Miyakogusa Predicted Gene
- Lj0g3v0206599.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0206599.1 Non Chatacterized Hit- tr|B9T3T5|B9T3T5_RICCO
Pentatricopeptide repeat-containing protein, putative
,25.42,2e-18,PPR,Pentatricopeptide repeat; seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PPR: pentat,CUFF.13218.1
(444 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 2e-86
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 8e-86
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 2e-84
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 308 4e-84
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 305 4e-83
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 304 1e-82
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 293 2e-79
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 291 5e-79
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 6e-78
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 8e-75
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 7e-74
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 274 9e-74
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 1e-73
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 271 6e-73
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 8e-73
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 267 9e-72
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 1e-71
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 266 2e-71
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 263 2e-70
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 4e-70
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 261 5e-70
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 258 5e-69
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 5e-69
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 4e-68
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 254 7e-68
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 254 7e-68
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 253 2e-67
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 6e-67
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 6e-67
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 251 7e-67
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 9e-67
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 2e-66
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 2e-66
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 249 3e-66
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 4e-65
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 245 5e-65
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 244 8e-65
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 243 2e-64
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 3e-64
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 5e-64
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 6e-64
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 7e-64
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 9e-64
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 2e-63
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 2e-63
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 2e-63
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 7e-63
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 7e-63
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 8e-63
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 4e-62
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 6e-62
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 7e-62
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 8e-62
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 233 1e-61
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 232 3e-61
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 3e-61
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 232 4e-61
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 4e-61
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 231 8e-61
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 2e-60
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 3e-60
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 4e-60
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 4e-60
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 7e-60
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 2e-59
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 225 4e-59
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 5e-59
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 1e-58
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 4e-58
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 6e-58
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 6e-58
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 7e-58
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 7e-58
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 1e-57
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 2e-57
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 5e-57
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 7e-57
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 4e-56
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 1e-55
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 3e-55
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 3e-55
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 212 4e-55
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 4e-55
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 9e-55
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 2e-54
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 209 3e-54
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 5e-54
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 208 5e-54
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 8e-54
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 8e-54
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 9e-54
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 1e-53
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 2e-53
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 3e-53
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 4e-53
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 4e-53
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 6e-53
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 7e-53
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 204 7e-53
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 204 9e-53
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 2e-52
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 203 2e-52
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 7e-52
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 7e-52
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 8e-52
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 8e-52
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 2e-51
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 3e-51
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 198 7e-51
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 8e-51
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 8e-51
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 198 8e-51
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 4e-50
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 5e-50
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 195 5e-50
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 7e-50
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 7e-50
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 9e-50
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 3e-49
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 6e-49
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 8e-49
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 9e-49
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 9e-49
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 1e-48
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 1e-48
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 2e-48
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 189 3e-48
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 4e-48
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 6e-48
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 6e-48
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 8e-48
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 2e-47
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 2e-47
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 8e-47
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 4e-46
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 6e-46
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 180 2e-45
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 179 5e-45
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 176 4e-44
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 5e-44
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 7e-43
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 159 5e-39
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 4e-38
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 155 8e-38
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 3e-35
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 3e-33
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 4e-33
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 7e-32
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 9e-25
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 1e-23
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 3e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 104 1e-22
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 103 3e-22
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 8e-22
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 9e-21
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 5e-20
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 1e-19
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 94 2e-19
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 4e-19
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 7e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 88 1e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 88 1e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 88 1e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 86 8e-17
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 81 1e-15
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 80 3e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 5e-15
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 79 8e-15
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 77 2e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 8e-12
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 4e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 7e-11
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 65 1e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 64 2e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 63 4e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 63 4e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 62 6e-10
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 62 8e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 61 2e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 60 2e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 60 3e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 59 5e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 59 5e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 57 3e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 55 8e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 2e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 53 4e-07
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 52 8e-07
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 316 bits (809), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 163/420 (38%), Positives = 260/420 (61%), Gaps = 4/420 (0%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAV 67
V DA LF+ D VS+NSM+ G VK GE AR+LFDEMP RD+ +WN M+ GY
Sbjct: 170 VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARC 229
Query: 68 GDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP--ARNVVSWNSMLAL 125
++ A ELFE+MP+R+ VSW+ M+ G + G++ +A F++MP A+NVV+W ++A
Sbjct: 230 REMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAG 289
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV 185
+ E ++ D+M+ SG + A ++S+L AC G LS+GM +HS +K +N+
Sbjct: 290 YAEKGLLKEADRLVDQMVASGLKF-DAAAVISILAACTESGLLSLGMRIHSILKRSNLGS 348
Query: 186 DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEME 245
+ + LL MY KCG + A DVF+++P +++VSWN+M+ G G+HG+G++A+ELF M
Sbjct: 349 NAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMR 408
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
++G +P+ TF+ VL +C HAG++ EG YF M +VY++ P+VEHYGC+VDLL R G +
Sbjct: 409 REGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRL 468
Query: 306 KNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNT 365
K + ++++ + ++ C H + ++ + V L++L+P D G Y +LSN
Sbjct: 469 KEAIKVVQTMPME-PNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNI 527
Query: 366 YAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
YAA W+ V +R ++ G++K + +S V LED ++ V + S + +Y ML L
Sbjct: 528 YAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 135/321 (42%), Gaps = 81/321 (25%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHV------------------------------- 34
G + DAR LFD DL+S+N+M+DG+
Sbjct: 199 GELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYS 258
Query: 35 KNGETGAARKLFDEMPV--RDVWNWNCMIAGYVAVGDLEAANELFERMP----------- 81
K G+ AR +FD+MP+ ++V W +IAGY G L+ A+ L ++M
Sbjct: 259 KAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAV 318
Query: 82 ----------------------------DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
+ N ++D + GN+ A + FN +P
Sbjct: 319 ISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK 378
Query: 114 RNVVSWNSM---LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
+++VSWN+M L +H K E +++F M G P++ T ++VL +C H G +
Sbjct: 379 KDLVSWNTMLHGLGVHGHGK---EAIELFSRMRREG-IRPDKVTFIAVLCSCNHAGLIDE 434
Query: 171 GM-WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGY 228
G+ + +S K ++ V CL+ + + G + A V MP+ NVV W +++
Sbjct: 435 GIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGAC 494
Query: 229 GLHGNGEKALELFLEMEKKGP 249
+H + A E+ + K P
Sbjct: 495 RMHNEVDIAKEVLDNLVKLDP 515
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 41/243 (16%)
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
LA+ FN++ NV NS++ H + ++ +F EM G N T +L AC
Sbjct: 69 LAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADN-FTYPFLLKAC 127
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDL----------------- 205
+ L V +H+ I+ + D+ + L+ Y +CG + +
Sbjct: 128 SGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS 187
Query: 206 ----------------ARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP 249
AR +FDEMP R+++SWN+M+ GY KA ELF +M P
Sbjct: 188 WNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKM----P 243
Query: 250 KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSE 309
+ N ++ ++ + AG + FD M V + I+ A GL+K ++
Sbjct: 244 ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAK---NVVTWTIIIAGYAEKGLLKEAD 300
Query: 310 ELI 312
L+
Sbjct: 301 RLV 303
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 314 bits (805), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 161/438 (36%), Positives = 260/438 (59%), Gaps = 4/438 (0%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ G++ +AR LFD S D+ ++ +M+ G+++N AR+LFD+MP R+ +WN M+
Sbjct: 260 YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAML 319
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
AGYV +E A ELF+ MP R+V +WN MI G + G + A F++MP R+ VSW +
Sbjct: 320 AGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAA 379
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
M+A + ++ +E L++F +M G + N ++ S L+ CA + L +G +H +
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRL-NRSSFSSALSTCADVVALELGKQLHGRLVKG 438
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
+ + LL MY KCG+++ A D+F EM +++VSWN+MI GY HG GE AL F
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFF 498
Query: 242 LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLAR 301
M+++G KP+DAT V VLSAC+H G+V +G YF M + Y + P +HY C+VDLL R
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGR 558
Query: 302 AGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIM 361
AGL++++ L+K + + H ++EL E A ++ +EP + G Y++
Sbjct: 559 AGLLEDAHNLMKNMPFEPDAAIWGTLLGAS-RVHGNTELAETAADKIFAMEPENSGMYVL 617
Query: 362 LSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSM 421
LSN YA+ GRW DV ++RV +R+KG++K S + +++ + V + K +++
Sbjct: 618 LSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAF 677
Query: 422 LSELGAHIKLSPAGSIEK 439
L EL +++ AG + K
Sbjct: 678 LEEL--DLRMKKAGYVSK 693
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 167/313 (53%), Gaps = 22/313 (7%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y GR ++A +F VSYN MI G+++NGE ARKLFDEMP RD+ +WN MI
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMI 133
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
GYV +L A ELFE MP+RDV SWN M+ G + G V A F+RMP +N VSWN+
Sbjct: 134 KGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNA 193
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
+L+ +V+ E +F ++ N A LVS K + F S
Sbjct: 194 LLSAYVQNSKMEEACMLF-------KSRENWA-LVSWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
N++ DV+ ++T Y + G +D AR +FDE PV++V +W +M+ GY + E+A ELF
Sbjct: 246 NVR-DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF 304
Query: 242 LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP--KVEHYGCIVDLL 299
+M P+ N+ ++ +L+ G ME + + ++++ P V + ++
Sbjct: 305 DKM----PERNEVSWNAMLAGYVQ-GERME------MAKELFDVMPCRNVSTWNTMITGY 353
Query: 300 ARAGLVKNSEELI 312
A+ G + ++ L
Sbjct: 354 AQCGKISEAKNLF 366
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 134/259 (51%), Gaps = 15/259 (5%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D+ +N I +++ G A ++F MP ++N MI+GY+ G+ E A +LF+ MP
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
+RD+VSWN MI G VR N+ A E F MP R+V SWN+ML+ + + + +FD
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLS-TCLLTMYVKC 200
M E N+ + ++L+A K+ + F N L+S CLL +VK
Sbjct: 183 MPEK-----NDVSWNALLSAYVQNSKMEEACML--FKSRENW---ALVSWNCLLGGFVKK 232
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
+ AR FD M VR+VVSWN++I GY G ++A +LF E P + T+ ++
Sbjct: 233 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMV 288
Query: 261 SACTHAGMVMEGWWYFDLM 279
S MV E FD M
Sbjct: 289 SGYIQNRMVEEARELFDKM 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 18/237 (7%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D D+ WN I +R G AL F RMP + VS+N M++ ++R F K+FDE
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M E N ++ +LGK + + DV +L+ Y + G
Sbjct: 121 MPERDLVSWN--VMIKGYVRNRNLGKARELFEIMP-------ERDVCSWNTMLSGYAQNG 171
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+D AR VFD MP +N VSWN+++ Y + E+A LF E ++ C+L
Sbjct: 172 CVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLG 227
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
++E +FD M N+ V + I+ A++G + + +L V+
Sbjct: 228 GFVKKKKIVEARQFFDSM----NVRDVVS-WNTIITGYAQSGKIDEARQLFDESPVQ 279
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 309 bits (792), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 250/426 (58%), Gaps = 2/426 (0%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
M + G ++ A +F + ++V + SMI+G++ N + +AR+ FD P RD+ WN M
Sbjct: 37 MLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTM 96
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWN 120
I+GY+ +G++ A LF++MP RDV+SWN +++G +G++ F+ MP RNV SWN
Sbjct: 97 ISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWN 156
Query: 121 SMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS 180
++ + + E L F M++ G VPN+AT+ VL+ACA LG G WVH + ++
Sbjct: 157 GLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGET 216
Query: 181 NNI-KVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
KVDV + L+ MY KCGA+++A +VF + R+++SWN+MI G HG+G +AL
Sbjct: 217 LGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALN 276
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
LF EM+ G P+ TFV VL AC H G+V +G YF+ M ++I P++EH GC+VDLL
Sbjct: 277 LFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLL 336
Query: 300 ARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPY 359
+RAG + + E I + VK + ++GE+ + LI+LEP + +
Sbjct: 337 SRAGFLTQAVEFINKMPVKADAVIWATLLGAS-KVYKKVDIGEVALEELIKLEPRNPANF 395
Query: 360 IMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMY 419
+MLSN Y GR+DD R++V +R+ G +KEA S + +D K++ R +
Sbjct: 396 VMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQ 455
Query: 420 SMLSEL 425
+L EL
Sbjct: 456 RILREL 461
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 308 bits (790), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/430 (36%), Positives = 256/430 (59%), Gaps = 4/430 (0%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP-VRDVWNWNC 59
MY+ FG++ AR FD VS+ ++I G+++ GE A KLFD+MP V+DV +N
Sbjct: 122 MYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNA 181
Query: 60 MIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
M+ G+V GD+ +A LF+ M + V++W MI G + ++ A + F+ MP RN+VSW
Sbjct: 182 MMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSW 241
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
N+M+ + + K E +++F EM + P++ T++SVL A + G LS+G W H F++
Sbjct: 242 NTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQ 301
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
+ V + T +L MY KCG ++ A+ +FDEMP + V SWN+MI GY L+GN AL+
Sbjct: 302 RKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALD 361
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
LF+ M + KP++ T + V++AC H G+V EG +F +MR + + K+EHYGC+VDLL
Sbjct: 362 LFVTMMIE-EKPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLL 419
Query: 300 ARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPY 359
RAG +K +E+LI + + C + D E E + K+ +ELEP + G Y
Sbjct: 420 GRAGSLKEAEDLITNMPFE-PNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNY 478
Query: 360 IMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMY 419
++L N YAA RWDD V+ ++R+ +KE S++ + S++ + + +R ++
Sbjct: 479 VLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIH 538
Query: 420 SMLSELGAHI 429
+L +L H+
Sbjct: 539 LVLGDLLMHM 548
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 136/315 (43%), Gaps = 51/315 (16%)
Query: 40 GAARKLFDEMPVR-DVWNWNCMIAGYVAVGDLEAANELFERM-------PDR---DVVSW 88
G ARKLFD+ P R D + N MI Y+ + L+ + PD ++
Sbjct: 27 GYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTK 86
Query: 89 NCMIDGCV------------------------------RVGNVPLALEFFNRMPARNVVS 118
+C + CV + G + A F+ MP R+ VS
Sbjct: 87 SCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVS 146
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
W ++++ ++R K+FD+M + V A + + + G ++ + +
Sbjct: 147 WTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKS----GDMTSARRLFDEM 202
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
V+ T ++ Y +D AR +FD MP RN+VSWN+MI GY + ++ +
Sbjct: 203 THKT----VITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGI 258
Query: 239 ELFLEMEKKGP-KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVD 297
LF EM+ P+D T + VL A + G + G W ++R ++ KV+ I+D
Sbjct: 259 RLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQR-KKLDKKVKVCTAILD 317
Query: 298 LLARAGLVKNSEELI 312
+ ++ G ++ ++ +
Sbjct: 318 MYSKCGEIEKAKRIF 332
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Query: 101 VPLALEFFNRMPARN-VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
+ A + F++ P R+ NSM+ ++ + + + ++ ++ + P+ T ++
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 160 TACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVV 219
+C+ + G+ +HS I D+ +ST ++ MY K G M AR+ FDEMP R+ V
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 220 SWNSMIMGYGLHGNGEKALELFLEM 244
SW ++I GY G + A +LF +M
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQM 170
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 259/446 (58%), Gaps = 35/446 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFD------------- 47
+Y G + +R +FD D VSYNSMIDG+VK G +AR+LFD
Sbjct: 165 LYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWN 224
Query: 48 ---------------------EMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
+MP +D+ +WN MI GYV G +E A LF+ MP RDVV
Sbjct: 225 SMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVV 284
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
+W MIDG ++G V A F++MP R+VV++NSM+A +V+ K E L++F +M +
Sbjct: 285 TWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKES 344
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
+P++ TLV VL A A LG+LS + +H +I + L L+ MY KCG++ A
Sbjct: 345 HLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHA 404
Query: 207 RDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHA 266
VF+ + +++ WN+MI G +HG GE A ++ L++E+ KP+D TFV VL+AC+H+
Sbjct: 405 MLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHS 464
Query: 267 GMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXX 326
G+V EG F+LMRR + IEP+++HYGC+VD+L+R+G ++ ++ LI+ + V+
Sbjct: 465 GLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVE-PNDVIWR 523
Query: 327 XXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKG 386
C+ H + E GE+VAK LI + Y++LSN YA+ G W DV RVR M++E+
Sbjct: 524 TFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERK 583
Query: 387 LQKEAASSVVHLEDFESKYFVKNYSV 412
++K S + L+ ++FV + V
Sbjct: 584 IEKIPGCSWIELDGRVHEFFVDSIEV 609
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 119/219 (54%), Gaps = 13/219 (5%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
D++ NC+I Y+ G L + ++F+RMP RD VS+N MIDG V+ G + A E F+ MP
Sbjct: 155 DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMP 214
Query: 113 --ARNVVSWNSMLALHVRAKSFWECL-KMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
+N++SWNSM++ + + + K+F +M E N S++ G++
Sbjct: 215 MEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWN-----SMIDGYVKHGRIE 269
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
+ + + DV+ ++ Y K G + A+ +FD+MP R+VV++NSM+ GY
Sbjct: 270 DAKGLFDVMP----RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYV 325
Query: 230 LHGNGEKALELFLEMEKKGP-KPNDATFVCVLSACTHAG 267
+ +ALE+F +MEK+ P+D T V VL A G
Sbjct: 326 QNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG 364
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
WN+++ H K + L + M+E+G +V ++ +L VL AC+ LG + GM +H F+
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSV-DKFSLSLVLKACSRLGFVKGGMQIHGFL 147
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
K + D+ L CL+ +Y+KCG + L+R +FD MP R+ VS+NSMI GY G A
Sbjct: 148 KKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAR 207
Query: 239 ELF--LEMEKK 247
ELF + ME K
Sbjct: 208 ELFDLMPMEMK 218
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/466 (35%), Positives = 259/466 (55%), Gaps = 43/466 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY GR+ DA +FD S D+VSY ++I G+ G A+KLFDE+PV+DV +WN M
Sbjct: 178 MYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAM 237
Query: 61 IAGYVAVGDLEAANELFERM------PD--------------------RDVVSW------ 88
I+GY G+ + A ELF+ M PD R V W
Sbjct: 238 ISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF 297
Query: 89 -------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
N +ID + G + A F R+P ++V+SWN+++ + + E L +F E
Sbjct: 298 GSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQE 357
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI--KSNNIKVDVLLSTCLLTMYVK 199
M+ SGE PN+ T++S+L ACAHLG + +G W+H +I + + L T L+ MY K
Sbjct: 358 MLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAK 416
Query: 200 CGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCV 259
CG ++ A VF+ + +++ SWN+MI G+ +HG + + +LF M K G +P+D TFV +
Sbjct: 417 CGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGL 476
Query: 260 LSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKX 319
LSAC+H+GM+ G F M + Y + PK+EHYGC++DLL +GL K +EE+I +
Sbjct: 477 LSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMIN-MMEME 535
Query: 320 XXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVR 379
C H + ELGE A+ LI++EP + G Y++LSN YA+ GRW++V + R
Sbjct: 536 PDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTR 595
Query: 380 VMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
++ +KG++K S + ++ ++ + + R R +Y ML E+
Sbjct: 596 ALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 641
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 37/339 (10%)
Query: 21 LDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM 80
LDL + S+I +V+NG A K+FD+ P RDV ++ +I GY + G +E A +LF+ +
Sbjct: 167 LDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEI 226
Query: 81 PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
P +DVVSWN MI G GN ALE F M NV
Sbjct: 227 PVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV------------------------ 262
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
P+E+T+V+V++ACA G + +G VH +I + ++ + L+ +Y KC
Sbjct: 263 --------RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC 314
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
G ++ A +F+ +P ++V+SWN++I GY ++AL LF EM + G PND T + +L
Sbjct: 315 GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 374
Query: 261 SACTHAGMVMEGWW---YFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSV 317
AC H G + G W Y D +R+ + ++D+ A+ G ++ + ++ +
Sbjct: 375 PACAHLGAIDIGRWIHVYID--KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILH 432
Query: 318 KXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDI 356
K D+ R I ++P DI
Sbjct: 433 KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDI 471
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 105/216 (48%), Gaps = 35/216 (16%)
Query: 91 MIDGCV---RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGE 147
+I+ C+ +P A+ F + N++ WN+M H + LK++ M+ G
Sbjct: 71 LIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLG- 129
Query: 148 AVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA- 206
+PN T VL +CA G +H + +D+ + T L++MYV+ G ++ A
Sbjct: 130 LLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAH 189
Query: 207 --------RDV----------------------FDEMPVRNVVSWNSMIMGYGLHGNGEK 236
RDV FDE+PV++VVSWN+MI GY GN ++
Sbjct: 190 KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKE 249
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
ALELF +M K +P+++T V V+SAC +G + G
Sbjct: 250 ALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 293 bits (749), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/396 (38%), Positives = 232/396 (58%), Gaps = 3/396 (0%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
GRV +AR +FD ++++ +M+ G+ +N ARK+FD MP + +W M+ GYV
Sbjct: 186 GRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYV 245
Query: 66 AVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLAL 125
G +E A ELFE MP + V++ N MI G + G + A F+ M RN SW +++ +
Sbjct: 246 QNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKI 305
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV 185
H R E L +F M + G P TL+S+L+ CA L L G VH+ + V
Sbjct: 306 HERNGFELEALDLFILMQKQG-VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV 364
Query: 186 DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEME 245
DV +++ L+TMY+KCG + ++ +FD P ++++ WNS+I GY HG GE+AL++F EM
Sbjct: 365 DVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMP 424
Query: 246 KKGP-KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
G KPN+ TFV LSAC++AGMV EG ++ M V+ ++P HY C+VD+L RAG
Sbjct: 425 LSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGR 484
Query: 305 VKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSN 364
+ E+I ++V+ C TH ++ E AK+LIE+EP + G YI+LSN
Sbjct: 485 FNEAMEMIDSMTVE-PDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSN 543
Query: 365 TYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
YA+QGRW DV +R +++ + ++K S +E+
Sbjct: 544 MYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVEN 579
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 148/282 (52%), Gaps = 21/282 (7%)
Query: 3 SVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIA 62
S G++ +AR LFDS + + S+NSM+ G+ N ARKLFDEMP R++ +WN +++
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVS 87
Query: 63 GYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
GY+ G+++ A ++F+ MP+R+VVSW ++ G V G V +A F +MP +N VSW M
Sbjct: 88 GYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVM 147
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATL--VSVLTACAHLGKLSVGMWVHSFIKS 180
L ++ + K++ E +P++ + S++ G++ + +
Sbjct: 148 LIGFLQDGRIDDACKLY-------EMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSE 200
Query: 181 NNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALEL 240
+ V+ T ++T Y + +D AR +FD MP + VSW SM+MGY +G E A EL
Sbjct: 201 RS----VITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEEL 256
Query: 241 FLEMEKKGPKPNDATFVC--VLSACTHAGMVMEGWWYFDLMR 280
F M P C ++S G + + FD M+
Sbjct: 257 FEVM------PVKPVIACNAMISGLGQKGEIAKARRVFDSMK 292
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 138/294 (46%), Gaps = 40/294 (13%)
Query: 10 DARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGD 69
DAR LFD +++S+N ++ G++KNGE ARK+FD MP R+V +W ++ GYV G
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGK 125
Query: 70 LEAANELF-------------------------------ERMPDRDVVSWNCMIDGCVRV 98
++ A LF E +PD+D ++ MI G +
Sbjct: 126 VDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKE 185
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
G V A E F+ M R+V++W +M+ + + + K+FD M E E + S+
Sbjct: 186 GRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK-----TEVSWTSM 240
Query: 159 LTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
L G++ + + V+ +++ + G + AR VFD M RN
Sbjct: 241 LMGYVQNGRIEDAEELFEVMPVK----PVIACNAMISGLGQKGEIAKARRVFDSMKERND 296
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
SW ++I + +G +AL+LF+ M+K+G +P T + +LS C + G
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHG 350
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 131/262 (50%), Gaps = 13/262 (4%)
Query: 18 SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELF 77
S T+ + N I + G+ ARKLFD + + +WN M+AGY A A +LF
Sbjct: 12 STTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLF 71
Query: 78 ERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLK 137
+ MPDR+++SWN ++ G ++ G + A + F+ MP RNVVSW +++ +V
Sbjct: 72 DEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAES 131
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMY 197
+F +M E N+ + +L G++ ++ I D + T ++
Sbjct: 132 LFWKMPEK-----NKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGL 182
Query: 198 VKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
K G +D AR++FDEM R+V++W +M+ GYG + + A ++F M P+ + ++
Sbjct: 183 CKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTEVSWT 238
Query: 258 CVLSACTHAGMVMEGWWYFDLM 279
+L G + + F++M
Sbjct: 239 SMLMGYVQNGRIEDAEELFEVM 260
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 291 bits (746), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 215/363 (59%), Gaps = 1/363 (0%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L S L D+ N++++ + ++G ARK+ D MPVRD +WN +++ Y+ G ++
Sbjct: 165 LFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDE 224
Query: 73 ANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSF 132
A LF+ M +R+V SWN MI G G V A E F+ MP R+VVSWN+M+ + +
Sbjct: 225 ARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCY 284
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
E L++F++M++ P+ TLVSVL+ACA LG LS G WVH +I + I+++ L+T
Sbjct: 285 NEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATA 344
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
L+ MY KCG +D A +VF R+V +WNS+I +HG G+ ALE+F EM +G KPN
Sbjct: 345 LVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPN 404
Query: 253 DATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
TF+ VLSAC H GM+ + F++M VY +EP +EHYGC+VDLL R G ++ +EEL+
Sbjct: 405 GITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELV 464
Query: 313 KYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRW 372
+ C E E +A RL+EL D Y +SN YA+ GRW
Sbjct: 465 NEIPAD-EASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRW 523
Query: 373 DDV 375
+ V
Sbjct: 524 EKV 526
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 48/253 (18%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
G V +AR LFD ++ S+N MI G+ G A+++FD MPVRDV +WN M+ Y
Sbjct: 220 GLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYA 279
Query: 66 AVGDLEAANELFERMPDRD--------VVS---------------W-------------- 88
VG E+F +M D +VS W
Sbjct: 280 HVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEG 339
Query: 89 ---NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM---LALHVRAKSFWECLKMFDEM 142
++D + G + ALE F R+V +WNS+ L++H K + L++F EM
Sbjct: 340 FLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGK---DALEIFSEM 396
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS-NNIKVDVLLSTCLLTMYVKCG 201
+ G PN T + VL+AC H+G L + + S ++ + C++ + + G
Sbjct: 397 VYEGFK-PNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMG 455
Query: 202 AMDLARDVFDEMP 214
++ A ++ +E+P
Sbjct: 456 KIEEAEELVNEIP 468
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 10/205 (4%)
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
V A NR+ + N + NS++ + + + L +F EM+ G P++ + VL
Sbjct: 89 TVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREML-LGPVFPDKYSFTFVL 147
Query: 160 TACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVV 219
ACA G +H + + DV + L+ +Y + G ++AR V D MPVR+ V
Sbjct: 148 KACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAV 207
Query: 220 SWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM 279
SWNS++ Y G ++A LF EME++ N ++ ++S AG+V E FD M
Sbjct: 208 SWNSLLSAYLEKGLVDEARALFDEMEER----NVESWNFMISGYAAAGLVKEAKEVFDSM 263
Query: 280 --RRVYNIEPKVE---HYGCIVDLL 299
R V + V H GC ++L
Sbjct: 264 PVRDVVSWNAMVTAYAHVGCYNEVL 288
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 288 bits (737), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 245/422 (58%), Gaps = 3/422 (0%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
GR+ +A LF+ D+VS+ +M+DG KNG+ AR+LFD MP R++ +WN MI GY
Sbjct: 185 GRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYA 244
Query: 66 AVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLAL 125
++ A++LF+ MP+RD SWN MI G +R + A F+RMP +NV+SW +M+
Sbjct: 245 QNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITG 304
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV 185
+V K E L +F +M+ G PN T VS+L+AC+ L L G +H I + +
Sbjct: 305 YVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQK 364
Query: 186 DVLLSTCLLTMYVKCGAMDLARDVFDEMPV--RNVVSWNSMIMGYGLHGNGEKALELFLE 243
+ ++++ LL MY K G + AR +FD V R+++SWNSMI Y HG+G++A+E++ +
Sbjct: 365 NEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQ 424
Query: 244 MEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
M K G KP+ T++ +L AC+HAG+V +G +F + R ++ + EHY C+VDL RAG
Sbjct: 425 MRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAG 484
Query: 304 LVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLS 363
+K+ I + C H + + + V K+++E D G Y+++S
Sbjct: 485 RLKDVTNFINCDDAR-LSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMS 543
Query: 364 NTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLS 423
N YAA G+ ++ +R+ ++EKGL+K+ S V + + V + S + + S+LS
Sbjct: 544 NIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILS 603
Query: 424 EL 425
+L
Sbjct: 604 DL 605
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 159/300 (53%), Gaps = 24/300 (8%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR-DVWNWNCMIAGY 64
G++++AR LFD D+V++ +I G++K G+ AR+LFD + R +V W M++GY
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGY 119
Query: 65 VAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLA 124
+ L A LF+ MP+R+VVSWN MIDG + G + ALE F+ MP RN+VSWNSM+
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVK 179
Query: 125 LHVRAKSFWECLKMFDEM----------MESGEAVPNEATLVSVLTAC-AHLGKLSVGMW 173
V+ E + +F+ M M G A + L C +S
Sbjct: 180 ALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAM 239
Query: 174 VHSFIKSNNI-KVDVLLS----------TCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
+ + ++N I + D L ++T +++ M+ A +FD MP +NV+SW
Sbjct: 240 ITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWT 299
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGP-KPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
+MI GY + E+AL +F +M + G KPN T+V +LSAC+ ++EG L+ +
Sbjct: 300 TMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISK 359
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 48/222 (21%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
+I +VG + A + F+ +P R+VV+W ++ +++ E ++FD +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV-------- 103
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
+ + +V+ T +++ Y++ + +A +F
Sbjct: 104 -------------------------------DSRKNVVTWTAMVSGYLRSKQLSIAEMLF 132
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVM 270
EMP RNVVSWN+MI GY G +KALELF EM P+ N ++ ++ A G +
Sbjct: 133 QEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKALVQRGRID 188
Query: 271 EGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
E F+ M R V + +VD LA+ G V + L
Sbjct: 189 EAMNLFERMPR-----RDVVSWTAMVDGLAKNGKVDEARRLF 225
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 278 bits (710), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 157/465 (33%), Positives = 251/465 (53%), Gaps = 41/465 (8%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM----------- 49
MYS+ G + AR +FD D+ S+N MI G+ + E + +L EM
Sbjct: 179 MYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVT 238
Query: 50 ---------PVRD------VWNW-------------NCMIAGYVAVGDLEAANELFERMP 81
V+D V + N ++ Y A G+++ A +F M
Sbjct: 239 LLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK 298
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
RDV+SW ++ G V GN+ LA +F++MP R+ +SW M+ ++RA F E L++F E
Sbjct: 299 ARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFRE 358
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M +G +P+E T+VSVLTACAHLG L +G W+ ++I N IK DV++ L+ MY KCG
Sbjct: 359 MQSAG-MIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCG 417
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+ A+ VF +M R+ +W +M++G +G G++A+++F +M+ +P+D T++ VLS
Sbjct: 418 CSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLS 477
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXX 321
AC H+GMV + +F MR + IEP + HYGC+VD+L RAGLVK + E+++ + +
Sbjct: 478 ACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNS 537
Query: 322 XXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVM 381
H D + E+ AK+++ELEP + Y +L N YA RW D+ VR
Sbjct: 538 IVWGALLGAS-RLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRK 596
Query: 382 IREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELG 426
I + ++K S++ + F ++ + S + +Y L EL
Sbjct: 597 IVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELA 641
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 134/273 (49%), Gaps = 20/273 (7%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR-----DVWNWNCMIAGYVAVG 68
+ +T D ++ +++G ++G A K V+ +++ N ++ Y G
Sbjct: 125 MLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCG 184
Query: 69 DLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLAL--- 125
++ A +F+R DV SWN MI G R+ ++E M RN+VS S+ L
Sbjct: 185 LMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTSVTLLLVL 243
Query: 126 ----HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
V+ K + + + ++ ++ E LV+ AC G++ + + + +K+
Sbjct: 244 SACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAAC---GEMDIAVRIFRSMKAR 300
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
DV+ T ++ YV+ G + LAR FD+MPVR+ +SW MI GY G ++LE+F
Sbjct: 301 ----DVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIF 356
Query: 242 LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
EM+ G P++ T V VL+AC H G + G W
Sbjct: 357 REMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 16/217 (7%)
Query: 95 CVRVG-NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA 153
C R+G +V A + F ++P +VV WN+M+ + E ++++ M++ G P+
Sbjct: 77 CSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEG-VTPDSH 135
Query: 154 TLVSVLTACAH-LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
T +L G L+ G +H + + ++ + L+ MY CG MD+AR VFD
Sbjct: 136 TFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR 195
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+V SWN MI GY E+++EL +EME+ P T + VLSAC+
Sbjct: 196 RCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDK--- 252
Query: 273 WWYFDLMRRVY------NIEPKVEHYGCIVDLLARAG 303
DL +RV+ EP + +V+ A G
Sbjct: 253 ----DLCKRVHEYVSECKTEPSLRLENALVNAYAACG 285
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/413 (35%), Positives = 236/413 (57%), Gaps = 33/413 (7%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFE 78
L +D ++D + K G+ +A+K+FD MP R + + MI Y G++EAA LF+
Sbjct: 157 LGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFD 216
Query: 79 RMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKM 138
M +RD+VSWN MIDG + G F N + L +
Sbjct: 217 SMCERDIVSWNVMIDGYAQHG-------FPN------------------------DALML 245
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
F +++ G+ P+E T+V+ L+AC+ +G L G W+H F+KS+ I+++V + T L+ MY
Sbjct: 246 FQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYS 305
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEK-KGPKPNDATFV 257
KCG+++ A VF++ P +++V+WN+MI GY +HG + AL LF EM+ G +P D TF+
Sbjct: 306 KCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFI 365
Query: 258 CVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSV 317
L AC HAG+V EG F+ M + Y I+PK+EHYGC+V LL RAG +K + E IK +++
Sbjct: 366 GTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNM 425
Query: 318 KXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVER 377
C H D LG+ +A+ LI L + G Y++LSN YA+ G ++ V +
Sbjct: 426 D-ADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAK 484
Query: 378 VRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
VR +++EKG+ KE S + +E+ ++ + + + +Y+ML ++ IK
Sbjct: 485 VRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIK 537
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 123/275 (44%), Gaps = 42/275 (15%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y+ G V A+ +FD LVS +MI + K G AAR LFD M RD+ +WN M
Sbjct: 170 VYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVM 229
Query: 61 IAGYVAVGDLEAANELFERM-----PDRDVVSWNCMIDGCVRVG---------------- 99
I GY G A LF+++ P D ++ + C ++G
Sbjct: 230 IDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSR 289
Query: 100 ---NVPL----------------ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
NV + A+ FN P +++V+WN+M+A + + L++F+
Sbjct: 290 IRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFN 349
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV-HSFIKSNNIKVDVLLSTCLLTMYVK 199
EM P + T + L ACAH G ++ G+ + S + IK + CL+++ +
Sbjct: 350 EMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGR 409
Query: 200 CGAMDLARDVFDEMPV-RNVVSWNSMIMGYGLHGN 233
G + A + M + + V W+S++ LHG+
Sbjct: 410 AGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGD 444
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 36/162 (22%)
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
S E PNE T S+L +C+ G +H+ + + +D ++T L+ +Y K G +
Sbjct: 123 SSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVV 178
Query: 205 LARDVFDEMP-------------------------------VRNVVSWNSMIMGYGLHGN 233
A+ VFD MP R++VSWN MI GY HG
Sbjct: 179 SAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGF 238
Query: 234 GEKALELFLEMEKKG-PKPNDATFVCVLSACTHAGMVMEGWW 274
AL LF ++ +G PKP++ T V LSAC+ G + G W
Sbjct: 239 PNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRW 280
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 141/381 (37%), Positives = 220/381 (57%), Gaps = 9/381 (2%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
DV+ N +I Y G+ + A+ LF+R+P+ D VSWN +I G V+ G + +AL F +M
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA 208
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+N +SW +M++ +V+A E L++F EM S + P+ +L + L+ACA LG L G
Sbjct: 209 EKNAISWTTMISGYVQADMNKEALQLFHEMQNS-DVEPDNVSLANALSACAQLGALEQGK 267
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
W+HS++ I++D +L L+ MY KCG M+ A +VF + ++V +W ++I GY HG
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 327
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
+G +A+ F+EM+K G KPN TF VL+AC++ G+V EG F M R YN++P +EHY
Sbjct: 328 HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 387
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
GCIVDLL RAGL+ ++ I+ + +K C H + ELGE + + LI ++
Sbjct: 388 GCIVDLLGRAGLLDEAKRFIQEMPLK-PNAVIWGALLKACRIHKNIELGEEIGEILIAID 446
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYS- 411
P G Y+ +N +A +WD R +++E+G+ K S + LE ++ + S
Sbjct: 447 PYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSH 506
Query: 412 -----VHRK-RIMYSMLSELG 426
+ K RIM L E G
Sbjct: 507 PEIEKIQSKWRIMRRKLEENG 527
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 45/288 (15%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+V G A LLFD D VS+NS+I G+VK G+ A LF +M ++ +W MI
Sbjct: 160 YAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMI 219
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWN-------------------------------- 89
+GYV + A +LF M + DV N
Sbjct: 220 SGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIR 279
Query: 90 -------CMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
+ID + G + ALE F + ++V +W ++++ + E + F EM
Sbjct: 280 MDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEM 339
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWV-HSFIKSNNIKVDVLLSTCLLTMYVKCG 201
+ G PN T +VLTAC++ G + G + +S + N+K + C++ + + G
Sbjct: 340 QKMG-IKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAG 398
Query: 202 AMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALELFLEME 245
+D A+ EMP++ N V W +++ +H N GE+ E+ + ++
Sbjct: 399 LLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAID 446
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 113/293 (38%), Gaps = 40/293 (13%)
Query: 101 VPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLT 160
+P A F+ + WN M+ + L ++ M+ S A N T S+L
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSS-APHNAYTFPSLLK 123
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
AC++L +H+ I + DV L+ Y G LA +FD +P + VS
Sbjct: 124 ACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVS 183
Query: 221 WNSMIMGYGLHGN-------------------------------GEKALELFLEMEKKGP 249
WNS+I GY G ++AL+LF EM+
Sbjct: 184 WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV 243
Query: 250 KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI-VDLLARAGLVKNS 308
+P++ + LSAC G + +G W + + V GC+ +D+ A+ G ++ +
Sbjct: 244 EPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV--LGCVLIDMYAKCGEMEEA 301
Query: 309 EELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIM 361
E+ K + K H G + +E++ M I P ++
Sbjct: 302 LEVFKNIKKKSVQAWTALISGYAYHGH-----GREAISKFMEMQKMGIKPNVI 349
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 274 bits (701), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 139/363 (38%), Positives = 218/363 (60%), Gaps = 2/363 (0%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
++ID + G ARK+FDEMP RD W M++ Y V D+++AN L +M +++
Sbjct: 908 TTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEA 967
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
+ NC+I+G + +GN+ A FN+MP ++++SW +M+ + + K + E + +F +MME G
Sbjct: 968 TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 1027
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
+P+E T+ +V++ACAHLG L +G VH + N +DV + + L+ MY KCG+++ A
Sbjct: 1028 -IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERA 1086
Query: 207 RDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHA 266
VF +P +N+ WNS+I G HG ++AL++F +ME + KPN TFV V +ACTHA
Sbjct: 1087 LLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHA 1146
Query: 267 GMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXX 326
G+V EG + M Y+I VEHYG +V L ++AGL+ + ELI + +
Sbjct: 1147 GLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE-PNAVIWG 1205
Query: 327 XXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKG 386
C H + + EI +L+ LEPM+ G Y +L + YA Q RW DV +R +RE G
Sbjct: 1206 ALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELG 1265
Query: 387 LQK 389
++K
Sbjct: 1266 IEK 1268
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 7/198 (3%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
++D N I C + LA+ +M NV +N++ V L+++
Sbjct: 802 NQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVR 861
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M+ + P+ T S++ A + + + H I V + T L+ Y G
Sbjct: 862 MLRDSVS-PSSYTYSSLVKASSFASRFGESLQAH--IWKFGFGFHVKIQTTLIDFYSATG 918
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+ AR VFDEMP R+ ++W +M+ Y + + A L +M +K N+AT C+++
Sbjct: 919 RIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEK----NEATSNCLIN 974
Query: 262 ACTHAGMVMEGWWYFDLM 279
G + + F+ M
Sbjct: 975 GYMGLGNLEQAESLFNQM 992
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 218/384 (56%), Gaps = 2/384 (0%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
GRV +ARL+FD ++V++ +MI G+ +N ARKLF+ MP + +W M+ GY
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYT 245
Query: 66 AVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLAL 125
G +E A E FE MP + V++ N MI G VG + A F+ M R+ +W M+
Sbjct: 246 LSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKA 305
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV 185
+ R E L +F +M + G P+ +L+S+L+ CA L L G VH+ +
Sbjct: 306 YERKGFELEALDLFAQMQKQG-VRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDD 364
Query: 186 DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEME 245
DV +++ L+TMYVKCG + A+ VFD ++++ WNS+I GY HG GE+AL++F EM
Sbjct: 365 DVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP 424
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
G PN T + +L+AC++AG + EG F+ M + + P VEHY C VD+L RAG V
Sbjct: 425 SSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQV 484
Query: 306 KNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNT 365
+ ELI+ +++K C TH +L E+ AK+L E EP + G Y++LS+
Sbjct: 485 DKAMELIESMTIK-PDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSI 543
Query: 366 YAAQGRWDDVERVRVMIREKGLQK 389
A++ +W DV VR +R + K
Sbjct: 544 NASRSKWGDVAVVRKNMRTNNVSK 567
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 139/277 (50%), Gaps = 13/277 (4%)
Query: 3 SVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIA 62
S G++++AR FDS + S+NS++ G+ NG AR+LFDEM R+V +WN +++
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVS 87
Query: 63 GYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
GY+ + A +FE MP+R+VVSW M+ G ++ G V A F RMP RN VSW M
Sbjct: 88 GYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVM 147
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
+ + K++D M V + +++ G++ + ++ N
Sbjct: 148 FGGLIDDGRIDKARKLYDMM-----PVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN 202
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
V+ T ++T Y + +D+AR +F+ MP + VSW SM++GY L G E A E F
Sbjct: 203 ----VVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFE 258
Query: 243 EMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM 279
M K +A V G + + FDLM
Sbjct: 259 VMPMKPVIACNAMIV----GFGEVGEISKARRVFDLM 291
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW-NWNC 59
