108
Query: 83 MDVICQAKSGMGKTAVFVLSSLQQI-----DPVPGQVAALVLCHTRELAYQI------CH 131
D++ A++G GKT FV+ L+++ P G V +++ TRELA Q
Sbjct: 109 RDILGAARTGSGKTLAFVIPILEKLHRERWSPEDG-VGCIIISPTRELAAQTFGVLNKVG 167
Query: 132 EFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILA-LTRDKDLGLKNV 190
+F +FS L + G + V KE + +I+V PGR+L + + +
Sbjct: 168 KFHKFSAGL------LIGGREGVDVEKERVHEM--NILVCAPGRLLQHMDETPNFECPQL 219
Query: 191 RHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 250
+ ILDE D++L+S + + I P +Q ++FSAT +K+++ + + ++DP I
Sbjct: 220 QILILDEADRVLDSA-FKGQLDPIISQLPKHRQTLLFSATQTKKVKDLARLSLRDPEYIS 278
Query: 251 VDDEA-KLTLHGLVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAA----ELNK 305
V EA T L+Q + + +K L + +++++F+ + + NK
Sbjct: 279 VHAEAVTATPTSLMQTVMIVPVEKKLDMLWSFIKTHLNSRILVFLSTKKQVKFVHEAFNK 338
Query: 306 LLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIER-VNIVINYDM 364
L P +H MSQE+R+ Y F E +Q +L TD++ RG+D ++ V+ V+ D
Sbjct: 339 L--RPGIPLKSLHGKMSQEKRMGVYSQFIE-RQSVLFCTDVLARGLDFDKAVDWVVQVDC 395
Query: 365 PDSADTYLHRVGRAGRFGTKGLAITFVSSS 394
P+ +Y+HRVGR RF T+G ++ F++ S
Sbjct: 396 PEDVASYIHRVGRTARFYTQGKSLLFLTPS 425
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 169/335 (50%), Gaps = 26/335 (7%)
Query: 74 ECIPQAILGMDVICQAKSGMGKTAVFVLS-------------SLQQIDPVPGQVAALVLC 120
+ IP A+ G ++ A +G GKTA F++ S Q+ +P+ A+VL
Sbjct: 2 QAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPL-----AMVLA 56
Query: 121 HTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALT 180
TREL Q+ + + LP K A+ GG + ++ +++GTPGR++ L
Sbjct: 57 PTRELCVQVEDQAKMLGKGLP-FKTALVVGGDPMSGQLYRIQQGV-ELIIGTPGRVVDLL 114
Query: 181 RDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCK 240
+ L N+ F+LDE D ML+ R V +IF+ QV++FSAT+S+E+ V
Sbjct: 115 SKHTIELDNIMTFVLDEVDCMLQR-GFRDQVMQIFQALSQ-PQVLLFSATISREVEKVGG 172
Query: 241 KFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDFNQ--VVIFVKSVS 298
++ + + + + K + Q I + +K +KL D+L + + + V++V S
Sbjct: 173 SLAKEIILVSIGNPNKPN-KAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRV 231
Query: 299 RAAEL-NKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVN 357
A L N + V ++ IH +ER F G+ +LV+T ++GRG+D+ V
Sbjct: 232 GADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVR 291
Query: 358 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
VI +DMP + Y+H +GRA R G KG AI FV+
Sbjct: 292 QVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVN 326
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 180/378 (47%), Gaps = 47/378 (12%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F + + P L+A+ SG + VQ + + + G D + +AK+G GK+ F+L +++
Sbjct: 377 FDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIET 436
Query: 107 IDPVPGQ---------VAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVH 157
+ + L+LC TRELA QI E + I V GG ++
Sbjct: 437 VLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFRLD 496
Query: 158 KELLKNECPHIVVGTPGRILALTRDKDLGLKN----VRHFILDECDKMLESLDMRRDVQE 213
++ L++E I++ TPGR+L +K GL + ++ FI+DE D +L+ L +RDV++
Sbjct: 497 QQRLESEPCQILIATPGRLLDHIENKS-GLTSRLMALKLFIVDEADLLLD-LGFKRDVEK 554
Query: 214 IFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD----------DEAKLT----- 258
I P +Q ++FSAT+ KE+R V + ++ Y+D D+ K +
Sbjct: 555 IIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHS-YIDTIGLGCVETHDKVKQSCIVAP 613
Query: 259 ----LHGLVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPS 314
H LV H +K +N++ D ++++F + + + LL E
Sbjct: 614 HESHFH-LVPHLLK-------EHINNMPDY----KIIVFCSTGMVTSLMYTLLREMKLNV 661
