Miyakogusa Predicted Gene

Lj0g3v0207199.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0207199.1 Non Chatacterized Hit- tr|I1H7V2|I1H7V2_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,55.56,2e-19,Lzipper-MIP1,Ternary complex factor MIP1,
leucine-zipper; UNCHARACTERIZED,NULL,CUFF.13272.1
         (154 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66600.3 | Symbols:  | Protein of unknown function, DUF547 | ...   139   9e-34
AT5G66600.1 | Symbols:  | Protein of unknown function, DUF547 | ...   139   9e-34
AT5G66600.2 | Symbols:  | Protein of unknown function, DUF547 | ...   134   2e-32
AT5G66600.4 | Symbols:  | Protein of unknown function, DUF547 | ...   133   4e-32
AT2G23700.1 | Symbols:  | Protein of unknown function, DUF547 | ...   125   9e-30
AT5G47380.1 | Symbols:  | Protein of unknown function, DUF547 | ...    60   6e-10
AT1G76620.1 | Symbols:  | Protein of unknown function, DUF547 | ...    53   7e-08
AT1G21060.2 | Symbols:  | Protein of unknown function, DUF547 | ...    52   2e-07
AT1G21060.1 | Symbols:  | Protein of unknown function, DUF547 | ...    52   2e-07

>AT5G66600.3 | Symbols:  | Protein of unknown function, DUF547 |
           chr5:26575105-26578315 REVERSE LENGTH=614
          Length = 614

 Score =  139 bits (349), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 78/152 (51%), Positives = 103/152 (67%), Gaps = 11/152 (7%)

Query: 10  LIPMHKRSKS--FPNKRTVEEDNSDDV--EALDRIKLDTGYLTECGEARKKPTRTNDVQC 65
           ++  HKRSKS  FP K+ VE D + +   EA  R+KLD G   E     K     ++ + 
Sbjct: 17  IVQNHKRSKSASFPEKKRVEGDKTSNSSHEASQRMKLDMGRSNES----KHNQYHSNTET 72

Query: 66  ALKQEILQLEKRLQDQFEVRCTLEKALGYRPT---FLVNPNEMAIPKPTAELIKEIAVLE 122
           +LKQEI  LE RLQDQF+VRC LEKALGYR      L   N++A+PKP  +LIK++AVLE
Sbjct: 73  SLKQEITHLETRLQDQFKVRCALEKALGYRTASSYVLTETNDIAMPKPATDLIKDVAVLE 132

Query: 123 LEVVYLEQHLLSLYRKAFDQQLSFVAPSTNEK 154
           +EV++LEQ+LLSLYRKAF+QQ+S V+P+   K
Sbjct: 133 MEVIHLEQYLLSLYRKAFEQQISSVSPNLENK 164


>AT5G66600.1 | Symbols:  | Protein of unknown function, DUF547 |
           chr5:26575105-26578315 REVERSE LENGTH=614
          Length = 614

 Score =  139 bits (349), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 78/152 (51%), Positives = 103/152 (67%), Gaps = 11/152 (7%)

Query: 10  LIPMHKRSKS--FPNKRTVEEDNSDDV--EALDRIKLDTGYLTECGEARKKPTRTNDVQC 65
           ++  HKRSKS  FP K+ VE D + +   EA  R+KLD G   E     K     ++ + 
Sbjct: 17  IVQNHKRSKSASFPEKKRVEGDKTSNSSHEASQRMKLDMGRSNES----KHNQYHSNTET 72

Query: 66  ALKQEILQLEKRLQDQFEVRCTLEKALGYRPT---FLVNPNEMAIPKPTAELIKEIAVLE 122
           +LKQEI  LE RLQDQF+VRC LEKALGYR      L   N++A+PKP  +LIK++AVLE
Sbjct: 73  SLKQEITHLETRLQDQFKVRCALEKALGYRTASSYVLTETNDIAMPKPATDLIKDVAVLE 132

Query: 123 LEVVYLEQHLLSLYRKAFDQQLSFVAPSTNEK 154
           +EV++LEQ+LLSLYRKAF+QQ+S V+P+   K
Sbjct: 133 MEVIHLEQYLLSLYRKAFEQQISSVSPNLENK 164


>AT5G66600.2 | Symbols:  | Protein of unknown function, DUF547 |
           chr5:26575105-26577954 REVERSE LENGTH=594
          Length = 594

 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/143 (51%), Positives = 97/143 (67%), Gaps = 9/143 (6%)

Query: 17  SKSFPNKRTVEEDNSDDV--EALDRIKLDTGYLTECGEARKKPTRTNDVQCALKQEILQL 74
           S SFP K+ VE D + +   EA  R+KLD G   E     K     ++ + +LKQEI  L
Sbjct: 6   SASFPEKKRVEGDKTSNSSHEASQRMKLDMGRSNES----KHNQYHSNTETSLKQEITHL 61

Query: 75  EKRLQDQFEVRCTLEKALGYRPT---FLVNPNEMAIPKPTAELIKEIAVLELEVVYLEQH 131
           E RLQDQF+VRC LEKALGYR      L   N++A+PKP  +LIK++AVLE+EV++LEQ+
Sbjct: 62  ETRLQDQFKVRCALEKALGYRTASSYVLTETNDIAMPKPATDLIKDVAVLEMEVIHLEQY 121

Query: 132 LLSLYRKAFDQQLSFVAPSTNEK 154
           LLSLYRKAF+QQ+S V+P+   K
Sbjct: 122 LLSLYRKAFEQQISSVSPNLENK 144


>AT5G66600.4 | Symbols:  | Protein of unknown function, DUF547 |
           chr5:26575105-26578315 REVERSE LENGTH=629
          Length = 629