MY G + A+L+FD + D++ +NS+I G+ +G A K+F EMP N
Sbjct: 375 MYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVT 434
Query: 60 MIAGYVA---VGDLEAANELFERMPDRDVVS-----WNCMIDGCVRVGNVPLALEFFNRM 111
+IA A G LE E+FE M + V+ ++C +D R G V A+E M
Sbjct: 435 LIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESM 494
Query: 112 PAR-NVVSWNSMLA 124
+ + W ++L
Sbjct: 495 TIKPDATVWGALLG 508
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 223/391 (57%), Gaps = 3/391 (0%)
Query: 11 ARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDL 70
A+ FD D S+N+MI G+ + GE AR+LF M ++ +WN MI+GY+ GDL
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDL 202
Query: 71 EAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA-RNVVSWNSMLALHVRA 129
E A+ F+ P R VV+W MI G ++ V LA F M +N+V+WN+M++ +V
Sbjct: 203 EKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVEN 262
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
+ LK+F M+E G PN + L S L C+ L L +G +H + + + DV
Sbjct: 263 SRPEDGLKLFRAMLEEG-IRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTA 321
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP 249
T L++MY KCG + A +F+ M ++VV+WN+MI GY HGN +KAL LF EM
Sbjct: 322 LTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKI 381
Query: 250 KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSE 309
+P+ TFV VL AC HAG+V G YF+ M R Y +EP+ +HY C+VDLL RAG ++ +
Sbjct: 382 RPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEAL 441
Query: 310 ELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQ 369
+LI+ + + C H + EL E A++L++L + Y+ L+N YA++
Sbjct: 442 KLIRSMPFR-PHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASK 500
Query: 370 GRWDDVERVRVMIREKGLQKEAASSVVHLED 400
RW+DV RVR ++E + K S + + +
Sbjct: 501 NRWEDVARVRKRMKESNVVKVPGYSWIEIRN 531
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 42/253 (16%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGC----------------- 95
++ N +IA V GD++ A +F M ++ ++WN ++ G
Sbjct: 60 QIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEI 119
Query: 96 ---------------VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
VR N A FF+RMP ++ SWN+M+ + R + ++F
Sbjct: 120 PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFY 179
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
MME E N ++S C L K S F K ++ V+ T ++T Y+K
Sbjct: 180 SMMEKNEVSWN--AMISGYIECGDLEKAS------HFFKVAPVR-GVVAWTAMITGYMKA 230
Query: 201 GAMDLARDVFDEMPV-RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCV 259
++LA +F +M V +N+V+WN+MI GY + E L+LF M ++G +PN +
Sbjct: 231 KKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSA 290
Query: 260 LSACTHAGMVMEG 272
L C+ + G
Sbjct: 291 LLGCSELSALQLG 303
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 271 bits (693), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 157/411 (38%), Positives = 226/411 (54%), Gaps = 19/411 (4%)
Query: 2 YSVFGRVSDARLLFDSSLTL---------------DLVSYNSMIDGHVKNGETGAARKLF 46
Y G+V AR LFD L ++VS+NSMI ++K G+ +AR LF
Sbjct: 245 YGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLF 304
Query: 47 DEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALE 106
D+M RD +WN MI GYV V +E A LF MP+RD SWN M+ G VGNV LA
Sbjct: 305 DQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARH 364
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
+F + P ++ VSWNS++A + + K + E + +F M GE P+ TL S+L+A L
Sbjct: 365 YFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEK-PDPHTLTSLLSASTGLV 423
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMI 225
L +GM +H + I DV + L+TMY +CG + +R +FDEM + R V++WN+MI
Sbjct: 424 NLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMI 482
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNI 285
GY HGN +AL LF M+ G P+ TFV VL+AC HAG+V E F M VY I
Sbjct: 483 GGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKI 542
Query: 286 EPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVA 345
EP++EHY +V++ + G + + +I + + C + + L + A
Sbjct: 543 EPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFE-PDKTVWGALLDACRIYNNVGLAHVAA 601
Query: 346 KRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
+ + LEP PY++L N YA G WD+ +VR+ + K ++KE SS V
Sbjct: 602 EAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 652
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 134/262 (51%), Gaps = 25/262 (9%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
G +++AR +F+ + V++N+MI G+VK E ARKLFD MP RDV WN MI+GYV
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYV 113
Query: 66 AVGD---LEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
+ G LE A +LF+ MP RD SWN MI G + + AL F +MP RN VSW++M
Sbjct: 114 SCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAM 173
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS-- 180
+ + + +F +M V + + L +++ +LS WV S
Sbjct: 174 ITGFCQNGEVDSAVVLFRKM-----PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLV 228
Query: 181 NNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP---------------VRNVVSWNSMI 225
+ + V L+ Y + G ++ AR +FD++P +NVVSWNSMI
Sbjct: 229 SGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMI 288
Query: 226 MGYGLHGNGEKALELFLEMEKK 247
Y G+ A LF +M+ +
Sbjct: 289 KAYLKVGDVVSARLLFDQMKDR 310
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 54/209 (25%)
Query: 58 NCMI-AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV 116
N MI +GY+A A ++FE++ R+ V+WN MI G V+ + A + F+ MP R+V
Sbjct: 48 NQMIRSGYIA-----EARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV 102
Query: 117 VSWNSMLALHVRA---KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
V+WN+M++ +V + E K+FDEM P+
Sbjct: 103 VTWNTMISGYVSCGGIRFLEEARKLFDEM-------PSR--------------------- 134
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
D +++ Y K + A +F++MP RN VSW++MI G+ +G
Sbjct: 135 ------------DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGE 182
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSA 262
+ A+ LF +M K P +C L A
Sbjct: 183 VDSAVVLFRKMPVKDSSP-----LCALVA 206
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 271 bits (692), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 250/471 (53%), Gaps = 41/471 (8%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP---------- 50
MY+ GR++ AR +FD D+V++N+MI+ + + G A KLF+EM
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 51 ----------------------------VR-DVWNWNCMIAGYVAVGDLEAANELFERMP 81
VR D ++ Y G ++ A E F +M
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
R++ M+ G + G + A F++ +++V W +M++ +V + E L++F+E
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M SG P+ ++ SV++ACA+LG L WVHS I N ++ ++ ++ L+ MY KCG
Sbjct: 335 MCCSG-IKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCG 393
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+D RDVF++MP RNVVSW+SMI +HG AL LF M+++ +PN+ TFV VL
Sbjct: 394 GLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLY 453
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXX 321
C+H+G+V EG F M YNI PK+EHYGC+VDL RA L++ + E+I+ + V
Sbjct: 454 GCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPV-ASN 512
Query: 322 XXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVM 381
C H + ELG+ AKR++ELEP G +++SN YA + RW+DV +R +
Sbjct: 513 VVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRV 572
Query: 382 IREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLS 432
+ EK + KE S + ++ + + + +Y+ L E+ + +KL+
Sbjct: 573 MEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLA 623
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
++ + + +L A + + L GM +H D + T + MY CG ++ AR+VF
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF 169
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVM 270
DEM R+VV+WN+MI Y G ++A +LF EM+ P++ ++SAC G +
Sbjct: 170 DEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMR 229
Query: 271 EGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
++ + ++ +V + A AG + + E + +SV+
Sbjct: 230 YNRAIYEFLIE-NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR 276
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 267 bits (683), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 132/356 (37%), Positives = 211/356 (59%), Gaps = 2/356 (0%)
Query: 50 PVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFN 109
P V N +I Y+ DL A+++F+ M +RDV+SWN ++ G R+G + A F+
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
M + +VSW +M++ + + E + F EM +G P+E +L+SVL +CA LG L
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG-IEPDEISLISVLPSCAQLGSLE 258
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
+G W+H + + + L+ MY KCG + A +F +M ++V+SW++MI GY
Sbjct: 259 LGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYA 318
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKV 289
HGN A+E F EM++ KPN TF+ +LSAC+H GM EG YFD+MR+ Y IEPK+
Sbjct: 319 YHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKI 378
Query: 290 EHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
EHYGC++D+LARAG ++ + E+ K + +K C T + ++ + L+
Sbjct: 379 EHYGCLIDVLARAGKLERAVEITKTMPMK-PDSKIWGSLLSSCRTPGNLDVALVAMDHLV 437
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKY 405
ELEP D+G Y++L+N YA G+W+DV R+R MIR + ++K S++ + + ++
Sbjct: 438 ELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEF 493
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 129/279 (46%), Gaps = 42/279 (15%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY F + DA +FD D++S+NS++ G+ + G+ A+ LF M + + +W M
Sbjct: 153 MYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAM 212
Query: 61 IAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPL------------- 103
I+GY +G A + F M + D +S ++ C ++G++ L
Sbjct: 213 ISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGF 272
Query: 104 ----------------------ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
A++ F +M ++V+SW++M++ + + ++ F+E
Sbjct: 273 LKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNE 332
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMYVKC 200
M+ + PN T + +L+AC+H+G G+ ++ + I+ + CL+ + +
Sbjct: 333 -MQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARA 391
Query: 201 GAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKAL 238
G ++ A ++ MP++ + W S++ GN + AL
Sbjct: 392 GKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVAL 430
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 116/254 (45%), Gaps = 34/254 (13%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
M+D C ++ ++ A FN++ NV +NS++ + + + ++++ +++ +P
Sbjct: 48 MVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELP 107
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
+ T + +CA LG +G VH + + V+ L+ MY+K + A VF
Sbjct: 108 DRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVF 167
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEK-------------------------------ALE 239
DEM R+V+SWNS++ GY G +K A++
Sbjct: 168 DEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMD 227
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG-WWYFDLMRRVYNIEPKVEHYGCIVDL 298
F EM+ G +P++ + + VL +C G + G W + RR + + V ++++
Sbjct: 228 FFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGV--CNALIEM 285
Query: 299 LARAGLVKNSEELI 312
++ G++ + +L
Sbjct: 286 YSKCGVISQAIQLF 299
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/453 (34%), Positives = 256/453 (56%), Gaps = 19/453 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MYS G++ DAR +FD ++VS+ SMI G+ NG A LF ++ V + + + M
Sbjct: 120 MYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM 179
Query: 61 I---AGYVAV----------GDLEAANE-LFERMPDRDVVSWNCMIDGCVR--VGNVPLA 104
G V+V G E+ + + +R DR V N ++D + G V +A
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 105 LEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
+ F+++ ++ VS+NS+++++ ++ E ++F ++++ N TL +VL A +H
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSH 299
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSM 224
G L +G +H + ++ DV++ T ++ MY KCG ++ AR FD M +NV SW +M
Sbjct: 300 SGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAM 359
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYN 284
I GYG+HG+ KALELF M G +PN TFV VL+AC+HAG+ +EGW +F+ M+ +
Sbjct: 360 IAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFG 419
Query: 285 IEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIV 344
+EP +EHYGC+VDLL RAG ++ + +LI+ + +K C H + EL EI
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK-PDSIIWSSLLAACRIHKNVELAEIS 478
Query: 345 AKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESK 404
RL EL+ + G Y++LS+ YA GRW DVERVR++++ +GL K S++ L
Sbjct: 479 VARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHV 538
Query: 405 YFVKNYSVHRKRIMYSMLSELGAHIKLSPAGSI 437
+ + + ++ +Y L+EL KL AG +
Sbjct: 539 FLIGDEEHPQREKIYEFLAELNR--KLLEAGYV 569
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 107 FFNR-MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL 165
FNR + +V SWNS++A R+ E L F M + P ++ + AC+ L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKL-SLYPTRSSFPCAIKACSSL 89
Query: 166 GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI 225
+ G H + D+ +S+ L+ MY CG ++ AR VFDE+P RN+VSW SMI
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATF------VCVLSACT 264
GY L+GN A+ LF ++ +DA F V V+SAC+
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/471 (31%), Positives = 246/471 (52%), Gaps = 41/471 (8%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
M++ G + +AR +FD S DLVS+N +I+G+ K GE A ++ M V +
Sbjct: 200 MFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVT 259
Query: 61 IAGYVA---------------------------------------VGDLEAANELFERMP 81
+ G V+ GD+ A +F+ +
Sbjct: 260 MIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE 319
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
R +VSW MI G R G + ++ + F+ M ++VV WN+M+ V+AK + L +F E
Sbjct: 320 KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQE 379
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M ++ P+E T++ L+AC+ LG L VG+W+H +I+ ++ ++V L T L+ MY KCG
Sbjct: 380 M-QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCG 438
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+ A VF + RN +++ ++I G LHG+ A+ F EM G P++ TF+ +LS
Sbjct: 439 NISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLS 498
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXX 321
AC H GM+ G YF M+ +N+ P+++HY +VDLL RAGL++ ++ L++ + ++
Sbjct: 499 ACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPME-AD 557
Query: 322 XXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVM 381
C H + ELGE AK+L+EL+P D G Y++L Y W+D +R R M
Sbjct: 558 AAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRM 617
Query: 382 IREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLS 432
+ E+G++K S + + ++ V++ S +Y L LG H++ S
Sbjct: 618 MNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMRSS 668
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 103/200 (51%), Gaps = 3/200 (1%)
Query: 115 NVVSWNSMLALHVRAKSFWECLKMFDEMMESG--EAVPNEATLVSVLTACAHLGKLSVGM 172
N+ SWN + +++ E ++ +M+ G E+ P+ T + CA L S+G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+ + +++ + + M+ CG M+ AR VFDE PVR++VSWN +I GY G
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
EKA+ ++ ME +G KP+D T + ++S+C+ G + G +++ ++ + +
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE-NGLRMTIPLV 295
Query: 293 GCIVDLLARAGLVKNSEELI 312
++D+ ++ G + + +
Sbjct: 296 NALMDMFSKCGDIHEARRIF 315
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/441 (33%), Positives = 249/441 (56%), Gaps = 12/441 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y+ FGR+ D + +FD DL+S+NS+I + N + A LF EM + + +C+
Sbjct: 291 LYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI-QPDCL 349
Query: 61 IAGYVA-----VGDLEAANELFERMPDR-----DVVSWNCMIDGCVRVGNVPLALEFFNR 110
+A +GD+ A + + D+ N ++ ++G V A FN
Sbjct: 350 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
+P +V+SWN++++ + + E ++M++ M E GE N+ T VSVL AC+ G L
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
GM +H + N + +DV + T L MY KCG ++ A +F ++P N V WN++I +G
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGF 529
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
HG+GEKA+ LF EM +G KP+ TFV +LSAC+H+G+V EG W F++M+ Y I P ++
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 291 HYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIE 350
HYGC+VD+ RAG ++ + + IK +S++ C H + +LG+I ++ L E
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMSLQ-PDASIWGALLSACRVHGNVDLGKIASEHLFE 648
Query: 351 LEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNY 410
+EP +G +++LSN YA+ G+W+ V+ +R + KGL+K S + +++ ++ N
Sbjct: 649 VEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQ 708
Query: 411 SVHRKRIMYSMLSELGAHIKL 431
+ MY L+ L A +K+
Sbjct: 709 THPMYEEMYRELTALQAKLKM 729
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D+ S+I + + G AR LFDEMPVRD+ +WN MI+GY G+ + A L +
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 82 DRDVVSWNCMIDGCVRVGN--------------------------VPLALEF-------- 107
D V+ ++ C G+ + L EF
Sbjct: 244 AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQK 303
Query: 108 -FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F+RM R+++SWNS++ + + + +F EM S P+ TL+S+ + + LG
Sbjct: 304 VFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS-RIQPDCLTLISLASILSQLG 362
Query: 167 KLSVGMWVHSF-IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI 225
+ V F ++ D+ + ++ MY K G +D AR VF+ +P +V+SWN++I
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTII 422
Query: 226 MGYGLHGNGEKALELFLEMEKKGP-KPNDATFVCVLSACTHAGMVMEG 272
GY +G +A+E++ ME++G N T+V VL AC+ AG + +G
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 470
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 121/268 (45%), Gaps = 42/268 (15%)
Query: 37 GETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM-------PD------- 82
G AR FD + RDV+ WN MI+GY G+ F PD
Sbjct: 100 GNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSV 159
Query: 83 ----RDVVSWN-------------------CMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
R V+ N +I R V A F+ MP R++ SW
Sbjct: 160 LKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSW 219
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
N+M++ + ++ + E L + +G + T+VS+L+AC G + G+ +HS+
Sbjct: 220 NAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSI 274
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
+ ++ ++ +S L+ +Y + G + + VFD M VR+++SWNS+I Y L+ +A+
Sbjct: 275 KHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 334
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAG 267
LF EM +P+ T + + S + G
Sbjct: 335 LFQEMRLSRIQPDCLTLISLASILSQLG 362
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 114/222 (51%), Gaps = 10/222 (4%)
Query: 98 VGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
+GNV LA F+ + R+V +WN M++ + RA + E ++ F M S P+ T S
Sbjct: 99 LGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPS 158
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
VL AC + G +H DV ++ L+ +Y + A+ AR +FDEMPVR+
Sbjct: 159 VLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRD 215
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDA-TFVCVLSACTHAGMVMEGWWYF 276
+ SWN+MI GY GN ++AL L G + D+ T V +LSACT AG G
Sbjct: 216 MGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 277 DLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+ + +E ++ ++DL A G +++ +++ + V+
Sbjct: 271 SYSIK-HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 186 DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF-LEM 244
+V +S L+ +Y G + LAR FD + R+V +WN MI GYG GN + + F L M
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 245 EKKGPKPNDATFVCVLSAC 263
G P+ TF VL AC
Sbjct: 145 LSSGLTPDYRTFPSVLKAC 163
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 262 bits (669), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 143/381 (37%), Positives = 214/381 (56%), Gaps = 2/381 (0%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFE 78
L DL NS++ + K G G A+ +F M +D +WN +I G V + A ELFE
Sbjct: 306 LEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFE 365
Query: 79 RMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKM 138
+MP +D+VSW MI G G + +E F MP ++ ++W +M++ V + E L
Sbjct: 366 KMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCW 425
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
F +M++ E PN T SVL+A A L L G+ +H + NI D+ + L++MY
Sbjct: 426 FHKMLQK-EVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYC 484
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
KCG + A +F + N+VS+N+MI GY +G G+KAL+LF +E G +PN TF+
Sbjct: 485 KCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLA 544
Query: 259 VLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+LSAC H G V GW YF M+ YNIEP +HY C+VDLL R+GL+ ++ LI + K
Sbjct: 545 LLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCK 604
Query: 319 XXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERV 378
TH+ +L E+ AK+LIELEP PY++LS Y+ G+ D +R+
Sbjct: 605 PHSGVWGSLLSAS-KTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRI 663
Query: 379 RVMIREKGLQKEAASSVVHLE 399
+ + K ++K+ SS + L+
Sbjct: 664 MNIKKSKRIKKDPGSSWIILK 684
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 117/228 (51%), Gaps = 2/228 (0%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPV--RDVWNWNCMIAGYVAVGDLEAANELFER 79
+ VSY +MI G V+ G A L+ E PV RD N +++GY+ G A +F+
Sbjct: 143 NAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQG 202
Query: 80 MPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMF 139
M ++VVS + M+ G ++G + A F+RM RNV++W +M+ + +A F + +F
Sbjct: 203 MAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLF 262
Query: 140 DEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVK 199
M + G+ N TL + AC + G +H + ++ D+ L L++MY K
Sbjct: 263 LRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSK 322
Query: 200 CGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK 247
G M A+ VF M ++ VSWNS+I G +A ELF +M K
Sbjct: 323 LGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK 370
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 127/274 (46%), Gaps = 13/274 (4%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L ++ + + NS I H +NG A +F +M R + +W MI+ Y G +
Sbjct: 40 FLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSK 99
Query: 73 ANELFERMPDRDVVSWNCMIDGCVRVG-NVPLALEFFNRMPARNVVSWNSMLALHVRAKS 131
A ++F+ MP R S+N MI ++ ++ A E F +P +N VS+ +M+ VRA
Sbjct: 100 AWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGR 159
Query: 132 FWECLKMFDEM-MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV-DVLL 189
F E ++ E ++ ++V + L G L G W + + V +V+
Sbjct: 160 FDEAEFLYAETPVKFRDSVASNVLLS---------GYLRAGKWNEAVRVFQGMAVKEVVS 210
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP 249
+ ++ Y K G + AR +FD M RNV++W +MI GY G E LFL M ++G
Sbjct: 211 CSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD 270
Query: 250 -KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV 282
K N T + AC EG L+ R+
Sbjct: 271 VKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRM 304
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 261 bits (668), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/354 (36%), Positives = 220/354 (62%), Gaps = 2/354 (0%)
Query: 79 RMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKM 138
R D ++V WN MIDG +R+G+ A F++M R+VVSWN+M++ + F + +++
Sbjct: 202 RKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEV 261
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
F EM + G+ PN TLVSVL A + LG L +G W+H + + + I++D +L + L+ MY
Sbjct: 262 FREM-KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYS 320
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
KCG ++ A VF+ +P NV++W++MI G+ +HG A++ F +M + G +P+D ++
Sbjct: 321 KCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYIN 380
Query: 259 VLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+L+AC+H G+V EG YF M V +EP++EHYGC+VDLL R+GL+ +EE I + +K
Sbjct: 381 LLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIK 440
Query: 319 XXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERV 378
C + E+G+ VA L+++ P D G Y+ LSN YA+QG W +V +
Sbjct: 441 -PDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEM 499
Query: 379 RVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLS 432
R+ ++EK ++K+ S++ ++ ++ V++ S + + + SML E+ ++L+
Sbjct: 500 RLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLA 553
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 97/228 (42%), Gaps = 59/228 (25%)
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWE--------CLKMFDEMMESGEAVPN 151
++ A + FN+MP RN SWN+++ + F E + +F EMM PN
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTII------RGFSESDEDKALIAITLFYEMMSDEFVEPN 127
Query: 152 EATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAM-------- 203
T SVL ACA GK+ G +H D + + L+ MYV CG M
Sbjct: 128 RFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFY 187
Query: 204 -------------------------------------DLARDVFDEMPVRNVVSWNSMIM 226
AR +FD+M R+VVSWN+MI
Sbjct: 188 KNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMIS 247
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
GY L+G + A+E+F EM+K +PN T V VL A + G + G W
Sbjct: 248 GYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEW 295
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 147/322 (45%), Gaps = 70/322 (21%)
Query: 1 MYSVFGRVSDARLLFDSSLTL--------------DLVSYNSMIDGHVKNGETGAARKLF 46
MY + G + DAR+LF ++ ++V +N MIDG+++ G+ AAR LF
Sbjct: 172 MYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLF 231
Query: 47 DEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDV--------------------- 85
D+M R V +WN MI+GY G + A E+F M D+
Sbjct: 232 DKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLE 291
Query: 86 ------------------VSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML---A 124
V + +ID + G + A+ F R+P NV++W++M+ A
Sbjct: 292 LGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFA 351
Query: 125 LHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG-MWVHSFIKSNNI 183
+H +A +C F +M ++G P++ +++LTAC+H G + G + + + +
Sbjct: 352 IHGQAGDAIDC---FCKMRQAG-VRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGL 407
Query: 184 KVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALE 239
+ + C++ + + G +D A + MP++ + V W +++ + GN G++
Sbjct: 408 EPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVAN 467
Query: 240 LFLEMEKKGPKPNDATFVCVLS 261
+ ++M P+D+ LS
Sbjct: 468 ILMDM-----VPHDSGAYVALS 484
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 177 FIKSNNIKVDVLLSTCLL----TMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
FIKS ++ D L + +L T + +D A +F++MP RN SWN++I G+
Sbjct: 46 FIKSGQMR-DTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFS-ES 103
Query: 233 NGEKAL---ELFLE-MEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ +KAL LF E M + +PN TF VL AC G + EG
Sbjct: 104 DEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEG 147
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 227/379 (59%), Gaps = 8/379 (2%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
N++I H G+ G A +LFD+ W+ M +GY G ++ A LF+ MP +D V
Sbjct: 151 NALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQV 210
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
+WN MI GC++ + A E F+R ++VV+WN+M++ +V E L +F EM ++G
Sbjct: 211 AWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAG 270
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFI-----KSNNIKVDVLLSTCLLTMYVKCG 201
E P+ T++S+L+ACA LG L G +H +I S++I V + L+ MY KCG
Sbjct: 271 EH-PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCG 329
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
++D A +VF + R++ +WN++I+G LH + E ++E+F EM++ PN+ TF+ V+
Sbjct: 330 SIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVIL 388
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXX 321
AC+H+G V EG YF LMR +YNIEP ++HYGC+VD+L RAG ++ + ++ + ++
Sbjct: 389 ACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIE-PN 447
Query: 322 XXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVM 381
C + + ELG+ ++L+ + + G Y++LSN YA+ G+WD V++VR M
Sbjct: 448 AIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKM 507
Query: 382 IREKGLQKEAASSVVHLED 400
+ ++K S++ +D
Sbjct: 508 FDDTRVKKPTGVSLIEEDD 526
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 139/297 (46%), Gaps = 57/297 (19%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ G++ +A LFD D V++N MI G +K E +AR+LFD +DV WN MI
Sbjct: 188 YAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMI 247
Query: 62 AGYVAVGDLEAANELFERMPDR----DVVS------------------------------ 87
+GYV G + A +F+ M D DVV+
Sbjct: 248 SGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASV 307
Query: 88 ----------WNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM---LALHVRAKSFWE 134
WN +ID + G++ A+E F + R++ +WN++ LALH S
Sbjct: 308 SSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEGS--- 364
Query: 135 CLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS-NNIKVDVLLSTCL 193
++MF+E M+ + PNE T + V+ AC+H G++ G S ++ NI+ ++ C+
Sbjct: 365 -IEMFEE-MQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCM 422
Query: 194 LTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALELFLEMEK 246
+ M + G ++ A + M + N + W +++ ++GN G+ A E L M K
Sbjct: 423 VDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRK 479
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 100 NVPLALEF----FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATL 155
+VP AL++ F+ +P +V N +L ++ + + ++ EM + G + P+ T
Sbjct: 57 SVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVS-PDRYTF 115
Query: 156 VSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV 215
VL AC+ L S G H + + ++ + L+ + CG + +A ++FD+
Sbjct: 116 TFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAK 175
Query: 216 RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
+ V+W+SM GY G ++A+ LF EM P + + +++ C
Sbjct: 176 AHKVAWSSMTSGYAKRGKIDEAMRLFDEM----PYKDQVAWNVMITGC 219
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
GA+ A +FDE+P +V N ++ G EK + L+ EMEK+G P+ TF VL
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 261 SACT 264
AC+
Sbjct: 120 KACS 123
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 151/460 (32%), Positives = 238/460 (51%), Gaps = 49/460 (10%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y VF VS+ + Y +MIDG V +G + L+ M V N +I
Sbjct: 81 YDVFSYVSNPNVYL----------YTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVI 130
Query: 62 AG-----------------------------------YVAVGDLEAANELFERMPDRDVV 86
Y G+L A ++F+ MPDRD V
Sbjct: 131 TSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHV 190
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM-MES 145
+ MI+ G + ALE F + ++ V W +M+ VR K + L++F EM ME+
Sbjct: 191 AATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMEN 250
Query: 146 GEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDL 205
A NE T V VL+AC+ LG L +G WVHSF+++ +++ + L+ MY +CG ++
Sbjct: 251 VSA--NEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINE 308
Query: 206 ARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH 265
AR VF M ++V+S+N+MI G +HG +A+ F +M +G +PN T V +L+AC+H
Sbjct: 309 ARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSH 368
Query: 266 AGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXX 325
G++ G F+ M+RV+N+EP++EHYGCIVDLL R G ++ + I+ + ++
Sbjct: 369 GGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIE-PDHIML 427
Query: 326 XXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREK 385
C H + ELGE +AKRL E E D G Y++LSN YA+ G+W + +R +R+
Sbjct: 428 GTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDS 487
Query: 386 GLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
G++KE S + +++ ++ V + + K +Y L EL
Sbjct: 488 GIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 133/301 (44%), Gaps = 49/301 (16%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y G + +A+ +FD D V+ MI+ + + G A +LF ++ ++D W M
Sbjct: 167 IYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAM 226
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVS----------------------W---------- 88
I G V ++ A ELF M +V + W
Sbjct: 227 IDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRM 286
Query: 89 -------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
N +I+ R G++ A F M ++V+S+N+M++ + E + F +
Sbjct: 287 ELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRD 346
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWV-HSFIKSNNIKVDVLLSTCLLTMYVKC 200
M+ G PN+ TLV++L AC+H G L +G+ V +S + N++ + C++ + +
Sbjct: 347 MVNRG-FRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRV 405
Query: 201 GAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALELFLEMEKKGPKPNDATF 256
G ++ A + +P+ + + +++ +HGN GEK + E E P+ T+
Sbjct: 406 GRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESE----NPDSGTY 461
Query: 257 V 257
V
Sbjct: 462 V 462
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 5/205 (2%)
Query: 70 LEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRA 129
++ A ++F + + +V + MIDG V G + ++RM +V+ N ++ ++A
Sbjct: 77 VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA 136
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
C ++ ++++ G L ++ G+L + + D +
Sbjct: 137 CDLKVCREIHAQVLKLGFGSSRSVGL-KMMEIYGKSGELVNAKKMFDEMPDR----DHVA 191
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP 249
+T ++ Y +CG + A ++F ++ +++ V W +MI G + KALELF EM+ +
Sbjct: 192 ATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENV 251
Query: 250 KPNDATFVCVLSACTHAGMVMEGWW 274
N+ T VCVLSAC+ G + G W
Sbjct: 252 SANEFTAVCVLSACSDLGALELGRW 276
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 258 bits (659), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 218/399 (54%), Gaps = 34/399 (8%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY G V AR +FD +LV++N++I + + AR++FD+M VR+ +WN M
Sbjct: 150 MYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVM 209
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWN 120
+AGY+ G+LE+A +F MP RD VSW+ MI G G
Sbjct: 210 LAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNG--------------------- 248
Query: 121 SMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS 180
SF E F E+ +G + PNE +L VL+AC+ G G +H F++
Sbjct: 249 ----------SFNESFLYFRELQRAGMS-PNEVSLTGVLSACSQSGSFEFGKILHGFVEK 297
Query: 181 NNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP-VRNVVSWNSMIMGYGLHGNGEKALE 239
V ++ L+ MY +CG + +AR VF+ M R +VSW SMI G +HG GE+A+
Sbjct: 298 AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 357
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
LF EM G P+ +F+ +L AC+HAG++ EG YF M+RVY+IEP++EHYGC+VDL
Sbjct: 358 LFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLY 417
Query: 300 ARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPY 359
R+G ++ + + I + + C++H + EL E V +RL EL+P + G
Sbjct: 418 GRSGKLQKAYDFICQMPIP-PTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDL 476
Query: 360 IMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHL 398
++LSN YA G+W DV +R + + ++K A S+V +
Sbjct: 477 VLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEV 515
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 84/212 (39%), Gaps = 35/212 (16%)
Query: 101 VPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLT 160
+P A P + +N+++ + + + +F EMM G P+ + V+
Sbjct: 55 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIK 114
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP------ 214
A + L G +H + ++ + + T L+ MY CG ++ AR VFDEM
Sbjct: 115 AVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVA 174
Query: 215 -------------------------VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP 249
VRN SWN M+ GY G E A +F EM P
Sbjct: 175 WNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEM----P 230
Query: 250 KPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
+D ++ ++ H G E + YF ++R
Sbjct: 231 HRDDVSWSTMIVGIAHNGSFNESFLYFRELQR 262
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 232/431 (53%), Gaps = 42/431 (9%)
Query: 5 FGRVSDARLL---FDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
FGR +++ FDSS+ + +I + G G ARK+FDEM V+DV WN ++
Sbjct: 134 FGRQIHGQVVVFGFDSSVHV----VTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALL 189
Query: 62 AGYVAVGDLEAANELFERMP--DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
AGY VG+++ A L E MP R+ VSW C+I G + G A+E F RM
Sbjct: 190 AGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRM-------- 241
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
+ME+ E P+E TL++VL+ACA LG L +G + S++
Sbjct: 242 ----------------------LMENVE--PDEVTLLAVLSACADLGSLELGERICSYVD 277
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
+ V L+ ++ MY K G + A DVF+ + RNVV+W ++I G HG+G +AL
Sbjct: 278 HRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALA 337
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
+F M K G +PND TF+ +LSAC+H G V G F+ MR Y I P +EHYGC++DLL
Sbjct: 338 MFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLL 397
Query: 300 ARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPY 359
RAG ++ ++E+IK + K H D ELGE LI+LEP + G Y
Sbjct: 398 GRAGKLREADEVIKSMPFKANAAIWGSLLAAS-NVHHDLELGERALSELIKLEPNNSGNY 456
Query: 360 IMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMY 419
++L+N Y+ GRWD+ +R M++ G++K A S + +E+ K+ + + + ++
Sbjct: 457 MLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIH 516
Query: 420 SMLSELGAHIK 430
+L E+ I+
Sbjct: 517 EILQEMDLQIQ 527
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 145/300 (48%), Gaps = 52/300 (17%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP--VRDVWNWN 58
MY G + DAR +FD L D+ +N+++ G+ K GE AR L + MP VR+ +W
Sbjct: 160 MYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWT 219
Query: 59 CMIAGYVAVGDLEAANELFERM------PD------------------------------ 82
C+I+GY G A E+F+RM PD
Sbjct: 220 CVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHR 279
Query: 83 ---RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMF 139
R V N +ID + GN+ AL+ F + RNVV+W +++A E L MF
Sbjct: 280 GMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMF 339
Query: 140 DEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMYV 198
+ M+++G PN+ T +++L+AC+H+G + +G + + ++S I ++ C++ +
Sbjct: 340 NRMVKAG-VRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLG 398
Query: 199 KCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALELFLEMEKKGPKPNDA 254
+ G + A +V MP + N W S++ +H + GE+AL +++E PN++
Sbjct: 399 RAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLE-----PNNS 453
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 104/246 (42%), Gaps = 25/246 (10%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
+RD ++ I+ C G++ A F P N N+M +RA L + DE
Sbjct: 44 NRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTM----IRA------LSLLDE 93
Query: 142 MMESGEAV------------PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
A+ P+ T VL + + G +H + V +
Sbjct: 94 PNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHV 153
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP 249
T L+ MY CG + AR +FDEM V++V WN+++ GYG G ++A L LEM
Sbjct: 154 VTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL-LEMMPCWV 212
Query: 250 KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSE 309
+ N+ ++ CV+S +G E F M + N+EP ++ A G ++ E
Sbjct: 213 R-NEVSWTCVISGYAKSGRASEAIEVFQRM-LMENVEPDEVTLLAVLSACADLGSLELGE 270
Query: 310 ELIKYV 315
+ YV
Sbjct: 271 RICSYV 276
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 227/423 (53%), Gaps = 34/423 (8%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
F S D ++I + K G AR++FDEM RDV WN MI GY GD++AA
Sbjct: 108 FFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAA 167
Query: 74 NELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFW 133
ELF+ MP ++V SW +I G + GN +
Sbjct: 168 MELFDSMPRKNVTSWTTVISGFSQNGN-------------------------------YS 196
Query: 134 ECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCL 193
E LKMF M + PN T+VSVL ACA+LG+L +G + + + N ++ +
Sbjct: 197 EALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNAT 256
Query: 194 LTMYVKCGAMDLARDVFDEMP-VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
+ MY KCG +D+A+ +F+E+ RN+ SWNSMI HG ++AL LF +M ++G KP+
Sbjct: 257 IEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPD 316
Query: 253 DATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
TFV +L AC H GMV++G F M V+ I PK+EHYGC++DLL R G ++ + +LI
Sbjct: 317 AVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLI 376
Query: 313 KYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRW 372
K + +K C+ H + E+ EI ++ L +LEP + G +++SN YAA +W
Sbjct: 377 KTMPMK-PDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKW 435
Query: 373 DDVERVRVMIREKGLQKEAA-SSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKL 431
D V R+R +++++ + K A S V + K+ V++ S R +Y +L E+ +KL
Sbjct: 436 DGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKL 495
Query: 432 SPA 434
+
Sbjct: 496 EKS 498
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 127/294 (43%), Gaps = 47/294 (15%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ G + AR +FD D+ +N+MI G+ + G+ AA +LFD MP ++V +W +I
Sbjct: 127 YAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVI 186
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWN-----CMIDGCVRVGNVPLA--LE-------F 107
+G+ G+ A ++F M V N ++ C +G + + LE F
Sbjct: 187 SGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGF 246
Query: 108 FNRM---------------------------PARNVVSWNSMLALHVRAKSFWECLKMFD 140
F+ + RN+ SWNSM+ E L +F
Sbjct: 247 FDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFA 306
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV-HSFIKSNNIKVDVLLSTCLLTMYVK 199
+M+ GE P+ T V +L AC H G + G + S + + I + C++ + +
Sbjct: 307 QMLREGEK-PDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGR 365
Query: 200 CGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALELFLEMEKKGP 249
G + A D+ MP++ + V W +++ HGN E A E ++E P
Sbjct: 366 VGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNP 419
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
+HS + + D T L+T Y K GA+ AR VFDEM R+V WN+MI GY G+
Sbjct: 104 LHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGD 163
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
+ A+ELF M P+ N ++ V+S + G E F M + +++P
Sbjct: 164 MKAAMELFDSM----PRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKP 213
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 143/468 (30%), Positives = 239/468 (51%), Gaps = 40/468 (8%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWN----- 56
Y G + A +F + D+VS+NSMI+G V+ G A +LF +M DV
Sbjct: 176 YFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235
Query: 57 ----------------------------------WNCMIAGYVAVGDLEAANELFERMPD 82
N M+ Y G +E A LF+ M +
Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 295
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
+D V+W M+DG + A E N MP +++V+WN++++ + + E L +F E+
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL 355
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
N+ TLVS L+ACA +G L +G W+HS+IK + I+++ +++ L+ MY KCG
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGD 415
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
++ +R+VF+ + R+V W++MI G +HG G +A+++F +M++ KPN TF V A
Sbjct: 416 LEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475
Query: 263 CTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXX 322
C+H G+V E F M Y I P+ +HY CIVD+L R+G ++ + + I+ + +
Sbjct: 476 CSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIP-PST 534
Query: 323 XXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMI 382
C H + L E+ RL+ELEP + G +++LSN YA G+W++V +R +
Sbjct: 535 SVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHM 594
Query: 383 REKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
R GL+KE S + ++ ++ + + +Y L E+ +K
Sbjct: 595 RVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLK 642
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 154/346 (44%), Gaps = 74/346 (21%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGD---------------------------LEAAN 74
ARK+FDE+P + + WN +I Y + D ++AA
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 75 EL-------------FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
E+ + DV N +I G++ A + F + ++VVSWNS
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
M+ V+ S + L++F +M ES + + T+V VL+ACA + L G V S+I+ N
Sbjct: 203 MINGFVQKGSPDKALELFKKM-ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEEN 261
Query: 182 NIKVDVLLSTCLLTMYVKCGAM-------------------------------DLARDVF 210
+ V++ L+ +L MY KCG++ + AR+V
Sbjct: 262 RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVL 321
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEME-KKGPKPNDATFVCVLSACTHAGMV 269
+ MP +++V+WN++I Y +G +AL +F E++ +K K N T V LSAC G +
Sbjct: 322 NSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGAL 381
Query: 270 MEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYV 315
G W +++ + I ++ + ++ G ++ S E+ V
Sbjct: 382 ELGRWIHSYIKK-HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV 426
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 129/305 (42%), Gaps = 56/305 (18%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ G + DA+ LFD+ D V++ +M+DG+ + + AAR++ + MP +D+ WN +
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSWN-----CMIDGCVRVGNVPL------------ 103
I+ Y G A +F + + + N + C +VG + L
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG 395
Query: 104 -----------------------ALEFFNRMPARNVVSWNSM---LALHVRAKSFWECLK 137
+ E FN + R+V W++M LA+H E +
Sbjct: 396 IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN---EAVD 452
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTM 196
MF +M E+ PN T +V AC+H G + + ++SN I + C++ +
Sbjct: 453 MFYKMQEAN-VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 511
Query: 197 YVKCGAMDLARDVFDEMPVRNVVS-WNSMIMGYGLHGN---GEKALELFLEMEKKGPKPN 252
+ G ++ A + MP+ S W +++ +H N E A LE+E + N
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPR----N 567
Query: 253 DATFV 257
D V
Sbjct: 568 DGAHV 572
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 146/458 (31%), Positives = 238/458 (51%), Gaps = 51/458 (11%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGY- 64
G+ A L + SL + ++++D + + + R++FD M R + WN MIAGY
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 65 ----------VAVGDLEAANEL-----------------------------FERMPDRDV 85
+ +G E+A L +R DRD
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 440
Query: 86 VSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMES 145
N ++D R+G + +A+ F +M R++V+WN+M+ +V ++ + L + +M
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNL 500
Query: 146 GEAV----------PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLT 195
V PN TL+++L +CA L L+ G +H++ NN+ DV + + L+
Sbjct: 501 ERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVD 560
Query: 196 MYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDAT 255
MY KCG + ++R VFD++P +NV++WN +IM YG+HGNG++A++L M +G KPN+ T
Sbjct: 561 MYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVT 620
Query: 256 FVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYV 315
F+ V +AC+H+GMV EG F +M+ Y +EP +HY C+VDLL RAG +K + +L+ +
Sbjct: 621 FISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMM 680
Query: 316 SVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDV 375
H + E+GEI A+ LI+LEP Y++L+N Y++ G WD
Sbjct: 681 PRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKA 740
Query: 376 ERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVH 413
VR ++E+G++KE S + D E FV S H
Sbjct: 741 TEVRRNMKEQGVRKEPGCSWIEHGD-EVHKFVAGDSSH 777
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 148/338 (43%), Gaps = 21/338 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY G+++ +++L S DLV++N+++ +N + A + EM + V
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 61 IAGYV-AVGDLEA--------ANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
I+ + A LE A L D + + ++D V F+ M
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
R + WN+M+A + + + E L +F M ES + N T+ V+ AC G S
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
+H F+ + D + L+ MY + G +D+A +F +M R++V+WN+MI GY
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 232 GNGEKALELFLEME------KKGP-----KPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
+ E AL L +M+ KG KPN T + +L +C + +G
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544
Query: 281 RVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+ N+ V +VD+ A+ G ++ S ++ + K
Sbjct: 545 K-NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 98/187 (52%), Gaps = 5/187 (2%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
N +++ + G+ + F+R+ RN VSWNS+++ + + L+ F M++
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDE-NV 195
Query: 149 VPNEATLVSVLTACAHLG---KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDL 205
P+ TLVSV+TAC++L L +G VH++ +++ + L+ MY K G +
Sbjct: 196 EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLAS 254
Query: 206 ARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH 265
++ + R++V+WN+++ + +ALE EM +G +P++ T VL AC+H
Sbjct: 255 SKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314
Query: 266 AGMVMEG 272
M+ G
Sbjct: 315 LEMLRTG 321
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
W +L VR+ E + + +M+ G P+ ++L A A L + +G +H+ +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLG-IKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 179 KSNNIKVD-VLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
VD V ++ L+ +Y KCG VFD + RN VSWNS+I E A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGM 268
LE F M + +P+ T V V++AC++ M
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 224/381 (58%), Gaps = 4/381 (1%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
D++ N +I Y + D +A +LF+ MP +++V+WN ++D + G+V A F+ M
Sbjct: 142 DLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMS 201
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R+VV+W+SM+ +V+ + + L++FD+MM G + NE T+VSV+ ACAHLG L+ G
Sbjct: 202 ERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGK 261
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR--NVVSWNSMIMGYGL 230
VH +I ++ + V+L T L+ MY KCG++ A VF V+ + + WN++I G
Sbjct: 262 TVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLAS 321
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
HG ++L+LF +M + P++ TF+C+L+AC+H G+V E W +F ++ EPK E
Sbjct: 322 HGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSE 380
Query: 291 HYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIE 350
HY C+VD+L+RAGLVK++ + I + +K C H + EL E V K+LIE
Sbjct: 381 HYACMVDVLSRAGLVKDAHDFISEMPIK-PTGSMLGALLNGCINHGNLELAETVGKKLIE 439
Query: 351 LEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNY 410
L+P + G Y+ L+N YA ++ +R + +KG++K A S++ L+ ++ +
Sbjct: 440 LQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDK 499
Query: 411 SVHRKRIMYSMLSELGAHIKL 431
+ +Y++L GA + L
Sbjct: 500 THFHSDKIYAVLQLTGAWMNL 520
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 134/300 (44%), Gaps = 45/300 (15%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY F + AR LFD +LV++NS++D + K+G+ +AR +FDEM RDV W+ M
Sbjct: 152 MYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSM 211
Query: 61 IAGYVAVGDLEAANELFERM--------PDRDVVSWNC---------------------- 90
I GYV G+ A E+F++M + +VS C
Sbjct: 212 IDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVH 271
Query: 91 ----------MIDGCVRVGNVPLALEFFNRMPAR--NVVSWNSMLALHVRAKSFWECLKM 138
+ID + G++ A F R + + + WN+++ E L++
Sbjct: 272 LPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQL 331
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
F +M ES + P+E T + +L AC+H G + +K + + C++ +
Sbjct: 332 FHKMRES-KIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLS 390
Query: 199 KCGAMDLARDVFDEMPVRNVVS-WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
+ G + A D EMP++ S +++ G HGN E A + ++ + P ND +V
Sbjct: 391 RAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPH-NDGRYV 449
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 111/252 (44%), Gaps = 34/252 (13%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
G+V A +F +++ WN ++ +++ + + ++ +M+ G +P+ T +
Sbjct: 56 GDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFG-LLPDHMTYPFL 114
Query: 159 LTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
+ + + L +G +H + + ++ D+ + L+ MY AR +FDEMP +N+
Sbjct: 115 MKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNL 174
Query: 219 VSWN-------------------------------SMIMGYGLHGNGEKALELFLEMEKK 247
V+WN SMI GY G KALE+F +M +
Sbjct: 175 VTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRM 234
Query: 248 G-PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVK 306
G K N+ T V V+ AC H G + G + V+ + V ++D+ A+ G +
Sbjct: 235 GSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVH-LPLTVILQTSLIDMYAKCGSIG 293
Query: 307 NSEELIKYVSVK 318
++ + SVK
Sbjct: 294 DAWSVFYRASVK 305
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/476 (32%), Positives = 247/476 (51%), Gaps = 48/476 (10%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLF----------DEMP 50
MYS G V+DA+ +FD ++VS+NS+I +NG A +F DE+
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 51 V------------------------------RDVWNWNCMIAGYVAVGDLEAANELFERM 80
+ D+ N + Y ++ A +F+ M
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 81 PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
P R+V++ MI G + A F +M RNVVSWN+++A + + E L +F
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV------DVLLSTCLL 194
+++ P + ++L ACA L +L +GM H + + K D+ + L+
Sbjct: 376 -LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLI 434
Query: 195 TMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDA 254
MYVKCG ++ VF +M R+ VSWN+MI+G+ +G G +ALELF EM + G KP+
Sbjct: 435 DMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHI 494
Query: 255 TFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKY 314
T + VLSAC HAG V EG YF M R + + P +HY C+VDLL RAG ++ ++ +I+
Sbjct: 495 TMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEE 554
Query: 315 VSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDD 374
+ ++ C H + LG+ VA++L+E+EP + GPY++LSN YA G+W+D
Sbjct: 555 MPMQ-PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWED 613
Query: 375 VERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
V VR +R++G+ K+ S + ++ + + VK+ S RK+ ++S+L L A ++
Sbjct: 614 VMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 148/343 (43%), Gaps = 77/343 (22%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
YS G + D R +FD ++ ++NS++ G K G A LF MP RD WN M+
Sbjct: 65 YSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMV 124
Query: 62 AGYVAVGDLEAANELFERMPDR-------------------------------------- 83
+G+ E A F M
Sbjct: 125 SGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFL 184
Query: 84 -DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
DV + ++D + GNV A F+ M RNVVSWNS++ + E L +F M
Sbjct: 185 SDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMM 244
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS-FIKSNNIKVDVLLSTCLLTMYVKCG 201
+ES P+E TL SV++ACA L + VG VH +K++ ++ D++LS + MY KC
Sbjct: 245 LES-RVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS 303
Query: 202 AMDLARDVFDEMPV-------------------------------RNVVSWNSMIMGYGL 230
+ AR +FD MP+ RNVVSWN++I GY
Sbjct: 304 RIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ 363
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACT-----HAGM 268
+G E+AL LF ++++ P +F +L AC H GM
Sbjct: 364 NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGM 406
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 144/302 (47%), Gaps = 32/302 (10%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
S + ++ N +ID + K G R++FD+MP R+++ WN ++ G +G L+ A+ L
Sbjct: 49 SGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSL 108
Query: 77 FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECL 136
F MP+RD +WN M+ G + AL +F
Sbjct: 109 FRSMPERDQCTWNSMVSGFAQHDRCEEALCYF---------------------------- 140
Query: 137 KMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTM 196
MM V NE + SVL+AC+ L ++ G+ VHS I + DV + + L+ M