Query: 315 ICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHR 374
IH+ Q R FKE + ILV +D+ RG++ V +VI +P + Y+HR
Sbjct: 662 REIHARKPQLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHR 721
Query: 375 VGRAGRFGTKGLAITFVS 392
+GR GR G G + ++
Sbjct: 722 LGRTGREGKGGKGLLLIA 739
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 191/445 (42%), Gaps = 85/445 (19%)
Query: 29 KPAAETAKKGYVGIHSS-GFRDFLLKPELLRAIVDS-GFEHPSEVQHECIPQAILGMDVI 86
K A+ A K G+ +S F L +L + + GFE P+ VQ + IP + G DV+
Sbjct: 12 KQEAKDASKAKSGLFASCSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVL 71
Query: 87 CQAKSGMGKTAVFV---LSSLQ----QIDPVPGQVAALVLCHTRELAYQICHEFERFSTY 139
A +G GKT ++ + LQ ++D G A LV+ TREL Q+ E+
Sbjct: 72 VNAPTGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFA-LVIVPTRELCLQVYETLEKLLHR 130
Query: 140 LPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRIL-ALTRDKDLGLKNVRHFILDEC 198
I GG K L+ I++ TPGR+L L KN+R I DE
Sbjct: 131 FHWIVPGYVMGGEKKAKEKARLRKGI-SILIATPGRLLDHLKNTASFVHKNLRWVIFDEA 189
Query: 199 DKMLESLDMRRDVQEIFKL--------------TPH--DKQVMMFSATLSKEIRPVCKKF 242
D +LE L +++++I KL P KQ ++ SATL+ ++ + K
Sbjct: 190 DSILE-LGYGKEIEQIIKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLS 248
Query: 243 MQDPMEIYVD------------------DEAKLTLH----------------GLVQHYIK 268
+ DP+ I +D D + +H LVQ Y++
Sbjct: 249 LDDPVMIGLDNTKLQQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLR 308
Query: 269 LQDSEKNRKLNDLLDAL---DFNQVVIFVKSVSRAAELN-KLLVECNFP----------- 313
+ + L +L L + +Q V+ S A + + LL E +P
Sbjct: 309 VPCGARLVALLSVLKNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTK 368
Query: 314 -------SICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPD 366
+ +H M QE+R + FK KQ +L++TD+ RG+D +V +I YD P
Sbjct: 369 ELFLKCKTFRLHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPG 428
Query: 367 SADTYLHRVGRAGRFGTKGLAITFV 391
A Y+HRVGR R G KG A+ F+
Sbjct: 429 EATEYVHRVGRTARIGEKGEALLFL 453
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 181/373 (48%), Gaps = 37/373 (9%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F++ L E++ A+ + E P+E+Q IP + V+ + +G GKT ++L +Q
Sbjct: 114 FQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQL 173
Query: 107 I---------DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVH 157
+ P + +VLC TREL+ Q+ + + ++ + + GG I+
Sbjct: 174 MREDEANLGKKTKPRRPRTVVLCPTRELSEQV-YRVAKSISHHARFRSILVSGGSRIRPQ 232
Query: 158 KELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLE---SLDMRRDV--- 211
++ L N +VVGTPGRIL + ++ ++ + +LDE D M + ++R+ +
Sbjct: 233 EDSLNNAI-DMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPL 291
Query: 212 -QEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQH----Y 266
Q K Q ++ +AT++ ++ + + Q + TLH + + +
Sbjct: 292 NQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTS-----TLHKKIANARHDF 346
Query: 267 IKLQDSEKNRKLNDLLDALD-----FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 321
IKL E KL LL L+ ++V++F +++ + ++ L E ++ H +
Sbjct: 347 IKLSGGED--KLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEV 404
Query: 322 SQEERLKRYKGFK--EGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAG 379
E+R++ K FK EG LV TDL RG+D++ V+ V+ +D P ++ YLHR GR
Sbjct: 405 PAEQRVENLKKFKDEEGDCPTLVCTDLAARGLDLD-VDHVVMFDFPKNSIDYLHRTGRTA 463
Query: 380 RFGTKGLAITFVS 392
R G KG + VS
Sbjct: 464 RMGAKGKVTSLVS 476
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 179/394 (45%), Gaps = 40/394 (10%)
Query: 54 PE-LLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPG 112
PE +L + + GF P+++Q E +P G D I A++G GKT ++L I+P