 Score =  133 bits (335), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 74/148 (50%), Positives = 97/148 (65%), Gaps = 9/148 (6%)

Query: 12  PMHKRSKSFPNKRTVEEDNSDDV--EALDRIKLDTGYLTECGEARKKPTRTNDVQCALKQ 69
           P      SFP K+ VE D + +   EA  R+KLD G   E     K     ++ + +LKQ
Sbjct: 36  PEQDNDASFPEKKRVEGDKTSNSSHEASQRMKLDMGRSNES----KHNQYHSNTETSLKQ 91

Query: 70  EILQLEKRLQDQFEVRCTLEKALGYRPT---FLVNPNEMAIPKPTAELIKEIAVLELEVV 126
           EI  LE RLQDQF+VRC LEKALGYR      L   N++A+PKP  +LIK++AVLE+EV+
Sbjct: 92  EITHLETRLQDQFKVRCALEKALGYRTASSYVLTETNDIAMPKPATDLIKDVAVLEMEVI 151

Query: 127 YLEQHLLSLYRKAFDQQLSFVAPSTNEK 154
           +LEQ+LLSLYRKAF+QQ+S V+P+   K
Sbjct: 152 HLEQYLLSLYRKAFEQQISSVSPNLENK 179


>AT2G23700.1 | Symbols:  | Protein of unknown function, DUF547 |
           chr2:10076624-10079849 REVERSE LENGTH=707
          Length = 707

 Score =  125 bits (315), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 84/162 (51%), Positives = 109/162 (67%), Gaps = 17/162 (10%)

Query: 5   MGLEG---LIPMHKRSKS--FPNKRTVEEDNSDD--VEALDRIKLDTGYLTECG----EA 53
           MG E    L   HKRSKS   P K+ +E++NS D  ++A  R+KLD   L  CG    E 
Sbjct: 1   MGFEDKKMLRQRHKRSKSCTVPEKKKLEDENSIDSSLDASQRLKLD---LPRCGDKSFEM 57

Query: 54  RKKPTRTNDVQCALKQEILQLEKRLQDQFEVRCTLEKALGYR-PTFLVNPNEMAIPKPTA 112
           +K  +     + +LKQEI +LEKRLQ+QF+VR  LEKALGY+ P+  +  +  + PKP  
Sbjct: 58  KKDLSPDVKFKSSLKQEIQELEKRLQNQFDVRGALEKALGYKTPSRDIKGD--STPKPPT 115

Query: 113 ELIKEIAVLELEVVYLEQHLLSLYRKAFDQQLSFVAPSTNEK 154
           ELIKEIAVLELEV +LEQ+LLSLYRKAFDQQ S V+P T+++
Sbjct: 116 ELIKEIAVLELEVSHLEQYLLSLYRKAFDQQTSSVSPPTSKQ 157


>AT5G47380.1 | Symbols:  | Protein of unknown function, DUF547 |
           chr5:19221472-19224471 REVERSE LENGTH=618
          Length = 618

 Score = 60.1 bits (144), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 12/143 (8%)

Query: 14  HKRSKSFPNKRTVEED-NSDDVEALDRIKLDTGYLTECGEARKKP-------TRTN---D 62
           H RSKS  ++R +    N     A +  ++    +      R KP       T+ N   +
Sbjct: 28  HGRSKSASSERDLHTSGNGASQSANNFTRMQASSVQTTANKRPKPLHNCQMLTKNNVSSN 87

Query: 63  VQCALKQEILQLEKRLQDQFEVRCTLEKALGYRPTFLVNPNEMAIPKPTAELIKEIAVLE 122
            + +L++++ QL  RLQ +  +R  LE+A+G R +  ++P          ELI EI +LE
Sbjct: 88  DRASLERDVEQLHLRLQQEKSMRMVLERAMG-RASSSLSPGHRHFAGQANELITEIELLE 146

Query: 123 LEVVYLEQHLLSLYRKAFDQQLS 145
            EV   E H+LSLYR  F+Q +S
Sbjct: 147 AEVTNREHHVLSLYRSIFEQTVS 169


>AT1G76620.1 | Symbols:  | Protein of unknown function, DUF547 |
           chr1:28756787-28759131 FORWARD LENGTH=527
          Length = 527

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/38 (60%), Positives = 34/38 (89%)

Query: 107 IPKPTAELIKEIAVLELEVVYLEQHLLSLYRKAFDQQL 144
           IPK + EL KEIA +E+E++++E++LLSLYRK+F+QQL
Sbjct: 76  IPKSSEELKKEIASIEIEILHMERYLLSLYRKSFEQQL 113


>AT1G21060.2 | Symbols:  | Protein of unknown function, DUF547 |
           chr1:7371799-7374085 FORWARD LENGTH=493
          Length = 493

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 33/44 (75%)

Query: 108 PKPTAELIKEIAVLELEVVYLEQHLLSLYRKAFDQQLSFVAPST 151
           PK + +L KEIA LE E++  EQ+LLSLYR AFD+Q+S  +P T
Sbjct: 50  PKSSEDLRKEIASLEFEILRTEQYLLSLYRTAFDEQVSSFSPHT 93


>AT1G21060.1 | Symbols:  | Protein of unknown function, DUF547 |
           chr1:7371799-7374085 FORWARD LENGTH=505
          Length = 505

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 33/44 (75%)

Query: 108 PKPTAELIKEIAVLELEVVYLEQHLLSLYRKAFDQQLSFVAPST 151
           PK + +L KEIA LE E++  EQ+LLSLYR AFD+Q+S  +P T
Sbjct: 62  PKSSEDLRKEIASLEFEILRTEQYLLSLYRTAFDEQVSSFSPHT 105