Sbjct: 141 ----AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 197 YVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATF 256
Y KCG ++ A+ VFDEM RNVVSWNS+I + +G +AL++F M + +P++ T
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 257 VCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVS 316
V+SAC + G + + + + VD+ A+ +K + + +
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 317 VK 318
++
Sbjct: 317 IR 318
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 32/171 (18%)
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV-------------- 218
+VH+ + + ++ + L+ Y KCG+++ R VFD+MP RN+
Sbjct: 41 YVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLG 100
Query: 219 -----------------VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+WNSM+ G+ H E+AL F M K+G N+ +F VLS
Sbjct: 101 FLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
AC+ + +G L+ + + V +VD+ ++ G V +++ +
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFL-SDVYIGSALVDMYSKCGNVNDAQRVF 210
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/450 (34%), Positives = 239/450 (53%), Gaps = 12/450 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ G + AR LFD L ++VS+NSMID +V+N A +F +M V +
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 61 IAGYVA----VGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ G + +GDLE + E DR+V N +I + V A F ++
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+R +VSWN+M+ + + L F +M S P+ T VSV+TA A L
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQM-RSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
W+H + + + +V ++T L+ MY KCGA+ +AR +FD M R+V +WN+MI GYG HG
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
G+ ALELF EM+K KPN TF+ V+SAC+H+G+V G F +M+ Y+IE ++HY
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 578
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
G +VDLL RAG + + + I + VK C H + E A+RL EL
Sbjct: 579 GAMVDLLGRAGRLNEAWDFIMQMPVK-PAVNVYGAMLGACQIHKNVNFAEKAAERLFELN 637
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSV 412
P D G +++L+N Y A W+ V +VRV + +GL+K S+V +++ +F + +
Sbjct: 638 PDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAH 697
Query: 413 HRKRIMYSMLSELGAHIKLSPAGSIEKDNF 442
+ +Y+ L +L HIK AG + N
Sbjct: 698 PDSKKIYAFLEKLICHIK--EAGYVPDTNL 725
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 144/305 (47%), Gaps = 40/305 (13%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L+F + L + ++ + G A ++F+ + + ++ M+ G+ V DL+
Sbjct: 59 LVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDK 118
Query: 73 ANELFERMPDRDV--VSWN-------CMIDGCVRVG------------------------ 99
A + F RM DV V +N C + +RVG
Sbjct: 119 ALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178
Query: 100 ------NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA 153
V A + F+RMP R++VSWN+++A + + L+M M E P+
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK-PSFI 237
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM 213
T+VSVL A + L +SVG +H + + V +ST L+ MY KCG+++ AR +FD M
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 214 PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGW 273
RNVVSWNSMI Y + N ++A+ +F +M +G KP D + + L AC G + G
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR 357
Query: 274 WYFDL 278
+ L
Sbjct: 358 FIHKL 362
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 251 bits (642), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 132/352 (37%), Positives = 207/352 (58%), Gaps = 2/352 (0%)
Query: 60 MIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
+I+ Y +G L++ +++F +P D V M+ C R G+V A + F MP R+ ++W
Sbjct: 149 LISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAW 208
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
N+M++ + + E L +F M G V N ++SVL+AC LG L G W HS+I+
Sbjct: 209 NAMISGYAQVGESREALNVFHLMQLEGVKV-NGVAMISVLSACTQLGALDQGRWAHSYIE 267
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
N IK+ V L+T L+ +Y KCG M+ A +VF M +NV +W+S + G ++G GEK LE
Sbjct: 268 RNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLE 327
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
LF M++ G PN TFV VL C+ G V EG +FD MR + IEP++EHYGC+VDL
Sbjct: 328 LFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLY 387
Query: 300 ARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPY 359
ARAG ++++ +I+ + +K + + ELG + +K+++ELE + G Y
Sbjct: 388 ARAGRLEDAVSIIQQMPMKPHAAVWSSLLHAS-RMYKNLELGVLASKKMLELETANHGAY 446
Query: 360 IMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYS 411
++LSN YA WD+V VR ++ KG++K+ SV+ + ++FV + S
Sbjct: 447 VLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKS 498
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 33/241 (13%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV-PNEATLVSVLTAC 162
A + +R + + NSM+ H ++ + + ++ SG + P+ T+ ++ AC
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC 118
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD------------------ 204
L G+ VH D + T L+++Y + G +D
Sbjct: 119 TGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRT 178
Query: 205 -------------LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKP 251
AR +F+ MP R+ ++WN+MI GY G +AL +F M+ +G K
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV 238
Query: 252 NDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
N + VLSACT G + +G W + R I+ V +VDL A+ G ++ + E+
Sbjct: 239 NGVAMISVLSACTQLGALDQGRWAHSYIER-NKIKITVRLATTLVDLYAKCGDMEKAMEV 297
Query: 312 I 312
Sbjct: 298 F 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 125/289 (43%), Gaps = 45/289 (15%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y+ G + +F+S D V +M+ + G+ ARKLF+ MP RD WN M
Sbjct: 152 LYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAM 211
Query: 61 IAGYVAVGDLEAANELFERMP----------------------------------DRDVV 86
I+GY VG+ A +F M +R+ +
Sbjct: 212 ISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKI 271
Query: 87 S-----WNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
++D + G++ A+E F M +NV +W+S L +CL++F
Sbjct: 272 KITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSL 331
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMYVKC 200
M + G PN T VSVL C+ +G + G +++ I+ + CL+ +Y +
Sbjct: 332 MKQDG-VTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARA 390
Query: 201 GAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALELFLEME 245
G ++ A + +MP++ + W+S++ ++ N G A + LE+E
Sbjct: 391 GRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELE 439
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 251 bits (642), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 221/389 (56%), Gaps = 6/389 (1%)
Query: 5 FGRVSD---ARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
+G+ D AR +F + VS+ +++ +VK+GE A+ +FD MP R++ +WN ++
Sbjct: 155 YGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALV 214
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
G V GDL A +LF+ MP RD++S+ MIDG + G++ A + F +V +W++
Sbjct: 215 DGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSA 274
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
++ + + E K+F EM + P+E +V +++AC+ +G + V S++
Sbjct: 275 LILGYAQNGQPNEAFKVFSEMC-AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQR 333
Query: 182 NIKVDV-LLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALEL 240
K + L+ M KCG MD A +F+EMP R++VS+ SM+ G +HG G +A+ L
Sbjct: 334 MNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRL 393
Query: 241 FLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLA 300
F +M +G P++ F +L C + +V EG YF+LMR+ Y+I +HY CIV+LL+
Sbjct: 394 FEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLS 453
Query: 301 RAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYI 360
R G +K + ELIK + + C+ H ++E+ E+VA+ L ELEP G Y+
Sbjct: 454 RTGKLKEAYELIKSMPFE-AHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYV 512
Query: 361 MLSNTYAAQGRWDDVERVRVMIREKGLQK 389
+LSN YAA RW DV +R + E G+ K
Sbjct: 513 LLSNIYAALDRWTDVAHLRDKMNENGITK 541
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 13/208 (6%)
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F R+P+ WN ++ + F+E + + MM +G A P+E T V+ C++ G+
Sbjct: 66 FERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQ 125
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
+ VG VH + DV++ T + Y KC + AR VF EMP RN VSW ++++
Sbjct: 126 VRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVA 185
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
Y G E+A +F M P+ N ++ ++ +G ++ FD M P
Sbjct: 186 YVKSGELEEAKSMFDLM----PERNLGSWNALVDGLVKSGDLVNAKKLFDEM-------P 234
Query: 288 K--VEHYGCIVDLLARAGLVKNSEELIK 313
K + Y ++D A+ G + ++ +L +
Sbjct: 235 KRDIISYTSMIDGYAKGGDMVSARDLFE 262
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 37/200 (18%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D+DVV +D + ++ A + F MP RN VSW +++ +V++ E MFD
Sbjct: 142 DKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDL 201
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMW---VHSFIKSNNI-----------KVDV 187
M E ++G W V +KS ++ K D+
Sbjct: 202 MPER-----------------------NLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDI 238
Query: 188 LLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK 247
+ T ++ Y K G M ARD+F+E +V +W+++I+GY +G +A ++F EM K
Sbjct: 239 ISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAK 298
Query: 248 GPKPNDATFVCVLSACTHAG 267
KP++ V ++SAC+ G
Sbjct: 299 NVKPDEFIMVGLMSACSQMG 318
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 251 bits (641), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 206/342 (60%), Gaps = 3/342 (0%)
Query: 60 MIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
+I Y G + A +F+ M D++ V+WN MIDG +R G V A + F++MP R+++SW
Sbjct: 115 IIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISW 174
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
+M+ V+ E L F EM SG P+ +++ L AC +LG LS G+WVH ++
Sbjct: 175 TAMINGFVKKGYQEEALLWFREMQISG-VKPDYVAIIAALNACTNLGALSFGLWVHRYVL 233
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
S + K +V +S L+ +Y +CG ++ AR VF M R VVSWNS+I+G+ +GN ++L
Sbjct: 234 SQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLV 293
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
F +M++KG KP+ TF L+AC+H G+V EG YF +M+ Y I P++EHYGC+VDL
Sbjct: 294 YFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLY 353
Query: 300 ARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDS-ELGEIVAKRLIELEPMDIGP 358
+RAG ++++ +L++ + +K C+ H ++ L E + K L +L
Sbjct: 354 SRAGRLEDALKLVQSMPMK-PNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSN 412
Query: 359 YIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
Y++LSN YAA G+W+ ++R ++ GL+K+ S + ++D
Sbjct: 413 YVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDD 454
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 126/274 (45%), Gaps = 42/274 (15%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MYS GR ARL+FD + V++N+MIDG++++G+ A K+FD+MP RD+ +W M
Sbjct: 118 MYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAM 177
Query: 61 IAGYVAVGDLEAANELFERM------PD------------------------RDVVSW-- 88
I G+V G E A F M PD R V+S
Sbjct: 178 INGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDF 237
Query: 89 -------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
N +ID R G V A + F M R VVSWNS++ + E L F +
Sbjct: 238 KNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRK 297
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMYVKC 200
M E G P+ T LTAC+H+G + G+ +K + I + CL+ +Y +
Sbjct: 298 MQEKGFK-PDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRA 356
Query: 201 GAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN 233
G ++ A + MP++ N V S++ HGN
Sbjct: 357 GRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGN 390
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 108/244 (44%), Gaps = 40/244 (16%)
Query: 105 LEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
++ N+ + VSW S + L R E K F +M +G PN T +++L+ C
Sbjct: 25 IQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAG-VEPNHITFIALLSGCGD 83
Query: 165 L--GKLSVGMWVHSF-IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
G ++G +H + K + V++ T ++ MY K G AR VFD M +N V+W
Sbjct: 84 FTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTW 143
Query: 222 NSMIMGYGLHG------------------------NG-------EKALELFLEMEKKGPK 250
N+MI GY G NG E+AL F EM+ G K
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 251 PNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPK--VEHYGCIVDLLARAGLVKNS 308
P+ + L+ACT+ G + G W + R V + + K V ++DL R G V+ +
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLW---VHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFA 260
Query: 309 EELI 312
++
Sbjct: 261 RQVF 264
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 251 bits (640), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 132/388 (34%), Positives = 215/388 (55%), Gaps = 6/388 (1%)
Query: 28 SMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLEAANELFERMPDR 83
S++D + K G+ A ++F+E P R + WN +I GY D+ A LF MP+R
Sbjct: 166 SLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER 225
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM 143
+ SW+ +I G V G + A + F MP +NVVSW +++ + + + + EM+
Sbjct: 226 NSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEML 285
Query: 144 ESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAM 203
E G PNE T+ +VL+AC+ G L G+ +H +I N IK+D + T L+ MY KCG +
Sbjct: 286 EKG-LKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGEL 344
Query: 204 DLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
D A VF M ++++SW +MI G+ +HG +A++ F +M G KP++ F+ VL+AC
Sbjct: 345 DCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
Query: 264 THAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXX 323
++ V G +FD MR Y IEP ++HY +VDLL RAG + + EL++ + +
Sbjct: 405 LNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPIN-PDLT 463
Query: 324 XXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIR 383
C H E V++ L+EL+P G YI L T+A++G DVE+ R+ ++
Sbjct: 464 TWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQ 523
Query: 384 EKGLQKEAASSVVHLEDFESKYFVKNYS 411
++ ++ S + L+ +K+ +YS
Sbjct: 524 KRIKERSLGWSYIELDGQLNKFSAGDYS 551
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 84/235 (35%), Gaps = 67/235 (28%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
+L F RN N+++ F ++ F M+ G P+ T VL + +
Sbjct: 79 SLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLG-VKPDRLTFPFVLKSNS 137
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE----------- 212
LG +G +H+ N + D + L+ MY K G + A VF+E
Sbjct: 138 KLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197
Query: 213 ------------------------MPVRNVVSWNSMIMGY-------------------- 228
MP RN SW+++I GY
Sbjct: 198 IWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKN 257
Query: 229 ---------GLHGNG--EKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
G G E A+ + EM +KG KPN+ T VLSAC+ +G + G
Sbjct: 258 VVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSG 312
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
+ D+ + LD +++D + K GE A +F M +D+ +W MI G+ G A
Sbjct: 319 ILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQA 378
Query: 74 NELFERM----PDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
+ F +M D V + ++ C+ V L L FF+ M
Sbjct: 379 IQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSM 420
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/435 (31%), Positives = 234/435 (53%), Gaps = 7/435 (1%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+YS G++ LF D+V+YN+MI G+ NGET + LF E+ + +
Sbjct: 265 LYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST 324
Query: 61 IAGYVAV-GDLEAANELFERMPDRDVVSWNCMIDGCV----RVGNVPLALEFFNRMPARN 115
+ V V G L + + +S + ++ + A + F+ P ++
Sbjct: 325 LVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKS 384
Query: 116 VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVH 175
+ SWN+M++ + + + + +F EM +S E PN T+ +L+ACA LG LS+G WVH
Sbjct: 385 LPSWNAMISGYTQNGLTEDAISLFREMQKS-EFSPNPVTITCILSACAQLGALSLGKWVH 443
Query: 176 SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGE 235
++S + + + +ST L+ MY KCG++ AR +FD M +N V+WN+MI GYGLHG G+
Sbjct: 444 DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQ 503
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
+AL +F EM G P TF+CVL AC+HAG+V EG F+ M Y EP V+HY C+
Sbjct: 504 EALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACM 563
Query: 296 VDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMD 355
VD+L RAG ++ + + I+ +S++ C H D+ L V+++L EL+P +
Sbjct: 564 VDILGRAGHLQRALQFIEAMSIE-PGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDN 622
Query: 356 IGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRK 415
+G +++LSN ++A + VR +++ L K +++ + + + + S +
Sbjct: 623 VGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQV 682
Query: 416 RIMYSMLSELGAHIK 430
+ +Y L +L ++
Sbjct: 683 KEIYEKLEKLEGKMR 697
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 155/332 (46%), Gaps = 24/332 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNC- 59
MY F RV DAR +FD D + +N+MI G+ KN + ++F RD+ N +C
Sbjct: 163 MYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF-----RDLINESCT 217
Query: 60 ---------MIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCV----RVGNVPLALE 106
++ + +L ++ S + ++ G + + G + +
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F ++V++N+M+ + L +F E+M SG A +TLVS++ HL
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG-ARLRSSTLVSLVPVSGHLM 336
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
+ +H + +N +ST L T+Y K ++ AR +FDE P +++ SWN+MI
Sbjct: 337 LIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMIS 393
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
GY +G E A+ LF EM+K PN T C+LSAC G + G W DL+R + E
Sbjct: 394 GYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST-DFE 452
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+ ++ + A+ G + + L ++ K
Sbjct: 453 SSIYVSTALIGMYAKCGSIAEARRLFDLMTKK 484
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%)
Query: 98 VGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
+G + A + F + +V +N ++ +S L +F + +S + PN +T
Sbjct: 65 LGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAF 124
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
++A + G +H + ++LL + ++ MY K ++ AR VFD MP ++
Sbjct: 125 AISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKD 184
Query: 218 VVSWNSMIMGY 228
+ WN+MI GY
Sbjct: 185 TILWNTMISGY 195
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 222/392 (56%), Gaps = 3/392 (0%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
G + +AR +FD D VS+N +I + K G+ G A LF MP++ +WN +I GYV
Sbjct: 184 GELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYV 243
Query: 66 AVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLAL 125
+++ A F+ MP ++ VSW MI G ++G+V A E F M ++ + +++M+A
Sbjct: 244 NCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIAC 303
Query: 126 HVRAKSFWECLKMFDEMMESGEAV-PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIK 184
+ + + LK+F +M+E + P+E TL SV++A + LG S G WV S+I + IK
Sbjct: 304 YTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIK 363
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
+D LLST L+ +Y+K G A +F + ++ VS+++MIMG G++G +A LF M
Sbjct: 364 IDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAM 423
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
+K PN TF +LSA +H+G+V EG+ F+ M+ +N+EP +HYG +VD+L RAG
Sbjct: 424 IEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGR 482
Query: 305 VKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSN 364
++ + ELIK + ++ H + E GEI ++LE G L+
Sbjct: 483 LEEAYELIKSMPMQPNAGVWGALLLAS-GLHNNVEFGEIACSHCVKLETDPTGYLSHLAM 541
Query: 365 TYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
Y++ GRWDD VR I+EK L K S V
Sbjct: 542 IYSSVGRWDDARTVRDSIKEKKLCKTLGCSWV 573
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 40/199 (20%)
Query: 60 MIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
++ Y +G +E A + F+ + +++ VSWN ++ G + G + A F+++P ++ VSW
Sbjct: 145 LVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSW 204
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
N +++ + + +F M A N
Sbjct: 205 NLIISSYAKKGDMGNACSLFSAMPLKSPASWN---------------------------- 236
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
L+ YV C M LAR FD MP +N VSW +MI GY G+ + A E
Sbjct: 237 ------------ILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEE 284
Query: 240 LFLEMEKKGPKPNDATFVC 258
LF M KK DA C
Sbjct: 285 LFRLMSKKDKLVYDAMIAC 303
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 105 LEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
L+ FN + SW ++ + + F E + ++ +M SG P+ + SVL AC
Sbjct: 61 LKGFN---GHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSG-IPPSSHAVTSVLRACGK 116
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSM 224
+ + G +H+ N + V + T L+ +Y + G ++LA+ FD++ +N VSWNS+
Sbjct: 117 MENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSL 176
Query: 225 IMGYGLHGNGEKALELFLEMEKK 247
+ GY G ++A +F ++ +K
Sbjct: 177 LHGYLESGELDEARRVFDKIPEK 199
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 232/414 (56%), Gaps = 23/414 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTL---DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW-N 56
+Y+ R+ AR +F+ L L +VS+ +++ + +NGE A ++F +M DV +
Sbjct: 163 LYAKCRRLGSARTVFEG-LPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPD 221
Query: 57 WNCMIA---GYVAVGDLEAANEL--------FERMPDRDVVSWNCMIDGCVRVGNVPLAL 105
W +++ + + DL+ + E PD ++S N M C G V A
Sbjct: 222 WVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL-LISLNTMYAKC---GQVATAK 277
Query: 106 EFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL 165
F++M + N++ WN+M++ + + E + MF EM+ + P+ ++ S ++ACA +
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK-DVRPDTISITSAISACAQV 336
Query: 166 GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI 225
G L ++ ++ ++ + DV +S+ L+ M+ KCG+++ AR VFD R+VV W++MI
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNI 285
+GYGLHG +A+ L+ ME+ G PND TF+ +L AC H+GMV EGWW+F+ M + I
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKI 455
Query: 286 EPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVA 345
P+ +HY C++DLL RAG + + E+IK + V+ C H ELGE A
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ-PGVTVWGALLSACKKHRHVELGEYAA 514
Query: 346 KRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLE 399
++L ++P + G Y+ LSN YAA WD V VRV ++EKGL K+ S V +
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR 568
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 141/315 (44%), Gaps = 45/315 (14%)
Query: 37 GETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP--------------- 81
G+ AR++FD++P ++ WN +I GY + A ++ M
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 82 ------------------------DRDVVSWNCMI---DGCVRVGNVPLALEFFNRMPAR 114
D DV N +I C R+G+ E +P R
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP-LPER 185
Query: 115 NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV 174
+VSW ++++ + + E L++F +M + + P+ LVSVL A L L G +
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKM-DVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 175 HSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNG 234
H+ + ++++ L L TMY KCG + A+ +FD+M N++ WN+MI GY +G
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304
Query: 235 EKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGC 294
+A+++F EM K +P+ + +SAC G + + ++ + R + V
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS-DYRDDVFISSA 363
Query: 295 IVDLLARAGLVKNSE 309
++D+ A+ G V+ +
Sbjct: 364 LIDMFAKCGSVEGAR 378
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 3/176 (1%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
+I G++ A + F+ +P + WN+++ + R F + L M+ M + P
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM-QLARVSP 117
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
+ T +L AC+ L L +G +VH+ + DV + L+ +Y KC + AR VF
Sbjct: 118 DSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177
Query: 211 DEMPV--RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
+ +P+ R +VSW +++ Y +G +ALE+F +M K KP+ V VL+A T
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFT 233
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
++ + + +++ S++ + H +L +H+ + ++ L T L+ G
Sbjct: 11 LLYTNSGIHSDSFYASLIDSATHKAQLK---QIHARLLVLGLQFSGFLITKLIHASSSFG 67
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+ AR VFD++P + WN++I GY + + + AL ++ M+ P+ TF +L
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
AC+ G + + R V+ +V G D+ + GL+
Sbjct: 128 ACS-------GLSHLQMGRFVH---AQVFRLGFDADVFVQNGLI 161
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 231/404 (57%), Gaps = 11/404 (2%)
Query: 5 FGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WNWNCM 60
FG + R +F+ D+VSYN++I G+ ++G A ++ EM D+ + + +
Sbjct: 190 FG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSV 248
Query: 61 IAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV 116
+ + D+ E+ + D DV + ++D + + + F+R+ R+
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 308
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
+SWNS++A +V+ + E L++F +M+ + + P SV+ ACAHL L +G +H
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMV-TAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
++ ++ +++ L+ MY KCG + AR +FD M V + VSW ++IMG+ LHG+G +
Sbjct: 368 YVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHE 427
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIV 296
A+ LF EM+++G KPN FV VL+AC+H G+V E W YF+ M +VY + ++EHY +
Sbjct: 428 AVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA 487
Query: 297 DLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDI 356
DLL RAG ++ + I + V+ C+ H + EL E VA+++ ++ ++
Sbjct: 488 DLLGRAGKLEEAYNFISKMCVE-PTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENM 546
Query: 357 GPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
G Y+++ N YA+ GRW ++ ++R+ +R+KGL+K+ A S + +++
Sbjct: 547 GAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKN 590
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 7/270 (2%)
Query: 53 DVWNWNC---MIAGYVAVGDLEAANELFERMPDRDVVSWN--CMIDGCVRVGNVPLALEF 107
D++ N M A + +G + +F+ MP R S + + C+ +
Sbjct: 139 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRV 198
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F MP ++VVS+N+++A + ++ + + L+M EM + + P+ TL SVL +
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTT-DLKPDSFTLSSVLPIFSEYVD 257
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
+ G +H ++ I DV + + L+ MY K ++ + VF + R+ +SWNS++ G
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 317
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
Y +G +AL LF +M KP F V+ AC H + G + R
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR-GGFGS 376
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSV 317
+ +VD+ ++ G +K + ++ ++V
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNV 406
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 115/247 (46%), Gaps = 11/247 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW----N 56
MY+ R+ D+ +F D +S+NS++ G+V+NG A +LF +M V
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 57 WNCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ +I + L +L + ++ + ++D + GN+ A + F+RM
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG- 171
+ VSW +++ H E + +F+EM G PN+ V+VLTAC+H+G +
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG-VKPNQVAFVAVLTACSHVGLVDEAW 464
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS-WNSMIMGYGL 230
+ +S K + ++ + + + G ++ A + +M V S W++++ +
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSV 524
Query: 231 HGNGEKA 237
H N E A
Sbjct: 525 HKNLELA 531
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 96/241 (39%), Gaps = 38/241 (15%)
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F + + V++W S++ F + L F EM SG P+ SVL +C +
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC-PDHNVFPSVLKSCTMMMD 120
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAM------------------------ 203
L G VH FI + D+ L+ MY K M
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180
Query: 204 ------------DLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKP 251
D R VF+ MP ++VVS+N++I GY G E AL + EM KP
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240
Query: 252 NDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
+ T VL + V++G + R I+ V +VD+ A++ +++SE +
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIR-KGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 312 I 312
Sbjct: 300 F 300
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/361 (35%), Positives = 212/361 (58%), Gaps = 2/361 (0%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
DV+ N ++ Y G + AA +F +M RDVVSW M+ G + G V A E F+ MP
Sbjct: 151 DVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMP 210
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
RN+ +W+ M+ + + F + + +F+ M G V NE +VSV+++CAHLG L G
Sbjct: 211 HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREG-VVANETVMVSVISSCAHLGALEFGE 269
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+ ++ +++ V+++L T L+ M+ +CG ++ A VF+ +P + +SW+S+I G +HG
Sbjct: 270 RAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHG 329
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
+ KA+ F +M G P D TF VLSAC+H G+V +G ++ M++ + IEP++EHY
Sbjct: 330 HAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHY 389
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
GCIVD+L RAG + +E I + VK C + ++E+ E V LI+++
Sbjct: 390 GCIVDMLGRAGKLAEAENFILKMHVK-PNAPILGALLGACKIYKNTEVAERVGNMLIKVK 448
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSV 412
P G Y++LSN YA G+WD +E +R M++EK ++K S++ ++ +K+ + +
Sbjct: 449 PEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQK 508
Query: 413 H 413
H
Sbjct: 509 H 509
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 47/259 (18%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ G ++ A +F D+VS+ SM+ G+ K G AR++FDEMP R+++ W+ M
Sbjct: 161 MYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIM 220
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVS--------------------------------- 87
I GY E A +LFE M VV+
Sbjct: 221 INGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHM 280
Query: 88 ------WNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM---LALHVRAKSFWECLKM 138
++D R G++ A+ F +P + +SW+S+ LA+H A + +
Sbjct: 281 TVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAH---KAMHY 337
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN-IKVDVLLSTCLLTMY 197
F +M+ G +P + T +VL+AC+H G + G+ ++ +K ++ I+ + C++ M
Sbjct: 338 FSQMISLG-FIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDML 396
Query: 198 VKCGAMDLARDVFDEMPVR 216
+ G + A + +M V+
Sbjct: 397 GRAGKLAEAENFILKMHVK 415
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 32/200 (16%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
A F+++ N+ +N ++ + + +M++S P+ T ++ A +
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKS-RIWPDNITFPFLIKASS 128
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
+ + VG HS I + DV + L+ MY CG + A +F +M R+VVSW S
Sbjct: 129 EMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTS 188
Query: 224 MIMGYGLHG------------------------NG-------EKALELFLEMEKKGPKPN 252
M+ GY G NG EKA++LF M+++G N
Sbjct: 189 MVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVAN 248
Query: 253 DATFVCVLSACTHAGMVMEG 272
+ V V+S+C H G + G
Sbjct: 249 ETVMVSVISSCAHLGALEFG 268
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 245/451 (54%), Gaps = 15/451 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVS--YNSMIDGHVKNGETGAARKLFDEMPVRDVWNWN 58
MY G V+DAR +F+ + +S YN++I G+ N + A +F M V +
Sbjct: 97 MYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDS 156
Query: 59 ---------CMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFN 109
C + Y+ +G + + D +V N I ++ G+V F+
Sbjct: 157 VTMLGLVPLCTVPEYLWLGR-SLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFD 215
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
MP + +++WN++++ + + ++ L+++++M SG P+ TLVSVL++CAHLG
Sbjct: 216 EMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG-VCPDPFTLVSVLSSCAHLGAKK 274
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
+G V ++SN +V +S ++MY +CG + AR VFD MPV+++VSW +MI YG
Sbjct: 275 IGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYG 334
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKV 289
+HG GE L LF +M K+G +P+ A FV VLSAC+H+G+ +G F M+R Y +EP
Sbjct: 335 MHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGP 394
Query: 290 EHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
EHY C+VDLL RAG + + E I+ + V+ C H + ++ E+ ++I
Sbjct: 395 EHYSCLVDLLGRAGRLDEAMEFIESMPVE-PDGAVWGALLGACKIHKNVDMAELAFAKVI 453
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKN 409
E EP +IG Y+++SN Y+ + + R+RVM+RE+ +K+ S V + + +
Sbjct: 454 EFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGD 513
Query: 410 YSVHRKRIMYSMLSELGAHIKLSPAGSIEKD 440
S + ++ ML EL + + AG+++ D
Sbjct: 514 RSHEQTEEVHRMLDELETSV-MELAGNMDCD 543
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
WN L F E + ++ M+ SG + P+ + +L +CA L G +H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSS-PDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS--WNSMIMGYGLHGNGEK 236
+ + + T L++MY KCG + AR VF+E P + +S +N++I GY +
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACT 264
A +F M++ G + T + ++ CT
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCT 167
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 143/417 (34%), Positives = 222/417 (53%), Gaps = 39/417 (9%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D+ NS++ + GE+ A K+F EMPVRDV +W +I G+ G + A + F +M
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD 199
Query: 82 -DRDVVSWNCMIDGCVRVGNVPL-----------------------------------AL 105
+ ++ ++ C++ RVG + L A+
Sbjct: 200 VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAM 259
Query: 106 EFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL 165
F + ++ VSWNSM++ V + E + +F M S P+ L SVL+ACA L
Sbjct: 260 RVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASL 319
Query: 166 GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI 225
G + G WVH +I + IK D + T ++ MY KCG ++ A ++F+ + +NV +WN+++
Sbjct: 320 GAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALL 379
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR-RVYN 284
G +HG+G ++L F EM K G KPN TF+ L+AC H G+V EG YF M+ R YN
Sbjct: 380 GGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYN 439
Query: 285 IEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIV 344
+ PK+EHYGC++DLL RAGL+ + EL+K + VK EL + +
Sbjct: 440 LFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEI 499
Query: 345 AKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDF 401
+++E D G Y++LSN +AA RWDDV R+R +++ KG+ K SS ++E F
Sbjct: 500 LDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSS--YIEKF 554
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
S+N++L+ + + + + +G + P+ T V AC + G +H
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFS-PDMFTFPPVFKACGKFSGIREGKQIHGI 131
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
+ D+ + L+ Y CG A VF EMPVR+VVSW +I G+ G ++A
Sbjct: 132 VTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEA 191
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
L+ F +M+ +PN AT+VCVL + G + G
Sbjct: 192 LDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLG 223
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 14/228 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR-----DVW 55
MY ++SDA +F D VS+NSMI G V + A LF M D
Sbjct: 248 MYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGH 307
Query: 56 NWNCMIAGYVAVGDLEAANELFERMPDRDVVSWN-----CMIDGCVRVGNVPLALEFFNR 110
+++ ++G ++ + E + + W+ ++D + G + ALE FN
Sbjct: 308 ILTSVLSACASLGAVDHGRWVHEYILTAG-IKWDTHIGTAIVDMYAKCGYIETALEIFNG 366
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
+ ++NV +WN++L E L+ F+EM++ G PN T ++ L AC H G +
Sbjct: 367 IRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFK-PNLVTFLAALNACCHTGLVDE 425
Query: 171 GMWVHSFIKSN--NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
G +KS N+ + C++ + + G +D A ++ MPV+
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVK 473
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 244 bits (623), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 135/407 (33%), Positives = 225/407 (55%), Gaps = 9/407 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MYS G + A+ +F +VSY SMI G+ + G G A KLF+EM DV+
Sbjct: 340 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRD----VVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ L+ + E + + D + N ++D + G++ A F+ M
Sbjct: 400 VTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
++++SWN+++ + + E L +F+ ++E P+E T+ VL ACA L G
Sbjct: 460 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H +I N D ++ L+ MY KCGA+ LA +FD++ +++VSW MI GYG+HG
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 579
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
G++A+ LF +M + G + ++ +FV +L AC+H+G+V EGW +F++MR IEP VEHY
Sbjct: 580 FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY 639
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
CIVD+LAR G + + I+ + + C H D +L E VA+++ ELE
Sbjct: 640 ACIVDMLARTGDLIKAYRFIENMPIP-PDATIWGALLCGCRIHHDVKLAEKVAEKVFELE 698
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLE 399
P + G Y++++N YA +W+ V+R+R I ++GL+K S + ++
Sbjct: 699 PENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIK 745
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 168/328 (51%), Gaps = 14/328 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MY+ G + +A +FD + +N +++ K+G+ + LF +M D +
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 57 WNCMIAGYVAVGDLEAANELF-----ERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
++C+ + ++ + +L +R+ V N ++ ++ V A + F+ M
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEM 256
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
R+V+SWNS++ +V + L +F +M+ SG + + AT+VSV CA +S+G
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI-DLATIVSVFAGCADSRLISLG 315
Query: 172 MWVHSF-IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
VHS +K+ + D +T LL MY KCG +D A+ VF EM R+VVS+ SMI GY
Sbjct: 316 RAVHSIGVKACFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 374
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
G +A++LF EME++G P+ T VL+ C ++ EG + ++ ++ +
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE-NDLGFDIF 433
Query: 291 HYGCIVDLLARAGLVKNSEELIKYVSVK 318
++D+ A+ G ++ +E + + VK
Sbjct: 434 VSNALMDMYAKCGSMQEAELVFSEMRVK 461
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
R+V N+ L + + +K+ + SG+ + TL SVL CA L G
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKL---LCVSGKWDIDPRTLCSVLQLCADSKSLKDGKE 115
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
V +FI+ N +D L + L MY CG + A VFDE+ + + WN ++ G+
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACT-----HAGMVMEGW 273
++ LF +M G + + TF CV + + H G + G+
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGF 220
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 224/402 (55%), Gaps = 11/402 (2%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW-NWNCM 60
YS G A LFD + D+V++ +MIDG V+NG A F EM V N +
Sbjct: 148 YSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTV 207
Query: 61 IAGYVAVGDLE------AANELFERMP--DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ A G +E + + L+ DV + ++D + A + F+ MP
Sbjct: 208 VSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP 267
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+RNVV+W +++A +V+++ F + + +F+EM++S + PNE TL SVL+ACAH+G L G
Sbjct: 268 SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKS-DVAPNEKTLSSVLSACAHVGALHRGR 326
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
VH ++ N+I+++ T L+ +YVKCG ++ A VF+ + +NV +W +MI G+ HG
Sbjct: 327 RVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHG 386
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
A +LF M PN+ TF+ VLSAC H G+V EG F M+ +N+EPK +HY
Sbjct: 387 YARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY 446
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
C+VDL R GL++ ++ LI+ + ++ C H D ELG+ A R+I+L+
Sbjct: 447 ACMVDLFGRKGLLEEAKALIERMPME-PTNVVWGALFGSCLLHKDYELGKYAASRVIKLQ 505
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
P G Y +L+N Y+ WD+V RVR ++++ + K S
Sbjct: 506 PSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFS 547
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 118/234 (50%), Gaps = 15/234 (6%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D D N +I G G A F+ ++VV+W +M+ VR S E + F E
Sbjct: 135 DSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE 194
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS-FIKSNNIKVDVLLSTCLLTMYVKC 200
M ++G A NE T+VSVL A + + G VH ++++ +K DV + + L+ MY KC
Sbjct: 195 MKKTGVAA-NEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKC 253
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
D A+ VFDEMP RNVV+W ++I GY +K + +F EM K PN+ T VL
Sbjct: 254 SCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVL 313
Query: 261 SACTHAGMVMEGWWYFDLMRRVY------NIEPKVEHYGCIVDLLARAGLVKNS 308
SAC H G + G RRV+ +IE ++DL + G ++ +
Sbjct: 314 SACAHVGALHRG-------RRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEA 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 118/249 (47%), Gaps = 19/249 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW----N 56
MY DA+ +FD + ++V++ ++I G+V++ +F+EM DV
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKT 308
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDV----VSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ +++ VG L + M + + +ID V+ G + A+ F R+
Sbjct: 309 LSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH 368
Query: 113 ARNVVSWNSML---ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
+NV +W +M+ A H A+ + +F M+ S PNE T ++VL+ACAH G +
Sbjct: 369 EKNVYTWTAMINGFAAHGYAR---DAFDLFYTML-SSHVSPNEVTFMAVLSACAHGGLVE 424
Query: 170 VGMWVHSFIKSN-NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR--NVVSWNSMIM 226
G + +K N++ C++ ++ + G ++ A+ + + MP+ NVV W ++
Sbjct: 425 EGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVV-WGALFG 483
Query: 227 GYGLHGNGE 235
LH + E
Sbjct: 484 SCLLHKDYE 492
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
M +P+ T +L A L + S H+ I + D + L++ Y G
Sbjct: 95 MRRNGVIPSRHTFPPLLKAVFKL-RDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGL 153
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
D A +FD ++VV+W +MI G+ +G+ +A+ F+EM+K G N+ T V VL A
Sbjct: 154 FDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKA 213
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/449 (31%), Positives = 227/449 (50%), Gaps = 40/449 (8%)
Query: 21 LDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM 80
LD ++++D + K AR++F +MP + + WN MI GYVA GD ++ E+ RM
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 81 ------PDRDVVSW--------------------------------NC-MIDGCVRVGNV 101
P + ++ NC +ID + G
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360
Query: 102 PLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
LA F++ SWN M++ ++ ++++ ++++D+M+ G P+ T SVL A
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG-VKPDVVTFTSVLPA 419
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
C+ L L G +H I + ++ D LL + LL MY KCG A +F+ +P ++VVSW
Sbjct: 420 CSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSW 479
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
MI YG HG +AL F EM+K G KP+ T + VLSAC HAG++ EG +F MR
Sbjct: 480 TVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRS 539
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELG 341
Y IEP +EHY C++D+L RAG + + E+I+ C H++ LG
Sbjct: 540 KYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLG 599
Query: 342 EIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDF 401
+ +A+ L+E P D Y++L N YA+ WD RVR+ ++E GL+K+ S + + D
Sbjct: 600 DRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDK 659
Query: 402 ESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
+F ++ S R +Y L+ L H++
Sbjct: 660 VCHFFAEDRSHLRAENVYECLALLSGHME 688
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 146/314 (46%), Gaps = 44/314 (14%)
Query: 2 YSVFGRVSDAR----LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNW 57
Y GR R L+ S D+V +S++ + K + ++FDEMP RDV +W
Sbjct: 117 YGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASW 176
Query: 58 NCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRV--------------- 98
N +I+ + G+ E A ELF RM + + VS I C R+
Sbjct: 177 NTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVK 236
Query: 99 --------------------GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKM 138
+ +A E F +MP +++V+WNSM+ +V C+++
Sbjct: 237 KGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEI 296
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
+ M+ G P++ TL S+L AC+ L G ++H ++ + + D+ ++ L+ +Y
Sbjct: 297 LNRMIIEGTR-PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYF 355
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
KCG +LA VF + SWN MI Y GN KA+E++ +M G KP+ TF
Sbjct: 356 KCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTS 415
Query: 259 VLSACTHAGMVMEG 272
VL AC+ + +G
Sbjct: 416 VLPACSQLAALEKG 429
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 155/327 (47%), Gaps = 45/327 (13%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR-DVWNWNCMIAGYVAVGDLEAANELF 77
L D+V S+I+ + + +AR +F+ +R DV+ WN +++GY E+F
Sbjct: 35 LRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVF 94
Query: 78 ERM-------PDR---------------------------------DVVSWNCMIDGCVR 97
+R+ PD DVV + ++ +
Sbjct: 95 KRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAK 154
Query: 98 VGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
+L+ F+ MP R+V SWN++++ ++ + L++F M SG PN +L
Sbjct: 155 FNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE-PNSVSLTV 213
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
++AC+ L L G +H ++D +++ L+ MY KC +++AR+VF +MP ++
Sbjct: 214 AISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKS 273
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
+V+WNSMI GY G+ + +E+ M +G +P+ T +L AC+ + ++ G +
Sbjct: 274 LVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHG 333
Query: 278 -LMRRVYNIEPKVEHYGCIVDLLARAG 303
++R V N + V ++DL + G
Sbjct: 334 YVIRSVVNADIYVN--CSLIDLYFKCG 358
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 57/311 (18%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
S + D+ S+ID + K GE A +F + +WN MI+ Y++VG+ A E+
Sbjct: 338 SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEV 397
Query: 77 FERMPD----RDVVSWNCMIDGCVRV---------------------------------- 98
+++M DVV++ ++ C ++
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSK 457
Query: 99 -GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
GN A FN +P ++VVSW M++ + E L FDEM + G P+ TL++
Sbjct: 458 CGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG-LKPDGVTLLA 516
Query: 158 VLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP-- 214
VL+AC H G + G+ S ++S I+ + +C++ + + G + A ++ + P
Sbjct: 517 VLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPET 576
Query: 215 VRNVVSWNSMIMGYGL---HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
N +++ L H G++ L +E P+DA+ VL +G E
Sbjct: 577 SDNAELLSTLFSACCLHLEHSLGDRIARLLVE-----NYPDDASTYMVLFNLYASG---E 628
Query: 272 GWWYFDLMRRV 282
W D RRV
Sbjct: 629 SW---DAARRV 636
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 216/402 (53%), Gaps = 14/402 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPV----RDVWN 56
MYS G V AR +FD + + +N++ G L+ +M D +
Sbjct: 121 MYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFT 180
Query: 57 WNCMIAGYVA----VGDLEAANELFERMPDRDVVS----WNCMIDGCVRVGNVPLALEFF 108
+ ++ VA V L E+ + R S ++D R G V A F
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF 240
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM-ESGEAVPNEATLVSVLTACAHLGK 167
MP RNVVSW++M+A + + +E L+ F EMM E+ ++ PN T+VSVL ACA L
Sbjct: 241 GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA 300
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L G +H +I + + + + L+TMY +CG +++ + VFD M R+VVSWNS+I
Sbjct: 301 LEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISS 360
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
YG+HG G+KA+++F EM G P TFV VL AC+H G+V EG F+ M R + I+P
Sbjct: 361 YGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKP 420
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
++EHY C+VDLL RA + + ++++ + + C H + EL E ++R
Sbjct: 421 QIEHYACMVDLLGRANRLDEAAKMVQDMRTE-PGPKVWGSLLGSCRIHGNVELAERASRR 479
Query: 348 LIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQK 389
L LEP + G Y++L++ YA WD+V+RV+ ++ +GLQK
Sbjct: 480 LFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQK 521
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 7/166 (4%)
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
S E+ P++ T ++ C H LS + VH I N D L+T L+ MY G++D
Sbjct: 70 SQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVD 129
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV-----CV 259
AR VFD+ R + WN++ L G+GE+ L L+ +M + G + + T+ CV
Sbjct: 130 YARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACV 189
Query: 260 LSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
S CT ++ + L RR Y+ V +VD+ AR G V
Sbjct: 190 ASECTVNHLMKGKEIHAHLTRRGYS--SHVYIMTTLVDMYARFGCV 233
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 224/422 (53%), Gaps = 5/422 (1%)
Query: 12 RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNW---NCMIAGYVAVG 68
R + S + LD +Y S+I G +++ + R+ +++ N +++ Y G
Sbjct: 275 RRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCG 334
Query: 69 DLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVR 128
+ A +FE+MP +D+VSWN ++ G V G++ A F M +N++SW M++
Sbjct: 335 KFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAE 394
Query: 129 AKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVL 188
E LK+F M G P + + +CA LG G H+ + +
Sbjct: 395 NGFGEEGLKLFSCMKREGFE-PCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLS 453
Query: 189 LSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
L+TMY KCG ++ AR VF MP + VSWN++I G HG+G +A++++ EM KKG
Sbjct: 454 AGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKG 513
Query: 249 PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNS 308
+P+ T + VL+AC+HAG+V +G YFD M VY I P +HY ++DLL R+G ++
Sbjct: 514 IRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDA 573
Query: 309 EELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAA 368
E +I+ + K C H + ELG I A +L L P G Y++LSN +AA
Sbjct: 574 ESVIESLPFK-PTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAA 632
Query: 369 QGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAH 428
G+W++V RVR ++R++G++KE A S + +E + V + S +Y L +LG
Sbjct: 633 TGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKE 692
Query: 429 IK 430
++
Sbjct: 693 MR 694
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 127/258 (49%), Gaps = 17/258 (6%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPD--RD 84
N +ID + K+ E AR+LFDE+ D M++GY A GD+ A +FE+ P RD
Sbjct: 53 NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRD 112
Query: 85 VVSWNCMIDGCVRVGNVPLALEFFNRMPARNV----VSWNSMLA-LHVRAKSFWECLKMF 139
V +N MI G + A+ F +M ++ S+LA L + A +C++
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFH 172
Query: 140 DEMMESGEAVPNEAT--LVSVLTACAHLGKLSVGMWVHSFIKSNN--IKVDVLLSTCLLT 195
++SG + LVSV + CA L +HS K + ++ D T ++T
Sbjct: 173 AAALKSGAGYITSVSNALVSVYSKCASSPSL-----LHSARKVFDEILEKDERSWTTMMT 227
Query: 196 MYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDA 254
YVK G DL ++ + M +V++N+MI GY G ++ALE+ M G + ++
Sbjct: 228 GYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEF 287
Query: 255 TFVCVLSACTHAGMVMEG 272
T+ V+ AC AG++ G
Sbjct: 288 TYPSVIRACATAGLLQLG 305
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 42/276 (15%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y G+ +AR +F+ DLVS+N+++ G+V +G G A+ +F EM +++ +W M
Sbjct: 329 LYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIM 388
Query: 61 IAGYVAVGDLEAANELFERMP--------------------------------------- 81
I+G G E +LF M
Sbjct: 389 ISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGF 448
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D + + N +I + G V A + F MP + VSWN+++A + E + +++E
Sbjct: 449 DSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEE 508
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVG-MWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
M++ G P+ TL++VLTAC+H G + G + S I L+ + +
Sbjct: 509 MLKKG-IRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRS 567
Query: 201 GAMDLARDVFDEMPVRNVVS-WNSMIMGYGLHGNGE 235
G A V + +P + W +++ G +HGN E
Sbjct: 568 GKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNME 603
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 241 bits (616), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 231/420 (55%), Gaps = 8/420 (1%)
Query: 24 VSYNSMIDGHVKNGETGAARKL----FDEMPVRDVWNWNCMIAGYVAVGDLEAANELFER 79
++Y S+ + + G+ R+L E D + N M+ YV G L A +F
Sbjct: 127 LTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLG 186
Query: 80 MPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMF 139
M DVV+WN MI G + G + A F+ MP RN VSWNSM++ VR F + L MF
Sbjct: 187 MIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMF 246
Query: 140 DEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVK 199
EM E + P+ T+VS+L ACA+LG G W+H +I N +++ ++ T L+ MY K
Sbjct: 247 REMQEK-DVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCK 305
Query: 200 CGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCV 259
CG ++ +VF+ P + + WNSMI+G +G E+A++LF E+E+ G +P+ +F+ V
Sbjct: 306 CGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGV 365
Query: 260 LSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKX 319
L+AC H+G V +F LM+ Y IEP ++HY +V++L AGL++ +E LIK + V+
Sbjct: 366 LTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVE- 424
Query: 320 XXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVR 379
C + E+ + AK L +L+P + Y++LSN YA+ G +++ R
Sbjct: 425 EDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQR 484
Query: 380 VMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRI-MYSMLSELGAHIKLSPAGSIE 438
++++E+ ++KE S + + DFE F+ H K +YS+L L + +G E
Sbjct: 485 LLMKERQMEKEVGCSSIEV-DFEVHEFISCGGTHPKSAEIYSLLDILNWDVSTIKSGFAE 543
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 44/279 (15%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY G + +A +F + D+V++NSMI G K G A+ LFDEMP R+ +WN M
Sbjct: 170 MYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSM 229
Query: 61 IAGYVAVGDLEAANELFERMPDRDV----------------------------------- 85
I+G+V G + A ++F M ++DV
Sbjct: 230 ISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRF 289
Query: 86 ----VSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWE-CLKMFD 140
+ +ID + G + L F P + + WNSM+ L + F E + +F
Sbjct: 290 ELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMI-LGLANNGFEERAMDLFS 348
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN-IKVDVLLSTCLLTMYVK 199
E+ SG P+ + + VLTACAH G++ +K I+ + T ++ +
Sbjct: 349 ELERSG-LEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGG 407
Query: 200 CGAMDLARDVFDEMPV-RNVVSWNSMIMGYGLHGNGEKA 237
G ++ A + MPV + V W+S++ GN E A
Sbjct: 408 AGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 35/245 (14%)
Query: 95 CVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV-PNEA 153
C ++ A F R+ +N WN+++ R+ + +F +M+ S +V P
Sbjct: 68 CASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRL 127
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM 213
T SV A LG+ G +H + ++ D + +L MYV CG + A +F M
Sbjct: 128 TYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM 187
Query: 214 PVRNVVSWNSMIMGY---GL----------------------------HGNGEKALELFL 242
+VV+WNSMIMG+ GL +G + AL++F
Sbjct: 188 IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFR 247
Query: 243 EMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD-LMRRVYNIEPKVEHYGCIVDLLAR 301
EM++K KP+ T V +L+AC + G +G W + ++R + + V ++D+ +