Sbjct: 84 PEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLINPQRS 143
Query: 113 QVAALVLCHTRELAYQICHEFERFSTYLPDIKV------AVFYGGVNIKVHKELLKNECP 166
V A+++ TREL Q+ + R +I V A+ GG ++ HK LK E P
Sbjct: 144 SVQAVIVVPTRELGMQVT-KVARMLAAKSEIDVKGCTVMALLDGG-TLRRHKSWLKAEPP 201
Query: 167 HIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIF-KLTPHDKQVM 225
I+V T + + + +VR ++DE D + S V+++ + DK+
Sbjct: 202 AILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQT 261
Query: 226 MF-SATLSKEIRPVCKKFMQDPME--------IYVDDEAKLTLH-GLVQHYIKLQDSEKN 275
+F SA++ P K F+ D ++ ++V A + + L+ ++ + + K+
Sbjct: 262 VFASASI-----PQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKH 316
Query: 276 RKLNDLLDALDFNQVVIFV-------------KSVSRAAELNKLLVECNFPSICIHSGMS 322
+ L LL++ +IFV S + E K + + + + M+
Sbjct: 317 QVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMN 376
Query: 323 QEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR-- 380
R ++G +LV+TD+ RGID+ + N+D+P + YLHR GRAGR
Sbjct: 377 FNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKP 436
Query: 381 FGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKEL 414
F + + + +S + VL + ++ +E+
Sbjct: 437 FSDRKCIVANLITSEERFVLQRYENELMFSCEEM 470
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 195/447 (43%), Gaps = 76/447 (17%)
Query: 52 LKPELLRAIVDSG----FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQI 107
L P+L +A+ + G F V HE I D+ + +G GKT + L +Q +
Sbjct: 38 LNPKLKKALENMGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQLL 97
Query: 108 DPVPGQ-VAALVLCHTRELAYQICHEFERFSTYLPDIKVAV--------FYGGVN--IKV 156
P + + ALV+ TR+LA Q+ F+ + P + ++V G ++ IK
Sbjct: 98 ASRPVRCLRALVVLPTRDLALQVKDVFDAIA---PAVGLSVGSAVGQSSIAGEISQLIKT 154
Query: 157 HK----------ELLKN--ECPHIVVGTPGRIL-ALTRDKDLGLKNVRHFILDECDKMLE 203
K +L +N I+V TPGR++ + K L+++R+ ++DE D++L
Sbjct: 155 PKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLR 214
Query: 204 ----------------------------------SLDM--RRDVQEIFKLTPHDKQV-MM 226
SL R+ V+ FK P+ + V M+
Sbjct: 215 EAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMV 274
Query: 227 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALD 286
SATL+++ + + + P+ + L + + K L LL + +
Sbjct: 275 LSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLICETGMKPVYLVALLKSWE 334
Query: 287 FNQVVIFVKSVSRAAELNKLLVECNFPSICI---HSGMSQEERLKRYKGFKEGKQRILVA 343
+ +IF SV L KLL P I G++Q R K K F++G ++LVA
Sbjct: 335 GEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQVLVA 394
Query: 344 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS---SGDSEVL 400
+D + RG+D++ V VINYDMP A T++HR GR R G G T +S+ S++L
Sbjct: 395 SDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRFSKLL 454
Query: 401 NQVQSRFEVDIKELPEQIDT--ATYMP 425
+V S P +D+ ATY P
Sbjct: 455 EKVGSDSCPIYPIPPTSLDSIRATYTP 481
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 170/388 (43%), Gaps = 58/388 (14%)
Query: 46 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQ 105
F + L L+RA+ G E P+ +Q IP + G DV+ +AK+G GKT ++L LQ
Sbjct: 47 SFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQ 106
Query: 106 QI---DPVPGQ---VAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKE 159
++ D V + +A +L +REL Q+ + S+ + +V + + +
Sbjct: 107 KLFSADSVSKKKLAPSAFILVPSRELCQQV---YTEVSSLIELCRVQLKAVQLTSSMSAS 163
Query: 160 LLKNE---CPHIVVGTPGRI----LALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQ 212
++N P I+V TP I A + +++ +LDE D +L S +++
Sbjct: 164 DMRNALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLL-SYGYEDNLR 222
