Miyakogusa Predicted Gene

Lj0g3v0207209.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0207209.3 Non Chatacterized Hit- tr|Q84RE5|Q84RE5_ARATH
Putative uncharacterized protein At2g23755/F27L4.16 OS,64.86,0.0008,
,CUFF.13292.3
         (76 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G23755.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    48   1e-06

>AT2G23755.1 | Symbols:  | unknown protein; FUNCTIONS IN:
          molecular_function unknown; INVOLVED IN:
          biological_process unknown; LOCATED IN: endomembrane
          system; Has 35333 Blast hits to 34131 proteins in 2444
          species: Archae - 798; Bacteria - 22429; Metazoa - 974;
          Fungi - 991; Plants - 531; Viruses - 0; Other
          Eukaryotes - 9610 (source: NCBI BLink). |
          chr2:10103375-10103985 REVERSE LENGTH=150
          Length = 150

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/37 (64%), Positives = 24/37 (64%)

Query: 1  MATSRRLFNFCSLLMATLFMYSASVQLNDPGSSKGVP 37
          MA  R LF  CSLLMA LF YSASVQLNDP      P
Sbjct: 1  MAKPRNLFRVCSLLMAFLFAYSASVQLNDPDWYFWFP 37