Sbjct: 248 EMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIV--VTALIDMYCK 305
Query: 302 AGLVK 306
G ++
Sbjct: 306 CGCIE 310
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 241 bits (616), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 234/452 (51%), Gaps = 44/452 (9%)
Query: 4 VFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAG 63
+ GR+ A +L S D+V N++++ + K G ARK+F++MP RD W +I+G
Sbjct: 77 IQGRIVHAHIL-QSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135
Query: 64 YVAVGDLEAANELFERM------PDRDVVSW----------------------NCMIDGC 95
Y A F +M P+ +S C D
Sbjct: 136 YSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 195
Query: 96 VRVGNVPLALE-----------FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMME 144
V VG+ L L F+ + +RN VSWN+++A H R + L++F M+
Sbjct: 196 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLR 255
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
G P+ + S+ AC+ G L G WVH+++ + K+ LL MY K G++
Sbjct: 256 DG-FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 314
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
AR +FD + R+VVSWNS++ Y HG G++A+ F EM + G +PN+ +F+ VL+AC+
Sbjct: 315 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 374
Query: 265 HAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXX 324
H+G++ EGW Y++LM++ I P+ HY +VDLL RAG + + I+ + ++
Sbjct: 375 HSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIE-PTAAI 432
Query: 325 XXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIRE 384
C H ++ELG A+ + EL+P D GP+++L N YA+ GRW+D RVR ++E
Sbjct: 433 WKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKE 492
Query: 385 KGLQKEAASSVVHLEDFESKYFVKNYSVHRKR 416
G++KE A S V +E+ FV N H +R
Sbjct: 493 SGVKKEPACSWVEIEN-AIHMFVANDERHPQR 523
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 15/265 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRD-----VW 55
+Y+ +G + DA+L+FD+ + + VS+N++I GH + T A +LF M +RD +
Sbjct: 205 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM-LRDGFRPSHF 263
Query: 56 NWNCMIAGYVAVGDLEAANELFERM--PDRDVVSW--NCMIDGCVRVGNVPLALEFFNRM 111
++ + + G LE + M +V++ N ++D + G++ A + F+R+
Sbjct: 264 SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
R+VVSWNS+L + + E + F+EM G PNE + +SVLTAC+H G L G
Sbjct: 324 AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG-IRPNEISFLSVLTACSHSGLLDEG 382
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS-WNSMIMGYGL 230
+ +K + I + ++ + + G ++ A +EMP+ + W +++ +
Sbjct: 383 WHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRM 442
Query: 231 HGN---GEKALELFLEMEKKGPKPN 252
H N G A E E++ P P+
Sbjct: 443 HKNTELGAYAAEHVFELDPDDPGPH 467
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Query: 146 GEAVPNEATLV-SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
G +P + ++L C L G VH+ I + + D+++ LL MY KCG+++
Sbjct: 53 GSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLE 112
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
AR VF++MP R+ V+W ++I GY H AL F +M + G PN+ T V+ A
Sbjct: 113 EARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 241 bits (615), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 210/386 (54%), Gaps = 4/386 (1%)
Query: 50 PVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFN 109
P+ + C I +G L+ ++F D + ++D N A + F+
Sbjct: 113 PLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFD 172
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMES--GEAVPNEATLVSVLTACAHLGK 167
+P R+ VSWN + + ++R K + L +FD+M G P+ T + L ACA+LG
Sbjct: 173 EIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGA 232
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L G VH FI N + + LS L++MY +CG+MD A VF M RNVVSW ++I G
Sbjct: 233 LDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISG 292
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR-VYNIE 286
++G G++A+E F EM K G P + T +LSAC+H+G+V EG +FD MR + I+
Sbjct: 293 LAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIK 352
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAK 346
P + HYGC+VDLL RA L+ + LIK + +K C H D ELGE V
Sbjct: 353 PNLHHYGCVVDLLGRARLLDKAYSLIKSMEMK-PDSTIWRTLLGACRVHGDVELGERVIS 411
Query: 347 RLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYF 406
LIEL+ + G Y++L NTY+ G+W+ V +R +++EK + + S + L+ ++
Sbjct: 412 HLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFI 471
Query: 407 VKNYSVHRKRIMYSMLSELGAHIKLS 432
V + S RK +Y ML+E+ +K++
Sbjct: 472 VDDVSHPRKEEIYKMLAEINQQLKIA 497
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 124/263 (47%), Gaps = 20/263 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNW--- 57
+YS +DA +FD D VS+N + +++N T LFD+M DV
Sbjct: 157 LYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMK-NDVDGCVKP 215
Query: 58 ---NCMIA--GYVAVGDLEAANELFERMPDRDVVSW----NCMIDGCVRVGNVPLALEFF 108
C++A +G L+ ++ + + + + N ++ R G++ A + F
Sbjct: 216 DGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVF 275
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
M RNVVSW ++++ E ++ F+EM++ G + P E TL +L+AC+H G +
Sbjct: 276 YGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGIS-PEEQTLTGLLSACSHSGLV 334
Query: 169 SVGMWVHSFIKSNNIKVDVLLS--TCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMI 225
+ GM ++S K+ L C++ + + +D A + M ++ + W +++
Sbjct: 335 AEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLL 394
Query: 226 MGYGLHGN---GEKALELFLEME 245
+HG+ GE+ + +E++
Sbjct: 395 GACRVHGDVELGERVISHLIELK 417
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
N+M+ +++ E ++F + + N + L C G L G+ +H I
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
S+ D LL T L+ +Y C A VFDE+P R+ VSWN + Y + L
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLV 200
Query: 240 LFLEMEKK---GPKPNDATFVCVLSACTHAGMVMEGWWYFDLM 279
LF +M+ KP+ T + L AC + G + G D +
Sbjct: 201 LFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFI 243
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 241 bits (614), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 208/387 (53%), Gaps = 37/387 (9%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
N+MID +VK ARK+FDEMP RDV +W +IA Y VG++E A ELFE +P +D+V
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
+W M+ G + ALE+F+RM +RA
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSG-----------IRA----------------- 279
Query: 147 EAVPNEATLVSVLTACAHLGKLSVG-MWVHSFIKSNNIKVD-VLLSTCLLTMYVKCGAMD 204
+E T+ ++ACA LG V KS D V++ + L+ MY KCG ++
Sbjct: 280 ----DEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVE 335
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP-KPNDATFVCVLSAC 263
A +VF M +NV +++SMI+G HG ++AL LF M + KPN TFV L AC
Sbjct: 336 EAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMAC 395
Query: 264 THAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXX 323
+H+G+V +G FD M + + ++P +HY C+VDLL R G ++ + ELIK +SV+
Sbjct: 396 SHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVE-PHGG 454
Query: 324 XXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIR 383
C H + E+ EI A+ L ELEP IG YI+LSN YA+ G W V RVR +I+
Sbjct: 455 VWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIK 514
Query: 384 EKGLQKEAASS-VVHLEDFESKYFVKN 409
EKGL+K A S VV K+F N
Sbjct: 515 EKGLKKTPAVSWVVDKNGQMHKFFPGN 541
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 121/294 (41%), Gaps = 52/294 (17%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY + AR +FD D++S+ +I + + G A +LF+ +P +D+ W M
Sbjct: 193 MYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAM 252
Query: 61 IAGYVAVGDLEAANELFERM---------------------------------------- 80
+ G+ + A E F+RM
Sbjct: 253 VTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGY 312
Query: 81 -PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM---LALHVRAKSFWECL 136
P VV + +ID + GNV A+ F M +NV +++SM LA H RA+ E L
Sbjct: 313 SPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQ---EAL 369
Query: 137 KMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVH-SFIKSNNIKVDVLLSTCLLT 195
+F M+ E PN T V L AC+H G + G V S ++ ++ TC++
Sbjct: 370 HLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVD 429
Query: 196 MYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALELFLEME 245
+ + G + A ++ M V + W +++ +H N E A E E+E
Sbjct: 430 LLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELE 483
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 198/363 (54%), Gaps = 4/363 (1%)
Query: 66 AVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLAL 125
+V + A +LF+ M +R+VVSW M+ G R G++ A+ F MP R+V SWN++LA
Sbjct: 174 SVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAA 233
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV 185
+ F E + +F M+ PNE T+V VL+ACA G L + +H+F ++
Sbjct: 234 CTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSS 293
Query: 186 DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEME 245
DV +S L+ +Y KCG ++ A VF +++ +WNSMI + LHG E+A+ +F EM
Sbjct: 294 DVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMM 353
Query: 246 K---KGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARA 302
K KP+ TF+ +L+ACTH G+V +G YFDLM + IEP++EHYGC++DLL RA
Sbjct: 354 KLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRA 413
Query: 303 GLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIML 362
G + E++ + +K C H +L E+ K L+ L P + G M+
Sbjct: 414 GRFDEALEVMSTMKMK-ADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMM 472
Query: 363 SNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSML 422
+N Y G W++ R R MI+ + K S + +++ +++ + S +Y +L
Sbjct: 473 ANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMIL 532
Query: 423 SEL 425
L
Sbjct: 533 DSL 535
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 138/309 (44%), Gaps = 58/309 (18%)
Query: 3 SVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIA 62
S ++ AR LFD ++VS+ +M+ G+ ++G+ A LF++MP RDV +WN ++A
Sbjct: 173 SSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILA 232
Query: 63 GYVAVGDLEAANELFERMPDRDVVSWN-----CMIDGCVRVGNVPLA------------- 104
G A LF RM + + N C++ C + G + LA
Sbjct: 233 ACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLS 292
Query: 105 ------------------LE----FFNRMPARNVVSWNSML---ALHVRAKSFWECLKMF 139
LE F +++ +WNSM+ ALH R++ E + +F
Sbjct: 293 SDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSE---EAIAVF 349
Query: 140 DEMME--SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTM 196
+EMM+ + P+ T + +L AC H G +S G + + I+ + CL+ +
Sbjct: 350 EEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDL 409
Query: 197 YVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALELFLEMEKKGPKPN 252
+ G D A +V M ++ + W S++ +HG+ E A++ + + PN
Sbjct: 410 LGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVAL-----NPN 464
Query: 253 DATFVCVLS 261
+ +V +++
Sbjct: 465 NGGYVAMMA 473
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/351 (36%), Positives = 194/351 (55%), Gaps = 35/351 (9%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
D + ++ Y GD+E A ++F+RMP++ +V+WN ++ G + G
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLAD---------- 190
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
E +++F +M ESG P+ AT VS+L+ACA G +S+G
Sbjct: 191 ---------------------EAIQVFYQMRESGFE-PDSATFVSLLSACAQTGAVSLGS 228
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
WVH +I S + ++V L T L+ +Y +CG + AR+VFD+M NV +W +MI YG HG
Sbjct: 229 WVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHG 288
Query: 233 NGEKALELFLEMEKK-GPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
G++A+ELF +ME GP PN+ TFV VLSAC HAG+V EG + M + Y + P VEH
Sbjct: 289 YGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEH 348
Query: 292 YGCIVDLLARAGLVKNSEELIKYVSV--KXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
+ C+VD+L RAG + + + I + K C H + +LG +AKRLI
Sbjct: 349 HVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLI 408
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
LEP + G ++MLSN YA G+ D+V +R + L+K+ SV+ +E+
Sbjct: 409 ALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVEN 459
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 110/206 (53%), Gaps = 2/206 (0%)
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F +P + +NS++ + + C+ + M+ S + P+ T SV+ +CA L
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVS-PSNYTFTSVIKSCADLS 121
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
L +G VH + +D + L+T Y KCG M+ AR VFD MP +++V+WNS++
Sbjct: 122 ALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVS 181
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
G+ +G ++A+++F +M + G +P+ ATFV +LSAC G V G W + ++
Sbjct: 182 GFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIIS-EGLD 240
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELI 312
V+ +++L +R G V + E+
Sbjct: 241 LNVKLGTALINLYSRCGDVGKAREVF 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 119/280 (42%), Gaps = 47/280 (16%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
S LD +++ + K G+ AR++FD MP + + WN +++G+ G + A ++
Sbjct: 136 SGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQV 195
Query: 77 FERMPDR----DVVSWNCMIDGCVRVGNVPL----------------------------- 103
F +M + D ++ ++ C + G V L
Sbjct: 196 FYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSR 255
Query: 104 ------ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
A E F++M NV +W +M++ + + +++F++M + +PN T V+
Sbjct: 256 CGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVA 315
Query: 158 VLTACAHLGKLSVGMWVHS-FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
VL+ACAH G + G V+ KS + V C++ M + G +D A ++
Sbjct: 316 VLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDAT 375
Query: 217 NVVS----WNSMIMGYGLHGNGEKALEL---FLEMEKKGP 249
+ W +M+ +H N + +E+ + +E P
Sbjct: 376 GKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNP 415
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 199/348 (57%), Gaps = 5/348 (1%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
D++ N +I Y + +++A +LF+ P RDVV++N +IDG V+ + A E F+ MP
Sbjct: 151 DLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMP 210
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R++VSWNS+++ + + E +K+FDEM+ G P+ +VS L+ACA G G
Sbjct: 211 LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK-PDNVAIVSTLSACAQSGDWQKGK 269
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H + K + +D L+T L+ Y KCG +D A ++F+ + + +WN+MI G +HG
Sbjct: 270 AIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHG 329
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
NGE ++ F +M G KP+ TF+ VL C+H+G+V E FD MR +Y++ +++HY
Sbjct: 330 NGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHY 389
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXX---XXXXCTTHMDSELGEIVAKRLI 349
GC+ DLL RAGL++ + E+I+ + C H + E+ E A R+
Sbjct: 390 GCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVK 449
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMI-REKGLQKEAASSVV 396
L P D G Y ++ YA RW++V +VR +I R+K ++K S V
Sbjct: 450 ALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 52/285 (18%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+YS+ + A LFD + D+V+YN +IDG VK E AR+LFD MP+RD+ +WN +
Sbjct: 161 VYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSL 220
Query: 61 IAGYVAVGDLEAANELFERM------PDR------------------------------- 83
I+GY + A +LF+ M PD
Sbjct: 221 ISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRL 280
Query: 84 --DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM---LALHVRAKSFWECLKM 138
D ++D + G + A+E F + + +WN+M LA+H + +
Sbjct: 281 FIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGEL---TVDY 337
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS-NNIKVDVLLSTCLLTMY 197
F +M+ SG P+ T +SVL C+H G + + ++S ++ ++ C+ +
Sbjct: 338 FRKMVSSG-IKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLL 396
Query: 198 VKCGAMDLARDVFDEMPV-----RNVVSWNSMIMGYGLHGNGEKA 237
+ G ++ A ++ ++MP +++W+ ++ G +HGN E A
Sbjct: 397 GRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIA 441
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/420 (32%), Positives = 235/420 (55%), Gaps = 12/420 (2%)
Query: 21 LDLVSYNSMIDGHVKNGETGAARKLFDEMPVR-----DVWNWNCMIAGYVAVGDLEAANE 75
+++ +N++I G+ + G + +A L+ EM V D + +I + D+
Sbjct: 83 INVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGET 142
Query: 76 LFERMPDRDVVS----WNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKS 131
+ + S N ++ G+V A + F++MP +++V+WNS++
Sbjct: 143 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202
Query: 132 FWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLST 191
E L ++ EM G P+ T+VS+L+ACA +G L++G VH ++ + ++ S
Sbjct: 203 PEEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN 261
Query: 192 CLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEK-KGPK 250
LL +Y +CG ++ A+ +FDEM +N VSW S+I+G ++G G++A+ELF ME +G
Sbjct: 262 VLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLL 321
Query: 251 PNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEE 310
P + TFV +L AC+H GMV EG+ YF MR Y IEP++EH+GC+VDLLARAG VK + E
Sbjct: 322 PCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE 381
Query: 311 LIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQG 370
IK + ++ CT H DS+L E ++++LEP G Y++LSN YA++
Sbjct: 382 YIKSMPMQ-PNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQ 440
Query: 371 RWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
RW DV+++R + G++K S+V + + ++ + + S + +Y+ L E+ ++
Sbjct: 441 RWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLR 500
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 12/271 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+Y+ G V+ A +FD DLV++NS+I+G +NG+ A L+ EM + D +
Sbjct: 165 LYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 224
Query: 57 WNCMIAGYVAVGDLEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+++ +G L + M R++ S N ++D R G V A F+ M
Sbjct: 225 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 284
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+N VSW S++ E +++F M + +P E T V +L AC+H G + G
Sbjct: 285 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 344
Query: 173 -WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGL 230
+ + I+ + C++ + + G + A + MP++ NVV W +++ +
Sbjct: 345 EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV 404
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
HG+ + L F ++ +PN + +LS
Sbjct: 405 HGDSD--LAEFARIQILQLEPNHSGDYVLLS 433
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 147/433 (33%), Positives = 224/433 (51%), Gaps = 43/433 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPV-RDVWNWNC 59
MY G V AR +FD ++ ++N+MI G++ NG+ A LF+E+ V R+ W
Sbjct: 90 MYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIE 149
Query: 60 MIAGYVAVGDLEAANELFERMP---------------------------------DRDVV 86
MI GY ++E A ELFERMP +++
Sbjct: 150 MIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAF 209
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
W+ M+ G R+G+V A F R+ AR++V WN+++A + + + + F M G
Sbjct: 210 VWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEG 269
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
P+ T+ S+L+ACA G+L VG VHS I I+++ +S L+ MY KCG ++ A
Sbjct: 270 YE-PDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENA 328
Query: 207 RDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHA 266
VF+ + VR+V NSMI +HG G++ALE+F ME KP++ TF+ VL+AC H
Sbjct: 329 TSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHG 388
Query: 267 GMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXX 326
G +MEG F M + +++P V+H+GC++ LL R+G +K + L+K + VK
Sbjct: 389 GFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVK-PNDTVLG 446
Query: 327 XXXXXCTTHMDSELGEIVAKRLIELEPMDIGPY-----IMLSNTYAAQGRWDDVERVRVM 381
C HMD+E+ E V K +IE Y +SN YA RW E +RV
Sbjct: 447 ALLGACKVHMDTEMAEQVMK-IIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVE 505
Query: 382 IREKGLQKEAASS 394
+ ++GL+K S
Sbjct: 506 MEKRGLEKSPGLS 518
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
++++ H+ S + L ++ + G P L+ AC + ++ +G +HS
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACV-VPRVVLGKLLHSESI 73
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
+ DV++ + L++MY KCG + AR VFDEMP RNV +WN+MI GY +G+ A
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 240 LFLEM 244
LF E+
Sbjct: 134 LFEEI 138
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 135/425 (31%), Positives = 229/425 (53%), Gaps = 12/425 (2%)
Query: 15 FDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDL 70
D T D +N+MI G+V A ++EM R D + + C++ + +
Sbjct: 92 IDDPCTFD---FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSI 148
Query: 71 EAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALH 126
++ F+ + DV N +I+ R G + L+ F ++ ++ SW+SM++
Sbjct: 149 REGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSAR 208
Query: 127 VRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVD 186
+ ECL +F M E+ +VS L ACA+ G L++GM +H F+ N +++
Sbjct: 209 AGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELN 268
Query: 187 VLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEK 246
+++ T L+ MYVKCG +D A +F +M RN +++++MI G LHG GE AL +F +M K
Sbjct: 269 IIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIK 328
Query: 247 KGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVK 306
+G +P+ +V VL+AC+H+G+V EG F M + +EP EHYGC+VDLL RAGL++
Sbjct: 329 EGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLE 388
Query: 307 NSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTY 366
+ E I+ + ++ C + ELG+I A+ L++L + G Y+++SN Y
Sbjct: 389 EALETIQSIPIE-KNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLY 447
Query: 367 AAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELG 426
+ WDDV R R I KGL++ S+V L+ ++ ++ S + + +Y ML ++
Sbjct: 448 SQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQME 507
Query: 427 AHIKL 431
+K
Sbjct: 508 WQLKF 512
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 238 bits (606), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 240/435 (55%), Gaps = 11/435 (2%)
Query: 3 SVFGRVSDARLLFD-SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
SV+ R+ + R+ D + L S+++ + H+ G+ A+ L + +D + ++
Sbjct: 48 SVYLRMRNHRVSPDFHTFPFLLPSFHNPL--HLPLGQRTHAQILLFGLD-KDPFVRTSLL 104
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
Y + GDL +A +F+ +D+ +WN +++ + G + A + F+ MP RNV+SW+
Sbjct: 105 NMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSC 164
Query: 122 MLALHVRAKSFWECLKMFDEMM--ESGEAV--PNEATLVSVLTACAHLGKLSVGMWVHSF 177
++ +V + E L +F EM + EA PNE T+ +VL+AC LG L G WVH++
Sbjct: 165 LINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAY 224
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM-PVRNVVSWNSMIMGYGLHGNGEK 236
I ++++D++L T L+ MY KCG+++ A+ VF+ + ++V ++++MI ++G ++
Sbjct: 225 IDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDE 284
Query: 237 ALELFLEMEKK-GPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
+LF EM PN TFV +L AC H G++ EG YF +M + I P ++HYGC+
Sbjct: 285 CFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCM 344
Query: 296 VDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMD 355
VDL R+GL+K +E I + ++ D + E KRLIEL+PM+
Sbjct: 345 VDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGS-RMLGDIKTCEGALKRLIELDPMN 403
Query: 356 IGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRK 415
G Y++LSN YA GRW +V+ +R + KG+ K S V +E ++ V + S
Sbjct: 404 SGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQES 463
Query: 416 RIMYSMLSELGAHIK 430
+Y+ML E+ ++
Sbjct: 464 ERIYAMLDEIMQRLR 478
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 143/321 (44%), Gaps = 54/321 (16%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MYS G + A+ +FD S + DL ++NS+++ + K G ARKLFDEMP R+V +W+C+
Sbjct: 106 MYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCL 165
Query: 61 IAGYVAVGDLEAANELFERM----PDR--------------------------------- 83
I GYV G + A +LF M P+
Sbjct: 166 INGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYI 225
Query: 84 -------DVVSWNCMIDGCVRVGNVPLALEFFNRMPA-RNVVSWNSMLALHVRAKSFWEC 135
D+V +ID + G++ A FN + + ++V ++++M+ EC
Sbjct: 226 DKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDEC 285
Query: 136 LKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM-WVHSFIKSNNIKVDVLLSTCLL 194
++F EM S PN T V +L AC H G ++ G + I+ I + C++
Sbjct: 286 FQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMV 345
Query: 195 TMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALELFLEMEKKGPK 250
+Y + G + A MP+ +V+ W S++ G + G+ E AL+ +E++
Sbjct: 346 DLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPM--- 402
Query: 251 PNDATFVCVLSACTHAGMVME 271
N +V + + G ME
Sbjct: 403 -NSGAYVLLSNVYAKTGRWME 422
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 144/427 (33%), Positives = 224/427 (52%), Gaps = 50/427 (11%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
L S + L S++D +VK G+ AR++F+E D+ W MI GY G + A
Sbjct: 268 LVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA 327
Query: 74 NELFERMPDRDV----VSWNCMIDGC----------------VRVG----NVPLAL---- 105
LF++M ++ V+ ++ GC ++VG NV AL
Sbjct: 328 LSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMY 387
Query: 106 ----------EFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATL 155
F +++V+WNS+++ + S E L +F M S PN T+
Sbjct: 388 AKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTPNGVTV 446
Query: 156 VSVLTACAHLGKLSVGMWVHS------FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV 209
S+ +ACA LG L+VG +H+ F+ S+++ V T LL Y KCG AR +
Sbjct: 447 ASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHV----GTALLDFYAKCGDPQSARLI 502
Query: 210 FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
FD + +N ++W++MI GYG G+ +LELF EM KK KPN++TF +LSAC H GMV
Sbjct: 503 FDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMV 562
Query: 270 MEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXX 329
EG YF M + YN P +HY C+VD+LARAG ++ + ++I+ + ++
Sbjct: 563 NEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQ-PDVRCFGAFL 621
Query: 330 XXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQK 389
C H +LGEIV K++++L P D Y+++SN YA+ GRW+ + VR +++++GL K
Sbjct: 622 HGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSK 681
Query: 390 EAASSVV 396
A S +
Sbjct: 682 IAGHSTM 688
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 146/296 (49%), Gaps = 15/296 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+Y FG DARL+FD D + M+ + N E+ KL+D + D
Sbjct: 85 LYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIV 144
Query: 57 WNCMIAGYVAVGDLEAANEL---FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
++ + + DL+ ++ ++P D V ++D + G + A + FN +
Sbjct: 145 FSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITL 204
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
RNVV W SM+A +V+ E L +F+ M E+ + NE T +++ AC L L G W
Sbjct: 205 RNVVCWTSMIAGYVKNDLCEEGLVLFNRMREN-NVLGNEYTYGTLIMACTKLSALHQGKW 263
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
H + + I++ L T LL MYVKCG + AR VF+E ++V W +MI+GY +G+
Sbjct: 264 FHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGS 323
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKV 289
+AL LF +M+ KPN T VLS C G++ +L R V+ + KV
Sbjct: 324 VNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIEN----LELGRSVHGLSIKV 372
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 198/335 (59%), Gaps = 4/335 (1%)
Query: 64 YVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML 123
Y + G + A ++F+ M +R+VV WN MI G G+V L F +M R++VSWNSM+
Sbjct: 147 YTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMI 206
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNI 183
+ + E L++F EM++ G P+EAT+V+VL A LG L G W+HS +S+ +
Sbjct: 207 SSLSKCGRDREALELFCEMIDQGFD-PDEATVVTVLPISASLGVLDTGKWIHSTAESSGL 265
Query: 184 KVD-VLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
D + + L+ Y K G ++ A +F +M RNVVSWN++I G ++G GE ++LF
Sbjct: 266 FKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFD 325
Query: 243 EMEKKGP-KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLAR 301
M ++G PN+ATF+ VL+ C++ G V G F LM + +E + EHYG +VDL++R
Sbjct: 326 AMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSR 385
Query: 302 AGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIM 361
+G + + + +K + V C +H D +L E+ A L+++EP + G Y++
Sbjct: 386 SGRITEAFKFLKNMPVNANAAMWGSLLSA-CRSHGDVKLAEVAAMELVKIEPGNSGNYVL 444
Query: 362 LSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
LSN YA +GRW DVE+VR ++++ L+K S +
Sbjct: 445 LSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 124/299 (41%), Gaps = 43/299 (14%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y+ GR+ DA+ +FD ++V +N MI G +G+ LF +M R + +WN M
Sbjct: 146 LYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSM 205
Query: 61 IAGYVAVGDLEAANELFERMPDR----------------------DVVSW---------- 88
I+ G A ELF M D+ D W
Sbjct: 206 ISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGL 265
Query: 89 --------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
N ++D + G++ A F +M RNVVSWN++++ + +FD
Sbjct: 266 FKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFD 325
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMYVK 199
M+E G+ PNEAT + VL C++ G++ G + + ++ ++ + +
Sbjct: 326 AMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSR 385
Query: 200 CGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
G + A MPV N W S++ HG+ + A +E+ K P N +V
Sbjct: 386 SGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEP-GNSGNYV 443
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 90/221 (40%), Gaps = 44/221 (19%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
I C + N A F+ + NV+ +N+M+ + E L F M G
Sbjct: 42 FISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRG-IWA 100
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHS------FIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
+E T +L +C+ L L G VH F + I++ V+ +Y G M
Sbjct: 101 DEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVV------ELYTSGGRMG 154
Query: 205 LARDVFDEMPVRNVVSWNSMIMGY--------GLH-----------------------GN 233
A+ VFDEM RNVV WN MI G+ GLH G
Sbjct: 155 DAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGR 214
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
+ALELF EM +G P++AT V VL G++ G W
Sbjct: 215 DREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKW 255
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 135/420 (32%), Positives = 215/420 (51%), Gaps = 41/420 (9%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
+ + L+ N +ID + K G+ AR +F+ M +D +WN +I+GY+ GDL A
Sbjct: 333 MLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEA 392
Query: 74 NELFE----------------------RMPDR-----------------DVVSWNCMIDG 94
+LF+ R+ D D+ N +ID
Sbjct: 393 MKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDM 452
Query: 95 CVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT 154
+ G V +L+ F+ M + V+WN++++ VR F L++ +M +S E VP+ AT
Sbjct: 453 YAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKS-EVVPDMAT 511
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
+ L CA L +G +H + + ++ + L+ MY KCG ++ + VF+ M
Sbjct: 512 FLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS 571
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
R+VV+W MI YG++G GEKALE F +MEK G P+ F+ ++ AC+H+G+V EG
Sbjct: 572 RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLA 631
Query: 275 YFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTT 334
F+ M+ Y I+P +EHY C+VDLL+R+ + +EE I+ + +K C T
Sbjct: 632 CFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIK-PDASIWASVLRACRT 690
Query: 335 HMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
D E E V++R+IEL P D G I+ SN YAA +WD V +R +++K + K S
Sbjct: 691 SGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYS 750
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 156/323 (48%), Gaps = 9/323 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR---DVWNW 57
MY F R +DAR +FD D VSYN+MI G++K + ++F E + D+
Sbjct: 251 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTV 310
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVV----SWNCMIDGCVRVGNVPLALEFFNRMPA 113
+ ++ + DL A ++ M V N +ID + G++ A + FN M
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
++ VSWNS+++ ++++ E +K+F +MM E + T + +++ L L G
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLF-KMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
+HS + I +D+ +S L+ MY KCG + + +F M + V+WN++I G+
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 489
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYG 293
L++ +M K P+ ATF+ L C G + R + E +++
Sbjct: 490 FATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGN 548
Query: 294 CIVDLLARAGLVKNSEELIKYVS 316
++++ ++ G ++NS + + +S
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMS 571
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 97/170 (57%), Gaps = 2/170 (1%)
Query: 104 ALEFFNRM-PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
+L F R+ PA+NV WNS++ + F E L+ + ++ ES + P++ T SV+ AC
Sbjct: 58 SLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRES-KVSPDKYTFPSVIKAC 116
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
A L +G V+ I + D+ + L+ MY + G + AR VFDEMPVR++VSWN
Sbjct: 117 AGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWN 176
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
S+I GY HG E+ALE++ E++ P+ T VL A + +V +G
Sbjct: 177 SLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 159/310 (51%), Gaps = 22/310 (7%)
Query: 3 SVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWN 58
SVF RVS A+ ++ +NS+I KNG A + + ++ D + +
Sbjct: 60 SVFRRVSPAK---------NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFP 110
Query: 59 CMIAGYVAVGDLEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR 114
+I + D E + ++E++ D D+ N ++D R+G + A + F+ MP R
Sbjct: 111 SVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR 170
Query: 115 NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV 174
++VSWNS+++ + + E L+++ E+ S VP+ T+ SVL A +L + G +
Sbjct: 171 DLVSWNSLISGYSSHGYYEEALEIYHELKNSW-IVPDSFTVSSVLPAFGNLLVVKQGQGL 229
Query: 175 HSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNG 234
H F + + V+++ L+ MY+K AR VFDEM VR+ VS+N+MI GY
Sbjct: 230 HGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMV 289
Query: 235 EKALELFLEMEKKGPKPNDATFVCVLSACTH-AGMVMEGWWYFDLMRRVYNIEPKVEHYG 293
E+++ +FLE + KP+ T VL AC H + + + Y +++ + +E V +
Sbjct: 290 EESVRMFLENLDQF-KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN-- 346
Query: 294 CIVDLLARAG 303
++D+ A+ G
Sbjct: 347 ILIDVYAKCG 356
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 234 bits (598), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 141/421 (33%), Positives = 230/421 (54%), Gaps = 11/421 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MYS +++A +FDSS + +++++M+ G+ +NGE+ A KLF M +
Sbjct: 265 MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYT 324
Query: 61 IAGYV-AVGD---LEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
I G + A D LE +L + +R + + ++D + G + A + F+ +
Sbjct: 325 IVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ 384
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R+V W S+++ +V+ E L ++ M +G +PN+ T+ SVL AC+ L L +G
Sbjct: 385 ERDVALWTSLISGYVQNSDNEEALILYRRMKTAG-IIPNDPTMASVLKACSSLATLELGK 443
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
VH + ++V + + L TMY KCG+++ VF P ++VVSWN+MI G +G
Sbjct: 444 QVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNG 503
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
G++ALELF EM +G +P+D TFV ++SAC+H G V GW+YF++M ++PKV+HY
Sbjct: 504 QGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHY 563
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
C+VDLL+RAG +K ++E I+ ++ C H ELG ++L+ L
Sbjct: 564 ACMVDLLSRAGQLKEAKEFIESANID-HGLCLWRILLSACKNHGKCELGVYAGEKLMALG 622
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSV 412
+ Y+ LS Y A GR DVERV +R G+ KE S + L++ + FV ++
Sbjct: 623 SRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKN-QYHVFVVGDTM 681
Query: 413 H 413
H
Sbjct: 682 H 682
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 165/322 (51%), Gaps = 13/322 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAAR---KLFDEMPVRDVWNW 57
Y+ G+++ A +F++ + D+VS+NS+I G+ +NG ++ +LF EM +D+
Sbjct: 58 FYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPN 117
Query: 58 NCMIAG-YVAVGDLEA------ANELFERMPD-RDVVSWNCMIDGCVRVGNVPLALEFFN 109
+AG + A L++ A+ L +M D+ ++ + G V L+ F
Sbjct: 118 AYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFA 177
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM-ESGEAVPNEATLVSVLTACAHLGKL 168
MP RN +W++M++ + E +K+F+ + E E ++ +VL++ A +
Sbjct: 178 YMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYV 237
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
+G +H N + V LS L+TMY KC +++ A +FD RN ++W++M+ GY
Sbjct: 238 GLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGY 297
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPK 288
+G +A++LF M G KP++ T V VL+AC+ + EG + ++ E
Sbjct: 298 SQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL-GFERH 356
Query: 289 VEHYGCIVDLLARAGLVKNSEE 310
+ +VD+ A+AG + ++ +
Sbjct: 357 LFATTALVDMYAKAGCLADARK 378
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVR---AKSFWECLKMFDEMMES 145
N +++ + G + A FN + ++VVSWNS++ + + S + +++F E M +
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFRE-MRA 111
Query: 146 GEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDL 205
+ +PN TL + A + L +VG H+ + + D+ + T L+ MY K G ++
Sbjct: 112 QDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVED 171
Query: 206 ARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF--LEMEKKGPKPNDATFVCVLSAC 263
VF MP RN +W++M+ GY G E+A+++F EK+ +D F VLS+
Sbjct: 172 GLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSS- 230
Query: 264 THAGMVMEGWWYFDLMRRVYNIEPK 288
+ Y L R+++ I K
Sbjct: 231 ------LAATIYVGLGRQIHCITIK 249
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
E P+ +TL+ LT + L G VH I + + L+ Y KCG + A
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKA 68
Query: 207 RDVFDEMPVRNVVSWNSMIMGYGLHG---NGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
+F+ + ++VVSWNS+I GY +G + ++LF EM + PN T + A
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 264 THAGMVMEGWWYFDLMRRVYNIEPKVEHYG------CIVDLLARAGLVKNSEELIKYV 315
+ G R+ + + K+ +G +V + +AGLV++ ++ Y+
Sbjct: 129 SSLQSSTVG-------RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYM 179
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 234 bits (597), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 136/418 (32%), Positives = 218/418 (52%), Gaps = 8/418 (1%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFE 78
L+ L N ++ + K G AR + DEM RDV +WN ++ GY + A E+
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCR 230
Query: 79 RMPD----RDVVSWNCMIDGC--VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSF 132
M D + ++ NV + F +M +++VSWN M+ ++++
Sbjct: 231 EMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMP 290
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
E ++++ M G P+ ++ SVL AC LS+G +H +I+ + ++LL
Sbjct: 291 VEAVELYSRMEADGFE-PDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 349
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
L+ MY KCG ++ ARDVF+ M R+VVSW +MI YG G G A+ LF +++ G P+
Sbjct: 350 LIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPD 409
Query: 253 DATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
FV L+AC+HAG++ EG F LM Y I P++EH C+VDLL RAG VK + I
Sbjct: 410 SIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFI 469
Query: 313 KYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRW 372
+ +S++ C H D+++G + A +L +L P G Y++LSN YA GRW
Sbjct: 470 QDMSME-PNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRW 528
Query: 373 DDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
++V +R +++ KGL+K +S V + + V + S + +Y L L +K
Sbjct: 529 EEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMK 586
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
+V A + F+ +P RNV+ N M+ +V + E +K+F M P+ T VL
Sbjct: 89 DVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC-GCNVRPDHYTFPCVL 147
Query: 160 TACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVV 219
AC+ G + +G +H + + + L++MY KCG + AR V DEM R+VV
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV 207
Query: 220 SWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHA 266
SWNS+++GY + + ALE+ EME + T +L A ++
Sbjct: 208 SWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY---GL 230
VHS I +++ + L L+ Y + AR VFDE+P RNV+ N MI Y G
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+G G K +F M +P+ TF CVL AC+ +G ++ G
Sbjct: 121 YGEGVK---VFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG 159
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 223/442 (50%), Gaps = 43/442 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLF----------DEMP 50
Y G A +F D+ S+N MI G+ K G + A KL+ DE
Sbjct: 175 FYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYT 234
Query: 51 V----------------RDVWNW---------------NCMIAGYVAVGDLEAANELFER 79
V + V W N ++ Y + A F+
Sbjct: 235 VLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDA 294
Query: 80 MPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLK-M 138
M +D+ SWN M+ G VR+G++ A F++MP R++VSWNS+L + + ++ +
Sbjct: 295 MKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVREL 354
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
F EM + P+ T+VS+++ A+ G+LS G WVH + +K D LS+ L+ MY
Sbjct: 355 FYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYC 414
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
KCG ++ A VF ++V W SMI G HGNG++AL+LF M+++G PN+ T +
Sbjct: 415 KCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLA 474
Query: 259 VLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
VL+AC+H+G+V EG F+ M+ + +P+ EHYG +VDLL RAG V+ ++++++
Sbjct: 475 VLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPM 534
Query: 319 XXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERV 378
C D E E+ L++LEP G Y++LSN YA GRW ++
Sbjct: 535 RPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKT 594
Query: 379 RVMIREKGLQKEAA-SSVVHLE 399
R + +G++K A SSVV +E
Sbjct: 595 REAMENRGVKKTAGYSSVVGVE 616
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 125/266 (46%), Gaps = 37/266 (13%)
Query: 88 WNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGE 147
WN ++ + +GN +A + F RMP +V S+N M+ + + E LK++ +M+ G
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDG- 227
Query: 148 AVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN--IKVDVLLSTCLLTMYVKCGAMDL 205
P+E T++S+L C HL + +G VH +I+ +++LS LL MY KC L
Sbjct: 228 IEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGL 287
Query: 206 ARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK------------------ 247
A+ FD M +++ SWN+M++G+ G+ E A +F +M K+
Sbjct: 288 AKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCD 347
Query: 248 ---------------GPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
KP+ T V ++S + G + G W L+ R+ ++
Sbjct: 348 QRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRL-QLKGDAFLS 406
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVK 318
++D+ + G+++ + + K + K
Sbjct: 407 SALIDMYCKCGIIERAFMVFKTATEK 432
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 100 NVPLA-LEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
N+ LA L F N P NV +N+M++ +K+ EC ++ M+ P+ T + +
Sbjct: 83 NLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKN--ECFGLYSSMIRH-RVSPDRQTFLYL 139
Query: 159 LTACAHLGKLSVGMWVH-SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
+ A + L ++ +H I S + + L L+ Y++ G +A VF MP +
Sbjct: 140 MKASSFLSEVK---QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPD 196
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH-----AGMVMEG 272
V S+N MI+GY G +AL+L+ +M G +P++ T + +L C H G + G
Sbjct: 197 VSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHG 256
Query: 273 W 273
W
Sbjct: 257 W 257
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/351 (36%), Positives = 197/351 (56%), Gaps = 14/351 (3%)
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM 143
DV N +I G + LA + F+ MP R++VSWNSM+ VR + L++F EM
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 144 ESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN---NIKVDVLLSTCLLTMYVKC 200
S E P+ T+ SVL+ACA LG LS+G W H+F+ ++ +DVL+ L+ MY KC
Sbjct: 245 RSFE--PDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKC 302
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM--EKKGPKPNDATFVC 258
G++ +A VF M R++ SWN+MI+G+ HG E+A+ F M +++ +PN TFV
Sbjct: 303 GSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVG 362
Query: 259 VLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+L AC H G V +G YFD+M R Y IEP +EHYGCIVDL+ARAG + + +++ + +K
Sbjct: 363 LLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMK 422
Query: 319 XXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMD-------IGPYIMLSNTYAAQGR 371
C EL E +A+ +I + + G Y++LS YA+ R
Sbjct: 423 PDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASR 482
Query: 372 WDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSML 422
W+DV VR ++ E G++KE S + + ++F + S + + +Y L
Sbjct: 483 WNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQL 533
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 117/219 (53%), Gaps = 8/219 (3%)
Query: 100 NVPLALEFFNRMPARNVVSWNSML---ALHVRAKSFWECLKMFDEMMESGEAVPNEATLV 156
+V A F+ + + WN+++ A V K E ++ +M+E GE+ P++ T
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKE--EAFMLYRKMLERGESSPDKHTFP 155
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
VL ACA++ S G VH I + DV ++ L+ +Y CG +DLAR VFDEMP R
Sbjct: 156 FVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPER 215
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF 276
++VSWNSMI G + AL+LF EM++ +P+ T VLSAC G + G W
Sbjct: 216 SLVSWNSMIDALVRFGEYDSALQLFREMQRSF-EPDGYTMQSVLSACAGLGSLSLGTWAH 274
Query: 277 DLMRRVYNIEPKVEHY--GCIVDLLARAGLVKNSEELIK 313
+ R +++ ++ ++++ + G ++ +E++ +
Sbjct: 275 AFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQ 313
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 19/241 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR---DVWNW 57
+Y G + AR +FD LVS+NSMID V+ GE +A +LF EM D +
Sbjct: 195 LYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTM 254
Query: 58 NCMIAGYVAVGDLEA---ANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+++ +G L A+ R D DV+ N +I+ + G++ +A + F
Sbjct: 255 QSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQG 314
Query: 111 MPARNVVSWNSML---ALHVRAKSFWECLKMFDEMMESGEAV-PNEATLVSVLTACAHLG 166
M R++ SWN+M+ A H RA+ E + FD M++ E V PN T V +L AC H G
Sbjct: 315 MQKRDLASWNAMILGFATHGRAE---EAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRG 371
Query: 167 KLSVG-MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSM 224
++ G + ++ I+ + C++ + + G + A D+ MP++ + V W S+
Sbjct: 372 FVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSL 431
Query: 225 I 225
+
Sbjct: 432 L 432
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 16 DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANE 75
D + +D++ NS+I+ + K G A ++F M RD+ +WN MI G+ G E A
Sbjct: 282 DVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMN 341
Query: 76 LFERMPDR------DVVSWNCMIDGCVRVGNVPLALEFFNRM-------PARNVVSWNSM 122
F+RM D+ + V++ ++ C G V ++F+ M PA + + +
Sbjct: 342 FFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPA--LEHYGCI 399
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
+ L RA E + +M+ S P+ S+L AC G
Sbjct: 400 VDLIARAGYITEAI----DMVMSMPMKPDAVIWRSLLDACCKKG 439
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/341 (34%), Positives = 202/341 (59%), Gaps = 1/341 (0%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
N +I Y+ + A +F+RM ++ VV+WN ++ G V G V A E F MP +N+V
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
SWN++++ V+ F E +++F M + T++S+ +AC HLG L + W++ +
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
I+ N I++DV L T L+ M+ +CG + A +F+ + R+V +W + I + GN E+A
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVD 297
+ELF +M ++G KP+ FV L+AC+H G+V +G F M +++ + P+ HYGC+VD
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 298 LLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIG 357
LL RAGL++ + +LI+ + ++ C + E+ A+++ L P G
Sbjct: 616 LLGRAGLLEEAVQLIEDMPME-PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 358 PYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHL 398
Y++LSN YA+ GRW+D+ +VR+ ++EKGL+K +S + +
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQI 715
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 126/248 (50%), Gaps = 8/248 (3%)
Query: 26 YNSMIDGHVKNGETGAARKLFDEM------PVRDVWNWN-CMIAGYVAVGDLEAANELFE 78
YNS+I G+ +G A LF M P + + + A A G+ + L
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 79 RMP-DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLK 137
+M +D+ N ++ G + A + F+ M RNVVSW SM+ + R + +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMY 197
+F M+ E PN T+V V++ACA L L G V++FI+++ I+V+ L+ + L+ MY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 198 VKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
+KC A+D+A+ +FDE N+ N+M Y G +AL +F M G +P+ + +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 258 CVLSACTH 265
+S+C+
Sbjct: 342 SAISSCSQ 349
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 155/355 (43%), Gaps = 76/355 (21%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
DL NS++ + + GE +ARK+FDEM R+V +W MI GY + A +LF RM
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 82 DRDVVSWN-----CMIDGCVRVGN-----------------------------------V 101
+ V+ N C+I C ++ + +
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 102 PLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
+A F+ A N+ N+M + +VR E L +F+ MM+SG P+ +++S +++
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG-VRPDRISMLSAISS 346
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
C+ L + G H ++ N + + L+ MY+KC D A +FD M + VV+W
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 222 NSMIMGYGLHGN-------------------------------GEKALELFLEME-KKGP 249
NS++ GY +G E+A+E+F M+ ++G
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 250 KPNDATFVCVLSACTHAGMV-MEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
+ T + + SAC H G + + W Y+ + + I+ V +VD+ +R G
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIEKN--GIQLDVRLGTTLVDMFSRCG 519
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY R A +FD +V++NS++ G+V+NGE AA + F+ MP +++ +WN +
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 61 IAGYVAVGDLEAANELFERMPDR-----------------------DVVSW--------- 88
I+G V E A E+F M + D+ W
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 89 --------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
++D R G+ A+ FN + R+V +W + + A + +++FD
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV-HSFIKSNNIKVDVLLSTCLLTMYVK 199
+M+E G P+ V LTAC+H G + G + +S +K + + + + C++ + +
Sbjct: 561 DMIEQG-LKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 200 CGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKA 237
G ++ A + ++MP+ N V WNS++ + GN E A
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/333 (36%), Positives = 202/333 (60%), Gaps = 3/333 (0%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
G+V A + F++MP +++V+WNS++ E L ++ EM G P+ T+VS+
Sbjct: 37 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG-IKPDGFTIVSL 95
Query: 159 LTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
L+ACA +G L++G VH ++ + ++ S LL +Y +CG ++ A+ +FDEM +N
Sbjct: 96 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 155
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEK-KGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
VSW S+I+G ++G G++A+ELF ME +G P + TFV +L AC+H GMV EG+ YF
Sbjct: 156 VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR 215
Query: 278 LMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMD 337
MR Y IEP++EH+GC+VDLLARAG VK + E IK + ++ CT H D
Sbjct: 216 RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ-PNVVIWRTLLGACTVHGD 274
Query: 338 SELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVH 397
S+L E ++++LEP G Y++LSN YA++ RW DV+++R + G++K S+V
Sbjct: 275 SDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVE 334
Query: 398 LEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
+ + ++ + + S + +Y+ L E+ ++
Sbjct: 335 VGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLR 367
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 12/271 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+Y+ G V+ A +FD DLV++NS+I+G +NG+ A L+ EM + D +
Sbjct: 32 LYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 91
Query: 57 WNCMIAGYVAVGDLEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+++ +G L + M R++ S N ++D R G V A F+ M
Sbjct: 92 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 151
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+N VSW S++ E +++F M + +P E T V +L AC+H G + G
Sbjct: 152 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 211
Query: 173 -WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGL 230
+ + I+ + C++ + + G + A + MP++ NVV W +++ +
Sbjct: 212 EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV 271
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
HG+ + L F ++ +PN + +LS
Sbjct: 272 HGDSD--LAEFARIQILQLEPNHSGDYVLLS 300
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSM 224
+ + +G +HS + + + + LL +Y CG + A VFD+MP +++V+WNS+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYN 284
I G+ +G E+AL L+ EM KG KP+ T V +LSAC G + G M +V
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-G 119
Query: 285 IEPKVEHYGCIVDLLARAGLVKNSEEL 311
+ + ++DL AR G V+ ++ L
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTL 146
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/341 (34%), Positives = 202/341 (59%), Gaps = 1/341 (0%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
N +I Y+ + A +F+RM ++ VV+WN ++ G V G V A E F MP +N+V
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
SWN++++ V+ F E +++F M + T++S+ +AC HLG L + W++ +
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
I+ N I++DV L T L+ M+ +CG + A +F+ + R+V +W + I + GN E+A
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVD 297
+ELF +M ++G KP+ FV L+AC+H G+V +G F M +++ + P+ HYGC+VD
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 298 LLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIG 357
LL RAGL++ + +LI+ + ++ C + E+ A+++ L P G
Sbjct: 616 LLGRAGLLEEAVQLIEDMPME-PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 358 PYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHL 398
Y++LSN YA+ GRW+D+ +VR+ ++EKGL+K +S + +
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQI 715
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 129/255 (50%), Gaps = 8/255 (3%)
Query: 26 YNSMIDGHVKNGETGAARKLFDEM------PVRDVWNWN-CMIAGYVAVGDLEAANELFE 78
YNS+I G+ +G A LF M P + + + A A G+ + L
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 79 RMP-DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLK 137
+M +D+ N ++ G + A + F+ M RNVVSW SM+ + R + +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMY 197
+F M+ E PN T+V V++ACA L L G V++FI+++ I+V+ L+ + L+ MY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 198 VKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
+KC A+D+A+ +FDE N+ N+M Y G +AL +F M G +P+ + +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 258 CVLSACTHAGMVMEG 272
+S+C+ ++ G
Sbjct: 342 SAISSCSQLRNILWG 356
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 155/355 (43%), Gaps = 76/355 (21%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
DL NS++ + + GE +ARK+FDEM R+V +W MI GY + A +LF RM
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 82 DRDVVSWN-----CMIDGCVRVGN-----------------------------------V 101
+ V+ N C+I C ++ + +
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 102 PLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
+A F+ A N+ N+M + +VR E L +F+ MM+SG P+ +++S +++
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG-VRPDRISMLSAISS 346
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
C+ L + G H ++ N + + L+ MY+KC D A +FD M + VV+W
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 222 NSMIMGYGLHGN-------------------------------GEKALELFLEME-KKGP 249