Query: 213 EIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYV---DDEAKLTLHGLVQHYI-- 267
+ + P Q ++ SAT S ++ + K + +P+ + + +D+ + + Q +I
Sbjct: 223 SVTSIIPRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQFWISC 282
Query: 268 KLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERL 327
QD + L+ + +++IF+ ++ L L + S ++ + Q RL
Sbjct: 283 SAQDKLLHILALLKLEVVQ-KKILIFINTIDMGFRLKLFLEKFGIKSAILNGELPQNSRL 341
Query: 328 KRYKGFKEGKQRILVATD-----------------------------------LVGRGID 352
+ F G L+ATD V RGID
Sbjct: 342 HILEQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGID 401
Query: 353 IERVNIVINYDMPDSADTYLHRVGRAGR 380
++V+ VIN+DMP S Y+HR+GR GR
Sbjct: 402 FKKVHTVINFDMPQSVTGYIHRIGRTGR 429
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 155/374 (41%), Gaps = 47/374 (12%)
Query: 55 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQI------- 107
++++A+ + F+ P+ +Q I G I +SG GKT +++ +Q++
Sbjct: 384 DMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQRLREEELQG 443
Query: 108 --DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNEC 165
PG +VL T ELA Q+ S + V GG + E L+ +
Sbjct: 444 HSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRTQLENLE-QG 502
Query: 166 PHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVM 225
+++ TPGR L + LGL N+R ILDE D + + +Q + +P Q +
Sbjct: 503 VDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLINSSPVTAQYL 562
Query: 226 MFSATLSKEIR-------PVCKKFM-------QDPMEIYV-----DDEAKLTLHGLVQHY 266
+ATL EI P C+ M + +E ++ DD A+ T Q+
Sbjct: 563 FVTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGDDNAEKTPETAFQN- 621
Query: 267 IKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL-----VECNFPSICIHSGM 321
K L +++ ++ +IF + ++ + E + H+ +
Sbjct: 622 -------KKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHAAL 674
Query: 322 SQEERLKRYKGFK----EGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 377
SQE RL + F E LV TD RGID V+ V+ +D P Y+ RVGR
Sbjct: 675 SQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRVGR 734
Query: 378 AGRFGTKGLAITFV 391
R G +G F+
Sbjct: 735 TAR-GARGKGKAFI 747
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 152/320 (47%), Gaps = 49/320 (15%)
Query: 52 LKPELLRAIVD----SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQI 107
LKP L I++ SGFE + VQ E IP DV+ A +G GKT F+L ++ I
Sbjct: 20 LKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEII 79
Query: 108 ------DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAV---FYGGVNIKVHK 158
P P QV +++ TREL+ QI H+ R AV F ++
Sbjct: 80 RRSNSYPPKPHQVMGVIISPTRELSAQI-HKVAR----------AVRLDFAKCREVEADM 128
Query: 159 ELLKNECPHIVVGTPGRIL-ALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKL 217
L+ E ++++GTPGR+ + R + L +N+ ILDE D++L+ + ++ V I
Sbjct: 129 NTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLD-MGFQKQVNYIISR 187
Query: 218 TPHDKQVMMFSATLSKEIRPVCKKFMQDP-MEIYVDDEAKLTLHGLVQHYIKLQDSEKNR 276
P ++ +FSAT ++ + + K +++P ++ D ++ +H L+++ KN+
Sbjct: 188 LPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLVHLLIEN--------KNK 239
Query: 277 KLNDLL---DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGF 333
KL +D+ +VI S+ L + FP+ H M Q+ R F
Sbjct: 240 KLVVFFMTCACVDYWGLVI-----SKIPSLKSISF---FPT---HGKMDQKGRDTALASF 288
Query: 334 KEGKQRILVATDLVGRGIDI 353
E +L+ TD+ RG+DI
Sbjct: 289 TEASSGVLLCTDVAARGLDI 308
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 129/296 (43%), Gaps = 31/296 (10%)
Query: 145 VAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLES 204
V G ++ HK LK E P I+V T + + + +VR ++DE D + S
