Miyakogusa Predicted Gene

Lj0g3v0207119.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0207119.2 tr|Q1KS95|Q1KS95_ARATH Protein prenyltransferase
alpha subunit-related OS=Arabidopsis thaliana
GN=At,64.81,0.00000000000003,PPTA,Protein prenyltransferase, alpha
subunit; seg,NULL; SUBFAMILY NOT NAMED,NULL; PROTEIN
FARNESYLT,CUFF.13263.2
         (158 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G10095.1 | Symbols:  | Protein prenylyltransferase superfamil...   142   8e-35

>AT1G10095.1 | Symbols:  | Protein prenylyltransferase superfamily
           protein | chr1:3297478-3300353 REVERSE LENGTH=420
          Length = 420

 Score =  142 bits (359), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 65/99 (65%), Positives = 79/99 (79%)

Query: 15  HSPKSEQAWNHRRWVIKSISTNCSNFKEILGKESELVEKIAERSKMNYRAWNHRCWLISY 74
           +SPKSE  W+HRRW+IK IS + S  +EI+ KESELVE I ERSKMNYRAW HRCWL+SY
Sbjct: 167 NSPKSESTWSHRRWIIKMISQSFSTLQEIITKESELVESIGERSKMNYRAWYHRCWLVSY 226

Query: 75  MTTGQVLDELKKSRSWAALHVADNCVFHYRQRLLQKIMD 113
           MT  QV+ EL KS+ WA LHVAD+  FHYR+RL+ KI++
Sbjct: 227 MTIEQVIQELNKSKRWAGLHVADSSCFHYRRRLMLKILE 265