NS++ GY +G E+A+E+F M+ ++G
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 250 KPNDATFVCVLSACTHAGMV-MEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
+ T + + SAC H G + + W Y+ + + I+ V +VD+ +R G
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIEKN--GIQLDVRLGTTLVDMFSRCG 519
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY R A +FD +V++NS++ G+V+NGE AA + F+ MP +++ +WN +
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 61 IAGYVAVGDLEAANELFERMPDR-----------------------DVVSW--------- 88
I+G V E A E+F M + D+ W
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 89 --------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
++D R G+ A+ FN + R+V +W + + A + +++FD
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV-HSFIKSNNIKVDVLLSTCLLTMYVK 199
+M+E G P+ V LTAC+H G + G + +S +K + + + + C++ + +
Sbjct: 561 DMIEQG-LKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 200 CGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKA 237
G ++ A + ++MP+ N V WNS++ + GN E A
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 138/454 (30%), Positives = 222/454 (48%), Gaps = 50/454 (11%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNW--- 57
MY+ G++ +FD D+VS+N +I +V NG A +F M +
Sbjct: 90 MYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEG 149
Query: 58 ------------------------------------NCMIAGYVAVGDLEAANELFERMP 81
N ++ + G L+ A +F+ M
Sbjct: 150 TIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMR 209
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D++V W M+ G V G + A F R P ++VV W +M+ +V+ F E L++F
Sbjct: 210 DKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRC 269
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M +G P+ LVS+LT CA G L G W+H +I N + VD ++ T L+ MY KCG
Sbjct: 270 MQTAG-IRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCG 328
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
++ A +VF E+ R+ SW S+I G ++G +AL+L+ EME G + + TFV VL+
Sbjct: 329 CIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLT 388
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXX 321
AC H G V EG F M +N++PK EH C++DLL RAGL+ +EELI K
Sbjct: 389 ACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELID----KMRG 444
Query: 322 XXXXXXXXXXCT------THMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDV 375
C+ + + ++ E VA++L ++E D + +L++ YA+ RW+DV
Sbjct: 445 ESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDV 504
Query: 376 ERVRVMIREKGLQKEAASSVVHLEDFESKYFVKN 409
VR +++ G++K S + ++ ++ V +
Sbjct: 505 TNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGD 538
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 118/266 (44%), Gaps = 12/266 (4%)
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
+N ML KSF + L +F E+ G P+ TL VL + L K+ G VH +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQG-LYPDNFTLPVVLKSIGRLRKVIEGEKVHGYA 72
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
++ D +S L+ MY G +++ VFDEMP R+VVSWN +I Y +G E A+
Sbjct: 73 VKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAI 132
Query: 239 ELFLEMEKKGP-KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVD 297
+F M ++ K ++ T V LSAC+ + G + + V E V +VD
Sbjct: 133 GVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFV--VTEFEMSVRIGNALVD 190
Query: 298 LLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPM-DI 356
+ + G + + + + K T +D A+ L E P+ D+
Sbjct: 191 MFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDE------ARVLFERSPVKDV 244
Query: 357 GPYIMLSNTYAAQGRWDD-VERVRVM 381
+ + N Y R+D+ +E R M
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCM 270
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 229/435 (52%), Gaps = 12/435 (2%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGA-ARKLFDEMPVRDVWNWN--CMIA 62
G V D R +FD ++S+ ++I G++KN A LF EM + N +
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 63 GYVAVGDL-------EAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARN 115
+ A G+L + + F+R + N +I V+ + A F + +N
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 116 VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVH 175
+VS+N+ L R +F + K+ E+ E V + T S+L+ A++G + G +H
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGV-SAFTFASLLSGVANVGSIRKGEQIH 497
Query: 176 SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGE 235
S + + + + L++MY KCG++D A VF+ M RNV+SW SMI G+ HG
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
+ LE F +M ++G KPN+ T+V +LSAC+H G+V EGW +F+ M + I+PK+EHY C+
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 296 VDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMD 355
VDLL RAGL+ ++ E I + + C H ++ELG++ A++++EL+P +
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQ-ADVLVWRTFLGACRVHSNTELGKLAARKILELDPNE 676
Query: 356 IGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRK 415
YI LSN YA G+W++ +R ++E+ L KE S + + D K++V + +
Sbjct: 677 PAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNA 736
Query: 416 RIMYSMLSELGAHIK 430
+Y L L IK
Sbjct: 737 HQIYDELDRLITEIK 751
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 16/263 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WN 56
M+ R+ DA+ F+S +LVSYN+ +DG +N A KL E+ R++ +
Sbjct: 417 MFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFT 476
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVS----WNCMIDGCVRVGNVPLALEFFNRMP 112
+ +++G VG + ++ ++ + N +I + G++ A FN M
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
RNV+SW SM+ + L+ F++M+E G PNE T V++L+AC+H+G +S G
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG-VKPNEVTYVAILSACSHVGLVSEG- 594
Query: 173 WVH--SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYG 229
W H S + + IK + C++ + + G + A + + MP + +V+ W + +
Sbjct: 595 WRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACR 654
Query: 230 LHGN---GEKALELFLEMEKKGP 249
+H N G+ A LE++ P
Sbjct: 655 VHSNTELGKLAARKILELDPNEP 677
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 146/309 (47%), Gaps = 55/309 (17%)
Query: 5 FGRVSDARLL-FDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM---PVRDVWNWNCM 60
G++ ARL+ FD + D V YNS+I + K+G++ A +F+ M RDV +W+ M
Sbjct: 80 LGKLVHARLIEFD--IEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAM 137
Query: 61 IAGYVAVGDLEAANELFERMPDRDVV----SWNCMIDGC-----VRVGNVPL-------- 103
+A Y G A ++F + +V + +I C V VG V L
Sbjct: 138 MACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGH 197
Query: 104 ------------------------ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMF 139
A + F++M NVV+W M+ ++ E ++ F
Sbjct: 198 FESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFF 257
Query: 140 DEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVK 199
+M+ SG ++ TL SV +ACA L LS+G +HS+ + + DV S L+ MY K
Sbjct: 258 LDMVLSGFE-SDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAK 314
Query: 200 C---GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN-GEKALELFLEMEKKGP-KPNDA 254
C G++D R VFD M +V+SW ++I GY + N +A+ LF EM +G +PN
Sbjct: 315 CSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHF 374
Query: 255 TFVCVLSAC 263
TF AC
Sbjct: 375 TFSSAFKAC 383
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 7/211 (3%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFF---NRMPAR 114
+C+ A +G L A L E + D V +N +I + G+ A + F R R
Sbjct: 71 SCIRARDFRLGKLVHA-RLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKR 129
Query: 115 NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV 174
+VVSW++M+A + + +K+F E +E G VPN+ +V+ AC++ + VG
Sbjct: 130 DVVSWSAMMACYGNNGRELDAIKVFVEFLELG-LVPNDYCYTAVIRACSNSDFVGVGRVT 188
Query: 175 HSFI-KSNNIKVDVLLSTCLLTMYVKC-GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
F+ K+ + + DV + L+ M+VK + + A VFD+M NVV+W MI G
Sbjct: 189 LGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMG 248
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
+A+ FL+M G + + T V SAC
Sbjct: 249 FPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 30/213 (14%)
Query: 60 MIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
M A A G ++ ++F+RM D V+SW +I G ++ N LA E N
Sbjct: 311 MYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMK--NCNLATEAIN---------- 358
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
+F EM+ G PN T S AC +L VG V
Sbjct: 359 ------------------LFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
+ + ++ +++M+VK M+ A+ F+ + +N+VS+N+ + G + N E+A +
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFK 460
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
L E+ ++ + TF +LS + G + +G
Sbjct: 461 LLSEITERELGVSAFTFASLLSGVANVGSIRKG 493
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 5/187 (2%)
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
+ ++ H+ A + D M G + T S+L +C +G VH+ +
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM---PVRNVVSWNSMIMGYGLHGNGEK 236
+I+ D +L L+++Y K G A DVF+ M R+VVSW++M+ YG +G
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGC-I 295
A+++F+E + G PND + V+ AC+++ V G + + + E V GC +
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV-CVGCSL 208
Query: 296 VDLLARA 302
+D+ +
Sbjct: 209 IDMFVKG 215
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 195/345 (56%), Gaps = 3/345 (0%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
N ++ Y G L+ A +LF +P RD+VSWN +I G VR G+V A + F+ MP +N++
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
SWN M++ ++ A + + +F EM+ +G NE+TLV +L AC +L G VH+
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQ-GNESTLVLLLNACGRSARLKEGRSVHAS 275
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
+ + V++ T L+ MY KC + LAR +FD + +RN V+WN MI+ + LHG E
Sbjct: 276 LIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGG 335
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVD 297
LELF M +P++ TFV VL C AG+V +G Y+ LM + I+P H C+ +
Sbjct: 336 LELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMAN 395
Query: 298 LLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHM--DSELGEIVAKRLIELEPMD 355
L + AG + +EE +K + + ++ + LGE +AK LIE +P++
Sbjct: 396 LYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLN 455
Query: 356 IGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
Y +L N Y+ GRW+DV RVR M++E+ + + +V L++
Sbjct: 456 YKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKE 500
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 123/292 (42%), Gaps = 48/292 (16%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ G + A+ LF D+VS+NS+I G V+NG+ AA KLFDEMP +++ +WN M
Sbjct: 162 MYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIM 221
Query: 61 IAGYVAVGDLEAANELFERMP--------------------------------------- 81
I+ Y+ + + LF M
Sbjct: 222 ISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFL 281
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
+ VV +ID + V LA F+ + RN V+WN M+ H L++F+
Sbjct: 282 NSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEA 341
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF-IKSNNIKVDVLLSTCLLTMYVKC 200
M+ +G P+E T V VL CA G +S G +S + IK + C+ +Y
Sbjct: 342 MI-NGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSA 400
Query: 201 GAMDLARDVFDEMPVRNV----VSWNSMIMGYGLHGN---GEKALELFLEME 245
G + A + +P +V W +++ GN GE + +E +
Sbjct: 401 GFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETD 452
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 32/184 (17%)
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
N + ++ + S + L + +++ G VP+ T VS+++ + G H
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFG-FVPDSYTFVSLISCIEKTCCVDSGKMCHGQAI 145
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG------- 232
+ + + L+ MY CGA+DLA+ +F E+P R++VSWNS+I G +G
Sbjct: 146 KHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHK 205
Query: 233 ------------------------NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGM 268
N ++ LF EM + G + N++T V +L+AC +
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 265
Query: 269 VMEG 272
+ EG
Sbjct: 266 LKEG 269
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 213/438 (48%), Gaps = 47/438 (10%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRD----------------- 84
ARK+ DEMP ++V +W MI+ Y G A +F M D
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIR 165
Query: 85 -------------VVSWN---------CMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
+V WN ++D + G + A E F +P R+VVS ++
Sbjct: 166 ASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAI 225
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
+A + + E L+MF + G + PN T S+LTA + L L G H +
Sbjct: 226 IAGYAQLGLDEEALEMFHRLHSEGMS-PNYVTYASLLTALSGLALLDHGKQAHCHVLRRE 284
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF- 241
+ +L L+ MY KCG + AR +FD MP R +SWN+M++GY HG G + LELF
Sbjct: 285 LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 242 LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD-LMRRVYNIEPKVEHYGCIVDLLA 300
L ++K KP+ T + VLS C+H M G FD ++ Y +P EHYGCIVD+L
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLG 404
Query: 301 RAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYI 360
RAG + + E IK + K C H+ ++GE V +RLIE+EP + G Y+
Sbjct: 405 RAGRIDEAFEFIKRMPSK-PTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYV 463
Query: 361 MLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVH-RKRIMY 419
+LSN YA+ GRW DV VR M+ +K + KE S + E YF N H R+ +
Sbjct: 464 ILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQ-TLHYFHANDRTHPRREEVL 522
Query: 420 SMLSELGAHIKLSPAGSI 437
+ + E+ IK+ AG +
Sbjct: 523 AKMKEIS--IKMKQAGYV 538
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 1/157 (0%)
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
++L AC L G VH+ + L T LL Y KC ++ AR V DEMP +
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF 276
NVVSW +MI Y G+ +AL +F EM + KPN+ TF VL++C A + G
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 277 DLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
L+ + +N + + ++D+ A+AG +K + E+ +
Sbjct: 177 GLIVK-WNYDSHIFVGSSLLDMYAKAGQIKEAREIFE 212
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 105/237 (44%), Gaps = 10/237 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MY+ G++ +AR +F+ D+VS ++I G+ + G A ++F + +
Sbjct: 197 MYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVT 256
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDV----VSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ ++ + L+ + + R++ V N +ID + GN+ A F+ MP
Sbjct: 257 YASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP 316
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R +SWN+ML + + E L++F M + P+ TL++VL+ C+H G+
Sbjct: 317 ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGL 376
Query: 173 WVHSFIKSN--NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
+ + + K C++ M + G +D A + MP + ++G
Sbjct: 377 NIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLG 433
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 139/434 (32%), Positives = 221/434 (50%), Gaps = 42/434 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ G + DAR +FD DL S+N M++G+ + G ARKLFDEM +D ++W M
Sbjct: 129 MYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAM 188
Query: 61 IAGYVAVGDLEAA---NELFERMP------------------------------------ 81
+ GYV E A L +R+P
Sbjct: 189 VTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAG 248
Query: 82 -DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
D D V W+ ++D + G + A F+++ ++VVSW SM+ + ++ + E +F
Sbjct: 249 LDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFS 308
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
E++ S E PNE T VL ACA L +G VH ++ S+ L+ MY KC
Sbjct: 309 ELVGSCER-PNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
G ++ A+ V D P ++VSW S+I G +G ++AL+ F + K G KP+ TFV VL
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVL 427
Query: 261 SACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXX 320
SACTHAG+V +G +F + + + +HY C+VDLLAR+G + + +I + +K
Sbjct: 428 SACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMK-P 486
Query: 321 XXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRV 380
C+T+ + +L E A+ L ++EP + Y+ ++N YAA G+W++ ++R
Sbjct: 487 SKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRK 546
Query: 381 MIREKGLQKEAASS 394
++E G+ K SS
Sbjct: 547 RMQEIGVTKRPGSS 560
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 129/256 (50%), Gaps = 1/256 (0%)
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV 116
WN ++ Y G L A ++F+ MP+RD+ SWN M++G VG + A + F+ M ++
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDS 182
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
SW +M+ +V+ E L ++ M + PN T+ + A A + + G +H
Sbjct: 183 YSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHG 242
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
I + D +L + L+ MY KCG +D AR++FD++ ++VVSW SMI Y +
Sbjct: 243 HIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWRE 302
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIV 296
LF E+ +PN+ TF VL+AC G M RV +P +V
Sbjct: 303 GFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASSSLV 361
Query: 297 DLLARAGLVKNSEELI 312
D+ + G +++++ ++
Sbjct: 362 DMYTKCGNIESAKHVV 377
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Query: 150 PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV 209
P +T +++ C+ L G VH I+++ +++ LL MY KCG++ AR V
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 210 FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
FDEMP R++ SWN M+ GY G E+A +LF EM +K + ++ +++
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK----DSYSWTAMVTGYVKKDQP 198
Query: 270 MEGWWYFDLMRRVYNIEPKV 289
E + LM+RV N P +
Sbjct: 199 EEALVLYSLMQRVPNSRPNI 218
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 212/380 (55%), Gaps = 10/380 (2%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
N ++ Y G + +FE + ++ VVSW ++D V+ + E F+ MP RN V
Sbjct: 150 NALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAV 209
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
+W M+A ++ A E L++ EM+ N TL S+L+ACA G L VG WVH +
Sbjct: 210 AWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVY 269
Query: 178 IKSNNIKV-------DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
+ + DV++ T L+ MY KCG +D + +VF M RNVV+WN++ G +
Sbjct: 270 ALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAM 329
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
HG G +++F +M ++ KP+D TF VLSAC+H+G+V EGW F + R Y +EPKV+
Sbjct: 330 HGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVD 387
Query: 291 HYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIE 350
HY C+VDLL RAGL++ +E L++ + V C+ H E+ E + + LI+
Sbjct: 388 HYACMVDLLGRAGLIEEAEILMREMPVP-PNEVVLGSLLGSCSVHGKVEIAERIKRELIQ 446
Query: 351 LEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNY 410
+ P + I++SN Y A+GR D + +R +R++G++K S +++ D ++ +
Sbjct: 447 MSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDR 506
Query: 411 SVHRKRIMYSMLSELGAHIK 430
S R + +Y L+E+ I+
Sbjct: 507 SHPRTKEIYLKLNEVIERIR 526
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 85/210 (40%), Gaps = 35/210 (16%)
Query: 99 GNVPLALEFFNRMP--ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLV 156
G + A + F+ +P ++ V W ++L+ R +K+F EM + ++ ++V
Sbjct: 57 GEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEI-DDVSVV 115
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG--------------- 201
+ CA L L H + V + L+ MY KCG
Sbjct: 116 CLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEK 175
Query: 202 ----------------AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEME 245
++ R+VF EMP RN V+W M+ GY G + LEL EM
Sbjct: 176 SVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMV 235
Query: 246 -KKGPKPNDATFVCVLSACTHAGMVMEGWW 274
+ G N T +LSAC +G ++ G W
Sbjct: 236 FRCGHGLNFVTLCSMLSACAQSGNLVVGRW 265
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKV--DVLLSTCLLTMYVKCGAMDLARDVFDEMPV 215
+L CAH L G +H+ + ++ +K LS L Y G M A+ +FDE+P+
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 216 --RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
++ V W +++ + +G +++LF+EM +K + +D + VC+ C
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCA 122
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 138/427 (32%), Positives = 222/427 (51%), Gaps = 10/427 (2%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
+ + L D+ ++ID ++K G AR +FD M +++ WN +++G L+ A
Sbjct: 251 ILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDA 310
Query: 74 NELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMP----ARNVVSWNSMLAL 125
L RM D ++WN + G +G AL+ +M A NVVSW ++ +
Sbjct: 311 EALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSG 370
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV 185
+ +F LK+F +M E G PN AT+ ++L L L G VH F N+
Sbjct: 371 CSKNGNFRNALKVFIKMQEEGVG-PNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLIC 429
Query: 186 DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEME 245
D ++T L+ MY K G + A ++F + +++ SWN M+MGY + G GE+ + F M
Sbjct: 430 DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVML 489
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
+ G +P+ TF VLS C ++G+V EGW YFDLMR Y I P +EH C+VDLL R+G +
Sbjct: 490 EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYL 549
Query: 306 KNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNT 365
+ + I+ +S+K C H D EL EI KRL LEP + Y+M+ N
Sbjct: 550 DEAWDFIQTMSLK-PDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINL 608
Query: 366 YAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
Y+ RW+DVER+R ++R ++ + S + ++ ++ + + + +Y L +L
Sbjct: 609 YSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKL 668
Query: 426 GAHIKLS 432
+ +K S
Sbjct: 669 VSEMKKS 675
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 40/249 (16%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP----A 113
N +I Y G LE + ++F M DR++ SWN ++ ++G V A+ + M
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
++V+WNS+L+ + + + + M +G P+ +++ S+L A A G L +G
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLK-PSTSSISSLLQAVAEPGHLKLGKA 246
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI-------- 225
+H +I N + DV + T L+ MY+K G + AR VFD M +N+V+WNS++
Sbjct: 247 IHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACL 306
Query: 226 ---------------------------MGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
GY G EKAL++ +M++KG PN ++
Sbjct: 307 LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366
Query: 259 VLSACTHAG 267
+ S C+ G
Sbjct: 367 IFSGCSKNG 375
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 118/221 (53%), Gaps = 5/221 (2%)
Query: 95 CVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT 154
CV +G A + F+ MP R+ ++WN ++ +++R+ ++ + +++F EM SG A ++T
Sbjct: 36 CVSLG---FANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSG-AKAYDST 91
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
+V +L C++ + G +H ++ ++ +V + L+ MY + G ++L+R VF+ M
Sbjct: 92 MVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK 151
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
RN+ SWNS++ Y G + A+ L EME G KP+ T+ +LS G+ +
Sbjct: 152 DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 275 YFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYV 315
M ++ ++P ++ +A G +K + + Y+
Sbjct: 212 VLKRM-QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYI 251
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 3/225 (1%)
Query: 170 VGMWVHS-FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
+G+ +H IK D + + + Y +C ++ A +FDEMP R+ ++WN ++M
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPK 288
GN EKA+ELF EM+ G K D+T V +L C++ EG + R+ +E
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRL-GLESN 123
Query: 289 VEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRL 348
V ++ + +R G ++ S ++ + + ++D +G + +
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 349 IELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAAS 393
L+P DI + L + YA++G D V ++ GL+ +S
Sbjct: 184 CGLKP-DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSS 227
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 228 bits (580), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 147/484 (30%), Positives = 235/484 (48%), Gaps = 55/484 (11%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MY+ G + +A +F + D+VS+N+M+ G+ + G A +LF++M DV
Sbjct: 273 MYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 57 WNCMIAGYVAVG----DLEAANELFERMPDRDVVSWNCMIDGCVRVG------------- 99
W+ I+GY G L ++ + V+ ++ GC VG
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 100 -----------------------------NVPLALEFFNRMPA--RNVVSWNSMLALHVR 128
V A F+ + R+VV+W M+ + +
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQ 452
Query: 129 AKSFWECLKMFDEMMESG-EAVPNEATLVSVLTACAHLGKLSVGMWVHSF-IKSNNIKVD 186
+ L++ EM E + PN T+ L ACA L L +G +H++ +++ V
Sbjct: 453 HGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP 512
Query: 187 VLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEK 246
+ +S CL+ MY KCG++ AR VFD M +N V+W S++ GYG+HG GE+AL +F EM +
Sbjct: 513 LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRR 572
Query: 247 KGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVK 306
G K + T + VL AC+H+GM+ +G YF+ M+ V+ + P EHY C+VDLL RAG +
Sbjct: 573 IGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLN 632
Query: 307 NSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTY 366
+ LI+ + ++ C H ELGE A+++ EL G Y +LSN Y
Sbjct: 633 AALRLIEEMPME-PPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 691
Query: 367 AAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELG 426
A GRW DV R+R ++R KG++K S V + +FV + + + +Y +L +
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHM 751
Query: 427 AHIK 430
IK
Sbjct: 752 QRIK 755
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 173/365 (47%), Gaps = 58/365 (15%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP---------- 50
MYS +SDAR +FD D+VS+NS+I+ + K G+ A ++F M
Sbjct: 171 MYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNI 230
Query: 51 ------------------------------VRDVWNWNCMIAGYVAVGDLEAANELFERM 80
+++++ NC++ Y G ++ AN +F M
Sbjct: 231 TLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM 290
Query: 81 PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRAKSFWECL 136
+DVVSWN M+ G ++G A+ F +M +VV+W++ ++ + + +E L
Sbjct: 291 SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350
Query: 137 KMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF-------IKSNNIKVDVLL 189
+ +M+ SG PNE TL+SVL+ CA +G L G +H + ++ N + ++
Sbjct: 351 GVCRQMLSSG-IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMV 409
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPV--RNVVSWNSMIMGYGLHGNGEKALELFLEM--E 245
L+ MY KC +D AR +FD + R+VV+W MI GY HG+ KALEL EM E
Sbjct: 410 INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEE 469
Query: 246 KKGPKPNDATFVCVLSACTH-AGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
+PN T C L AC A + + + +R N P C++D+ A+ G
Sbjct: 470 DCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGS 528
Query: 305 VKNSE 309
+ ++
Sbjct: 529 ISDAR 533
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 148/340 (43%), Gaps = 84/340 (24%)
Query: 12 RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRD--VWNWNCMIAGYVAVGD 69
+LL LTL+L S+ +I ++ G A L P D V++WN +I Y GD
Sbjct: 50 KLLSFGILTLNLTSH--LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSY---GD 104
Query: 70 LEAANE---LFERM------PDR-----------DVVSWNC--------MIDGCVR---V 98
AN+ LF M PD ++ S C ++ G + V
Sbjct: 105 NGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFV 164
Query: 99 GNVPLAL-----------EFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGE 147
GN +A+ + F+ M +VVSWNS++ + + L+MF M
Sbjct: 165 GNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG 224
Query: 148 AVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLAR 207
P+ TLV+VL CA LG S+G +H F ++ + ++ + CL+ MY KCG MD A
Sbjct: 225 CRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEAN 284
Query: 208 DVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK-------------------- 247
VF M V++VVSWN+M+ GY G E A+ LF +M+++
Sbjct: 285 TVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRG 344
Query: 248 ---------------GPKPNDATFVCVLSACTHAGMVMEG 272
G KPN+ T + VLS C G +M G
Sbjct: 345 LGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 108/237 (45%), Gaps = 17/237 (7%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARN--VVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
+I + VG + A+ R P + V WNS++ + +CL +F +M S
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFG-LMHSLSW 123
Query: 149 VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
P+ T V AC + + G H+ +V + L+ MY +C ++ AR
Sbjct: 124 TPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARK 183
Query: 209 VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK-GPKPNDATFVCVLSACTHAG 267
VFDEM V +VVSWNS+I Y G + ALE+F M + G +P++ T V VL C G
Sbjct: 184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 268 MVMEGWWYFDLMRRVYNIEPKVEHY------GCIVDLLARAGLVKNSEELIKYVSVK 318
L ++++ E C+VD+ A+ G++ + + +SVK
Sbjct: 244 T-------HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK 293
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 154/447 (34%), Positives = 244/447 (54%), Gaps = 32/447 (7%)
Query: 4 VFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNG---ETGAARKLFDEMPVR-DVWNWNC 59
V G + AR +FD + +N++ G+V+N E+ K ++ VR D + +
Sbjct: 55 VIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPF 114
Query: 60 MIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCV---------RVGNVPLALEFFNR 110
++ +GD L VV + G V + G + A F
Sbjct: 115 VVKAISQLGDFSCGFALHAH-----VVKYGFGCLGIVATELVMMYMKFGELSSAEFLFES 169
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA-TLVSVLTACAHLGKLS 169
M +++V+WN+ LA+ V+ + L+ F++M +AV ++ T+VS+L+AC LG L
Sbjct: 170 MQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM--CADAVQFDSFTVVSMLSACGQLGSLE 227
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
+G ++ + I ++++ L M++KCG + AR +F+EM RNVVSW++MI+GY
Sbjct: 228 IGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYA 287
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV--YNIEP 287
++G+ +AL LF M+ +G +PN TF+ VLSAC+HAG+V EG YF LM + N+EP
Sbjct: 288 MNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEP 347
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
+ EHY C+VDLL R+GL++ + E IK + V+ C H D LG+ VA
Sbjct: 348 RKEHYACMVDLLGRSGLLEEAYEFIKKMPVE-PDTGIWGALLGACAVHRDMILGQKVADV 406
Query: 348 LIELEPMDIGPY-IMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESK-- 404
L+E P DIG Y ++LSN YAA G+WD V++VR +R+ G +K AA S V +FE K
Sbjct: 407 LVETAP-DIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSV---EFEGKIH 462
Query: 405 YFVKNYSVH-RKRIMYSMLSELGAHIK 430
+F + H + + +Y L E+ I+
Sbjct: 463 FFNRGDKSHPQSKAIYEKLDEILKKIR 489
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 126/258 (48%), Gaps = 16/258 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MY FG +S A LF+S DLV++N+ + V+ G + A + F++M D +
Sbjct: 153 MYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFT 212
Query: 57 WNCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
M++ +G LE E+++R D +++ N +D ++ GN A F M
Sbjct: 213 VVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMK 272
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
RNVVSW++M+ + E L +F M G PN T + VL+AC+H G ++ G
Sbjct: 273 QRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEG-LRPNYVTFLGVLSACSHAGLVNEGK 331
Query: 173 WVHSF-IKSN--NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGY 228
S ++SN N++ C++ + + G ++ A + +MPV + W +++
Sbjct: 332 RYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGAC 391
Query: 229 GLHGN---GEKALELFLE 243
+H + G+K ++ +E
Sbjct: 392 AVHRDMILGQKVADVLVE 409
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 1/191 (0%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
+++ V +G++ A + F+ M + WN++ +VR + +E L ++ +M + G P
Sbjct: 49 LLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLG-VRP 107
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
+E T V+ A + LG S G +H+ + +++T L+ MY+K G + A +F
Sbjct: 108 DEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLF 167
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVM 270
+ M V+++V+WN+ + GN ALE F +M + + T V +LSAC G +
Sbjct: 168 ESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLE 227
Query: 271 EGWWYFDLMRR 281
G +D R+
Sbjct: 228 IGEEIYDRARK 238
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 223/424 (52%), Gaps = 7/424 (1%)
Query: 12 RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WNWNCMIAGYVAV 67
RL + ++VS+ +MI G ++N A LF EM + V + ++ ++ +
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI 410
Query: 68 GDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHV 127
E ++ + +R ++D V++G V A + F+ + +++V+W++MLA +
Sbjct: 411 SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYA 470
Query: 128 RAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL-GKLSVGMWVHSFIKSNNIKVD 186
+ +KMF E+ + G PNE T S+L CA + G H F + +
Sbjct: 471 QTGETEAAIKMFGELTKGG-IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSS 529
Query: 187 VLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEK 246
+ +S+ LLTMY K G ++ A +VF +++VSWNSMI GY HG KAL++F EM+K
Sbjct: 530 LCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKK 589
Query: 247 KGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVK 306
+ K + TF+ V +ACTHAG+V EG YFD+M R I P EH C+VDL +RAG ++
Sbjct: 590 RKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLE 649
Query: 307 NSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTY 366
+ ++I+ + C H +ELG + A+++I ++P D Y++LSN Y
Sbjct: 650 KAMKVIENMP-NPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMY 708
Query: 367 AAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELG 426
A G W + +VR ++ E+ ++KE S + +++ + + S K +Y L +L
Sbjct: 709 AESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLS 768
Query: 427 AHIK 430
+K
Sbjct: 769 TRLK 772
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 143/315 (45%), Gaps = 26/315 (8%)
Query: 5 FGRVSDARL-----LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNC 59
FG VS +RL LFD S D SY S++ G ++G T A++LF + R +C
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIH-RLGMEMDC 93
Query: 60 MIAGYVAVGDLEAANELFERMPD---------RDVVSWNCMIDGCVRVGNVPLALEFFNR 110
I V +ELF R DV ++D ++ N + F+
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
M RNVV+W ++++ + R E L +F M G PN T + L A G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ-PNSFTFAAALGVLAEEGVGGR 212
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G+ VH+ + N + + +S L+ +Y+KCG + AR +FD+ V++VV+WNSMI GY
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
+G +AL +F M + ++++F V+ C + +R + V
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN----------LKELRFTEQLHCSVV 322
Query: 291 HYGCIVDLLARAGLV 305
YG + D R L+
Sbjct: 323 KYGFLFDQNIRTALM 337
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 151/330 (45%), Gaps = 30/330 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y G V AR+LFD + +V++NSMI G+ NG A +F M + V
Sbjct: 238 LYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESS 297
Query: 61 IAGYVAVGDLEAANELFERMPDR---DVVSWNCMIDGCVRVGNVPL---------ALEFF 108
A + + AN R ++ VV + + D +R + AL F
Sbjct: 298 FASVIKL----CANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLF 353
Query: 109 NRMP-ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
+ NVVSW +M++ ++ E + +F EM G PNE T +LTA +
Sbjct: 354 KEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG-VRPNEFTYSVILTALPVISP 412
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
VH+ + N + + T LL YVK G ++ A VF + +++V+W++M+ G
Sbjct: 413 SE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAG 468
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
Y G E A+++F E+ K G KPN+ TF +L+ C M F + I+
Sbjct: 469 YAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF----HGFAIKS 524
Query: 288 KVEHYGCIVDLL----ARAGLVKNSEELIK 313
+++ C+ L A+ G ++++EE+ K
Sbjct: 525 RLDSSLCVSSALLTMYAKKGNIESAEEVFK 554
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 2/225 (0%)
Query: 94 GCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA 153
G V + A F++ P R+ S+ S+L R E ++F + G + + +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEM-DCS 94
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM 213
SVL A L G +H DV + T L+ Y+K R VFDEM
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 214 PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGW 273
RNVV+W ++I GY + ++ L LF+ M+ +G +PN TF L G+ G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 274 WYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
++ + ++ + +++L + G V+ + L VK
Sbjct: 215 QVHTVVVK-NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK 258
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 230/457 (50%), Gaps = 44/457 (9%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDV- 85
+ ++ +++ G A KLFDEMP RD+ +WN +I+GY G L E+ RM +V
Sbjct: 70 DQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVG 129
Query: 86 -----VSWNCMIDGCV-----------------------------------RVGNVPLAL 105
V++ MI CV + G++ +
Sbjct: 130 FRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSC 189
Query: 106 EFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL 165
+ F + +N+VSWN+M+ +H++ + L F+ G P++AT ++VL +C +
Sbjct: 190 KLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE-PDQATFLAVLRSCEDM 248
Query: 166 GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI 225
G + + +H I + ++T LL +Y K G ++ + VF E+ + ++W +M+
Sbjct: 249 GVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAML 308
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNI 285
Y HG G A++ F M G P+ TF +L+AC+H+G+V EG YF+ M + Y I
Sbjct: 309 AAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRI 368
Query: 286 EPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVA 345
+P+++HY C+VDLL R+GL++++ LIK + ++ C + D++LG A
Sbjct: 369 DPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPME-PSSGVWGALLGACRVYKDTQLGTKAA 427
Query: 346 KRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKY 405
+RL ELEP D Y+MLSN Y+A G W D R+R ++++KGL + + S + + K+
Sbjct: 428 ERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKF 487
Query: 406 FVKNYSVHRKRIMYSMLSELGAHIKLSPAGSIEKDNF 442
V ++S + L E+ +K S G K F
Sbjct: 488 VVGDWSHPESEKIQKKLKEIRKKMK-SEMGYKSKTEF 523
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/301 (38%), Positives = 180/301 (59%), Gaps = 8/301 (2%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAK---SFWECLKMFDEMMESGEAVPNEATL 155
G + A F R+ ++ +WN++LA + ++ S E L +F M + PNE +L
Sbjct: 164 GKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM----QVRPNELSL 219
Query: 156 VSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV 215
V+++ +CA+LG+ G+W H ++ NN+ ++ + T L+ +Y KCG + AR VFDEM
Sbjct: 220 VALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQ 279
Query: 216 RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWY 275
R+V +N+MI G +HG G++ +EL+ + +G P+ ATFV +SAC+H+G+V EG
Sbjct: 280 RDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQI 339
Query: 276 FDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTH 335
F+ M+ VY IEPKVEHYGC+VDLL R+G ++ +EE IK + VK TH
Sbjct: 340 FNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSS-QTH 398
Query: 336 MDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSV 395
D E GEI K L+ LE + G Y++LSN YA RW DVE+ R ++++ + K S
Sbjct: 399 GDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIST 458
Query: 396 V 396
+
Sbjct: 459 L 459
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 128/293 (43%), Gaps = 54/293 (18%)
Query: 6 GRVSDARLL-FDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGY 64
GR A +L F + D +++ + G+ AR LF+ + D+ WN ++A Y
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 65 VAVGDLEAANE---LFERMPDR-DVVSWNCMIDGCVRVGN-------------------- 100
++++ E LF RM R + +S +I C +G
Sbjct: 192 ANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQ 251
Query: 101 ---------------VPLALEFFNRMPARNVVSWNSM---LALHVRAKSFWECLKMFDEM 142
+ A + F+ M R+V +N+M LA+H + E ++++ +
Sbjct: 252 FVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQ---EGIELYKSL 308
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS-NNIKVDVLLSTCLLTMYVKCG 201
+ G VP+ AT V ++AC+H G + G+ + + +K+ I+ V CL+ + + G
Sbjct: 309 ISQG-LVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSG 367
Query: 202 AMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALE--LFLEMEKKG 248
++ A + +MPV+ N W S + HG+ GE AL+ L LE E G
Sbjct: 368 RLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSG 420
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWE---CLKMFDEMMESGEAV--PNEATLVSV 158
AL ++P +V +N++++ V + + ++D+++ S PNE T S+
Sbjct: 59 ALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSL 118
Query: 159 LTAC---AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV 215
A A + + H + D + L+ Y CG + AR +F+ +
Sbjct: 119 FKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIRE 178
Query: 216 RNVVSWNSMIMGYGLH---GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
++ +WN+++ Y + E+ L LF+ M+ +PN+ + V ++ +C + G + G
Sbjct: 179 PDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRG 235
Query: 273 WW 274
W
Sbjct: 236 VW 237
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 209/404 (51%), Gaps = 40/404 (9%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP----- 81
N +I+ +VK A +LFD+MP R+V +W MI+ Y + A EL M
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 82 -------------------------------DRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+ DV + +ID ++G AL F+
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
M + + WNS++ + L++F M +G + +ATL SVL AC L L +
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAG-FIAEQATLTSVLRACTGLALLEL 278
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
GM H I + D++L+ L+ MY KCG+++ A VF++M R+V++W++MI G
Sbjct: 279 GMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ 336
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
+G ++AL+LF M+ G KPN T V VL AC+HAG++ +GW+YF M+++Y I+P E
Sbjct: 337 NGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE 396
Query: 291 HYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIE 350
HYGC++DLL +AG + ++ +L+ + + C + L E AK++I
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLLNEMECE-PDAVTWRTLLGACRVQRNMVLAEYAAKKVIA 455
Query: 351 LEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
L+P D G Y +LSN YA +WD VE +R +R++G++KE S
Sbjct: 456 LDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCS 499
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 136 LKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLT 195
+K D + G + AT ++ C + G + + N + + L L+
Sbjct: 46 MKAMDSLQSHG-LWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 196 MYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDAT 255
MYVK ++ A +FD+MP RNV+SW +MI Y +KALEL + M + +PN T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 256 FVCVLSACT--------HAGMVMEG 272
+ VL +C H G++ EG
Sbjct: 165 YSSVLRSCNGMSDVRMLHCGIIKEG 189
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 142/423 (33%), Positives = 221/423 (52%), Gaps = 45/423 (10%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFE 78
L DL + +S+ID + K G ARK+F +P V + N +IAGY + +LE A LF+
Sbjct: 560 LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQ 618
Query: 79 RMPDRDV----VSWNCMIDGCVRVGNVPLALEFFNRMPAR-------------------- 114
M R V +++ +++ C + ++ L +F ++ R
Sbjct: 619 EMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNS 678
Query: 115 -----------------NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
++V W M++ H + + E LK + EM G +P++AT V+
Sbjct: 679 RGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDG-VLPDQATFVT 737
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR- 216
VL C+ L L G +HS I +D L S L+ MY KCG M + VFDEM R
Sbjct: 738 VLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS 797
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF 276
NVVSWNS+I GY +G E AL++F M + P++ TF+ VL+AC+HAG V +G F
Sbjct: 798 NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIF 857
Query: 277 DLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHM 336
++M Y IE +V+H C+VDLL R G ++ +++ I+ ++K C H
Sbjct: 858 EMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLK-PDARLWSSLLGACRIHG 916
Query: 337 DSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
D GEI A++LIELEP + Y++LSN YA+QG W+ +R ++R++G++K S +
Sbjct: 917 DDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWI 976
Query: 397 HLE 399
+E
Sbjct: 977 DVE 979
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 151/290 (52%), Gaps = 6/290 (2%)
Query: 28 SMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDR---- 83
+++D + K AR++F+ + + W C+ +GYV G E A +FERM D
Sbjct: 200 ALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRP 259
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM 143
D +++ +I+ +R+G + A F M + +VV+WN M++ H + ++ F M
Sbjct: 260 DHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMR 319
Query: 144 ESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAM 203
+S +TL SVL+A + L +G+ VH+ + ++ + + L++MY KC M
Sbjct: 320 KS-SVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKM 378
Query: 204 DLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
+ A VF+ + +N V WN+MI GY +G K +ELF++M+ G +D TF +LS C
Sbjct: 379 EAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTC 438
Query: 264 THAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
+ + G + ++ + + + +VD+ A+ G ++++ ++ +
Sbjct: 439 AASHDLEMGSQFHSIIIK-KKLAKNLFVGNALVDMYAKCGALEDARQIFE 487
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 139/271 (51%), Gaps = 10/271 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MYS ++ A +F++ + V +N+MI G+ NGE+ +LF +M D +
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 57 WNCMIAGYVAVGDLEAANE----LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ +++ A DLE ++ + ++ +++ N ++D + G + A + F RM
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R+ V+WN+++ +V+ ++ E +F M G V + A L S L AC H+ L G
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG-IVSDGACLASTLKACTHVHGLYQGK 549
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
VH + D+ + L+ MY KCG + AR VF +P +VVS N++I GY
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QN 608
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
N E+A+ LF EM +G P++ TF ++ AC
Sbjct: 609 NLEEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 149/319 (46%), Gaps = 10/319 (3%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y G++ DARLLF + D+V++N MI GH K G A + F M V + +
Sbjct: 271 YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330
Query: 62 A------GYVAVGDLE--AANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
G VA DL E + ++ + ++ + + A + F +
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
+N V WN+M+ + + +++F +M SG + ++ T S+L+ CA L +G
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI-DDFTFTSLLSTCAASHDLEMGSQ 449
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
HS I + ++ + L+ MY KCGA++ AR +F+ M R+ V+WN++I Y N
Sbjct: 450 FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDEN 509
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYG 293
+A +LF M G + A L ACTH + +G L + ++ +
Sbjct: 510 ESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKC-GLDRDLHTGS 568
Query: 294 CIVDLLARAGLVKNSEELI 312
++D+ ++ G++K++ ++
Sbjct: 569 SLIDMYSKCGIIKDARKVF 587
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 11/238 (4%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNV 101
+RK+FDEMP R +A + +G + L + D + N ++D + V
Sbjct: 61 SRKVFDEMPQR--------LALALRIGKAVHSKSLILGI-DSEGRLGNAIVDLYAKCAQV 111
Query: 102 PLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
A + F+ + ++V +WNSML+++ + L+ F + E+ + PN+ T VL+
Sbjct: 112 SYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFEN-QIFPNKFTFSIVLST 169
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
CA + G +H + ++ + L+ MY KC + AR VF+ + N V W
Sbjct: 170 CARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCW 229
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM 279
+ GY G E+A+ +F M +G +P+ FV V++ G + + F M
Sbjct: 230 TCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM 287
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR-DVWNWNCMIAGYVAVGDLE 71
L+F + LD ++ N++ID + K G+ + ++FDEM R +V +WN +I GY G E
Sbjct: 757 LIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAE 816
Query: 72 AANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR-NVVSWNSMLALH 126
A ++F+ M D +++ ++ C G V + F M + + + +A
Sbjct: 817 DALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACM 876
Query: 127 VRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
V W L+ D+ +E+ P+ S+L AC
Sbjct: 877 VDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGAC 912
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 216/413 (52%), Gaps = 38/413 (9%)
Query: 20 TLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFER 79
T D++ S++D + K GE A ++F+ M R++ WN MI Y G + A F++
Sbjct: 264 TGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQK 323
Query: 80 MPDRD------VVSWN------------------------------CMIDGCVRVGNVPL 103
M +++ + S N +ID G +
Sbjct: 324 MSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKS 383
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
A F+RM +NV+SWNS++A +V+ + L++F E+ +S VP+ T+ S+L A A
Sbjct: 384 AEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDS-SLVPDSTTIASILPAYA 442
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
LS G +H++I + + ++ L+ MY CG ++ AR F+ + +++VVSWNS
Sbjct: 443 ESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNS 502
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVY 283
+IM Y +HG G ++ LF EM PN +TF +L+AC+ +GMV EGW YF+ M+R Y
Sbjct: 503 IIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREY 562
Query: 284 NIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEI 343
I+P +EHYGC++DL+ R G ++ ++ + H D + E
Sbjct: 563 GIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPF-VPTARIWGSLLNASRNHKDITIAEF 621
Query: 344 VAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
A+++ ++E + G Y++L N YA GRW+DV R+++++ KG+ + ++ S V
Sbjct: 622 AAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTV 674
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 133/291 (45%), Gaps = 44/291 (15%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM- 80
D+ NS+I ++K G A K+F+EMP RD+ +WN MI+GY+A+GD ++ LF+ M
Sbjct: 164 DVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEML 223
Query: 81 -----PDR----------------------------------DVVSWNCMIDGCVRVGNV 101
PDR DV+ ++D + G V
Sbjct: 224 KCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEV 283
Query: 102 PLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
A FN M RN+V+WN M+ + R + F +M E P+ T +++L A
Sbjct: 284 SYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA 343
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
A L G +H + ++L T L+ MY +CG + A +FD M +NV+SW
Sbjct: 344 SAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISW 399
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
NS+I Y +G ALELF E+ P+ T +L A + + EG
Sbjct: 400 NSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEG 450
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 41/271 (15%)
Query: 51 VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
V DV+ N +I+ Y+ +G A ++FE MP+RD+VSWN MI G + +G+
Sbjct: 162 VSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDG--------- 212
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
+ L +F EM++ G P+ + +S L AC+H+ +
Sbjct: 213 ----------------------FSSLMLFKEMLKCGFK-PDRFSTMSALGACSHVYSPKM 249
Query: 171 GMWVHSFIKSNNIKV-DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
G +H + I+ DV++ T +L MY K G + A +F+ M RN+V+WN MI Y
Sbjct: 250 GKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYA 309
Query: 230 LHGNGEKALELFLEM-EKKGPKPNDATFVCVLSACT-HAGMVMEGWWYFDLMRRVYNIEP 287
+G A F +M E+ G +P+ T + +L A G + G+ MRR + P
Sbjct: 310 RNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGY----AMRRGF--LP 363
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+ ++D+ G +K++E + ++ K
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEK 394
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 92/196 (46%), Gaps = 32/196 (16%)
Query: 70 LEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRA 129
+E A +LF+ M D WN MI G G A++F++RM + V+A
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM-----------VFAGVKA 128
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
+F T V+ + A + L G +H+ + DV +
Sbjct: 129 DTF---------------------TYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYV 167
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP 249
L+++Y+K G A VF+EMP R++VSWNSMI GY G+G +L LF EM K G
Sbjct: 168 CNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGF 227
Query: 250 KPNDATFVCVLSACTH 265
KP+ + + L AC+H
Sbjct: 228 KPDRFSTMSALGACSH 243
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 228/444 (51%), Gaps = 20/444 (4%)
Query: 3 SVFGRVSD---ARLLFDSSLTLD--LVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWN- 56
S +G+ D A+L+F++ D +VS+NSM + GE A L+ M +R+ +
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM-LREEFKP 254
Query: 57 ---------WNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEF 107
+C + G L ++ + D+D+ + N I + + A
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAI-HLGTDQDIEAINTFISMYSKSEDTCSARLL 313
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F+ M +R VSW M++ + E L +F M++SGE P+ TL+S+++ C G
Sbjct: 314 FDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEK-PDLVTLLSLISGCGKFGS 372
Query: 168 LSVGMWVHSFIKSNNIKVD-VLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
L G W+ + K D V++ L+ MY KCG++ ARD+FD P + VV+W +MI
Sbjct: 373 LETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIA 432
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
GY L+G +AL+LF +M KPN TF+ VL AC H+G + +GW YF +M++VYNI
Sbjct: 433 GYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS 492
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAK 346
P ++HY C+VDLL R G ++ + ELI+ +S K C H + ++ E A+
Sbjct: 493 PGLDHYSCMVDLLGRKGKLEEALELIRNMSAK-PDAGIWGALLNACKIHRNVKIAEQAAE 551
Query: 347 RLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYF 406
L LEP PY+ ++N YAA G WD R+R +++++ ++K SV+ + +
Sbjct: 552 SLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFT 611
Query: 407 VKNYSVHRKRIMYSMLSELGAHIK 430
V + ++Y L+ L K
Sbjct: 612 VGEHGHVENEVIYFTLNGLSLFAK 635
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 138/351 (39%), Gaps = 64/351 (18%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
L S D+ + +D VK A K+F+ MP RD WN M++G+ G + A
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA 137
Query: 74 NELFERM------PDRDVV------------------------------------SWNCM 91
LF M PD V +W
Sbjct: 138 FSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIST 197
Query: 92 IDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPN 151
C + + L E +R R VVSWNSM + ++ ++ M+ E P+
Sbjct: 198 YGKCGDLDSAKLVFEAIDR-GDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE-EFKPD 255
Query: 152 EATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFD 211
+T +++ +C + L+ G +HS D+ ++MY K AR +FD
Sbjct: 256 LSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD 315
Query: 212 EMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
M R VSW MI GY G+ ++AL LF M K G KP+ T + ++S C G +
Sbjct: 316 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET 375
Query: 272 GWWYFDLMRRVYNIEPKVEHYGC----------IVDLLARAGLVKNSEELI 312
G W I+ + + YGC ++D+ ++ G + + ++
Sbjct: 376 GKW----------IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIF 416
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
Query: 115 NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV 174
+V +WN + V E L +F EM G PN T V ACA L + V
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFE-PNNFTFPFVAKACARLADVGCCEMV 74
Query: 175 HSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNG 234
H+ + + DV + T + M+VKC ++D A VF+ MP R+ +WN+M+ G+ G+
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 235 EKALELFLEMEKKGPKPNDATFVCVLSACT 264
+KA LF EM P+ T + ++ + +
