Miyakogusa Predicted Gene

Lj0g3v0206779.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0206779.1 Non Chatacterized Hit- tr|C4J6G1|C4J6G1_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,34.93,1e-18,UNCHARACTERIZED,NULL; SERINE INCORPORATOR,TMS
membrane protein/tumour differentially expressed prote,CUFF.13239.1
         (310 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G33205.1 | Symbols:  | Serinc-domain containing serine and sp...   310   9e-85
AT3G24460.1 | Symbols:  | Serinc-domain containing serine and sp...   220   9e-58
AT4G13345.2 | Symbols: MEE55 | Serinc-domain containing serine a...   212   3e-55
AT4G13345.1 | Symbols: MEE55 | Serinc-domain containing serine a...   208   4e-54
AT3G06170.1 | Symbols:  | Serinc-domain containing serine and sp...   107   7e-24
AT1G16180.2 | Symbols:  | Serinc-domain containing serine and sp...    85   6e-17
AT1G16180.1 | Symbols:  | Serinc-domain containing serine and sp...    85   6e-17

>AT2G33205.1 | Symbols:  | Serinc-domain containing serine and
           sphingolipid biosynthesis protein |
           chr2:14070987-14073211 REVERSE LENGTH=422
          Length = 422

 Score =  310 bits (794), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 156/252 (61%), Positives = 185/252 (73%), Gaps = 9/252 (3%)

Query: 34  YAAERKKSLQARYYFGIIFLIMNLVAWFFRDYGQSLL--LPWVHYIKVCGNEGEDCFHSL 91
           Y  E+ KSL+ARY +G IFLI+NL AWF RDY Q  L  LP   Y+  CG EG  CFH+L
Sbjct: 39  YYQEKNKSLRARYTYGTIFLIINLCAWFIRDYAQKALALLP---YVSSCGPEGSRCFHTL 95

Query: 92  GVLRVSLGCHIFFLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFV 151
           GVLRVSLGC IF+ +MFL+T NT KL E +NSWHS  W  K  LL++ M   F  P  ++
Sbjct: 96  GVLRVSLGCFIFYFVMFLSTWNTMKLHEAQNSWHSDNWIFKFFLLVIVMVASFFIPQLYI 155

Query: 152 QIYGEIARIGAGIFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSMSTMFYVAAICG 211
           QIYGEIAR+GAGIFL LQLVSVI FITWWN YW P  + KQ CS GL MS +FY+ ++CG
Sbjct: 156 QIYGEIARVGAGIFLGLQLVSVIEFITWWNNYWMPQNQSKQSCSFGLVMSIVFYIGSVCG 215

Query: 212 VVYMYTSYASRSSCSLNIFFITWTAILLLVMMIISLNSKV-NRGLLSSGIMASYIVFLCW 270
           +  MY  Y + ++C LNIFFI+WT ILL+VMM+ISL+SKV NRGLLSSGIMASYIVFLCW
Sbjct: 216 IAVMYYFYGASTACGLNIFFISWTVILLIVMMVISLHSKVKNRGLLSSGIMASYIVFLCW 275

Query: 271 CAIRRLGFQPIH 282
            AIR    +P H
Sbjct: 276 SAIRS---EPSH 284


>AT3G24460.1 | Symbols:  | Serinc-domain containing serine and
           sphingolipid biosynthesis protein | chr3:8886160-8889717
           REVERSE LENGTH=409
          Length = 409

 Score =  220 bits (561), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 117/232 (50%), Positives = 153/232 (65%), Gaps = 4/232 (1%)

Query: 44  ARYYFGIIFLIMNLVAWFFRDYGQSLLLPWVHYIKVCGNEGEDCFHSLGVLRVSLGCHIF 103
           ARY +G+IFLI NL+AW  RDYG+  L   V   K C   GE+C  + GVLRVSLGC +F
Sbjct: 40  ARYVYGLIFLIANLLAWAARDYGRGALRK-VTRFKNC-KGGENCLGTDGVLRVSLGCFLF 97

Query: 104 FLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIARIGAG 163
           + +MFL+T+ T K    R+ WHSGWW +K I+      +PFL PS  + +YGEIA  GAG
Sbjct: 98  YFVMFLSTLGTSKTHSSRDRWHSGWWFVKLIMWPALTIIPFLLPSSIIHLYGEIAHFGAG 157

Query: 164 IFLLLQLVSVIHFITWWNKYWTPDEERKQRCSV-GLSMSTMFYVAAICGVVYMYTSYASR 222
           +FLL+QL+SVI FI W N+ +   ++  +RC V  + +ST  Y   I GV+ MY  YA  
Sbjct: 158 VFLLIQLISVISFIQWLNECYQSQKD-AERCRVYVMLLSTTSYTVCIVGVILMYIWYAPD 216