Sbjct: 23 VMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYS 82
Query: 205 LDMRRDVQEIF-KLTPHDKQVMMF-SATLSKEIRPVCKKFMQDPME--------IYVDDE 254
V+++ + DK+ +F SA++ P K F+ D ++ ++V
Sbjct: 83 SKQVGSVRKLLTSFSSCDKRQTVFASASI-----PQHKHFVHDCIQQKWTKRDVVHVHVS 137
Query: 255 AKLTLH-GLVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFV-------------KSVSRA 300
A + + L+ ++ + + K++ L LL++ +IFV S +
Sbjct: 138 AIMPMPLCLLHRFVMCEKTNKHQVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLL 197
Query: 301 AELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVI 360
E K + + + + M+ R ++G +LV+TD+ RGID+ +
Sbjct: 198 MEFLKTSYKGSLEILLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIF 257
Query: 361 NYDMPDSADTYLHRVGRAGR--FGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKEL 414
N+D+P + YLHR GRAGR F + + + +S + VL + ++ +E+
Sbjct: 258 NFDLPQTVTDYLHRAGRAGRKPFSDRKCIVANLITSEERFVLQRYENELMFSCEEM 313
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 38/198 (19%)
Query: 32 AETAKKG---YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQ 88
AE KKG + H+ ++ L + A+ DSGF+ PS Q CIP + G DVI
Sbjct: 64 AEVEKKGNDTFFADHTVSWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVA 123
Query: 89 AKSGMGKTAVFVLSSLQQID--------------PVPGQVAALVLCHTRELAYQICHEFE 134
A++G GKT ++ + Q+ P P + +L+LC +C +
Sbjct: 124 AETGSGKTHGYLAPIIDQLTNTALDSEVTNREERPFPLKNISLILCPN----VMLCEQVV 179
Query: 135 RFSTYL------PDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRIL---ALTRDKDL 185
R L P ++V G + + P I+V TP +L R++ L
Sbjct: 180 RMVNGLVDEDGNPLLRVEAVCGS-------QGWPDRLPDIIVSTPAALLNNIEPKRNRRL 232
Query: 186 G-LKNVRHFILDECDKML 202
L+ V++ + DE D +L
Sbjct: 233 EFLRCVKYVVFDEADMLL 250
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 25/204 (12%)
Query: 206 DMRRDVQEIFKLTPHDKQVMMFSATL----SKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 261
D ++ + + K+ KQ + +ATL K + K QD + + + LH
Sbjct: 337 DTKKGWRRVRKIYTRSKQYIFIAATLPVNGKKTAGGILKHMFQDAVWVSGN-----FLHR 391
Query: 262 ----LVQHYIKLQ-DSEKNRKLNDLLDALDF------NQVVIFVKSVSRAAELNKLLVEC 310
L Q ++++ DS+ ++ L++A+ + ++F +V + +L +
Sbjct: 392 NSPRLKQKWVEVTVDSQ----VDALIEAVKNNNNTNTERTMVFANTVEAVEAVADILEKA 447
Query: 311 NFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADT 370
+ H +ER F+E + V TD RG+D+ V+ VI D SA
Sbjct: 448 SIQCYRYHKNHKLDERANILADFRETGG-VFVCTDAAARGVDVPNVSHVIQADFASSAVD 506
Query: 371 YLHRVGRAGRFGTKGLAITFVSSS 394
+LHR+GR R G G + + +
Sbjct: 507 FLHRIGRTARAGQYGTVTSLYTEA 530
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 286 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATD 345
+ ++++ K ++K L + N + HSG+ ++R++ + F K R++VAT
Sbjct: 485 EIRSIIVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNKIRVVVATV 544
Query: 346 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 382
G G+D V VI++ +P S + Y+ +GRAGR G
Sbjct: 545 AFGMGLDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDG 581
>AT3G05740.1 | Symbols: RECQI1 | RECQ helicase l1 |
chr3:1698180-1701228 FORWARD LENGTH=606
Length = 606
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 263 VQHYIKLQDSEKNRKLNDLL-DALDFNQVVIFVKSVSRAAELNKLLVE-CNFPSICIHSG 320
+++ + ++ E ++L +LL D +++ S S ++ K L E C ++ H+G
Sbjct: 402 LKYEVIVKTKEPLKQLQELLRDRFKDQSGIVYCLSKSECVDVAKFLNEKCKVKTVYYHAG 461
Query: 321 MSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 380
+ ++R+ + ++ G+ RI+ AT G GID V VI+ + + ++Y GRAGR
Sbjct: 462 VPAKQRVDVQRKWQTGEVRIVCATIAFGMGIDKADVRFVIHNTLSKAVESYYQESGRAGR 521
Query: 381 FGTKGLAITFVSSSGDSEVL 400
G + I S V+
Sbjct: 522 DGLQAQCICLYQKKDFSRVV 541