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSAS 164
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/411 (31%), Positives = 207/411 (50%), Gaps = 42/411 (10%)
Query: 28 SMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDR---- 83
S+++ + + G +A+K+FDE+PVR+ W ++ GY+ LF M D
Sbjct: 149 SLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLAL 208
Query: 84 DVVSWNCMIDGC--VRVGNVPL----------------------------------ALEF 107
D ++ C++ C V G V A +
Sbjct: 209 DALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKL 268
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F RNVV W ++++ + + E +F +M+ +PN+ TL ++L +C+ LG
Sbjct: 269 FETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE-SILPNQCTLAAILVSCSSLGS 327
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L G VH ++ N I++D + T + MY +CG + +AR VFD MP RNV+SW+SMI
Sbjct: 328 LRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINA 387
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
+G++G E+AL+ F +M+ + PN TFV +LSAC+H+G V EGW F+ M R Y + P
Sbjct: 388 FGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVP 447
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
+ EHY C+VDLL RAG + ++ I + VK C H + +L +A++
Sbjct: 448 EEEHYACMVDLLGRAGEIGEAKSFIDNMPVK-PMASAWGALLSACRIHKEVDLAGEIAEK 506
Query: 348 LIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHL 398
L+ +EP Y++LSN YA G W+ V VR + KG +K S +
Sbjct: 507 LLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 113/234 (48%), Gaps = 5/234 (2%)
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRMPA--RNVVSWNSMLALHVRAKS--FWECLKMF 139
+VV + + + ++ + A FNR+P RN SWN++L+ + ++K+ + + L ++
Sbjct: 38 EVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLY 97
Query: 140 DEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVK 199
+ M + V + LV + AC LG L G+ +H N + D ++ L+ MY +
Sbjct: 98 NRMRRHCDGV-DSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQ 156
Query: 200 CGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCV 259
G M+ A+ VFDE+PVRN V W ++ GY + + LF M G + T +C+
Sbjct: 157 LGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICL 216
Query: 260 LSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
+ AC + G + R I+ I+D+ + L+ N+ +L +
Sbjct: 217 VKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFE 270
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 112/226 (49%), Gaps = 3/226 (1%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D+D +++ ++G + A + F+ +P RN V W ++ +++ E ++F
Sbjct: 141 DKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCL 200
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF-IKSNNIKVDVLLSTCLLTMYVKC 200
M ++G A+ + TL+ ++ AC ++ VG VH I+ + I L ++ MYVKC
Sbjct: 201 MRDTGLAL-DALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKC 259
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
+D AR +F+ RNVV W ++I G+ +A +LF +M ++ PN T +L
Sbjct: 260 RLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAIL 319
Query: 261 SACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVK 306
+C+ G + G M R IE ++ +D+ AR G ++
Sbjct: 320 VSCSSLGSLRHGKSVHGYMIR-NGIEMDAVNFTSFIDMYARCGNIQ 364
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 221 bits (564), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 133/406 (32%), Positives = 215/406 (52%), Gaps = 36/406 (8%)
Query: 28 SMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVS 87
S+ID + K G+ +A++ FDEM V+D+ W +I+GY +GD+EAA +LF MP+++ VS
Sbjct: 219 SIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVS 278
Query: 88 WNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGE 147
W +I G VR G+ AL+ F + M+AL V+
Sbjct: 279 WTALIAGYVRQGSGNRALDLFRK-----------MIALGVK------------------- 308
Query: 148 AVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLAR 207
P + T S L A A + L G +H ++ N++ + ++ + L+ MY K G+++ +
Sbjct: 309 --PEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASE 366
Query: 208 DVFDEMPVR-NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHA 266
VF + + V WN+MI HG G KAL + +M K +PN T V +L+AC+H+
Sbjct: 367 RVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHS 426
Query: 267 GMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXX 326
G+V EG +F+ M + I P EHY C++DLL RAG K I+ + +
Sbjct: 427 GLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFE-PDKHIWN 485
Query: 327 XXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKG 386
C H + ELG+ A LI+L+P PYI+LS+ YA G+W+ VE++R +++++
Sbjct: 486 AILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRR 545
Query: 387 LQKEAASSVVHLEDFESKYFVKN--YSVHRKRIMYSMLSELGAHIK 430
+ KE A S + +E + V + ++ RK +Y +L L A I+
Sbjct: 546 VNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVIE 591
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 150/291 (51%), Gaps = 10/291 (3%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
N +I ++K G+ A K+FD+M +R++++WN M++GYV G L A +F+ MP+RDVV
Sbjct: 86 NHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVV 145
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRAKSFWECLKMFDEM 142
SWN M+ G + GN+ AL F+ N S+ +L V+++ + ++
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
+ +G + N S++ A A G++ +K D+ + T L++ Y K G
Sbjct: 206 LVAG-FLSNVVLSCSIIDAYAKCGQMESA---KRCFDEMTVK-DIHIWTTLISGYAKLGD 260
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
M+ A +F EMP +N VSW ++I GY G+G +AL+LF +M G KP TF L A
Sbjct: 261 MEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCA 320
Query: 263 CTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
+ G M R N+ P ++D+ +++G ++ SE + +
Sbjct: 321 SASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEASERVFR 370
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 33/185 (17%)
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
R + S L+ H + + + + + G +P + L S+L C L G W
Sbjct: 9 RPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFD-LLASLLQQCGDTKSLKQGKW 67
Query: 174 VHSFIKSNNIK-VDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS------------ 220
+H +K K + LLS L+ MY+KCG A VFD+M +RN+ S
Sbjct: 68 IHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSG 127
Query: 221 -------------------WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
WN+M++GY GN +AL + E + G K N+ +F +L+
Sbjct: 128 MLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLT 187
Query: 262 ACTHA 266
AC +
Sbjct: 188 ACVKS 192
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 221 bits (564), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 191/339 (56%), Gaps = 4/339 (1%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
++ YV G LE+A +FE M D +VV MI G + G V A E FN +++V
Sbjct: 179 TALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIV 238
Query: 118 SWNSMLALHVRA-KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
+N+M+ R+ ++ + M+ M +G PN +T SV+ AC+ L VG VH+
Sbjct: 239 VYNAMVEGFSRSGETAKRSVDMYISMQRAGFH-PNISTFASVIGACSVLTSHEVGQQVHA 297
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
I + + + + + LL MY KCG ++ AR VFD+M +NV SW SMI GYG +GN E+
Sbjct: 298 QIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEE 357
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIV 296
ALELF M++ +PN TF+ LSAC+H+G+V +G+ F+ M+R Y+++PK+EHY CIV
Sbjct: 358 ALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIV 417
Query: 297 DLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEP-MD 355
DL+ RAG + + E + + + C H + EL I A L +L
Sbjct: 418 DLMGRAGDLNKAFEFARAMPER-PDSDIWAALLSSCNLHGNVELASIAASELFKLNADKR 476
Query: 356 IGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
G Y+ LSN YA+ +WD+V ++R +++ + + K S
Sbjct: 477 PGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
G +H+ I + D+ +S LL +++KCG + AR VFDE+P + ++N MI GY
Sbjct: 52 AGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYL 111
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVM 270
HG ++ L L M G K + T VL A G M
Sbjct: 112 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTM 152
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP-VRDVWNWNC 59
MY+ G ++DAR +FD ++ S+ SMIDG+ KNG A +LF M R N+
Sbjct: 317 MYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVT 376
Query: 60 MIAGYVAV---GDLEAANELFERMPDRD------VVSWNCMIDGCVRVGNVPLALEFFNR 110
+ A G ++ E+FE M RD + + C++D R G++ A EF
Sbjct: 377 FLGALSACSHSGLVDKGYEIFESM-QRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARA 435
Query: 111 MPAR 114
MP R
Sbjct: 436 MPER 439
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 221 bits (564), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 220/419 (52%), Gaps = 26/419 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDE--MPVRDVWNWN 58
MYS G V + +F S D+VS+N+MI V+NG L DE M V ++
Sbjct: 362 MYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNG-------LDDEGLMLVYEMQKQG 414
Query: 59 CMIAGYVAVGDLEAANELFERMPDRDVVSW------------NCMIDGCVRVGNVPLALE 106
I L AA+ L + + ++ + +ID + G + ++ +
Sbjct: 415 FKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQK 474
Query: 107 FF--NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
F + R+ +WNSM++ + + + +F +M+E PN T+ S+L AC+
Sbjct: 475 LFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQN-IRPNAVTVASILPACSQ 533
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSM 224
+G + +G +H F + +V +++ L+ MY K GA+ A D+F + RN V++ +M
Sbjct: 534 IGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTM 593
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYN 284
I+GYG HG GE+A+ LFL M++ G KP+ TFV VLSAC+++G++ EG F+ MR VYN
Sbjct: 594 ILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYN 653
Query: 285 IEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIV 344
I+P EHY CI D+L R G V + E +K + + C H + EL E V
Sbjct: 654 IQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETV 713
Query: 345 AKRLIELEPMD--IGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDF 401
++RL + + G ++LSN YA + +W V++VR +REKGL+KE S + + +
Sbjct: 714 SERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGY 772
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 161/326 (49%), Gaps = 20/326 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM-----PVRDVW 55
MY+ G + +R +FDS + ++ +N+MI +V+N + +LF E V D
Sbjct: 260 MYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEV 319
Query: 56 NWNCMIAGYVAVGDLEAANEL-------FERMPDRDVVSWNCMIDGCVRVGNVPLALEFF 108
+ + A+ +E + F +P +V N ++ R G+V + F
Sbjct: 320 TYLLAASAVSALQQVELGRQFHGFVSKNFRELP---IVIVNSLMVMYSRCGSVHKSFGVF 376
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
M R+VVSWN+M++ V+ E L + EM + G + + T+ ++L+A ++L
Sbjct: 377 LSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKI-DYITVTALLSAASNLRNK 435
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFD--EMPVRNVVSWNSMIM 226
+G H+F+ I+ + +++ L+ MY K G + +++ +F+ R+ +WNSMI
Sbjct: 436 EIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMIS 494
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
GY +G+ EK +F +M ++ +PN T +L AC+ G V G R Y ++
Sbjct: 495 GYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY-LD 553
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELI 312
V +VD+ ++AG +K +E++
Sbjct: 554 QNVFVASALVDMYSKAGAIKYAEDMF 579
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 158/333 (47%), Gaps = 54/333 (16%)
Query: 12 RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM--------PV------------ 51
R +FD+ ++V++N++I +VK G A + F M PV
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
Query: 52 RDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
R + N + +GD E +LF VVS I +G++ + F+
Sbjct: 228 RSIKKANVFYGLMLKLGD-EYVKDLF-------VVS--SAISMYAELGDIESSRRVFDSC 277
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
RN+ WN+M+ ++V+ E +++F E + S E V +E T + +A + L ++ +G
Sbjct: 278 VERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELG 337
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
H F+ N ++ +++ L+ MY +CG++ + VF M R+VVSWN+MI + +
Sbjct: 338 RQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQN 397
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSAC-----------THAGMVMEGWWYFDLMR 280
G ++ L L EM+K+G K + T +LSA THA ++ +G F+ M
Sbjct: 398 GLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMN 456
Query: 281 RVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
++D+ +++GL++ S++L +
Sbjct: 457 SY------------LIDMYSKSGLIRISQKLFE 477
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 7/191 (3%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA-TLVS 157
GN LA + F+ +P V WN+++ + E L + M ++ +A T S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC------GAMDLARDVFD 211
L ACA L G VH + ++ L+ MYV C D+ R VFD
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 212 EMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
M +NVV+WN++I Y G +A F M + KP+ +FV V A + + + +
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 272 GWWYFDLMRRV 282
++ LM ++
Sbjct: 233 ANVFYGLMLKL 243
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 131/323 (40%), Gaps = 53/323 (16%)
Query: 18 SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELF 77
+LT S S + ++G AR+LFD +P WN +I G++ A +
Sbjct: 34 TLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFY 93
Query: 78 ERMPDR------DVVSWNCMIDGCVRVGNV------------------------------ 101
RM D +++ + C N+
Sbjct: 94 SRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYV 153
Query: 102 -----PLALEF------FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
P E+ F+ M +NVV+WN++++ +V+ E + F MM E P
Sbjct: 154 SCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRM-EVKP 212
Query: 151 NEATLVSVLTACA---HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLAR 207
+ + V+V A + + K +V + + +K D+ + + ++MY + G ++ +R
Sbjct: 213 SPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVK-DLFVVSSAISMYAELGDIESSR 271
Query: 208 DVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLE-MEKKGPKPNDATFVCVLSACTHA 266
VFD RN+ WN+MI Y + +++ELFLE + K ++ T++ SA +
Sbjct: 272 RVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSAL 331
Query: 267 GMVMEGWWYFDLMRRVYNIEPKV 289
V G + + + + P V
Sbjct: 332 QQVELGRQFHGFVSKNFRELPIV 354
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 221 bits (563), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 147/511 (28%), Positives = 229/511 (44%), Gaps = 113/511 (22%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM----------- 49
MY FG+V AR +FD D++S+N+MI G+ +NG A +FD M
Sbjct: 161 MYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHAT 220
Query: 50 -----PV----------RDVWNW-------------NCMIAGYVAVGDLEAANELFERMP 81
PV R+V N ++ Y+ G ++ A +F+RM
Sbjct: 221 IVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME 280
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR--------------------------- 114
RDV++W CMI+G G+V ALE M
Sbjct: 281 RRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKC 340
Query: 115 ------------NVVSWNSMLALHVRAKSFWECLKMFD---------------------- 140
+++ S+++++ + K C ++F
Sbjct: 341 LHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNEL 400
Query: 141 --------EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
+ M + PN ATL S+L A A L L M +H ++ + +T
Sbjct: 401 VSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATG 460
Query: 193 LLTMYVKCGAMDLARDVF----DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
L+ +Y KCG ++ A +F ++ ++VV W ++I GYG+HG+G AL++F+EM + G
Sbjct: 461 LVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSG 520
Query: 249 PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNS 308
PN+ TF L+AC+H+G+V EG F M Y + HY CIVDLL RAG + +
Sbjct: 521 VTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEA 580
Query: 309 EELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAA 368
LI + + C TH + +LGE+ A +L ELEP + G Y++L+N YAA
Sbjct: 581 YNLITTIPFE-PTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAA 639
Query: 369 QGRWDDVERVRVMIREKGLQKEAASSVVHLE 399
GRW D+E+VR M+ GL+K+ S + +
Sbjct: 640 LGRWKDMEKVRSMMENVGLRKKPGHSTIEIR 670
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 146/291 (50%), Gaps = 24/291 (8%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y++ G ++ AR LF+ L+SYN +I +V+ G A +F M V C+
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGV---KCVP 115
Query: 62 AGYV------AVGDLEAAN-------ELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFF 108
GY A G+L++ + RD N ++ + G V +A + F
Sbjct: 116 DGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVF 175
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP-NEATLVSVLTACAHLGK 167
+ M R+V+SWN+M++ + R + L MFD M+ E+V + AT+VS+L C HL
Sbjct: 176 DVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVN--ESVDLDHATIVSMLPVCGHLKD 233
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L +G VH ++ + + + L+ MY+KCG MD AR VFD M R+V++W MI G
Sbjct: 234 LEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMING 293
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHA-----GMVMEGW 273
Y G+ E ALEL M+ +G +PN T ++S C A G + GW
Sbjct: 294 YTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGW 344
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 198/347 (57%), Gaps = 5/347 (1%)
Query: 54 VWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
V+ ++ Y+ G++ A+++F+ MP+R+ V+WN MI G +G+ AL F +MP
Sbjct: 158 VYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPN 217
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
R VVSW +++ + R E + +F M+ PNE T++++L A +LG L +
Sbjct: 218 RTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGS 277
Query: 174 VHSFI-KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP--VRNVVSWNSMIMGYGL 230
VH+++ K + D+ ++ L+ Y KCG + A F E+P +N+VSW +MI + +
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW-YFDLMRRVYNIEPKV 289
HG G++A+ +F +ME+ G KPN T + VL+AC+H G+ E + +F+ M Y I P V
Sbjct: 338 HGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDV 397
Query: 290 EHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
+HYGC+VD+L R G ++ +E++ + ++ C+ + D+EL E V ++L+
Sbjct: 398 KHYGCLVDMLRRKGRLEEAEKIALEIPIE-EKAVVWRMLLGACSVYDDAELAERVTRKLM 456
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
ELE G Y+++SN + GR+ D +R R + +G+ K S V
Sbjct: 457 ELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 121/286 (42%), Gaps = 53/286 (18%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY V G + DA +FD + V++N MI G G+ A ++MP R V +W +
Sbjct: 167 MYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTI 226
Query: 61 IAGYVAVGDLEAANELFERM-------PDR------------------------------ 83
I GY V + A LF RM P+
Sbjct: 227 IDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRG 286
Query: 84 ----DVVSWNCMIDGCVRVGNVPLALEFFNRMP--ARNVVSWNSML---ALHVRAKSFWE 134
D+ N +ID + G + A +FF +P +N+VSW +M+ A+H K E
Sbjct: 287 FVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGK---E 343
Query: 135 CLKMFDEMMESGEAVPNEATLVSVLTACAH--LGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
+ MF +M G PN T++SVL AC+H L + + ++ + I DV C
Sbjct: 344 AVSMFKDMERLGLK-PNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGC 402
Query: 193 LLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMIMGYGLHGNGEKA 237
L+ M + G ++ A + E+P+ V W ++ ++ + E A
Sbjct: 403 LVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELA 448
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 179/300 (59%), Gaps = 4/300 (1%)
Query: 97 RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLV 156
+ G A + F+ P R + SWN+++ A E ++MF +M SG P++ T+V
Sbjct: 164 KAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE-PDDFTMV 222
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNI--KVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
SV +C LG LS+ +H + K D+++ L+ MY KCG MDLA +F+EM
Sbjct: 223 SVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMR 282
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
RNVVSW+SMI+GY +GN +ALE F +M + G +PN TFV VLSAC H G+V EG
Sbjct: 283 QRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKT 342
Query: 275 YFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTT 334
YF +M+ + +EP + HYGCIVDLL+R G +K ++++++ + +K C
Sbjct: 343 YFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMK-PNVMVWGCLMGGCEK 401
Query: 335 HMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
D E+ E VA ++ELEP + G Y++L+N YA +G W DVERVR +++ K + K A S
Sbjct: 402 FGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 120/249 (48%), Gaps = 13/249 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+Y G +AR +FD + L S+N++I G G A ++F +M D +
Sbjct: 161 LYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFT 220
Query: 57 WNCMIAGYVAVGDLEAANELFERM------PDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+ A +GDL A +L + + D++ N +ID + G + LA F
Sbjct: 221 MVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEE 280
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
M RNVVSW+SM+ + + E L+ F +M E G PN+ T V VL+AC H G +
Sbjct: 281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFG-VRPNKITFVGVLSACVHGGLVEE 339
Query: 171 GMWVHSFIKSN-NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGY 228
G + +KS ++ + C++ + + G + A+ V +EMP++ NV+ W ++ G
Sbjct: 340 GKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGC 399
Query: 229 GLHGNGEKA 237
G+ E A
Sbjct: 400 EKFGDVEMA 408
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
WN+++ ++R +S + ++++ M+ S +P+ +L V+ A + ++G +HS
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRS-TVLPDRYSLPIVIKAAVQIHDFTLGKELHSVA 143
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
D + +T+Y K G + AR VFDE P R + SWN++I G G +A+
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACTHAG 267
E+F++M++ G +P+D T V V ++C G
Sbjct: 204 EMFVDMKRSGLEPDDFTMVSVTASCGGLG 232
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D++ NS+ID + K G A +F+EM R+V +W+ MI GY A G+ A E F +M
Sbjct: 254 DIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMR 313
Query: 82 DRDV----VSWNCMIDGCVRVGNVPLALEFFNRMPAR-----NVVSWNSMLALHVRAKSF 132
+ V +++ ++ CV G V +F M + + + ++ L R
Sbjct: 314 EFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQL 373
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
E K+ +EM PN ++ C G + + WV ++
Sbjct: 374 KEAKKVVEEM----PMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYM 415
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 222/427 (51%), Gaps = 12/427 (2%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM----PVRDVWNWNCMIAGYVAVGD 69
LF D++S++++I +V+NG A +F++M +V C++ A D
Sbjct: 220 LFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 279
Query: 70 LEAANELFE----RMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLAL 125
LE + E + + +V ++D ++ + A F+R+P ++VVSW ++++
Sbjct: 280 LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISG 339
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV 185
++ F M+ P+ +V VL +C+ LG L HS++
Sbjct: 340 FTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS 399
Query: 186 DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEME 245
+ + L+ +Y +CG++ A VF+ + +++ V W S+I GYG+HG G KALE F M
Sbjct: 400 NPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMV 459
Query: 246 KKGP-KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
K KPN+ TF+ +LSAC+HAG++ EG F LM Y + P +EHY +VDLL R G
Sbjct: 460 KSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGD 519
Query: 305 VKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSN 364
+ + E+ K + C H + E+ E VAK+L ELE G Y+++SN
Sbjct: 520 LDTAIEITKRMPFS-PTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSN 578
Query: 365 TYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVH-RKRIMYSMLS 423
Y +G W++VE++R ++++G++K A S++ + + FV + +H K +Y +L
Sbjct: 579 VYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRR-KVHRFVADDELHPEKEPVYGLLK 637
Query: 424 ELGAHIK 430
EL H+K
Sbjct: 638 ELDLHMK 644
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 136/297 (45%), Gaps = 41/297 (13%)
Query: 42 ARKLFDEMPVRDVWNWNCMI--------------------------------AGYVAVGD 69
AR++F EM R ++ WN ++ A G+
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 70 LEAAN--ELFERMPDRDVVSWNCMIDGC------VRVGNVPLALEFFNRMPARNVVSWNS 121
L N E+ +DV + + G ++ G + AL F+ + ++V+W+S
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
M++ + S ++ ++ F M+ + + P+ TL+++++AC L +G VH F+
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
D+ L LL Y K A A ++F + ++V+SW+++I Y +G +AL +F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 242 LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDL 298
+M G +PN AT +CVL AC A + +G +L R +E +V+ +VD+
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIR-KGLETEVKVSTALVDM 308
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 218 bits (555), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 229/439 (52%), Gaps = 12/439 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM--------PVR 52
+YS G DA L+F S D+V++ S+I G KNG+ A K+F +M P
Sbjct: 417 LYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDS 476
Query: 53 DVW-NWNCMIAGYVAVG-DLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
D+ + AG A+ L+ + + +V + +ID + G +AL+ F
Sbjct: 477 DIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTS 536
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
M N+V+WNSM++ + R + +F+ M+ G P+ ++ SVL A + L
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG-IFPDSVSITSVLVAISSTASLLK 595
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G +H + I D L L+ MYVKCG A ++F +M +++++WN MI GYG
Sbjct: 596 GKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGS 655
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
HG+ AL LF EM+K G P+D TF+ ++SAC H+G V EG F+ M++ Y IEP +E
Sbjct: 656 HGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNME 715
Query: 291 HYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIE 350
HY +VDLL RAGL++ + IK + ++ TH + ELG + A++L+
Sbjct: 716 HYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSAS-RTHHNVELGILSAEKLLR 774
Query: 351 LEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNY 410
+EP Y+ L N Y G ++ ++ +++EKGL K+ S + + D + +F
Sbjct: 775 MEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGS 834
Query: 411 SVHRKRIMYSMLSELGAHI 429
S K ++++L+ L +++
Sbjct: 835 SSPMKAEIFNVLNRLKSNM 853
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 43/293 (14%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR-DVWNWNCMIAGYVAVGDLE 71
+ +SL D ++ID + K G + A ++F E+ + +V WN MI G+ G E
Sbjct: 195 FMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICE 254
Query: 72 AA------------------------------NELFERMPDRDVVSWNCMIDGCV----- 96
++ N F R DVV D V
Sbjct: 255 SSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLL 314
Query: 97 ----RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNE 152
+ G V A F+ + + + WN+M+A + + L +F M +P+
Sbjct: 315 SMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG-FMRQKSVLPDS 373
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
TL +V++ C+ LG + G VH+ + I+ + + LLT+Y KCG A VF
Sbjct: 374 FTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKS 433
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALELFLEM--EKKGPKPNDATFVCVLSAC 263
M +++V+W S+I G +G ++AL++F +M + KP+ V +AC
Sbjct: 434 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNAC 486
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 11/181 (6%)
Query: 96 VRVGNVPLALEFFNR-------MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
V+ G + A++ F+ + AR+V WNSM+ + + + F E + F M+ G
Sbjct: 106 VKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG-V 164
Query: 149 VPNEATLVSVLTACAHLGKL--SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
P+ +L V++ G G +H F+ N++ D L T L+ MY K G A
Sbjct: 165 RPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDA 224
Query: 207 RDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH 265
VF E+ + NVV WN MI+G+G G E +L+L++ + K +F L AC+
Sbjct: 225 WRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQ 284
Query: 266 A 266
+
Sbjct: 285 S 285
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 113/296 (38%), Gaps = 52/296 (17%)
Query: 27 NSMIDGHVKNGETGAARKLFDE-------MPVRDVWNWNCMIAGYVAVGDLEAANELFER 79
S+++ +VK G A ++FD + RDV WN MI GY + F R
Sbjct: 99 TSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRR 158
Query: 80 M------PD----RDVVSWNCM----------------------IDGCVRVGNVPLALEF 107
M PD VVS C D ++ + + +F
Sbjct: 159 MLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKF 218
Query: 108 FNRMPA----------RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT-LV 156
+ A NVV WN M+ + L ++ M+ +V +T
Sbjct: 219 GLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY--MLAKNNSVKLVSTSFT 276
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
L AC+ G +H + + D + T LL+MY KCG + A VF + +
Sbjct: 277 GALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDK 336
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ WN+M+ Y + G AL+LF M +K P+ T V+S C+ G+ G
Sbjct: 337 RLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYG 392
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 7/157 (4%)
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
S NS + ++ + + L ++ + S + T S+L AC+ L LS G +H
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFD-------EMPVRNVVSWNSMIMGYGL 230
+ + D ++T L+ MYVKCG +D A VFD + R+V WNSMI GY
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
++ + F M G +P+ + V+S G
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEG 182
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 229/438 (52%), Gaps = 11/438 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y G++ +A +LF D++ + +M+ G + G++ A + + EM +
Sbjct: 160 LYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVV 219
Query: 61 IAGYV-AVGDL-------EAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ G + A GDL L+ +VV ++D +VG + +A F+RM
Sbjct: 220 MLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMM 279
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+ VSW S+++ + + + EM G P+ TLV VL AC+ +G L G
Sbjct: 280 FKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQ-PDLVTLVGVLVACSQVGSLKTGR 338
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
VH +I ++ +D + +T L+ MY KCGA+ +R++F+ + +++V WN+MI YG+HG
Sbjct: 339 LVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHG 397
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
NG++ + LFL+M + +P+ ATF +LSA +H+G+V +G +F +M Y I+P +HY
Sbjct: 398 NGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHY 457
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
C++DLLARAG V+ + ++I + C H + +G+I A ++++L
Sbjct: 458 VCLIDLLARAGRVEEALDMINSEKLD-NALPIWVALLSGCINHRNLSVGDIAANKILQLN 516
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSV 412
P IG ++SN +A +W +V +VR ++R ++K S + + + +++ S
Sbjct: 517 PDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSH 576
Query: 413 HRKRIMYSMLSELGAHIK 430
H M +L L I+
Sbjct: 577 HEHYHMLQVLRNLKTEIR 594
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 151/324 (46%), Gaps = 15/324 (4%)
Query: 5 FGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCM 60
G +S AR +FD + YNSMI + + +L+D+M D +
Sbjct: 63 IGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMT 122
Query: 61 IAGYVAVGDLEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV 116
I ++ LE ++ + D DV + +++ ++ G + A F +M R+V
Sbjct: 123 IKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDV 182
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
+ W +M+ +A + ++ + EM G + ++ +L A LG +G VH
Sbjct: 183 ICWTTMVTGFAQAGKSLKAVEFYREMQNEGFG-RDRVVMLGLLQASGDLGDTKMGRSVHG 241
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
++ + ++V++ T L+ MY K G +++A VF M + VSW S+I G+ +G K
Sbjct: 242 YLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANK 301
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWY--FDLMRRVYNIEPKVEHYGC 294
A E +EM+ G +P+ T V VL AC+ G + G + L R V +
Sbjct: 302 AFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTAT----A 357
Query: 295 IVDLLARAGLVKNSEELIKYVSVK 318
++D+ ++ G + +S E+ ++V K
Sbjct: 358 LMDMYSKCGALSSSREIFEHVGRK 381
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 12/221 (5%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
+I C R+G + A + F+ +P R V +NSM+ ++ R K+ E L+++D+M+ + P
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAE-KIQP 114
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
+ +T + AC L G V K DV + + +L +Y+KCG MD A +F
Sbjct: 115 DSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF 174
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC-----TH 265
+M R+V+ W +M+ G+ G KA+E + EM+ +G + + +L A T
Sbjct: 175 GKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTK 234
Query: 266 AGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVK 306
G + G+ Y + +E +VD+ A+ G ++
Sbjct: 235 MGRSVHGYLYRTGLPMNVVVETS------LVDMYAKVGFIE 269
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 174 VHSF-IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H+F I + N+ +S L+ + G + AR VFDE+P R V +NSMI+ Y
Sbjct: 36 IHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGK 95
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
N ++ L L+ +M + +P+ +TF + AC +G+V+E
Sbjct: 96 NPDEVLRLYDQMIAEKIQPDSSTFTMTIKACL-SGLVLE 133
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 215/417 (51%), Gaps = 42/417 (10%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR-DVWNWNCMIAGYVAVGDLEAANELF 77
+LD NS++ + K A KLF + + WN M+ GY + ELF
Sbjct: 362 FSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELF 421
Query: 78 ERMPDR----DVVSWNCMIDGCVRVGNVPLA----------------------LEFFNRM 111
++ + D S +I C +G V L ++ + +M
Sbjct: 422 RKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKM 481
Query: 112 ------------PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
NV++WN+M+A +V + + + +FD M+ S P+ TLV++L
Sbjct: 482 GDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMV-SENFKPSSITLVTLL 540
Query: 160 TACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVV 219
AC + G L G +H +I ++++ LS L+ MY KCG ++ +R++FD ++ V
Sbjct: 541 MACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAV 600
Query: 220 SWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM 279
WN MI GYG+HG+ E A+ LF +ME+ KP TF+ +LSACTHAG+V +G F M
Sbjct: 601 CWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM 660
Query: 280 RRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSE 339
+ Y+++P ++HY C+VDLL+R+G ++ +E + + C TH + E
Sbjct: 661 HQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFS-PDGVIWGTLLSSCMTHGEFE 718
Query: 340 LGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
+G +A+R + +P + G YIML+N Y+A G+W++ ER R M+RE G+ K A SVV
Sbjct: 719 MGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 89/186 (47%), Gaps = 5/186 (2%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
+I G L+ F+ + R++ WNS++ H + L F M+ SG++ P
Sbjct: 65 LISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQS-P 123
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFI-KSNNIKVDVLLSTCLLTMYVKCGAMDLARDV 209
+ T V++ACA L VG +VH + K + + + Y KCG + A V
Sbjct: 124 DHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLV 183
Query: 210 FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP---KPNDATFVCVLSACTHA 266
FDEMP R+VV+W ++I G+ +G E L +M G KPN T C AC++
Sbjct: 184 FDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNL 243
Query: 267 GMVMEG 272
G + EG
Sbjct: 244 GALKEG 249
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 127/284 (44%), Gaps = 13/284 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGET----GAARKLFDEMPVRDVWN 56
YS G + DA L+FD D+V++ ++I GHV+NGE+ G K+ D N
Sbjct: 170 FYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPN 229
Query: 57 WNCMIAGYVAVGDLEAANE---LFERMPDRDVVS----WNCMIDGCVRVGNVPLALEFFN 109
+ G+ A +L A E L + S + M + GN A F
Sbjct: 230 PRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFR 289
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
+ ++ SW S++A R+ E MF EM G P+ + ++ + +
Sbjct: 290 ELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMH-PDGVVISCLINELGKMMLVP 348
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGY 228
G H F+ + +D + LL+MY K + +A +F + N +WN+M+ GY
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 408
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
G K +ELF +++ G + + A+ V+S+C+H G V+ G
Sbjct: 409 GKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLG 452
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 129/289 (44%), Gaps = 12/289 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWN-- 58
+Y G ++ A +F + T +++++N+MI +V ++ A LFD M + +
Sbjct: 477 LYGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSIT 535
Query: 59 --CMIAGYVAVGDLEAANELF----ERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ V G LE + E + ++ +ID + G++ + E F+
Sbjct: 536 LVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN 595
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
++ V WN M++ + + +FD+M ES + P T +++L+AC H G + G
Sbjct: 596 QKDAVCWNVMISGYGMHGDVESAIALFDQMEES-DVKPTGPTFLALLSACTHAGLVEQGK 654
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLH 231
+ + ++K ++ +CL+ + + G ++ A MP + V W +++ H
Sbjct: 655 KLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTH 714
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
G E + + P+ ND ++ + + + AG E ++MR
Sbjct: 715 GEFEMGIRMAERAVASDPQ-NDGYYIMLANMYSAAGKWEEAERAREMMR 762
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/462 (28%), Positives = 224/462 (48%), Gaps = 73/462 (15%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR--------------- 52
+ +A +LF+ DLV++N+M+ G+ ++ + KLF M +
Sbjct: 468 MKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKT 526
Query: 53 ------------------------DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSW 88
D+W + ++ YV GD+ AA F+ +P D V+W
Sbjct: 527 CGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAW 586
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
MI GC+ G A F++M V+
Sbjct: 587 TTMISGCIENGEEERAFHVFSQMRLMGVL------------------------------- 615
Query: 149 VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
P+E T+ ++ A + L L G +H+ N D + T L+ MY KCG++D A
Sbjct: 616 -PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYC 674
Query: 209 VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGM 268
+F + + N+ +WN+M++G HG G++ L+LF +M+ G KP+ TF+ VLSAC+H+G+
Sbjct: 675 LFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGL 734
Query: 269 VMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXX 328
V E + + M Y I+P++EHY C+ D L RAGLVK +E LI+ +S++
Sbjct: 735 VSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSME-ASASMYRTL 793
Query: 329 XXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQ 388
C D+E G+ VA +L+ELEP+D Y++LSN YAA +WD+++ R M++ ++
Sbjct: 794 LAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVK 853
Query: 389 KEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
K+ S + +++ + V + S + ++Y + ++ IK
Sbjct: 854 KDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIK 895
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 8/244 (3%)
Query: 28 SMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------P 81
++++ ++K G+ + LF+EMP RDV WN M+ Y+ +G E A +L P
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 82 DRDVVSWNCMIDGC-VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
+ + I G G V + ++ N L+ ++ + + LK F
Sbjct: 245 NEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFA 304
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
+M+ES + ++ T + +L + L++G VH + + + +S L+ MY K
Sbjct: 305 DMVES-DVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKL 363
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
AR VFD M R+++SWNS+I G +G +A+ LF+++ + G KP+ T VL
Sbjct: 364 RKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVL 423
Query: 261 SACT 264
A +
Sbjct: 424 KAAS 427
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 8/185 (4%)
Query: 77 FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRA-----KS 131
FE P+R ++ N +I + G++ A F++MP R++VSWNS+LA + ++ ++
Sbjct: 68 FEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVEN 125
Query: 132 FWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLST 191
+ +F ++ + TL +L C H G + H + + D ++
Sbjct: 126 IQQAFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAG 184
Query: 192 CLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKP 251
L+ +Y+K G + + +F+EMP R+VV WN M+ Y G E+A++L G P
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 252 NDATF 256
N+ T
Sbjct: 245 NEITL 249
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 122/275 (44%), Gaps = 21/275 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY G +S A+ FDS D V++ +MI G ++NGE A +F +M + V
Sbjct: 561 MYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT 620
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSWNC---------MIDGCVRVGNVPLALEFFNRM 111
IA A E R + + NC ++D + G++ A F R+
Sbjct: 621 IATLAKASSCLTALEQ-GRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRI 679
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
N+ +WN+ML + E L++F +M G P++ T + VL+AC+H G +S
Sbjct: 680 EMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLG-IKPDKVTFIGVLSACSHSGLVSEA 738
Query: 172 M-WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS-WNSMIMGYG 229
+ S IK ++ +CL + G + A ++ + M + S + +++
Sbjct: 739 YKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACR 798
Query: 230 LHGN---GEKALELFLEMEKKGPKPNDATFVCVLS 261
+ G+ G++ LE+E P D++ +LS
Sbjct: 799 VQGDTETGKRVATKLLELE-----PLDSSAYVLLS 828
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L +G H+ I + + L L++MY KCG++ AR VFD+MP R++VSWNS++
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 228 YGLHG-----NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
Y N ++A LF + + + T +L C H+G V
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 230/471 (48%), Gaps = 42/471 (8%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MYS G A ++ + +S N +I+G+V+ G+ ARK+FDEMP R + WN M
Sbjct: 3 MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 62
Query: 61 IAGYVAVGDLEAANELFERM------PDR------------------------------- 83
IAG + E LF M PD
Sbjct: 63 IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 122
Query: 84 --DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D+V + + +R G + MP RN+V+WN+++ + + L ++
Sbjct: 123 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 182
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M SG PN+ T V+VL++C+ L G +H+ V + + L++MY KCG
Sbjct: 183 MKISG-CRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCG 241
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM-EKKGPKPNDATFVCVL 260
+ A F E + V W+SMI YG HG G++A+ELF M E+ + N+ F+ +L
Sbjct: 242 CLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLL 301
Query: 261 SACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXX 320
AC+H+G+ +G FD+M Y +P ++HY C+VDLL RAG + +E +I+ + +K
Sbjct: 302 YACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTD 361
Query: 321 XXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRV 380
C H ++E+ + V K +++++P D Y++L+N +A+ RW DV VR
Sbjct: 362 IVIWKTLLSA-CNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRK 420
Query: 381 MIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKL 431
+R+K ++KEA S + ++ + + S + + +YS L EL +KL
Sbjct: 421 SMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKL 471
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 235/439 (53%), Gaps = 10/439 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFD---EMPVR-DVWN 56
+YS GR++DA LFD +V++ ++ G+ +G A LF EM V+ D +
Sbjct: 155 IYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYF 214
Query: 57 WNCMIAGYVAVGDLEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+++ V VGDL++ + + M + ++ +++ + G + A F+ M
Sbjct: 215 IVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMV 274
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+++V+W++M+ + E +++F +M++ P++ ++V L++CA LG L +G
Sbjct: 275 EKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLK-PDQFSIVGFLSSCASLGALDLGE 333
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
W S I + ++ ++ L+ MY KCGAM +VF EM +++V N+ I G +G
Sbjct: 334 WGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNG 393
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
+ + + +F + EK G P+ +TF+ +L C HAG++ +G +F+ + VY ++ VEHY
Sbjct: 394 HVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHY 453
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
GC+VDL RAG++ ++ LI + ++ C D++L E V K LI LE
Sbjct: 454 GCMVDLWGRAGMLDDAYRLICDMPMR-PNAIVWGALLSGCRLVKDTQLAETVLKELIALE 512
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSV 412
P + G Y+ LSN Y+ GRWD+ VR M+ +KG++K S + LE ++ + S
Sbjct: 513 PWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSH 572
Query: 413 HRKRIMYSMLSELGAHIKL 431
+Y+ L +LG ++L
Sbjct: 573 PLSDKIYAKLEDLGNEMRL 591
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 156/322 (48%), Gaps = 20/322 (6%)
Query: 5 FGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGY 64
F + + LLF + ++ YNS+I+G V N LF + ++ + G+
Sbjct: 58 FRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLY-----LHGF 112
Query: 65 VAVGDLEAANELFERMP-------------DRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
L+A R + DV + ++ G + A + F+ +
Sbjct: 113 TFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI 172
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
P R+VV+W ++ + + + E + +F +M+E G P+ +V VL+AC H+G L G
Sbjct: 173 PDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMG-VKPDSYFIVQVLSACVHVGDLDSG 231
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
W+ +++ ++ + + T L+ +Y KCG M+ AR VFD M +++V+W++MI GY +
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN 291
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
++ +ELFL+M ++ KP+ + V LS+C G + G W L+ R + +
Sbjct: 292 SFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFM 350
Query: 292 YGCIVDLLARAGLVKNSEELIK 313
++D+ A+ G + E+ K
Sbjct: 351 ANALIDMYAKCGAMARGFEVFK 372
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 216/399 (54%), Gaps = 22/399 (5%)
Query: 11 ARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDL 70
AR +FD + V++++MI G+V+N A ++F +M V D N + VA+G +
Sbjct: 259 ARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND----NVAMVTPVAIGLI 314
Query: 71 EAANELFERMPDR--------------DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV 116
F + D+ N +I + G++ A F+ + ++V
Sbjct: 315 LMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDV 374
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
+S+NS++ V E ++F EM SG P+ TL+ VLTAC+HL L G H
Sbjct: 375 ISYNSLITGCVVNCRPEESFRLFHEMRTSG-IRPDITTLLGVLTACSHLAALGHGSSCHG 433
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
+ + V+ + L+ MY KCG +D+A+ VFD M R++VSWN+M+ G+G+HG G++
Sbjct: 434 YCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKE 493
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV-YNIEPKVEHYGCI 295
AL LF M++ G P++ T + +LSAC+H+G+V EG F+ M R +N+ P+++HY C+
Sbjct: 494 ALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCM 553
Query: 296 VDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMD 355
DLLARAG + + + + + + C T+ ++ELG V+K++ L
Sbjct: 554 TDLLARAGYLDEAYDFVNKMPFE-PDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGET- 611
Query: 356 IGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
++LSNTY+A RW+D R+R++ +++GL K S
Sbjct: 612 TESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYS 650
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 4/175 (2%)
Query: 101 VPLALEFFNRMPAR--NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
V LA F+ +P N ++W+ M+ + + L ++ +M+ SG P + T V
Sbjct: 51 VELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSG-VRPTKYTYPFV 109
Query: 159 LTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
L ACA L + G +HS + ++ D+ + T L+ Y KCG +++A VFDEMP R++
Sbjct: 110 LKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDM 169
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEK-KGPKPNDATFVCVLSACTHAGMVMEG 272
V+WN+MI G+ LH + LFL+M + G PN +T V + A AG + EG
Sbjct: 170 VAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 132/282 (46%), Gaps = 10/282 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW--NWN 58
Y+ G + A +FD D+V++N+MI G + LF +M D N +
Sbjct: 147 FYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLS 206
Query: 59 CMIAGYVAVGDLEAANE------LFERMP-DRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
++ + A+G A E RM D+V ++D + + A F+
Sbjct: 207 TIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLD 266
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMM-ESGEAVPNEATLVSVLTACAHLGKLSV 170
+N V+W++M+ +V + E ++F +M+ A+ + +L CA G LS
Sbjct: 267 FKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSG 326
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G VH + +D+ + +++ Y K G++ A F E+ +++V+S+NS+I G +
Sbjct: 327 GRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVV 386
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ E++ LF EM G +P+ T + VL+AC+H + G
Sbjct: 387 NCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHG 428
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 123/286 (43%), Gaps = 49/286 (17%)
Query: 4 VFGRVSDARLLFDSSLTLD----LVSYNSMIDGHVKNGETGAARKLFDEMPVRDV--WNW 57
V G+V LL SLTL LV+ + + E AR +FDE+P + W
Sbjct: 16 VLGQVIHQHLL-KRSLTLSSSTVLVNLTRL---YASCNEVELARHVFDEIPHPRINPIAW 71
Query: 58 NCMIAGYVAVGDLEAANELFERM------PDR---------------------------- 83
+ MI Y + E A +L+ +M P +
Sbjct: 72 DLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNC 131
Query: 84 -----DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKM 138
D+ ++D + G + +A++ F+ MP R++V+WN+M++ + + +
Sbjct: 132 SDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGL 191
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
F +M PN +T+V + A G L G VH + D+++ T +L +Y
Sbjct: 192 FLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYA 251
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
K + AR VFD +N V+W++MI GY + ++A E+F +M
Sbjct: 252 KSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM 297
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVD---VLLSTCLLTMYVKCGAMDLARDVFD 211
+S+L C L +G +H + ++ + VL++ L +Y C ++LAR VFD
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN--LTRLYASCNEVELARHVFD 59
Query: 212 EMPVR--NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
E+P N ++W+ MI Y + EKAL+L+ +M G +P T+ VL AC +
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 270 MEG 272
+G
Sbjct: 120 DDG 122
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/429 (31%), Positives = 220/429 (51%), Gaps = 51/429 (11%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
LF L D+ +S+I + K G+ G ARKLFDE+ RD +WN MI+GY G + A
Sbjct: 158 LFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDA 217
Query: 74 NELFERM------PD-RDVVSWNCMIDGCVRVGNVPL----------------------- 103
+LF +M PD R +VS M+ C +G++
Sbjct: 218 MDLFRKMEEEGFEPDERTLVS---MLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKL 274
Query: 104 ------------ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPN 151
A FN+M ++ V+W +M+ ++ + E K+F EM ++G P+
Sbjct: 275 ISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG-VSPD 333
Query: 152 EATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFD 211
TL +VL+AC +G L +G + + +++ ++ ++T L+ MY KCG ++ A VF+
Sbjct: 334 AGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFE 393
Query: 212 EMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
MPV+N +WN+MI Y G+ ++AL LF ++ P+D TF+ VLSAC HAG+V +
Sbjct: 394 AMPVKNEATWNAMITAYAHQGHAKEALLLF---DRMSVPPSDITFIGVLSACVHAGLVHQ 450
Query: 272 GWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXX 331
G YF M ++ + PK+EHY I+DLL+RAG++ + E ++ K
Sbjct: 451 GCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK-PDEIMLAAILGA 509
Query: 332 CTTHMDSELGEIVAKRLIEL-EPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKE 390
C D + E + L+E+ E + G Y++ SN A WD+ ++R ++R++G+ K
Sbjct: 510 CHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKT 569
Query: 391 AASSVVHLE 399
S + +E
Sbjct: 570 PGCSWIEIE 578
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 159/326 (48%), Gaps = 17/326 (5%)
Query: 5 FGRVSDARLLFDSSLTLDLVSYNSMIDGHVKN-GETGAARKLFDEMPVR----DVWNWNC 59
G + + LF + + S+N MI G + AA L+ M D + +N
Sbjct: 78 LGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNF 137
Query: 60 MIAGYVAVGDLE-------AANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ ++A LE + LF+ +RDV + +I + G V A + F+ +
Sbjct: 138 V---FIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEIT 194
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R+ VSWNSM++ + A + + +F +M E G P+E TLVS+L AC+HLG L G
Sbjct: 195 ERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEG-FEPDERTLVSMLGACSHLGDLRTGR 253
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+ + I + L + L++MY KCG +D AR VF++M ++ V+W +MI Y +G
Sbjct: 254 LLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNG 313
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
+A +LF EMEK G P+ T VLSAC G +E + +++ +
Sbjct: 314 KSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG-ALELGKQIETHASELSLQHNIYVA 372
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVK 318
+VD+ + G V+ + + + + VK
Sbjct: 373 TGLVDMYGKCGRVEEALRVFEAMPVK 398
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 113/230 (49%), Gaps = 31/230 (13%)
Query: 43 RKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVP 102
R++ +M + V N +I V +GD ++ LF + + S+N MI G
Sbjct: 54 RQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTN----- 108
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
+WN A L ++ M SG P++ T V AC
Sbjct: 109 ---------------TWNDHEA----------ALSLYRRMKFSG-LKPDKFTYNFVFIAC 142
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
A L ++ VG VHS + ++ DV ++ L+ MY KCG + AR +FDE+ R+ VSWN
Sbjct: 143 AKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWN 202
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
SMI GY G + A++LF +ME++G +P++ T V +L AC+H G + G
Sbjct: 203 SMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTG 252
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 233/444 (52%), Gaps = 20/444 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNG---ETGAARKLFDEMPVR----D 53
MY+ ++DAR +FD D+V +N+MI+G+ + G E A +F +M R
Sbjct: 394 MYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPS 453
Query: 54 VWNWNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMID---GCVRVGNVPLALE 106
+ + ++ ++ L + ++ F+ + D+ + + +ID C + + L
Sbjct: 454 LLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLV-- 511
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F+ M +++V WNSM A +V+ E L +F E+ S E P+E T +++TA +L
Sbjct: 512 -FDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRER-PDEFTFANMVTAAGNLA 569
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
+ +G H + ++ + ++ LL MY KCG+ + A FD R+VV WNS+I
Sbjct: 570 SVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVIS 629
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
Y HG G+KAL++ +M +G +PN TFV VLSAC+HAG+V +G F+LM R + IE
Sbjct: 630 SYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIE 688
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAK 346
P+ EHY C+V LL RAG + + ELI+ + K C + EL E A+
Sbjct: 689 PETEHYVCMVSLLGRAGRLNKARELIEKMPTK-PAAIVWRSLLSGCAKAGNVELAEHAAE 747
Query: 347 RLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYF 406
I +P D G + MLSN YA++G W + ++VR ++ +G+ KE S + + +
Sbjct: 748 MAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFL 807
Query: 407 VKNYSVHRKRIMYSMLSELGAHIK 430
K+ S + +Y +L +L I+
Sbjct: 808 SKDKSHCKANQIYEVLDDLLVQIR 831
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 153/335 (45%), Gaps = 53/335 (15%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L S D+ +ID ++K+G AR +FD +P + W MI+G V +G
Sbjct: 173 FLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYV 232
Query: 73 ANELFERM------PDRDVVS---------------------------------WNCMID 93
+ +LF ++ PD ++S N +ID
Sbjct: 233 SLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLID 292
Query: 94 GCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA 153
V+ G V A + FN MP +N++SW ++L+ + + E +++F M + G P+
Sbjct: 293 SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK-PDMY 351
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM 213
S+LT+CA L L G VH++ N+ D ++ L+ MY KC + AR VFD
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411
Query: 214 PVRNVVSWNSMIMGYGLHGNG---EKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVM 270