Query: 223 SSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASYIVFLCWCAIR 274
           SSC LNIFFITWT  L+ +M  I+L+ KVN G L+  +M  Y+VF+CWCAIR
Sbjct: 217 SSCLLNIFFITWTLFLIQLMTSIALHPKVNAGYLTPALMGLYVVFICWCAIR 268


>AT4G13345.2 | Symbols: MEE55 | Serinc-domain containing serine and
           sphingolipid biosynthesis protein | chr4:7767292-7769426
           FORWARD LENGTH=394
          Length = 394

 Score =  212 bits (539), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/239 (49%), Positives = 154/239 (64%), Gaps = 7/239 (2%)

Query: 44  ARYYFGIIFLIMNLVAWFFRDYGQSLLLPWVHYIKVCGNEGEDCFHSLGVLRVSLGCHIF 103
           ARY +G+IFL+ NL+AW  RDYG+  L   +   K C  EG DC  + GVLRVS GC +F
Sbjct: 33  ARYVYGLIFLLANLLAWALRDYGRGALTE-MRKFKNC-KEGGDCLGTEGVLRVSFGCFLF 90

Query: 104 FLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIARIGAG 163
           + IMFL+TV T K    R+ WHSGWW  K  +LL     PFL PS  +Q YGEIA  GAG
Sbjct: 91  YFIMFLSTVGTSKTHSSRDKWHSGWWFAKLFMLLGLTIFPFLLPSSIIQFYGEIAHFGAG 150

Query: 164 IFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSM-STMFYVAAICGVVYMYTSYASR 222
           +FLL+QL+S+I FITW N+ +   ++  +RC V + + +T  Y   I GV+ MY  Y   
Sbjct: 151 VFLLIQLISIISFITWLNECFQAQKD-AERCHVHVMLLATTAYTVCILGVILMYIWYVPE 209

Query: 223 SSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASYIVFLCWCAIRRLGFQPI 281
            SC LNIFFITWT  L+ +M  ISL+ K+N G L+  +M  Y+VF+CWCAIRR   QP+
Sbjct: 210 PSCLLNIFFITWTLFLIQLMTSISLHPKINAGFLTPALMGLYVVFICWCAIRR---QPV 265


>AT4G13345.1 | Symbols: MEE55 | Serinc-domain containing serine and
           sphingolipid biosynthesis protein | chr4:7767292-7769426
           FORWARD LENGTH=394
          Length = 394

 Score =  208 bits (530), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 116/232 (50%), Positives = 150/232 (64%), Gaps = 4/232 (1%)

Query: 44  ARYYFGIIFLIMNLVAWFFRDYGQSLLLPWVHYIKVCGNEGEDCFHSLGVLRVSLGCHIF 103
           ARY +G+IFL+ NL+AW  RDYG+  L   +   K C  EG DC  + GVLRVS GC +F
Sbjct: 33  ARYVYGLIFLLANLLAWALRDYGRGALTE-MRKFKNC-KEGGDCLGTEGVLRVSFGCFLF 90

Query: 104 FLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIARIGAG 163
           + IMFL+TV T K    R+ WHSGWW  K  +LL     PFL PS  +Q YGEIA  GAG
Sbjct: 91  YFIMFLSTVGTSKTHSSRDKWHSGWWFAKLFMLLGLTIFPFLLPSSIIQFYGEIAHFGAG 150

Query: 164 IFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSM-STMFYVAAICGVVYMYTSYASR 222
           +FLL+QL+S+I FITW N+ +   ++  +RC V + + +T  Y   I GV+ MY  Y   
Sbjct: 151 VFLLIQLISIISFITWLNECFQAQKD-AERCHVHVMLLATTAYTVCILGVILMYIWYVPE 209

Query: 223 SSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASYIVFLCWCAIR 274
            SC LNIFFITWT  L+ +M  ISL+ K+N G L+  +M  Y+VF+CWCAIR
Sbjct: 210 PSCLLNIFFITWTLFLIQLMTSISLHPKINAGFLTPALMGLYVVFICWCAIR 261


>AT3G06170.1 | Symbols:  | Serinc-domain containing serine and
           sphingolipid biosynthesis protein | chr3:1867520-1869738
           FORWARD LENGTH=409
          Length = 409

 Score =  107 bits (268), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 125/235 (53%), Gaps = 9/235 (3%)