+VV +N+MI GY G +AL +F +M + +P+ TFV +L A A +
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRAS--ASLTS 469
Query: 271 EGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
G L ++++ + K YG +D+ A + L+
Sbjct: 470 LG-----LSKQIHGLMFK---YGLNLDIFAGSALI 496
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 149/310 (48%), Gaps = 15/310 (4%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWNWNCMI 61
GRV A LF+ +++S+ +++ G+ +N A +LF M D++ + ++
Sbjct: 298 GRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSIL 357
Query: 62 AGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
++ L ++ + D N +ID + + A + F+ A +VV
Sbjct: 358 TSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVV 417
Query: 118 SWNSMLALHVRAKSFW---ECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV 174
+N+M+ + R + W E L +F + M P+ T VS+L A A L L + +
Sbjct: 418 LFNAMIEGYSRLGTQWELHEALNIFRD-MRFRLIRPSLLTFVSLLRASASLTSLGLSKQI 476
Query: 175 HSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNG 234
H + + +D+ + L+ +Y C + +R VFDEM V+++V WNSM GY
Sbjct: 477 HGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSEN 536
Query: 235 EKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGW-WYFDLMRRVYNIEPKVEHYG 293
E+AL LFLE++ +P++ TF +++A + V G ++ L++R P + +
Sbjct: 537 EEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN-- 594
Query: 294 CIVDLLARAG 303
++D+ A+ G
Sbjct: 595 ALLDMYAKCG 604
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 94/180 (52%), Gaps = 6/180 (3%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
N +I+ R G + A + F +MP RN+VSW++M++ + E L +F E + +
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD 142
Query: 149 VPNEATLVSVLTACAHLGKLSVGMW----VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
PNE L S + AC+ L G W + SF+ + DV + T L+ Y+K G +D
Sbjct: 143 SPNEYILSSFIQACSGLD--GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNID 200
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
AR VFD +P ++ V+W +MI G G +L+LF ++ + P+ VLSAC+
Sbjct: 201 YARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACS 260
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 142/450 (31%), Positives = 221/450 (49%), Gaps = 51/450 (11%)
Query: 21 LDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELF--- 77
LD+ S D + K ARKLFDE+P R++ WN I+ V G A E F
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF 200
Query: 78 ---ERMP---------------------------------DRDVVSWNCMIDGCVRVGNV 101
+ P D DV N +ID + +
Sbjct: 201 RRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQI 260
Query: 102 PLALEFFNRMPARNVVSWNSMLALHVR----AKSFWECLKMFDEMMESGEAVPNEATLVS 157
+ F M +N VSW S++A +V+ K+ L+ +++E+ + + + S
Sbjct: 261 RSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFM-----ISS 315
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
VL+ACA + L +G +H+ ++ + + + L+ MY KCG ++ + FDEMP +N
Sbjct: 316 VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 375
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKG--PKPNDATFVCVLSACTHAGMVMEGWWY 275
+V+ NS+I GY G + AL LF EM +G P PN TFV +LSAC+ AG V G
Sbjct: 376 LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 435
Query: 276 FDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTH 335
FD MR Y IEP EHY CIVD+L RAG+V+ + E IK + ++ C H
Sbjct: 436 FDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQ-PTISVWGALQNACRMH 494
Query: 336 MDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSV 395
+LG + A+ L +L+P D G +++LSNT+AA GRW + VR ++ G++K A S
Sbjct: 495 GKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSW 554
Query: 396 VHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
+ +++ + K+ S + + + L++L
Sbjct: 555 ITVKNQVHAFQAKDRSHILNKEIQTTLAKL 584
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
PARNVVSW S+++ + F L F EM G VPN+ T A A L G
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREG-VVPNDFTFPCAFKAVASLRLPVTG 127
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
+H+ +DV + MY K D AR +FDE+P RN+ +WN+ I
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACT-----HAGMVMEGWWYFDLMRRVYNIE 286
G +A+E F+E + PN TF L+AC+ + GM + G ++R ++ +
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGL----VLRSGFDTD 243
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
V ++D + +++SE + + K
Sbjct: 244 VSV--CNGLIDFYGKCKQIRSSEIIFTEMGTK 273
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 168 LSVGMWVHS-FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
+ +G VH+ +K+ + L+ L+ MY K + AR V P RNVVSW S+I
Sbjct: 22 MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLIS 81
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
G +G+ AL F EM ++G PND TF C A
Sbjct: 82 GLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKA 117
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------PVRDV 54
MY G + D+ FD +LV+ NS+I G+ G+ A LF+EM P +
Sbjct: 354 MYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNY 413
Query: 55 WNWNCMIAGYVAVGDLEAANELFERMP-----DRDVVSWNCMIDGCVRVGNVPLALEFFN 109
+ +++ G +E ++F+ M + ++C++D R G V A EF
Sbjct: 414 MTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIK 473
Query: 110 RMPARNVVS-WNSM 122
+MP + +S W ++
Sbjct: 474 KMPIQPTISVWGAL 487
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 223/433 (51%), Gaps = 12/433 (2%)
Query: 3 SVFGRVSDARLLFDSSLTLDLVS-YNSMIDGHVKNGETGAA-----RKLFDEMPVRDVWN 56
SV G +S A+LLFD + S +N +I G + + R L + D++
Sbjct: 50 SVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFT 109
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRV----GNVPLALEFFNRMP 112
+N + + + E+ + + + VR G+V +A + F+ MP
Sbjct: 110 FNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMP 169
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R++VSWN M+ + L M+ M G + TLV++L++CAH+ L++G+
Sbjct: 170 VRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEG-VCGDSYTLVALLSSCAHVSALNMGV 228
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H + V +S L+ MY KCG+++ A VF+ M R+V++WNSMI+GYG+HG
Sbjct: 229 MLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHG 288
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
+G +A+ F +M G +PN TF+ +L C+H G+V EG +F++M +++ P V+HY
Sbjct: 289 HGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHY 348
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
GC+VDL RAG ++NS E+I Y S C H + ELGE+ K+L++LE
Sbjct: 349 GCMVDLYGRAGQLENSLEMI-YASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLE 407
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSV 412
+ G Y+++++ Y+A +R +IR LQ S + + D K+ V +
Sbjct: 408 AFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMH 467
Query: 413 HRKRIMYSMLSEL 425
++YS L E+
Sbjct: 468 PESAVIYSELGEV 480
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 105/222 (47%), Gaps = 9/222 (4%)
Query: 90 CMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV 149
C + + + L + F+ P+ + WN ++ + S + ++ M+ S +
Sbjct: 47 CAVSVTGSLSHAQLLFDHFDSDPSTS--DWNYLIRGFSNSSSPLNSILFYNRMLLSSVSR 104
Query: 150 PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV 209
P+ T L +C + + + +H + + D +++T L+ Y G++++A V
Sbjct: 105 PDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKV 164
Query: 210 FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
FDEMPVR++VSWN MI + G +AL ++ M +G + T V +LS+C H +
Sbjct: 165 FDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSAL 224
Query: 270 MEGWWYFDLMRRV---YNIEPKVEHYGCIVDLLARAGLVKNS 308
G ++ R+ E V ++D+ A+ G ++N+
Sbjct: 225 NMGV----MLHRIACDIRCESCVFVSNALIDMYAKCGSLENA 262
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 211 bits (536), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 233/467 (49%), Gaps = 46/467 (9%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGY-----------VAV 67
+ L++ N+++ + + G RK+F MP D +WN +I V
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF 505
Query: 68 GDLEAANELFERMP-----------------------------DRDVVSWNCMIDGCVRV 98
+ + A + R+ + + N +I +
Sbjct: 506 LNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKC 565
Query: 99 GNVPLALEFFNRMPAR-NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
G + + F+RM R + V+WNSM++ ++ + + L + M+++G+ + + +
Sbjct: 566 GEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRL-DSFMYAT 624
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
VL+A A + L GM VH+ ++ DV++ + L+ MY KCG +D A F+ MPVRN
Sbjct: 625 VLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRN 684
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPND-ATFVCVLSACTHAGMVMEGWWYF 276
SWNSMI GY HG GE+AL+LF M+ G P D TFV VLSAC+HAG++ EG+ +F
Sbjct: 685 SYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHF 744
Query: 277 DLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTH- 335
+ M Y + P++EH+ C+ D+L RAG + E+ I+ + +K C +
Sbjct: 745 ESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANG 804
Query: 336 MDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSV 395
+ELG+ A+ L +LEP + Y++L N YAA GRW+D+ + R +++ ++KEA S
Sbjct: 805 RKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSW 864
Query: 396 VHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAGSIEKDNF 442
V ++D + + S ++Y L EL + K+ AG + + F
Sbjct: 865 VTMKDGVHMFVAGDKSHPDADVIYKKLKEL--NRKMRDAGYVPQTGF 909
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 123/277 (44%), Gaps = 49/277 (17%)
Query: 37 GETGAAR----KLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMI 92
G GAAR +L+ +DV+ N +I Y+ GD +A ++F+ MP R+ VSW C++
Sbjct: 15 GHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIV 74
Query: 93 DGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNE 152
G R G AL F M + S N+
Sbjct: 75 SGYSRNGEHKEALVFLRDMVKEGIFS--------------------------------NQ 102
Query: 153 ATLVSVLTACAHLGKLSV--GMWVHSFIKSNNIKVDVLLSTCLLTMYVKC-GAMDLARDV 209
VSVL AC +G + + G +H + + VD ++S L++MY KC G++ A
Sbjct: 103 YAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCA 162
Query: 210 FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATF-VCVLSACTHAGM 268
F ++ V+N VSWNS+I Y G+ A +F M+ G +P + TF V +AC+
Sbjct: 163 FGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTE- 221
Query: 269 VMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
+R + I ++ G + DL +GLV
Sbjct: 222 --------PDVRLLEQIMCTIQKSGLLTDLFVGSGLV 250
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 133/275 (48%), Gaps = 45/275 (16%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGD---- 69
L+ + L D+ N++I+ +++ G++ +ARK+FDEMP+R+ +W C+++GY G+
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEA 86
Query: 70 ----------------------LEAANE------LFERMPDRDVVSWNCMIDGCVR---- 97
L A E LF R + + +D V
Sbjct: 87 LVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLI 146
Query: 98 ------VGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPN 151
+G+V AL F + +N VSWNS+++++ +A ++F M G + P
Sbjct: 147 SMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG-SRPT 205
Query: 152 EATLVSVLTACAHLGKLSVGM--WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV 209
E T S++T L + V + + I+ + + D+ + + L++ + K G++ AR V
Sbjct: 206 EYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKV 265
Query: 210 FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
F++M RN V+ N +++G GE+A +LF++M
Sbjct: 266 FNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 117/244 (47%), Gaps = 20/244 (8%)
Query: 4 VFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKL----FDEMPVRDVWNWNC 59
+F R+++ R D V++NSMI G++ N A L D + +
Sbjct: 574 IFSRMAERR---------DNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYAT 624
Query: 60 MIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARN 115
+++ + +V LE E+ + DVV + ++D + G + AL FFN MP RN
Sbjct: 625 VLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRN 684
Query: 116 VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM-WV 174
SWNSM++ + R E LK+F+ M G+ P+ T V VL+AC+H G L G
Sbjct: 685 SYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHF 744
Query: 175 HSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN 233
S S + + +C+ + + G +D D ++MP++ NV+ W + ++G N
Sbjct: 745 ESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRT-VLGACCRAN 803
Query: 234 GEKA 237
G KA
Sbjct: 804 GRKA 807
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 121/288 (42%), Gaps = 52/288 (18%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
S L DL + ++ K+G ARK+F++M R+ N ++ G V E A +L
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296
Query: 77 FERM-------PDRDVVSW-------------------------------------NCMI 92
F M P+ V+ N ++
Sbjct: 297 FMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLV 356
Query: 93 DGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNE 152
+ + G++ A F M ++ VSWNSM+ + F E ++ + M + +P
Sbjct: 357 NMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRH-DILPGS 415
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
TL+S L++CA L +G +H I ++V +S L+T+Y + G ++ R +F
Sbjct: 416 FTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSS 475
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALE----LFLEMEKKGPKPNDATF 256
MP + VSWNS+I G E++L FL ++ G K N TF
Sbjct: 476 MPEHDQVSWNSII---GALARSERSLPEAVVCFLNAQRAGQKLNRITF 520
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 11/282 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWN-C 59
MY+ G ++DAR +F D VS+NSMI G +NG A + + M D+ +
Sbjct: 358 MYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT 417
Query: 60 MIAGYVAVGDLEAAN-------ELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+I+ + L+ A E + D +V N ++ G + + F+ MP
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Query: 113 ARNVVSWNSMLALHVRA-KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
+ VSWNS++ R+ +S E + F +G+ + N T SVL+A + L +G
Sbjct: 478 EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKL-NRITFSSVLSAVSSLSFGELG 536
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP-VRNVVSWNSMIMGYGL 230
+H NNI + L+ Y KCG MD +F M R+ V+WNSMI GY
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ KAL+L M + G + + + VLSA + G
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERG 638
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 130/308 (42%), Gaps = 49/308 (15%)
Query: 4 VFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKN-GETGAARKLFDEMPVRDVWNWNCMIA 62
+FGR L+F S +D V N +I + K G G A F ++ V++ +WN +I+
Sbjct: 121 LFGRQIHG-LMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIIS 179
Query: 63 GYVAVGDLEAANELFERM------------------------PD---------------- 82
Y GD +A +F M PD
Sbjct: 180 VYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGL 239
Query: 83 -RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D+ + ++ + G++ A + FN+M RN V+ N ++ VR K E K+F +
Sbjct: 240 LTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMD 299
Query: 142 MMESGEAVPNE-ATLVSVLT--ACAHLGKLSVGMWVHSFIKSNNIKVDVL--LSTCLLTM 196
M + P L+S + A L G VH + + + VD + + L+ M
Sbjct: 300 MNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL-VDFMVGIGNGLVNM 358
Query: 197 YVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATF 256
Y KCG++ AR VF M ++ VSWNSMI G +G +A+E + M + P T
Sbjct: 359 YAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTL 418
Query: 257 VCVLSACT 264
+ LS+C
Sbjct: 419 ISSLSSCA 426
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR-----DVW 55
MYS GR+ A F++ + S+NSMI G+ ++G+ A KLF+ M + D
Sbjct: 663 MYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHV 722
Query: 56 NWNCMIAGYVAVGDLEAANELFERMPDR-----DVVSWNCMIDGCVRVGNVPLALEFFNR 110
+ +++ G LE + FE M D + ++CM D R G + +F +
Sbjct: 723 TFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEK 782
Query: 111 MPAR-NVVSWNSMLALHVRA 129
MP + NV+ W ++L RA
Sbjct: 783 MPMKPNVLIWRTVLGACCRA 802
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 191/341 (56%), Gaps = 4/341 (1%)
Query: 85 VVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMME 144
V + N +I+ +++G LA + +NV++WN M+ +VR + E LK M+
Sbjct: 98 VCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLS 157
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
+ PN+ + S L ACA LG L WVHS + + I+++ +LS+ L+ +Y KCG +
Sbjct: 158 FTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIG 217
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
+R+VF + +V WN+MI G+ HG +A+ +F EME + P+ TF+ +L+ C+
Sbjct: 218 TSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCS 277
Query: 265 HAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXX 324
H G++ EG YF LM R ++I+PK+EHYG +VDLL RAG VK + ELI+ + ++
Sbjct: 278 HCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIW 337
Query: 325 XXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIRE 384
T+ + ELGEI + L + + G Y++LSN Y++ +W+ ++VR ++ +
Sbjct: 338 RSLLSSS-RTYKNPELGEIAIQNLSKAKS---GDYVLLSNIYSSTKKWESAQKVRELMSK 393
Query: 385 KGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
+G++K S + ++ + S + +Y +L L
Sbjct: 394 EGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGL 434
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 111/265 (41%), Gaps = 43/265 (16%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV------- 65
LL+ SL+ + + N +I+ +K GE+G A+K+ ++V WN MI GYV
Sbjct: 88 LLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEE 147
Query: 66 -----------------------------AVGDLEAANELFERMPDRDV----VSWNCMI 92
+GDL A + M D + + + ++
Sbjct: 148 ALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALV 207
Query: 93 DGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNE 152
D + G++ + E F + +V WN+M+ E +++F E ME+ P+
Sbjct: 208 DVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSE-MEAEHVSPDS 266
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMYVKCGAMDLARDVFD 211
T + +LT C+H G L G + +I+ + ++ + + G + A ++ +
Sbjct: 267 ITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIE 326
Query: 212 EMPVR-NVVSWNSMIMGYGLHGNGE 235
MP+ +VV W S++ + N E
Sbjct: 327 SMPIEPDVVIWRSLLSSSRTYKNPE 351
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/375 (33%), Positives = 198/375 (52%), Gaps = 9/375 (2%)
Query: 28 SMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPD-RDVV 86
S++ + +G +A+ L +E D+ + N +I Y+ GDLE A LFER+ D V
Sbjct: 344 SLVHMYASSGLIASAQSLLNE--SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKV 401
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
SW MIDG + G+V A F ++ ++ V+W M++ V+ + F E + +M+ G
Sbjct: 402 SWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCG 461
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNI--KVDVLLSTCLLTMYVKCGAMD 204
P +T +L++ L G +H I D++L L++MY KCGA++
Sbjct: 462 -LKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIE 520
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
A ++F +M ++ VSWNSMIMG HG +KAL LF EM G KPN TF+ VLSAC+
Sbjct: 521 DAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACS 580
Query: 265 HAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXX 324
H+G++ G F M+ Y+I+P ++HY ++DLL RAG +K +EE I +
Sbjct: 581 HSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVY 640
Query: 325 XXXXXXXCTTHMDSE---LGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVM 381
D + + E A RL+EL+P++ ++ L N YA GR D + +R
Sbjct: 641 GALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKE 700
Query: 382 IREKGLQKEAASSVV 396
+ KG++K S V
Sbjct: 701 MGIKGVKKTPGCSWV 715
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 163/341 (47%), Gaps = 44/341 (12%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
GR DA LFD ++VS+N+++ G ++NG+ A+++FD MP RDV +WN MI GY+
Sbjct: 152 GRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYI 211
Query: 66 AVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLAL 125
+E A LF M +++VV+W M+ G R G+V A F MP RN+VSW +M++
Sbjct: 212 ENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISG 271
Query: 126 HVRAKSFWECLKMFDEMMESGEAV-PNEATLVSVLTACAHLGK--LSVGMWVHSFIKSN- 181
+ + E L +F EM + +AV PN TL+S+ AC LG +G +H+ + SN
Sbjct: 272 FAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNG 331
Query: 182 -------------------------------NIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
N D+ ++ Y+K G ++ A +F
Sbjct: 332 WETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLF 391
Query: 211 DEM-PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
+ + + + VSW SMI GY G+ +A LF ++ K + T+ ++S +
Sbjct: 392 ERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELF 447
Query: 270 MEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEE 310
E M R ++P Y LL+ AG N ++
Sbjct: 448 AEAASLLSDMVRC-GLKPLNSTYSV---LLSSAGATSNLDQ 484
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 153/326 (46%), Gaps = 65/326 (19%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ G + +AR+LF+ ++V+ N+M+ G+VK A LF EMP ++V +W M+
Sbjct: 87 YAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVML 145
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
G E A ELF+ MP+R+VVSWN ++ G +R G++ A + F+ MP+R+VVSWN+
Sbjct: 146 TALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNA 205
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
M+ ++ E +F +M E
Sbjct: 206 MIKGYIENDGMEEAKLLFGDMSEK------------------------------------ 229
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
+V+ T ++ Y + G + A +F EMP RN+VSW +MI G+ + +AL LF
Sbjct: 230 ----NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLF 285
Query: 242 LEMEK--KGPKPNDATFVCVLSACT-------------HAGMVMEGWWYFDLMRRVYNIE 286
LEM+K PN T + + AC HA ++ GW D R+
Sbjct: 286 LEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAK-- 343
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELI 312
+V + A +GL+ +++ L+
Sbjct: 344 -------SLVHMYASSGLIASAQSLL 362
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 107/239 (44%), Gaps = 49/239 (20%)
Query: 42 ARKLFDEMPVRDVWN----WNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVR 97
AR L D++P R N W +++ Y G L+ A LFE MP+R++V+ N M+ G V+
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVK 120
Query: 98 VGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
+ A F MP +NVVSW ML + +++FDEM E
Sbjct: 121 CRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPER------------ 167
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
+V+ L+T ++ G M+ A+ VFD MP R+
Sbjct: 168 ----------------------------NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRD 199
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF 276
VVSWN+MI GY + E+A LF +M +K N T+ ++ G V E + F
Sbjct: 200 VVSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVVTWTSMVYGYCRYGDVREAYRLF 254
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 223/438 (50%), Gaps = 44/438 (10%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------------ 49
YS G + A LFD D+VS+ +MIDG ++ + A + EM
Sbjct: 249 YSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMM 308
Query: 50 ------PVRDVWN--------------WNC-------MIAGYVAVGDLEAANELFERMPD 82
R V + ++C +I Y D++ A + FE
Sbjct: 309 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK 368
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
+ S N +I G V+ G V A E F++ +++ SWN+M++ + ++ S L +F EM
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREM 428
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
+ S + P+ T+VSV +A + LG L G H ++ + I + L+ ++ MY KCG+
Sbjct: 429 ISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGS 488
Query: 203 MDLARDVFDE---MPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCV 259
++ A ++F + + + WN++I G HG+ + AL+L+ +++ KPN TFV V
Sbjct: 489 IETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGV 548
Query: 260 LSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKX 319
LSAC HAG+V G YF+ M+ + IEP ++HYGC+VDLL +AG ++ ++E+IK + VK
Sbjct: 549 LSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKA 608
Query: 320 XXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVR 379
TH + E+ E+ A L ++P G +MLSN YA GRW+DV VR
Sbjct: 609 DVMIWGMLLSAS-RTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVR 667
Query: 380 VMIREKGLQ-KEAASSVV 396
+R + ++ A S VV
Sbjct: 668 EEMRTRDVEWSRAFSGVV 685
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 137/281 (48%), Gaps = 29/281 (10%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNV 101
ARKLFDEMP R++ WN M+ GY G +E A ELF+++ ++D+VSW MIDGC+R +
Sbjct: 227 ARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQL 286
Query: 102 PLALEFFNRMPARNVVSWNSMLA--LHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
AL ++ M + M+ L A+S + S + + T+V
Sbjct: 287 DEALVYYTEMLRCGMKPSEVMMVDLLSASARS-----------VGSSKGLQLHGTIVKRG 335
Query: 160 TACAHLGKLSVGMWVHSFIKSNNIKV-----------DVLLSTCLLTMYVKCGAMDLARD 208
C + ++ +H + SN+IK+ + L+ +VK G ++ AR+
Sbjct: 336 FDCYDFLQATI---IHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQARE 392
Query: 209 VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM-EKKGPKPNDATFVCVLSACTHAG 267
VFD+ +++ SWN+MI GY + + AL LF EM KP+ T V V SA + G
Sbjct: 393 VFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLG 452
Query: 268 MVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNS 308
+ EG D + I P I+D+ A+ G ++ +
Sbjct: 453 SLEEGKRAHDYL-NFSTIPPNDNLTAAIIDMYAKCGSIETA 492
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 121/228 (53%), Gaps = 13/228 (5%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
N ++ Y L A +F D S+N M+DG VR + AL+ F+ MP R+ V
Sbjct: 80 NSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCV 139
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
S+ +++ + + + E +++F EM G + NE TL +V++AC+HLG G+W
Sbjct: 140 SYTTLIKGYAQNNQWSEAMELFREMRNLG-IMLNEVTLATVISACSHLG----GIWDCRM 194
Query: 178 IKSNNIKVD----VLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
++S IK+ V +ST LL MY C + AR +FDEMP RN+V+WN M+ GY G
Sbjct: 195 LQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGL 254
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
E+A ELF ++ +K + ++ ++ C + E Y+ M R
Sbjct: 255 IEQAEELFDQITEK----DIVSWGTMIDGCLRKNQLDEALVYYTEMLR 298
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 216/436 (49%), Gaps = 41/436 (9%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
+ +D+ ++I ++K G+ A+ ++ + +P +DV W MI+G + +G E A +
Sbjct: 274 TGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIV 333
Query: 77 FERMPDR---------------------------------------DVVSWNCMIDGCVR 97
F M D + N +I +
Sbjct: 334 FSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAK 393
Query: 98 VGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
G++ +L F RM R++VSWN++++ + + + L +F+EM + T+VS
Sbjct: 394 CGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVS 453
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
+L AC+ G L VG +H + + I+ L+ T L+ MY KCG ++ A+ FD + ++
Sbjct: 454 LLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKD 513
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
VVSW +I GYG HG G+ ALE++ E G +PN F+ VLS+C+H GMV +G F
Sbjct: 514 VVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFS 573
Query: 278 LMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMD 337
M R + +EP EH C+VDLL RA ++++ + K + C +
Sbjct: 574 SMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKE-NFTRPSIDVLGIILDACRANGK 632
Query: 338 SELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVH 397
+E+ +I+ + +IEL+P D G Y+ L +++AA RWDDV +R GL+K S +
Sbjct: 633 TEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIE 692
Query: 398 LEDFESKYFVKNYSVH 413
+ + +F+ N++ H
Sbjct: 693 MNGKTTTFFM-NHTSH 707
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 163/337 (48%), Gaps = 42/337 (12%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM- 80
D+ NSM++ + K G A+ LFD+M RD+ +WN MI+GY +VG++ +L RM
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMR 237
Query: 81 -----PDRDVVSWNCMIDGC---------------------------------VRVGNVP 102
PD+ + + G ++ G
Sbjct: 238 GDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEE 297
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
+ +P ++VV W M++ +R + L +F EM++SG + +EA + SV+ +C
Sbjct: 298 ASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEA-IASVVASC 356
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
A LG +G VH ++ + +D L+TMY KCG +D + +F+ M R++VSWN
Sbjct: 357 AQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWN 416
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGPKPNDA-TFVCVLSACTHAGMVMEGWWYFDLMRR 281
++I GY + + KAL LF EM+ K + D+ T V +L AC+ AG + G ++ R
Sbjct: 417 AIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIR 476
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+ I P +VD+ ++ G ++ ++ +S K
Sbjct: 477 SF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK 512
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 135/272 (49%), Gaps = 6/272 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNC- 59
+Y+ FG ++ AR +F+ D+V + +MI + + G G A L +EM + +
Sbjct: 90 LYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT 149
Query: 60 ---MIAGYVAVGDLEAANELFERMP-DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARN 115
M++G + + L+ ++ D D+ N M++ + +V A + F++M R+
Sbjct: 150 LLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRD 209
Query: 116 VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVH 175
+VSWN+M++ + + E LK+ M G P++ T + L+ + L +G +H
Sbjct: 210 MVSWNTMISGYASVGNMSEILKLLYRMRGDG-LRPDQQTFGASLSVSGTMCDLEMGRMLH 268
Query: 176 SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGE 235
I VD+ L T L+TMY+KCG + + V + +P ++VV W MI G G E
Sbjct: 269 CQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAE 328
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
KAL +F EM + G + V+++C G
Sbjct: 329 KALIVFSEMLQSGSDLSSEAIASVVASCAQLG 360
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 16/178 (8%)
Query: 134 ECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCL 193
+ L F M+ + + +P+ T S+L ACA L +LS G+ +H + N D +S+ L
Sbjct: 29 QVLSTFSSML-ANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSL 87
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPND 253
+ +Y K G + AR VF+EM R+VV W +MI Y G +A L EM +G KP
Sbjct: 88 VNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGP 147
Query: 254 ATFVCVLSA--------CTHAGMVMEGWWYFD----LMRRVYNIEPKVEHYGCIVDLL 299
T + +LS C H V+ G FD +M + N+ K +H G DL
Sbjct: 148 VTLLEMLSGVLEITQLQCLHDFAVIYG---FDCDIAVMNSMLNLYCKCDHVGDAKDLF 202
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 223/425 (52%), Gaps = 13/425 (3%)
Query: 11 ARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WNWNCMIAGYVA 66
A L+F + V++ ++I G G+ K++ +M + + + + +
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 67 VGDLEAANELFERMPDRDVVS----WNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
+ + ++ + R S N ++D R G + A +F+ M +++++WN++
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTL 285
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
++ R+ S E L MF + ES VPN T S++ ACA++ L+ G +H I
Sbjct: 286 ISELERSDSS-EALLMF-QRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG 343
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEM-PVRNVVSWNSMIMGYGLHGNGEKALELF 241
+V L+ L+ MY KCG + ++ VF E+ RN+VSW SM++GYG HG G +A+ELF
Sbjct: 344 FNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELF 403
Query: 242 LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLAR 301
+M G +P+ F+ VLSAC HAG+V +G YF++M Y I P + Y C+VDLL R
Sbjct: 404 DKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 302 AGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSEL-GEIVAKRLIELEPMDIGPYI 360
AG + + EL++ + K C H + L + A++++EL+P +G Y+
Sbjct: 464 AGKIGEAYELVERMPFK-PDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYV 522
Query: 361 MLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYS 420
MLS YAA+G+W D RVR M+R G +KEA S + +E+ + V + +YS
Sbjct: 523 MLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYS 582
Query: 421 MLSEL 425
+L L
Sbjct: 583 VLGLL 587
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAK---SFWECLKMFDEMMESGEAVPNEATL 155
G V A F+ MP R+VV+W +M+ + + WEC F EM++ G + PNE TL
Sbjct: 59 GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWEC---FHEMVKQGTS-PNEFTL 114
Query: 156 VSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG-AMDLARDVFDEMP 214
SVL +C ++ L+ G VH + ++ + + ++ MY C M+ A +F ++
Sbjct: 115 SSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIK 174
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
V+N V+W ++I G+ G+G L+++ +M
Sbjct: 175 VKNDVTWTTLITGFTHLGDGIGGLKMYKQM 204
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 116/236 (49%), Gaps = 13/236 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWN 56
+Y G +S+A+ F DL+++N++I ++ ++ A +F V + +
Sbjct: 257 LYCRCGYLSEAKHYFHEMEDKDLITWNTLIS-ELERSDSSEALLMFQRFESQGFVPNCYT 315
Query: 57 WNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM- 111
+ ++A + L +L F R +++V N +ID + GN+P + F +
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIV 375
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
RN+VSW SM+ + E +++FD+M+ SG P+ ++VL+AC H G + G
Sbjct: 376 DRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSG-IRPDRIVFMAVLSACRHAGLVEKG 434
Query: 172 MWVHSFIKSN-NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMI 225
+ + ++S I D + C++ + + G + A ++ + MP + + +W +++
Sbjct: 435 LKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%)
Query: 188 LLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK 247
+L+T L+ Y + G ++ AR +FDEMP R+VV+W +MI GY +A E F EM K+
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 248 GPKPNDATFVCVLSACTHAGMVMEG 272
G PN+ T VL +C + ++ G
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYG 130
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 197/361 (54%), Gaps = 5/361 (1%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D DV + ++D + G + A + F+ MP RNVV+W+ M+ + + E L +F E
Sbjct: 148 DADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKE 207
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
+ AV N+ + SV++ CA+ L +G +H ++ + + L+++Y KCG
Sbjct: 208 ALFENLAV-NDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCG 266
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+ A VF+E+PV+N+ WN+M+ Y H + +K +ELF M+ G KPN TF+ VL+
Sbjct: 267 VPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLN 326
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXX 321
AC+HAG+V EG +YFD M+ IEP +HY +VD+L RAG ++ + E+I + +
Sbjct: 327 ACSHAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPID-PT 384
Query: 322 XXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVM 381
CT H ++EL A ++ EL P+ G +I LSN YAA GR++D + R +
Sbjct: 385 ESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKL 444
Query: 382 IREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAGSIEKDN 441
+R++G +KE S V + + + + +Y L+ELG ++ AG I +
Sbjct: 445 LRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGE--EMEKAGYIADTS 502
Query: 442 F 442
+
Sbjct: 503 Y 503
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 75/140 (53%), Gaps = 1/140 (0%)
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
W L+ +MM +G P++ L S +CA L + +G VH DV + +
Sbjct: 98 WMSLEFLKKMM-AGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSS 156
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
L+ MY KCG + AR +FDEMP RNVV+W+ M+ GY G E+AL LF E + N
Sbjct: 157 LVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVN 216
Query: 253 DATFVCVLSACTHAGMVMEG 272
D +F V+S C ++ ++ G
Sbjct: 217 DYSFSSVISVCANSTLLELG 236
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 43/257 (16%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA-----NEL 76
D+ +S++D + K GE ARK+FDEMP R+V W+ M+ GY +G+ E A L
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 77 FERMPDRDVVSWNCMIDGCV-----------------------------------RVGNV 101
FE + D S++ +I C + G
Sbjct: 210 FENLAVND-YSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVP 268
Query: 102 PLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
A + FN +P +N+ WN+ML + + + +++F M SG PN T ++VL A
Sbjct: 269 EGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMK-PNFITFLNVLNA 327
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS- 220
C+H G + G + +K + I+ L+ M + G + A +V MP+ S
Sbjct: 328 CSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESV 387
Query: 221 WNSMIMGYGLHGNGEKA 237
W +++ +H N E A
Sbjct: 388 WGALLTSCTVHKNTELA 404
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 207 bits (528), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 133/412 (32%), Positives = 220/412 (53%), Gaps = 15/412 (3%)
Query: 1 MYSVFGRVSDARLLFD----SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWN 56
++SV R+ AR +FD SSL + V + +M G+ +NG A ++ +M +
Sbjct: 176 LFSVCRRLDLARKIFDDVTDSSLLTEKV-WAAMAIGYSRNGSPRDALIVYVDMLCSFIEP 234
Query: 57 WNCMIA----GYVAVGDLEAAN----ELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFF 108
N I+ V + DL ++ +R D V +N ++ + G A + F
Sbjct: 235 GNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVF 294
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
+ M RNVV+WNS++++ + E +F +M E + ATL ++L AC+ + L
Sbjct: 295 DGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGF-SWATLTTILPACSRVAAL 353
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
G +H+ I + K DV L L+ MY KCG ++ +R VFD M +++ SWN M+ Y
Sbjct: 354 LTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCY 413
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPK 288
++GN E+ + LF M + G P+ TFV +LS C+ G+ G F+ M+ + + P
Sbjct: 414 AINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPA 473
Query: 289 VEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRL 348
+EHY C+VD+L RAG +K + ++I+ + K C H + +GEI AK L
Sbjct: 474 LEHYACLVDILGRAGKIKEAVKVIETMPFK-PSASIWGSLLNSCRLHGNVSVGEIAAKEL 532
Query: 349 IELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
LEP + G Y+M+SN YA WD+V+++R M++++G++KEA S V ++D
Sbjct: 533 FVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKD 584
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 80 MPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMF 139
MP DV++ + +G+ + F ++P R V + L L ++ E + +
Sbjct: 64 MPSLDVITPQAYL---TPLGSQSINHAKFLQIPWRQFV-FTKPLGLS-KSTKLDEAVTLI 118
Query: 140 DEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMYV 198
+ S + +L AC L G+ + S I +N +++ + L + L+T++
Sbjct: 119 ENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFS 178
Query: 199 KCGAMDLARDVFDEMPVRNVVS---WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDAT 255
C +DLAR +FD++ ++++ W +M +GY +G+ AL ++++M +P + +
Sbjct: 179 VCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFS 238
Query: 256 FVCVLSAC 263
L AC
Sbjct: 239 ISVALKAC 246
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 207 bits (528), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 218/464 (46%), Gaps = 42/464 (9%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPV---------- 51
Y+ + AR +FD D+VS+NSMI G+ ++G +K++ M
Sbjct: 177 YTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVT 236
Query: 52 ------------------------------RDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D+ N +I Y G L+ A LF+ M
Sbjct: 237 VISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMS 296
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
++D V++ +I G + G V A+ F+ M + + +WN+M++ ++ E + F E
Sbjct: 297 EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFRE 356
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M+ G + PN TL S+L + + L G +H+F N ++ ++T ++ Y K G
Sbjct: 357 MIRCG-SRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLG 415
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+ A+ VFD R++++W ++I Y +HG+ + A LF +M+ G KP+D T VLS
Sbjct: 416 FLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLS 475
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXX 321
A H+G FD M Y+IEP VEHY C+V +L+RAG + ++ E I + +
Sbjct: 476 AFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPID-PI 534
Query: 322 XXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVM 381
+ D E+ RL E+EP + G Y +++N Y GRW++ E VR
Sbjct: 535 AKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNK 594
Query: 382 IREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
++ GL+K +S + E + K+ S R + MY ++ L
Sbjct: 595 MKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGL 638
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 99/167 (59%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D DV N MI + N+ A + F+ M R+VVSWNSM++ + ++ SF +C KM+
Sbjct: 164 DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKA 223
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M+ + PN T++SV AC L G+ VH + N+I++D+ L ++ Y KCG
Sbjct: 224 MLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCG 283
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
++D AR +FDEM ++ V++ ++I GY HG ++A+ LF EME G
Sbjct: 284 SLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIG 330
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 96/212 (45%), Gaps = 11/212 (5%)
Query: 70 LEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRA 129
L A +F PD + S +I R AL F+ + RN S+N++L +
Sbjct: 44 LHARIVVFSIKPDNFLASK--LISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR 101
Query: 130 KSFWECLKMF-----DEMMESGEAVPNEATLVSVLTA---CAHLGKLSVGMWVHSFIKSN 181
+ +++ +F S A P+ ++ VL A C S+ VH F+
Sbjct: 102 EMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRG 161
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
DV + ++T Y KC ++ AR VFDEM R+VVSWNSMI GY G+ E +++
Sbjct: 162 GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMY 221
Query: 242 LEMEKKGP-KPNDATFVCVLSACTHAGMVMEG 272
M KPN T + V AC + ++ G
Sbjct: 222 KAMLACSDFKPNGVTVISVFQACGQSSDLIFG 253
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 223/432 (51%), Gaps = 10/432 (2%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
YS G V AR +FD L LVS+N+MI + +N A +F EM I
Sbjct: 106 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 165
Query: 62 AGYVAVGDLEAANELFERMP--------DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
+ ++ + +++ D ++ ++D + G + A++ F M
Sbjct: 166 SSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQD 225
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
++ V+W+SM+A +V+ K++ E L ++ + N+ TL SV+ AC++L L G
Sbjct: 226 KSSVTWSSMVAGYVQNKNYEEALLLYRRA-QRMSLEQNQFTLSSVICACSNLAALIEGKQ 284
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
+H+ I + +V +++ + MY KCG++ + +F E+ +N+ WN++I G+ H
Sbjct: 285 MHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHAR 344
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYG 293
++ + LF +M++ G PN+ TF +LS C H G+V EG +F LMR Y + P V HY
Sbjct: 345 PKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYS 404
Query: 294 CIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEP 353
C+VD+L RAGL+ + ELIK + C + + EL E+ A++L ELEP
Sbjct: 405 CMVDILGRAGLLSEAYELIKSIPFD-PTASIWGSLLASCRVYKNLELAEVAAEKLFELEP 463
Query: 354 MDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVH 413
+ G +++LSN YAA +W+++ + R ++R+ ++K S + ++D + V
Sbjct: 464 ENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHP 523
Query: 414 RKRIMYSMLSEL 425
R R + S L L
Sbjct: 524 RIREICSTLDNL 535
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 101/189 (53%), Gaps = 1/189 (0%)
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM 143
DV N +I+ + G V LA + F+ M R++VSWN+M+ L+ R + E L +F EM
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 144 ESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAM 203
G +E T+ SVL+AC +H I +++ + T LL +Y KCG +
Sbjct: 155 NEGFKF-SEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMI 213
Query: 204 DLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
A VF+ M ++ V+W+SM+ GY + N E+AL L+ ++ + N T V+ AC
Sbjct: 214 KDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICAC 273
Query: 264 THAGMVMEG 272
++ ++EG
Sbjct: 274 SNLAALIEG 282
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
+L CA G + H I +++ DV L L+ Y KCG ++LAR VFD M R+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
+VSWN+MI Y + +AL++FLEM +G K ++ T VLSAC +E
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 278 LMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
L + I+ + ++DL A+ G++K++ ++ + + K
Sbjct: 187 LSVKTC-IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK 226
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 209/404 (51%), Gaps = 13/404 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPV----RDVWN 56
YS RV + R+LFD LD VSYN +I + + + A+ F EM R +
Sbjct: 294 FYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFP 353
Query: 57 WNCMIAGYVAVGDLEAANELFER----MPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ M++ + L+ +L + D + N ++D + A F +P
Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R VSW ++++ +V+ LK+F +M S +++T +VL A A L +G
Sbjct: 414 QRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN-LRADQSTFATVLKASASFASLLLGK 472
Query: 173 WVHSFI-KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
+H+FI +S N++ +V + L+ MY KCG++ A VF+EMP RN VSWN++I + +
Sbjct: 473 QLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADN 531
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
G+GE A+ F +M + G +P+ + + VL+AC+H G V +G YF M +Y I PK +H
Sbjct: 532 GDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKH 591
Query: 292 YGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL 351
Y C++DLL R G +E+L+ + + C H + L E A++L +
Sbjct: 592 YACMLDLLGRNGRFAEAEKLMDEMPFE-PDEIMWSSVLNACRIHKNQSLAERAAEKLFSM 650
Query: 352 EPM-DIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
E + D Y+ +SN YAA G W+ V V+ +RE+G++K A S
Sbjct: 651 EKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYS 694
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 35/259 (13%)
Query: 7 RVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVA 66
R DAR++ + D N +++ ++ G+ AARK++DEMP ++ + N MI+G+V
Sbjct: 33 RRVDARII-KTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVK 91
Query: 67 VGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALH 126
GD+ +A +LF+ MPDR VV+W ++ W +
Sbjct: 92 TGDVSSARDLFDAMPDRTVVTWTILM-------------------------GW------Y 120
Query: 127 VRAKSFWECLKMFDEMMESGE-AVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV 185
R F E K+F +M S +P+ T ++L C + VH+F
Sbjct: 121 ARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDT 180
Query: 186 DVLL--STCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLE 243
+ L S LL Y + +DLA +F+E+P ++ V++N++I GY G +++ LFL+
Sbjct: 181 NPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLK 240
Query: 244 MEKKGPKPNDATFVCVLSA 262
M + G +P+D TF VL A
Sbjct: 241 MRQSGHQPSDFTFSGVLKA 259
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 153/354 (43%), Gaps = 51/354 (14%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
G+VS AR ++D + VS N+MI GHVK G+ +AR LFD MP R V W ++ Y
Sbjct: 62 GQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYA 121
Query: 66 AVGDLEAANELFERM--------PDRDVVSWNCMIDGC----------------VRVG-- 99
+ A +LF +M PD V++ ++ GC V++G
Sbjct: 122 RNSHFDEAFKLFRQMCRSSSCTLPDH--VTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFD 179
Query: 100 -------------------NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
+ LA F +P ++ V++N+++ + + + E + +F
Sbjct: 180 TNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFL 239
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
+M +SG P++ T VL A L ++G +H+ + D + +L Y K
Sbjct: 240 KMRQSGHQ-PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKH 298
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
+ R +FDEMP + VS+N +I Y E +L F EM+ G + F +L
Sbjct: 299 DRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATML 358
Query: 261 SACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYG-CIVDLLARAGLVKNSEELIK 313
S + + G + + + H G +VD+ A+ + + +E + K
Sbjct: 359 SIAANLSSLQMGRQLH--CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFK 410
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 142/318 (44%), Gaps = 16/318 (5%)
Query: 7 RVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIA 62
R+ A +LF+ D V++N++I G+ K+G + LF +M + ++ ++
Sbjct: 199 RLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLK 258
Query: 63 GYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVS 118
V + D +L RD N ++D + V F+ MP + VS
Sbjct: 259 AVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVS 318
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
+N +++ + +A + L F EM G N ++L+ A+L L +G +H
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQCMGFDRRN-FPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY---GLHGNGE 235
+ + L+ MY KC + A +F +P R VSW ++I GY GLHG G
Sbjct: 378 LLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG- 436
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
L+LF +M + + +TF VL A ++ G + R N+E G +
Sbjct: 437 --LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-L 493
Query: 296 VDLLARAGLVKNSEELIK 313
VD+ A+ G +K++ ++ +
Sbjct: 494 VDMYAKCGSIKDAVQVFE 511
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 111/261 (42%), Gaps = 29/261 (11%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
++ S + ++D + K G A ++F+EMP R+ +WN +I+ + GD EAA F +M
Sbjct: 486 NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI 545
Query: 82 DR----DVVSWNCMIDGCVRVGNVPLALEFFNRM-PARNVVS----WNSMLALHVRAKSF 132
+ D VS ++ C G V E+F M P + + ML L R F
Sbjct: 546 ESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRF 605
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
E K+ DEM P+E SVL AC S+ + S D
Sbjct: 606 AEAEKLMDEM----PFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVS 661
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNV-----VSW---NSMIMGYG----LHGNGEKAL-- 238
+ +Y G + RDV M R + SW N I + H NG++ +
Sbjct: 662 MSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRK 721
Query: 239 --ELFLEMEKKGPKPNDATFV 257
EL E+E++G KP+ ++ V
Sbjct: 722 INELTAEIEREGYKPDTSSVV 742
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/377 (33%), Positives = 213/377 (56%), Gaps = 7/377 (1%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRD--VVSWNCMIDGCVRVGNVPLALEFFNRMPARN 115
N +I+ Y G +E A L E+ +D + + ++DG +++G++ A F + R+
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377
Query: 116 VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVH 175
VV+W +M+ + + S+ E + +F M+ G+ PN TL ++L+ + L LS G +H
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR-PNSYTLAAMLSVASSLASLSHGKQIH 436
Query: 176 -SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMIMGYGLHGN 233
S +KS I V +S L+TMY K G + A FD + R+ VSW SMI+ HG+
Sbjct: 437 GSAVKSGEI-YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYG 293
E+ALELF M +G +P+ T+V V SACTHAG+V +G YFD+M+ V I P + HY
Sbjct: 496 AEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYA 555
Query: 294 CIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEP 353
C+VDL RAGL++ ++E I+ + ++ C H + +LG++ A+RL+ LEP
Sbjct: 556 CMVDLFGRAGLLQEAQEFIEKMPIE-PDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEP 614
Query: 354 MDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVH 413
+ G Y L+N Y+A G+W++ ++R +++ ++KE S + ++ + V++ +
Sbjct: 615 ENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHP 674
Query: 414 RKRIMYSMLSELGAHIK 430
K +Y + ++ IK
Sbjct: 675 EKNEIYMTMKKIWDEIK 691
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 128/266 (48%), Gaps = 64/266 (24%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
NS+++ + K G+ A+ +FD M VRD+ +WN MIA ++ VG ++ A FE+M +RD+V
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
+WN MI G + G AL+ F++M +++S
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLS---------------------------- 276
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA---- 202
P+ TL SVL+ACA+L KL +G +HS I + + ++ L++MY +CG
Sbjct: 277 ---PDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETA 333
Query: 203 -----------------------------MDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
M+ A+++F + R+VV+W +MI+GY HG+
Sbjct: 334 RRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGS 393
Query: 234 GEKALELFLEMEKKGPKPNDATFVCV 259
+A+ LF M G +PN T +
Sbjct: 394 YGEAINLFRSMVGGGQRPNSYTLAAM 419
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 152/348 (43%), Gaps = 87/348 (25%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
+ S L + N++++ + K G ARKLFDEMP+R ++WN +++ Y GD+++
Sbjct: 40 VIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDST 99
Query: 74 NELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFW 133
E F+++P RD VSW MI G +G +
Sbjct: 100 CEFFDQLPQRDSVSWTTMIVGYKNIGQ-------------------------------YH 128
Query: 134 ECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCL 193
+ +++ +M++ G P + TL +VL + A + G VHSFI ++ +V +S L
Sbjct: 129 KAIRVMGDMVKEG-IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSL 187
Query: 194 LTMYVKC-------------------------------GAMDLARDVFDEMPVRNVVSWN 222
L MY KC G MDLA F++M R++V+WN
Sbjct: 188 LNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWN 247
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKG-PKPNDATFVCVLSACT-----------HAGMVM 270
SMI G+ G +AL++F +M + P+ T VLSAC H+ +V
Sbjct: 248 SMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVT 307
Query: 271 EGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
G FD+ V N ++ + +R G V+ + LI+ K
Sbjct: 308 TG---FDISGIVLN---------ALISMYSRCGGVETARRLIEQRGTK 343
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 129/301 (42%), Gaps = 58/301 (19%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLV--SYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWN 58
MYS G V AR L + T DL + +++DG++K G+ A+ +F + RDV W
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382
Query: 59 CMIAGYVAVGDLEAANELFERM------PDR----------------------------- 83
MI GY G A LF M P+
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 442
Query: 84 ----DVVSWNCMIDGCVRVGNVPLALEFFNRMPA-RNVVSWNSMLALHVRAKSFWECLKM 138
V N +I + GN+ A F+ + R+ VSW SM+ + E L++
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLST-----CL 193
F+ M+ G P+ T V V +AC H G ++ G +K VD ++ T C+
Sbjct: 503 FETMLMEG-LRPDHITYVGVFSACTHAGLVNQGRQYFDMMKD----VDKIIPTLSHYACM 557
Query: 194 LTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALE--LFLEMEKK 247
+ ++ + G + A++ ++MP+ +VV+W S++ +H N G+ A E L LE E
Sbjct: 558 VDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENS 617
Query: 248 G 248
G
Sbjct: 618 G 618
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 150 PNEATLVSVLTACAHLGKLSV--------GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
P +L ++L C +L + SV VH + + + V L L+ +Y K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK 247
AR +FDEMP+R SWN+++ Y G+ + E F ++ ++
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQR 109
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 213/419 (50%), Gaps = 41/419 (9%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
S L LDL +S+ + K G + KLF +P +D W MI+G+ G L A L
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGL 538
Query: 77 FERM------PDRDVVS---------------------------------WNCMIDGCVR 97
F M PD ++ + +++ +
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSK 598
Query: 98 VGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
G++ LA + ++R+P + VS +S+++ + + + +F +M+ SG + + A + S
Sbjct: 599 CGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFA-ISS 657
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
+L A A + S+G VH++I + + + + LLTMY K G++D F ++ +
Sbjct: 658 ILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPD 717
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
+++W ++I Y HG +AL+++ M++KG KP+ TFV VLSAC+H G+V E +++ +
Sbjct: 718 LIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLN 777
Query: 278 LMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMD 337
M + Y IEP+ HY C+VD L R+G ++ +E I + +K C H +
Sbjct: 778 SMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIK-PDALVWGTLLAACKIHGE 836
Query: 338 SELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
ELG++ AK+ IELEP D G YI LSN A G WD+VE R +++ G+QKE S V
Sbjct: 837 VELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 143/279 (51%), Gaps = 15/279 (5%)
Query: 7 RVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPV----RDVWNWNCMIA 62
R DA +F SL+ ++ +N++I G ++N GA LF EM V D + ++ ++A
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259
Query: 63 GYVAVGDLEAANELFERMPD---RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
++ L + R+ DV ++D + G++ A+E F+R+P +VVSW
Sbjct: 260 ACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSW 319
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
ML+ + ++ + L++F EM SG + N T+ SV++AC + VH+++