Query: 43  QARYYFGIIFLIMNLVAWFFRDYGQSLL--LPWVHYIKVCGNEGEDCFHSLGVLRVSLGC 100
            AR  +  +F    +V+W  R+ G  LL  LPW   I    +  ++ +    VLRVS G 
Sbjct: 28  SARIAYCGLFGASLVVSWILRETGAPLLEKLPW---INTSDSYTKEWYQQQAVLRVSFGN 84

Query: 101 HIFFLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIARI 160
            +FF I  L  +  +   + R+SWH G W LK I+  + + L F  P+  V +YG +++ 
Sbjct: 85  FLFFAIYALIMIGVKDQNDRRDSWHHGGWGLKMIVWFLLVVLMFFVPNVIVSLYGTLSKF 144

Query: 161 GAGIFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSMSTMFYVA--AICGVVYMYTS 218
           GAG FLL+Q+V ++     WN  W   +E+K   ++ L +S + Y+A     G+++++ +
Sbjct: 145 GAGAFLLVQVVLLLDATHNWNDSWVEKDEKKWYIAL-LVISIVCYIATYTFSGILFIWFN 203

Query: 219 YASRSSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASYIVFLCWCAI 273
             S   C LN+FFI    IL  V  II+L+  VN  LL + +++ Y  ++C+  +
Sbjct: 204 -PSGQDCGLNVFFIVMPMILAFVFAIIALHPAVNGSLLPASVISVYCAYVCYTGL 257


>AT1G16180.2 | Symbols:  | Serinc-domain containing serine and
           sphingolipid biosynthesis protein | chr1:5540905-5542670
           FORWARD LENGTH=412
          Length = 412

 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 120/234 (51%), Gaps = 6/234 (2%)

Query: 43  QARYYFGIIFLIMNLVAWFFRDYGQSLL--LPWVHYIKVCGNEGEDCFHSLGVLRVSLGC 100
            AR  +  +F +  +V+W  R+    L+  LPW+++         + F +  VLRVSLG 
Sbjct: 30  SARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFH--KTPDREWFETDAVLRVSLGN 87

Query: 101 HIFFLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIARI 160
            +FF I+ +  +  +   + R+  H G W +K I   + +   F  P+E +  Y  +++ 
Sbjct: 88  FLFFSILSVMMIGVKNQKDPRDGIHHGGWMMKIICWCILVIFMFFLPNEIISFYESMSKF 147

Query: 161 GAGIFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSMSTMFYVAAICGVVYMYTSY- 219
           GAG FLL+Q+V ++ F+  WN  W   +E+    ++ L +S + Y+A      +++  + 
Sbjct: 148 GAGFFLLVQVVLLLDFVHGWNDTWVGYDEQFWYAAL-LVVSLVCYLATFVFSGFLFHWFT 206

Query: 220 ASRSSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASYIVFLCWCAI 273
            S   C LN FFI  T I + V  I+ L+  V   +L + +++ Y ++LC+  +
Sbjct: 207 PSGHDCGLNTFFIIMTLIFVFVFAIVVLHPTVGGSILPASVISLYCMYLCYSGL 260


>AT1G16180.1 | Symbols:  | Serinc-domain containing serine and
           sphingolipid biosynthesis protein | chr1:5540905-5542670
           FORWARD LENGTH=412
          Length = 412

 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 120/234 (51%), Gaps = 6/234 (2%)

Query: 43  QARYYFGIIFLIMNLVAWFFRDYGQSLL--LPWVHYIKVCGNEGEDCFHSLGVLRVSLGC 100
            AR  +  +F +  +V+W  R+    L+  LPW+++         + F +  VLRVSLG 
Sbjct: 30  SARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFH--KTPDREWFETDAVLRVSLGN 87

Query: 101 HIFFLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIARI 160
            +FF I+ +  +  +   + R+  H G W +K I   + +   F  P+E +  Y  +++ 
Sbjct: 88  FLFFSILSVMMIGVKNQKDPRDGIHHGGWMMKIICWCILVIFMFFLPNEIISFYESMSKF 147

Query: 161 GAGIFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSMSTMFYVAAICGVVYMYTSY- 219
           GAG FLL+Q+V ++ F+  WN  W   +E+    ++ L +S + Y+A      +++  + 
Sbjct: 148 GAGFFLLVQVVLLLDFVHGWNDTWVGYDEQFWYAAL-LVVSLVCYLATFVFSGFLFHWFT 206

Query: 220 ASRSSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASYIVFLCWCAI 273
            S   C LN FFI  T I + V  I+ L+  V   +L + +++ Y ++LC+  +
Sbjct: 207 PSGHDCGLNTFFIIMTLIFVFVFAIVVLHPTVGGSILPASVISLYCMYLCYSGL 260