Sbjct: 320 TVMLSGYTKSNDAFSALEIFKEMRHSGVEI-NNCTVTSVISACGRPSMVCEASQVHAWVF 378
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVF---DEMPVRNVVSWNSMIMGYGLHGNGEK 236
+ +D ++ L++MY K G +DL+ VF D++ +N+V N MI + K
Sbjct: 379 KSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGK 436
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSA--CTHAGMVMEGW 273
A+ LF M ++G + ++ + +LS C + G + G+
Sbjct: 437 AIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGY 475
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 140/302 (46%), Gaps = 50/302 (16%)
Query: 5 FGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGY 64
FG+V AR++ D+ +++D + K G A ++F +P V +W M++GY
Sbjct: 269 FGKVVQARVI--KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGY 326
Query: 65 VAVGDLEAANELFERMPDRDVVSWNC----MIDGCVR----------------------- 97
D +A E+F+ M V NC +I C R
Sbjct: 327 TKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDS 386
Query: 98 ------------VGNVPLALEFF---NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
G++ L+ + F + + +N+V N M+ ++K + +++F M
Sbjct: 387 SVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRM 444
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
++ G +E ++ S+L+ L L++G VH + + + +D+ + + L T+Y KCG+
Sbjct: 445 LQEGLRT-DEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGS 500
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
++ + +F +P ++ W SMI G+ +G +A+ LF EM G P+++T VL+
Sbjct: 501 LEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTV 560
Query: 263 CT 264
C+
Sbjct: 561 CS 562
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 7/168 (4%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG-EAVPNEATLVS 157
G++ A + F+ +P +VVS N M++ + + + F E L+ F +M G EA NE + S
Sbjct: 98 GSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEA--NEISYGS 155
Query: 158 VLTACAHLGK--LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV 215
V++AC+ L S + H+ IK +V+ S L+ ++ K + A VF +
Sbjct: 156 VISACSALQAPLFSELVCCHT-IKMGYFFYEVVESA-LIDVFSKNLRFEDAYKVFRDSLS 213
Query: 216 RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
NV WN++I G + N +LF EM KP+ T+ VL+AC
Sbjct: 214 ANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAAC 261
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%)
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
+ DV L+ LL+ Y G+M A +FD +P +VVS N MI GY H E++L F
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 243 EMEKKGPKPNDATFVCVLSACT 264
+M G + N+ ++ V+SAC+
Sbjct: 140 KMHFLGFEANEISYGSVISACS 161
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 211/415 (50%), Gaps = 41/415 (9%)
Query: 23 LVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPD 82
L S N++I + K G+ A LF ++ + + +WN +I +V G L+ A LF + +
Sbjct: 329 LPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEE 388
Query: 83 --------RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWE 134
+VV+W +I GC G +LE+F +M V++
Sbjct: 389 MNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLA---------------- 432
Query: 135 CLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLL 194
N T+ +L+ CA L L++G +H + ++ ++L+ L+
Sbjct: 433 ----------------NSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALV 476
Query: 195 TMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDA 254
MY KCG + VF+ + ++++SWNS+I GYG+HG EKAL +F M G P+
Sbjct: 477 NMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGI 536
Query: 255 TFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKY 314
V VLSAC+HAG+V +G F M + + +EP+ EHY CIVDLL R G +K + E++K
Sbjct: 537 ALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKN 596
Query: 315 VSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDD 374
+ ++ C H + ++ E +A +L LEP G Y++LSN Y+A GRW++
Sbjct: 597 MPME-PKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEE 655
Query: 375 VERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHI 429
VR + ++K L+K + SS + ++ + K+ + +Y +L +L +H+
Sbjct: 656 SANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHM 710
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 32/258 (12%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
N ++ + K G G A LF EMPVR+ +WN MI G+ D E+A ++FE M +
Sbjct: 197 NELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEF- 255
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
+ V+W S+L+ H + F + LK F M SG
Sbjct: 256 --------------------------KPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSG 289
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
AV EA L + CA L LS+ VH ++ + + L+ +Y K G + A
Sbjct: 290 NAVSGEA-LAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDA 348
Query: 207 RDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP----KPNDATFVCVLSA 262
+F ++ + + SWNS+I + G ++AL LF E+E+ K N T+ V+
Sbjct: 349 EHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKG 408
Query: 263 CTHAGMVMEGWWYFDLMR 280
C G + YF M+
Sbjct: 409 CNVQGRGDDSLEYFRQMQ 426
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
WNS+L +V + L+++ M + G + L +L AC +LG+ + H+ +
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRG-LTGDGYILPLILRACRYLGRFGLCRAFHTQV 184
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
+K ++ + LLT+Y K G M A ++F EMPVRN +SWN MI G+ + E A+
Sbjct: 185 IQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAV 244
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
++F M+++ KP++ T+ VLS + G + YF LMR
Sbjct: 245 KIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMR 286
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 190/354 (53%), Gaps = 6/354 (1%)
Query: 51 VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
++D + MI Y G + LF + + N I G R G V ALE F
Sbjct: 284 LKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFEL 343
Query: 111 MPAR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
+ NVVSW S++A + E L++F EM +G PN T+ S+L AC ++
Sbjct: 344 FKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG-VKPNHVTIPSMLPACGNIA 402
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
L G H F ++ +V + + L+ MY KCG ++L++ VF+ MP +N+V WNS++
Sbjct: 403 ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMN 462
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
G+ +HG ++ + +F + + KP+ +F +LSAC G+ EGW YF +M Y I+
Sbjct: 463 GFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIK 522
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAK 346
P++EHY C+V+LL RAG ++ + +LIK + + C + +L EI A+
Sbjct: 523 PRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFE-PDSCVWGALLNSCRLQNNVDLAEIAAE 581
Query: 347 RLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
+L LEP + G Y++LSN YAA+G W +V+ +R + GL+K S + +++
Sbjct: 582 KLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 115/239 (48%), Gaps = 6/239 (2%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
D + M Y+ G + A ++F+RM D+DVV+ + ++ R G + + + M
Sbjct: 150 DAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEME 209
Query: 113 AR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
+ N+VSWN +L+ R+ E + MF ++ G P++ T+ SVL + L
Sbjct: 210 SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLG-FCPDQVTVSSVLPSVGDSEML 268
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
++G +H ++ + D + + ++ MY K G + +F++ + N+ I G
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
+G +KALE+F +++ + N ++ +++ C G +E F M +V ++P
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKP 386
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
+P + S++S++ +AK F + + +F M G +P+ L ++ CA L
Sbjct: 73 LQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHG-LIPDSHVLPNLFKVCAELSA 131
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
VG +H + + +D + + MY++CG M AR VFD M ++VV+ ++++
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
Y G E+ + + EME G + N ++ +LS +G
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSG 231
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 30/285 (10%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI-------AGYV 65
L + ++ L++VS+ S+I G +NG+ A +LF EM V V + I
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 66 AVGDLEAANELFERMPDRDVVS-WNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML- 123
A+G + + R+ D V + +ID + G + L+ FN MP +N+V WNS++
Sbjct: 403 ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMN 462
Query: 124 --ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
++H +AK E + +F+ +M + P+ + S+L+AC +G G W + + S
Sbjct: 463 GFSMHGKAK---EVMSIFESLMRT-RLKPDFISFTSLLSACGQVGLTDEG-WKYFKMMSE 517
Query: 182 NIKVDVLLS--TCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GE 235
+ L +C++ + + G + A D+ EMP + W +++ L N E
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAE 577
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
A E +E + P T+V + + GM W D +R
Sbjct: 578 IAAEKLFHLEPENP----GTYVLLSNIYAAKGM----WTEVDSIR 614
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 203/374 (54%), Gaps = 9/374 (2%)
Query: 64 YVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML 123
YV + L A F+ D +VVS +I G ++ AL F MP R+VV+WN+++
Sbjct: 138 YVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVI 197
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS-FIKSNN 182
+ E + F +M+ G +PNE+T +TA +++ G +H+ IK
Sbjct: 198 GGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLG 257
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEM--PVRNVVSWNSMIMGYGLHGNGEKALEL 240
+ +V + L++ Y KCG M+ + F+++ RN+VSWNSMI GY +G GE+A+ +
Sbjct: 258 KRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAM 317
Query: 241 FLEMEK-KGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP---KVEHYGCIV 296
F +M K +PN+ T + VL AC HAG++ EG+ YF+ Y+ +P ++EHY C+V
Sbjct: 318 FEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMV 376
Query: 297 DLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDI 356
D+L+R+G K +EELIK + + C H + L ++ A +++EL+P D+
Sbjct: 377 DMLSRSGRFKEAEELIKSMPLD-PGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDV 435
Query: 357 GPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKR 416
Y+MLSN Y+A W +V +R ++E GL++ S + + D + + + K
Sbjct: 436 SSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKD 495
Query: 417 IMYSMLSELGAHIK 430
+Y ML+ + H++
Sbjct: 496 EVYRMLALVSQHLE 509
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 140/332 (42%), Gaps = 62/332 (18%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y ++DAR FD + ++VS ++I G++K E A LF MP R V WN +I
Sbjct: 138 YVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVI 197
Query: 62 AGYVAVGDLEAANELFERM-------PDR------------------------------- 83
G+ G E A F M P+
Sbjct: 198 GGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLG 257
Query: 84 ---DVVSWNCMIDGCVRVGNVPLALEFFNRM--PARNVVSWNSMLALHVRAKSFWECLKM 138
+V WN +I + GN+ +L FN++ RN+VSWNSM+ + E + M
Sbjct: 258 KRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAM 317
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW-----VHSFIKSNNIKVDVLLSTCL 193
F++M++ PN T++ VL AC H G + G V+ + N ++++ C+
Sbjct: 318 FEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHY--ACM 375
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVS-WNSMIMGYGLHGN---GEKALELFLEMEKKGP 249
+ M + G A ++ MP+ + W +++ G +H N + A LE++
Sbjct: 376 VDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELD---- 431
Query: 250 KPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
P D + +LS +A ME W L+RR
Sbjct: 432 -PRDVSSYVMLS---NAYSAMENWQNVSLIRR 459
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 94/225 (41%), Gaps = 64/225 (28%)
Query: 73 ANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSF 132
A+++F+ +P+ DV+S +I V+ A + F R +L L +R
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKR-----------LLCLGIR---- 90
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
PNE T +V+ + + +G +H + + +V + +
Sbjct: 91 -----------------PNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSA 133
Query: 193 LLTMYVKCGAMDLARDVFDE-------------------------------MPVRNVVSW 221
+L YVK + AR FD+ MP R+VV+W
Sbjct: 134 VLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTW 193
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPK-PNDATFVCVLSACTH 265
N++I G+ G E+A+ F++M ++G PN++TF C ++A ++
Sbjct: 194 NAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISN 238
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 5/197 (2%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
A + F+ +P +V+S +++ V+ E + F ++ G PNE T +V+ +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLG-IRPNEFTFGTVIGSST 104
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
+ +G +H + + +V + + +L YVK + AR FD+ NVVS +
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVY 283
+I GY E+AL LF M P+ + T+ V+ + G E F M R
Sbjct: 165 LISGYLKKHEFEEALSLFRAM----PERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREG 220
Query: 284 NIEPKVEHYGCIVDLLA 300
+ P + C + ++
Sbjct: 221 VVIPNESTFPCAITAIS 237
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 189/337 (56%), Gaps = 5/337 (1%)
Query: 64 YVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML 123
Y VGDLE++ ++F+ + + VV+ N ++D C R G + A E+F RMP +VVSW +++
Sbjct: 131 YGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVI 190
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAV--PNEATLVSVLTACAHL--GKLSVGMWVHSFIK 179
+ + L +F EM+++ AV PNEAT VSVL++CA+ G + +G +H ++
Sbjct: 191 NGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVM 250
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
S I + L T LL MY K G +++A +FD++ + V +WN++I +G ++ALE
Sbjct: 251 SKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALE 310
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
+F M+ PN T + +L+AC + +V G F + Y I P EHYGC+VDL+
Sbjct: 311 MFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLI 370
Query: 300 ARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPY 359
RAGL+ ++ I+ + + C H ++ELG V K+LI L+P G Y
Sbjct: 371 GRAGLLVDAANFIQSLPFE-PDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQY 429
Query: 360 IMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
+ LS A W + E++R + E G++K A SV+
Sbjct: 430 VALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 45/224 (20%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
Y G + +R +FD L +V+ NS++D +NGE A + F MPV DV +W +
Sbjct: 130 FYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTV 189
Query: 61 IAGYVAVGDLEAANELFERM--PDRDVVSWN-----CMIDGCV----------------- 96
I G+ G A +F M +R V++ N ++ C
Sbjct: 190 INGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYV 249
Query: 97 --------------------RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECL 136
+ G++ +AL F+++ + V +WN++++ + L
Sbjct: 250 MSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQAL 309
Query: 137 KMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS 180
+MF EMM+S PN TL+++LTACA + +G+ + S I S
Sbjct: 310 EMF-EMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 204 bits (520), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 206/397 (51%), Gaps = 12/397 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+Y+ G++ +ARL FDS DLVS+N+MIDG+ N + LF M D +
Sbjct: 157 LYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFT 216
Query: 57 WNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ ++ + V LE +EL + R +++ V+ G++ A +
Sbjct: 217 FGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTK 276
Query: 113 ARNVVSWNSML-ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
R+++S +++ + + +F +M+ + +E + S+L C + +++G
Sbjct: 277 KRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKM-DEVVVSSMLKICTTIASVTIG 335
Query: 172 MWVHSF-IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
+H F +KS+ I+ DV L L+ MY K G ++ A F+EM ++V SW S+I GYG
Sbjct: 336 RQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGR 395
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
HGN EKA++L+ ME + KPND TF+ +LSAC+H G GW +D M + IE + E
Sbjct: 396 HGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREE 455
Query: 291 HYGCIVDLLARAGLVKNSEELIKYV-SVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
H CI+D+LAR+G ++ + LI+ + C H + +L ++ A +L+
Sbjct: 456 HLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLL 515
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKG 386
+EP YI L++ YAA G WD+ R +++E G
Sbjct: 516 SMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESG 552
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 98/172 (56%), Gaps = 1/172 (0%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
+ID ++ G+V A + F+R+ R+VVSW +M++ R + L +F EM +
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHRE-DVKA 111
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
N+ T SVL +C LG L GM +H ++ N ++++ + LL++Y +CG M+ AR F
Sbjct: 112 NQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQF 171
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
D M R++VSWN+MI GY + + + LF M +G KP+ TF +L A
Sbjct: 172 DSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 129/320 (40%), Gaps = 41/320 (12%)
Query: 29 MIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDV--- 85
+ID ++K G+ ARKLFD + RDV +W MI+ + G A LF+ M DV
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 86 ------VSWNCMIDGCV------------------------------RVGNVPLALEFFN 109
V +C GC+ R G + A F+
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFD 172
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
M R++VSWN+M+ + +F M+ G+ P+ T S+L A + L
Sbjct: 173 SMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKK-PDCFTFGSLLRASIVVKCLE 231
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
+ +H L L+ YVKCG++ A + + R+++S ++I G+
Sbjct: 232 IVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFS 291
Query: 230 LHGN-GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPK 288
N A ++F +M + K ++ +L CT V G + I
Sbjct: 292 QQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFD 351
Query: 289 VEHYGCIVDLLARAGLVKNS 308
V ++D+ A++G ++++
Sbjct: 352 VALGNSLIDMYAKSGEIEDA 371
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 156 VSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV 215
+ L C++ + +H +N ++ L L+ +Y+K G + AR +FD +
Sbjct: 16 LKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISK 75
Query: 216 RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWY 275
R+VVSW +MI + G AL LF EM ++ K N T+ VL +C G + EG
Sbjct: 76 RDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGM-- 133
Query: 276 FDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
I VE C +L+ R+ L+
Sbjct: 134 --------QIHGSVEKGNCAGNLIVRSALL 155
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 204 bits (520), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 133/410 (32%), Positives = 217/410 (52%), Gaps = 16/410 (3%)
Query: 18 SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELF 77
S D+V ++++D + K G A+K+FD +D+ WN ++A Y G A LF
Sbjct: 405 SFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLF 464
Query: 78 -----ERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVR 128
E +P +V++WN +I +R G V A + F +M + N++SW +M+ V+
Sbjct: 465 YGMQLEGVPP-NVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQ 523
Query: 129 AKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVL 188
E + +M ESG PN ++ L+ACAHL L +G +H +I N++ L
Sbjct: 524 NGCSEEAILFLRKMQESG-LRPNAFSITVALSACAHLASLHIGRTIHGYI-IRNLQHSSL 581
Query: 189 LS--TCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEK 246
+S T L+ MY KCG ++ A VF + N+MI Y L+GN ++A+ L+ +E
Sbjct: 582 VSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEG 641
Query: 247 KGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVK 306
G KP++ T VLSAC HAG + + F + +++P +EHYG +VDLLA AG +
Sbjct: 642 VGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETE 701
Query: 307 NSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTY 366
+ LI+ + K C +EL + ++++L+E EP + G Y+ +SN Y
Sbjct: 702 KALRLIEEMPFK-PDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAY 760
Query: 367 AAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKY-FVKNYSVHRK 415
A +G WD+V ++R M++ KGL+K+ S + + E + FV N H +
Sbjct: 761 AVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTR 810
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 129/259 (49%), Gaps = 11/259 (4%)
Query: 24 VSYNSMIDGHVKNGETGAARKLFDEMPVRDVWN----WNCMIAGYVAVGDLEAANELFER 79
SY + KNGE A L EM R++ + ++ G V DL ++ R
Sbjct: 36 TSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHAR 95
Query: 80 -MPDRDVVSWNCMIDGCV-----RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFW 133
+ + D + N I+ + + + +A F+++ RNV SW +++ + R
Sbjct: 96 ILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCE 155
Query: 134 ECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCL 193
L F EM+E+ E P+ + +V AC L G VH ++ + ++ V +++ L
Sbjct: 156 GALMGFVEMLEN-EIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSL 214
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPND 253
MY KCG +D A VFDE+P RN V+WN++++GY +G E+A+ LF +M K+G +P
Sbjct: 215 ADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTR 274
Query: 254 ATFVCVLSACTHAGMVMEG 272
T LSA + G V EG
Sbjct: 275 VTVSTCLSASANMGGVEEG 293
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 165/327 (50%), Gaps = 21/327 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------PVRDV 54
MY G + DA +FD + V++N+++ G+V+NG+ A +LF +M P R V
Sbjct: 217 MYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTR-V 275
Query: 55 WNWNCMIA----GYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
C+ A G V G A + M + D + +++ +VG + A F+R
Sbjct: 276 TVSTCLSASANMGGVEEGKQSHAIAIVNGM-ELDNILGTSLLNFYCKVGLIEYAEMVFDR 334
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
M ++VV+WN +++ +V+ + + M ++M + + TL ++++A A L +
Sbjct: 335 MFEKDVVTWNLIISGYVQQGLVEDAIYMC-QLMRLEKLKYDCVTLATLMSAAARTENLKL 393
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G V + ++ + D++L++ ++ MY KCG++ A+ VFD ++++ WN+++ Y
Sbjct: 394 GKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAE 453
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
G +AL LF M+ +G PN T+ ++ + G V E F L + I P +
Sbjct: 454 SGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF-LQMQSSGIIPNLI 512
Query: 291 HYGCIVDLLARAGLVKN--SEELIKYV 315
+ +++ G+V+N SEE I ++
Sbjct: 513 SWTTMMN-----GMVQNGCSEEAILFL 534
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 228/430 (53%), Gaps = 14/430 (3%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM----PVRDVWNWNCMIAG 63
+S AR LF++ D+V +NSM G+ + LF E+ + D + + ++
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 64 YVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
LE +L + D +V +I+ +V A F+R+ VV +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
N+M+ + R E L +F EM + PNE TL+SVL++CA LG L +G W+H + K
Sbjct: 199 NAMITGYARRNRPNEALSLFREM-QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK 257
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
++ V ++T L+ M+ KCG++D A +F++M ++ +W++MI+ Y HG EK++
Sbjct: 258 KHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSML 317
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
+F M + +P++ TF+ +L+AC+H G V EG YF M + I P ++HYG +VDLL
Sbjct: 318 MFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLL 377
Query: 300 ARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPY 359
+RAG ++++ E I + + C++H + +L E V++R+ EL+ G Y
Sbjct: 378 SRAGNLEDAYEFIDKLPIS-PTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDY 436
Query: 360 IMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYF----VKNYSVHRK 415
++LSN YA +W+ V+ +R +++++ K S + + + ++F VK+ +
Sbjct: 437 VILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLH 496
Query: 416 RIMYSMLSEL 425
R + M+ EL
Sbjct: 497 RALDEMVKEL 506
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 126/307 (41%), Gaps = 22/307 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MY+ V AR +FD + +V YN+MI G+ + A LF EM + +
Sbjct: 173 MYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEIT 232
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVSW----NCMIDGCVRVGNVPLALEFFNRMP 112
+++ +G L+ + + + +ID + G++ A+ F +M
Sbjct: 233 LLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMR 292
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG- 171
++ +W++M+ + + + MF E M S P+E T + +L AC+H G++ G
Sbjct: 293 YKDTQAWSAMIVAYANHGKAEKSMLMF-ERMRSENVQPDEITFLGLLNACSHTGRVEEGR 351
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV-VSWNSMIMGYGL 230
+ + I + ++ + + G ++ A + D++P+ + W ++
Sbjct: 352 KYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSS 411
Query: 231 HGN---GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
H N EK E E++ D + L A + W Y D +R+V
Sbjct: 412 HNNLDLAEKVSERIFELDDS--HGGDYVILSNLYARN------KKWEYVDSLRKVMKDRK 463
Query: 288 KVEHYGC 294
V+ GC
Sbjct: 464 AVKVPGC 470
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 216/451 (47%), Gaps = 46/451 (10%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDL--EAANEL 76
+ D+V +++D + KNG A KLF MP ++V +N MI+G++ + ++ EA++E
Sbjct: 283 MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEA 342
Query: 77 FERMPD-----------------------------RDVVSWNC-------------MIDG 94
F+ D R + + C +I+
Sbjct: 343 FKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIEL 402
Query: 95 CVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT 154
+G+ ++ F +++ SW SM+ HV+ + +F ++ S P E T
Sbjct: 403 YALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSS-HIRPEEYT 461
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
+ +++ACA LS G + + + I + T ++MY K G M LA VF E+
Sbjct: 462 VSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ 521
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
+V ++++MI HG+ +AL +F M+ G KPN F+ VL AC H G+V +G
Sbjct: 522 NPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLK 581
Query: 275 YFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTT 334
YF M+ Y I P +H+ C+VDLL R G + ++E LI + C
Sbjct: 582 YFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQ-DHPVTWRALLSSCRV 640
Query: 335 HMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
+ DS +G+ VA+RL+ELEP G Y++L N Y G E VR ++R++G++KE A S
Sbjct: 641 YKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALS 700
Query: 395 VVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
+ + + + V + S +++Y+ML +
Sbjct: 701 WIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 140/287 (48%), Gaps = 48/287 (16%)
Query: 33 HVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELF--------------- 77
+ K E G AR+LFD MP R++ ++N +I+GY +G E A ELF
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 78 --------ERMP----------------DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
ER + V N +ID + G + A+ F+R
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA---HLGKLSV 170
R+ VSWNS+++ +VR + E L + +M G + A L SVL AC + G +
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYA-LGSVLKACCINLNEGFIEK 270
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
GM +H + ++ D+++ T LL MY K G++ A +F MP +NVV++N+MI G+
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 231 HGN-----GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+A +LF++M+++G +P+ +TF VL AC+ A + G
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYG 377
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%)
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
+ A G + +G H + +++ + L LL MY KC + AR +FD MP RN
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
++S+NS+I GY G E+A+ELFLE + K + T+ L C
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFC 158
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 226/433 (52%), Gaps = 11/433 (2%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM-PVRDVWNWNCMIAGYVA 66
VS A+ +F ++D+V + +MI G++ NG + ++F + V+ N +++
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450
Query: 67 VGDL-------EAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
+G L E + ++ D +ID + G + LA E F R+ R++VSW
Sbjct: 451 IGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSW 510
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
NSM+ ++ + + +F +M SG + ++ + L+ACA+L S G +H F+
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQMGVSGICY-DCVSISAALSACANLPSESFGKAIHGFMI 569
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
+++ DV + L+ MY KCG + A +VF M +N+VSWNS+I G HG + +L
Sbjct: 570 KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLC 629
Query: 240 LFLEM-EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDL 298
LF EM EK G +P+ TF+ ++S+C H G V EG +F M Y I+P+ EHY C+VDL
Sbjct: 630 LFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDL 689
Query: 299 LARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGP 358
RAG + + E +K + C H + EL E+ + +L++L+P + G
Sbjct: 690 FGRAGRLTEAYETVKSMPFP-PDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGY 748
Query: 359 YIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIM 418
Y+++SN +A W+ V +VR +++E+ +QK S + + + + + +
Sbjct: 749 YVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHI 808
Query: 419 YSMLSELGAHIKL 431
YS+L+ L ++L
Sbjct: 809 YSLLNSLLGELRL 821
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 152/326 (46%), Gaps = 10/326 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM----PVRDVWN 56
MYS GR DA LF D V++N MI G+V++G + F EM + D
Sbjct: 283 MYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAIT 342
Query: 57 WNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ ++ +LE ++ D+ + +ID + V +A F++
Sbjct: 343 FSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN 402
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+ +VV + +M++ ++ + + L+MF +++ + PNE TLVS+L L L +G
Sbjct: 403 SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKV-KISPNEITLVSILPVIGILLALKLGR 461
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H FI + ++ MY KCG M+LA ++F+ + R++VSWNSMI
Sbjct: 462 ELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSD 521
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
N A+++F +M G + + LSAC + G M + +++ V
Sbjct: 522 NPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSE 580
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVK 318
++D+ A+ G +K + + K + K
Sbjct: 581 STLIDMYAKCGNLKAAMNVFKTMKEK 606
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 127/275 (46%), Gaps = 17/275 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLV-----SYNSMIDGHVKNGETGAARKLFDEMPV---- 51
MY++ G SD +F LDL +NS+I V+NG A + +M
Sbjct: 79 MYAMCGSFSDCGKMF---YRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVS 135
Query: 52 RDVWNWNCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEF 107
DV + C++ VA+ + + + L + + D + + +I + G + + +
Sbjct: 136 PDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKL 195
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F+R+ ++ V WN ML + + + +K F +M + PN T VL+ CA
Sbjct: 196 FDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF-SVMRMDQISPNAVTFDCVLSVCASKLL 254
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
+ +G+ +H + + + + + LL+MY KCG D A +F M + V+WN MI G
Sbjct: 255 IDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISG 314
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
Y G E++L F EM G P+ TF +L +
Sbjct: 315 YVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 119/248 (47%), Gaps = 12/248 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNC- 59
MY+ GR++ A +F+ D+VS+NSMI ++ AA +F +M V + ++C
Sbjct: 485 MYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGIC-YDCV 543
Query: 60 -MIAGYVAVGDLEAANE-------LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
+ A A +L + + + + DV S + +ID + GN+ A+ F M
Sbjct: 544 SISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM 603
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
+N+VSWNS++A + L +F EM+E P++ T + ++++C H+G + G
Sbjct: 604 KEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEG 663
Query: 172 M-WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMIMGYG 229
+ + S + I+ C++ ++ + G + A + MP + W +++
Sbjct: 664 VRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACR 723
Query: 230 LHGNGEKA 237
LH N E A
Sbjct: 724 LHKNVELA 731
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
Query: 106 EFFNRMPAR--NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
+ F R+ R ++ WNS+++ VR + L + +M+ G + P+ +T ++ AC
Sbjct: 91 KMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVS-PDVSTFPCLVKACV 149
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
L ++ + S + + +++ L+ Y++ G +D+ +FD + ++ V WN
Sbjct: 150 ALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNV 209
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
M+ GY G + ++ F M PN TF CVLS C
Sbjct: 210 MLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCA 250
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
E +P +L+ L AC++ L G VH+F+ N+I D +L MY CG+
Sbjct: 32 ETIPRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDC 89
Query: 207 RDVFDEMPVR--NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
+F + +R ++ WNS+I + +G +AL + +M G P+ +TF C++ AC
Sbjct: 90 GKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 215/405 (53%), Gaps = 9/405 (2%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNW 57
Y+ G +S A+ +F + + S+N++I GH ++ + + +M + D +
Sbjct: 440 YAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 58 NCMIAGYVAVGDLEAANE----LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
+++ + L E + +RD+ + ++ + G + F+ M
Sbjct: 500 CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED 559
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
+++VSWN+++ +++ L +F +M+ G + +++ V AC+ L L +G
Sbjct: 560 KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG-ISMMPVFGACSLLPSLRLGRE 618
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
H++ + ++ D ++ L+ MY K G++ + VF+ + ++ SWN+MIMGYG+HG
Sbjct: 619 AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGL 678
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYG 293
++A++LF EM++ G P+D TF+ VL+AC H+G++ EG Y D M+ + ++P ++HY
Sbjct: 679 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYA 738
Query: 294 CIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEP 353
C++D+L RAG + + ++ + C H + E+GE VA +L ELEP
Sbjct: 739 CVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEP 798
Query: 354 MDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHL 398
Y++LSN YA G+W+DV +VR + E L+K+A S + L
Sbjct: 799 EKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIEL 843
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 138/279 (49%), Gaps = 14/279 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP-----VRDVW 55
MY++ G D+R +FD+ + +L +N++I + +N + F EM + D +
Sbjct: 129 MYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHF 188
Query: 56 NWNCMI---AGYVAVGDLEAANELFERMP-DRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
+ C+I AG VG A + L + DV N ++ G V AL+ F+ M
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMES---GEAVPNEATLVSVLTACAHLGKL 168
P RN+VSWNSM+ + E + EMME G +P+ ATLV+VL CA ++
Sbjct: 249 PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 308
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
+G VH + + +++L+ L+ MY KCG + A+ +F +NVVSWN+M+ G+
Sbjct: 309 GLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 368
Query: 229 GLHGNGEKALELFLEMEKKGP--KPNDATFVCVLSACTH 265
G+ ++ +M G K ++ T + + C H
Sbjct: 369 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 15/215 (6%)
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F+ + ++N+ WN++++ + R + + E L+ F EM+ + + +P+ T V+ ACA +
Sbjct: 143 FDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSD 202
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
+ +G+ VH + + DV + L++ Y G + A +FD MP RN+VSWNSMI
Sbjct: 203 VGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRV 262
Query: 228 YGLHGNGEKALELFLE-MEKKGPK---PNDATFVCVLSACTHA-----GMVMEGWWYFDL 278
+ +G E++ L E ME+ G P+ AT V VL C G + GW
Sbjct: 263 FSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAV--- 319
Query: 279 MRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
++ ++ ++D+ ++ G + N++ + K
Sbjct: 320 ---KLRLDKELVLNNALMDMYSKCGCITNAQMIFK 351
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 131/321 (40%), Gaps = 54/321 (16%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI----------A 62
L+ + L D+ N+++ + +G A +LFD MP R++ +WN MI
Sbjct: 212 LVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEE 271
Query: 63 GYVAVGDLEAANELFERMPD---------------------------------RDVVSWN 89
++ +G++ N MPD +++V N
Sbjct: 272 SFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNN 331
Query: 90 CMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV 149
++D + G + A F +NVVSWN+M+ + +M+ GE V
Sbjct: 332 ALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDV 391
Query: 150 -PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
+E T+++ + C H L +H + + L++ + Y KCG++ A+
Sbjct: 392 KADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQR 451
Query: 209 VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHA-- 266
VF + + V SWN++I G+ + +L+ L+M+ G P+ T +LSAC+
Sbjct: 452 VFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKS 511
Query: 267 --------GMVMEGWWYFDLM 279
G ++ W DL
Sbjct: 512 LRLGKEVHGFIIRNWLERDLF 532
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 131/268 (48%), Gaps = 23/268 (8%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWN-- 58
+Y G + + LFD+ LVS+N++I G+++NG A +F +M + +
Sbjct: 540 LYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGIS 599
Query: 59 -------CMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
C + + +G A L + D ++ + +ID + G++ + + FN +
Sbjct: 600 MMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACS-LIDMYAKNGSITQSSKVFNGL 658
Query: 112 PARNVVSWNSML---ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
++ SWN+M+ +H AK E +K+F+EM +G P++ T + VLTAC H G +
Sbjct: 659 KEKSTASWNAMIMGYGIHGLAK---EAIKLFEEMQRTGHN-PDDLTFLGVLTACNHSGLI 714
Query: 169 SVGMWVHSFIKSN-NIKVDVLLSTCLLTMYVKCGAMDLA-RDVFDEMPVR-NVVSWNSMI 225
G+ +KS+ +K ++ C++ M + G +D A R V +EM +V W S++
Sbjct: 715 HEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLL 774
Query: 226 MGYGLHGN---GEKALELFLEMEKKGPK 250
+H N GEK E+E + P+
Sbjct: 775 SSCRIHQNLEMGEKVAAKLFELEPEKPE 802
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 158 VLTACAHLGKLSVGMWVHSFIK-SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
+L A + +G +H + S ++ D +L T ++TMY CG+ D +R VFD + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEM-EKKGPKPNDATFVCVLSACTHAGM 268
N+ WN++I Y + ++ LE F+EM P+ T+ CV+ AC AGM
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC--AGM 200
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/413 (30%), Positives = 210/413 (50%), Gaps = 19/413 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV-WNWNC 59
MY G V+ +F+ ++V++ S+I G V N A + F EM V N
Sbjct: 151 MYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETI 210
Query: 60 MIAGYVAVGDLE---------------AANELFERMPDRDVVSWNCMIDGCVRVGNVPLA 104
M+ VA G + + F+ +V+ +ID + G++ A
Sbjct: 211 MVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTA 270
Query: 105 LEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
F+ MP R +VSWNS++ + + E L MF +M++ G A P++ T +SV+ A
Sbjct: 271 RYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA-PDKVTFLSVIRASMI 329
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSM 224
G +G +H+++ D + L+ MY K G + A+ F+++ ++ ++W +
Sbjct: 330 QGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVV 389
Query: 225 IMGYGLHGNGEKALELFLEMEKKG-PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVY 283
I+G HG+G +AL +F M++KG P+ T++ VL AC+H G+V EG YF MR ++
Sbjct: 390 IIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLH 449
Query: 284 NIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEI 343
+EP VEHYGC+VD+L+RAG + +E L+K + VK C H + EL +
Sbjct: 450 GLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVK-PNVNIWGALLNGCDIHENLELTDR 508
Query: 344 VAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
+ + E E + G Y++LSN YA GRW DV+ +R ++ K + K S V
Sbjct: 509 IRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSV 561
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 144/316 (45%), Gaps = 56/316 (17%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGET---GAARKLFDEMPVRDVWNWNCMIAGYVAVGD 69
L+ SS+ +++ + +ID ET AR +F+ + V+ WN MI GY +
Sbjct: 28 LMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPN 87
Query: 70 LEAANELFERM------PD--------------RDVVSWNCMIDGCVRV----------- 98
+ A ++ M PD RD+ +C+ V+
Sbjct: 88 PDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTC 147
Query: 99 --------GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
G V L F +P NVV+W S+++ V F + ++ F EM +G
Sbjct: 148 LLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNG-VKA 206
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIK--------SNNIKVDVLLSTCLLTMYVKCGA 202
NE +V +L AC + G W H F++ + + +V+L+T L+ MY KCG
Sbjct: 207 NETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGD 266
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
+ AR +FD MP R +VSWNS+I GY +G+ E+AL +FL+M G P+ TF+ V+ A
Sbjct: 267 LRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRA 326
Query: 263 -----CTHAGMVMEGW 273
C+ G + +
Sbjct: 327 SMIQGCSQLGQSIHAY 342
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 4/201 (1%)
Query: 83 RDVVSWNCMIDGCV---RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMF 139
R+V+ + +ID C N+ A F + +V WNSM+ + + + + L +
Sbjct: 36 RNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFY 95
Query: 140 DEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVK 199
EM+ G + P+ T VL AC+ L + G VH F+ +V++ +STCLL MY+
Sbjct: 96 QEMLRKGYS-PDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMC 154
Query: 200 CGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCV 259
CG ++ VF+++P NVV+W S+I G+ + A+E F EM+ G K N+ V +
Sbjct: 155 CGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDL 214
Query: 260 LSACTHAGMVMEGWWYFDLMR 280
L AC ++ G W+ ++
Sbjct: 215 LVACGRCKDIVTGKWFHGFLQ 235
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 192/371 (51%), Gaps = 10/371 (2%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L+ S D +S+ID + K GE G ARK+F ++ +D+ +N MI+GY +
Sbjct: 142 LVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADE 201
Query: 73 ANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP----ARNVVSWNSMLA 124
A L + M DV++WN +I G + N E M +VVSW S+++
Sbjct: 202 ALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIIS 261
Query: 125 LHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIK 184
V + F +M+ G PN AT++++L AC L + G +H + ++
Sbjct: 262 GLVHNFQNEKAFDAFKQMLTHG-LYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLE 320
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
+ + LL MY KCG + A +F + P + V++NSMI Y HG +KA+ELF +M
Sbjct: 321 DHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQM 380
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
E G K + TF +L+AC+HAG+ G F LM+ Y I P++EHY C+VDLL RAG
Sbjct: 381 EATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGK 440
Query: 305 VKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSN 364
+ + E+IK + ++ C H + EL I AK L ELEP + G ++L++
Sbjct: 441 LVEAYEMIKAMRME-PDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTS 499
Query: 365 TYAAQGRWDDV 375
YA G W+ V
Sbjct: 500 LYANAGSWESV 510
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 3/171 (1%)
Query: 96 VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATL 155
V G V A + F+ MP R++ M+ R + E L F EM + G + +A +
Sbjct: 62 VECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDG--LKLDAFI 119
Query: 156 V-SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
V S+L A +L G +H + + + D + + L+ MY K G + AR VF ++
Sbjct: 120 VPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLG 179
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH 265
+++V +N+MI GY + ++AL L +M+ G KP+ T+ ++S +H
Sbjct: 180 EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G +H+ + ++ I ++ L+T YV+CG + AR VFDEMP R++ MI
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 231 HGNGEKALELFLEMEKKGPK 250
+G +++L+ F EM K G K
Sbjct: 95 NGYYQESLDFFREMYKDGLK 114
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 182/326 (55%), Gaps = 10/326 (3%)
Query: 71 EAANELFERMPD-RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV----VSWNSMLAL 125
++A +F + D R+++SWN +I G + G A+E F ++ + + +WNS+++
Sbjct: 283 KSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISG 342
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV 185
+ E K F+ M+ S VP+ L S+L+AC+ + L G +H + +
Sbjct: 343 FSQLGKVIEAFKFFERML-SVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAER 401
Query: 186 DVLLSTCLLTMYVKCGAMDLARDVFD--EMPVRNVVSWNSMIMGYGLHGNGEKALELFLE 243
D+ + T L+ MY+KCG AR +FD E ++ V WN MI GYG HG E A+E+F
Sbjct: 402 DIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFEL 461
Query: 244 MEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
+ ++ +P+ ATF VLSAC+H G V +G F LM+ Y +P EH GC++DLL R+G
Sbjct: 462 LREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSG 521
Query: 304 LVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLS 363
++ ++E+I + C H+D LGE A +L ELEP + P+++LS
Sbjct: 522 RLREAKEVID--QMSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILS 579
Query: 364 NTYAAQGRWDDVERVRVMIREKGLQK 389
+ YAA RW+DVE +R +I +K L K
Sbjct: 580 SIYAALERWEDVESIRQVIDQKQLVK 605
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 186/405 (45%), Gaps = 18/405 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY +V+DA + D + S N+ + G ++NG A ++F + V +
Sbjct: 75 MYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVT 134
Query: 61 IAGYVA-VGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARN 115
+A + GD+E +L + + +V ++ R G LA F ++P ++
Sbjct: 135 VASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKS 194
Query: 116 VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVH 175
VV++N+ ++ + +F+ M + PN+ T V+ +TACA L L G +H
Sbjct: 195 VVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLH 254
Query: 176 SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP-VRNVVSWNSMIMGYGLHGNG 234
+ + + ++ T L+ MY KC A VF E+ RN++SWNS+I G ++G
Sbjct: 255 GLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQH 314
Query: 235 EKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGC 294
E A+ELF +++ +G KP+ AT+ ++S + G V+E + +F+ M V + P ++ C
Sbjct: 315 ETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV-PSLK---C 370
Query: 295 IVDLLARAG---LVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL 351
+ LL+ +KN +E+ +V +K +M L +
Sbjct: 371 LTSLLSACSDIWTLKNGKEIHGHV-IKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRF 429
Query: 352 EPMDIGPY---IMLSNTYAAQGRWDDVERVRVMIREKGLQKEAAS 393
EP P +M+S Y G + + ++RE+ ++ A+
Sbjct: 430 EPKPKDPVFWNVMISG-YGKHGECESAIEIFELLREEKVEPSLAT 473
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 55/114 (48%)
Query: 150 PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV 209
PN+ T +L +CA LG + G +H+ + VDV +T L++MY+K + A V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 210 FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
DEMP R + S N+ + G +G A +F + G N T VL C
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC 142
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 201 bits (511), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 128/392 (32%), Positives = 201/392 (51%), Gaps = 43/392 (10%)
Query: 45 LFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM-------PDR-------------- 83
+F MP R++++WN +I + G + +LF RM PD
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 84 -----DVVSWNCMIDGC--------------VRVGNVPLALEFFNRMPARNVVSWNSMLA 124
D++ C+ G V +G + A + F+ MP R+ V + +M
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 125 LHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIK 184
+V+ L MF EM SG A+ + +VS+L AC LG L G VH +
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFAL-DSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSC 267
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
+ + L + MYVKC +D A VF M R+V+SW+S+I+GYGL G+ + +LF EM
Sbjct: 268 LGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEM 327
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
K+G +PN TF+ VLSAC H G+V + W YF LM+ YNI P+++HY + D ++RAGL
Sbjct: 328 LKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAGL 386
Query: 305 VKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSN 364
++ +E+ ++ + VK C + + E+GE VA+ LI+L+P Y+ L+
Sbjct: 387 LEEAEKFLEDMPVK-PDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAG 445
Query: 365 TYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
Y+A GR+D+ E +R ++EK + K S +
Sbjct: 446 LYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%)
Query: 102 PLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
P +L F MP RN+ SWN ++ R+ + + +F M P++ TL +L A
Sbjct: 84 PTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRA 143
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
C+ + G +H + +S+ L+ MYV G + AR +FD+MPVR+ V +
Sbjct: 144 CSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLY 203
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+M GY G L +F EM G + V +L AC G + G
Sbjct: 204 TAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHG 254
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 118/284 (41%), Gaps = 28/284 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY G++ AR LFD D V Y +M G+V+ GE +F EM
Sbjct: 178 MYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGF-----A 232
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSW-------------NCMIDGCVRVGNVPLALEF 107
+ V V L A +L + V W N + D V+ + A
Sbjct: 233 LDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTV 292
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F M R+V+SW+S++ + K+FDEM++ G PN T + VL+ACAH G
Sbjct: 293 FVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEG-IEPNAVTFLGVLSACAHGGL 351
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIM 226
+ ++ NI ++ + + G ++ A ++MPV+ + +++
Sbjct: 352 VEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLS 411
Query: 227 GYGLHGN---GEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
G ++GN GE+ +++ KP A++ L+ A
Sbjct: 412 GCKVYGNVEVGERVARELIQL-----KPRKASYYVTLAGLYSAA 450
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 201 bits (511), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 199/425 (46%), Gaps = 48/425 (11%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D + N ++ +VK E ARKLFDEM +V +W +I+GY +G + A +F++M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 82 D----------------------------------------RDVVSWNCMIDGCVRVGNV 101
+ R++V + ++D + +V
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 102 PLALEFFNRMPA--RNVVSWNSML---ALHVRAKSFWECLKMFDEMMESGEAVPNEATLV 156
A F+ M RNVVSW SM+ A + R E + F+ + S A N+ L
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRA--NQFMLA 240
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
SV++AC+ LG+L G H + + + +++T LL MY KCG++ A +F +
Sbjct: 241 SVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCH 300
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF 276
+V+S+ SMIM HG GE A++LF EM PN T + VL AC+H+G+V EG Y
Sbjct: 301 SVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYL 360
Query: 277 DLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXX-XXXXXXCTTH 335
LM Y + P HY C+VD+L R G V + EL K + V H
Sbjct: 361 SLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLH 420
Query: 336 MDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSV 395
E+ +KRLI+ YI LSN YA G W+D E +R+ ++ G KE A S
Sbjct: 421 GRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSW 480
Query: 396 VHLED 400
+ +D
Sbjct: 481 IENKD 485
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
+H+ D L+ YVK ++ AR +FDEM NVVSW S+I GY G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 234 GEKALELFLEMEKKGP-KPNDATFVCVLSACT 264
+ AL +F +M + P PN+ TF V AC+
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACS 142
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 201 bits (511), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 197/418 (47%), Gaps = 41/418 (9%)
Query: 29 MIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVS- 87
+ID + K G+ A + +DV +W MIAGY + A F +M DR + S
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 88 --------------------------------------WNCMIDGCVRVGNVPLALEFFN 109
N ++ R G + + F
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE 650
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
+ A + ++WN++++ ++ + E L++F M G N T S + A + +
Sbjct: 651 QTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG-IDNNNFTFGSAVKAASETANMK 709
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
G VH+ I + + L++MY KCG++ A F E+ +N VSWN++I Y
Sbjct: 710 QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 769
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKV 289
HG G +AL+ F +M +PN T V VLSAC+H G+V +G YF+ M Y + PK
Sbjct: 770 KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 829
Query: 290 EHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
EHY C+VD+L RAGL+ ++E I+ + +K C H + E+GE A L+
Sbjct: 830 EHYVCVVDMLTRAGLLSRAKEFIQEMPIK-PDALVWRTLLSACVVHKNMEIGEFAAHHLL 888
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFV 407
ELEP D Y++LSN YA +WD + R ++EKG++KE S + +++ ++V
Sbjct: 889 ELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYV 946
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 140/335 (41%), Gaps = 41/335 (12%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L+ + D N+++ + G +A +F M RD +N +I G G E
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 372
Query: 73 ANELFERM------PDRDVVSW---NCMIDGCV--------------------------- 96
A ELF+RM PD + ++ C DG +
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLN 432
Query: 97 ---RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA 153
+ ++ AL++F NVV WN ML + ++F +M + E VPN+
Sbjct: 433 LYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM-QIEEIVPNQY 491
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM 213
T S+L C LG L +G +HS I N +++ + + L+ MY K G +D A D+
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 214 PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGW 273
++VVSW +MI GY + +KAL F +M +G + ++ +SAC + EG
Sbjct: 552 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG- 610
Query: 274 WYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNS 308
V + +V L +R G ++ S
Sbjct: 611 QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 47/312 (15%)
Query: 6 GRVSDARLLFDSSLTLDLVS----YNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
G + + R L L L L S + D ++ G+ A K+FDEMP R ++ WN MI
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158
Query: 62 ---------------------------------------AGYVAVGDLEA--ANELFERM 80
G VA +E A L++ +
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 81 PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
D VV N +ID R G V LA F+ + ++ SW +M++ + + E +++F
Sbjct: 219 RDSTVVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFC 277
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
+M G +P SVL+AC + L +G +H + D + L+++Y
Sbjct: 278 DMYVLG-IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 336
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
G + A +F M R+ V++N++I G G GEKA+ELF M G +P+ T ++
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Query: 261 SACTHAGMVMEG 272
AC+ G + G
Sbjct: 397 VACSADGTLFRG 408
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 143/313 (45%), Gaps = 14/313 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WN 56
+YS G V AR +FD D S+ +MI G KN A +LF +M V + +
Sbjct: 231 LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290
Query: 57 WNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ +++ + LE +L + D N ++ +GN+ A F+ M
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R+ V++N+++ + + +++F M G P+ TL S++ AC+ G L G
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG-LEPDSNTLASLVVACSADGTLFRGQ 409
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H++ + + LL +Y KC ++ A D F E V NVV WN M++ YGL
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
+ + +F +M+ + PN T+ +L C G + G + ++ ++ Y
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE---QIHSQIIKTNFQLNAY 526
Query: 293 GC--IVDLLARAG 303
C ++D+ A+ G
Sbjct: 527 VCSVLIDMYAKLG 539
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 223/409 (54%), Gaps = 17/409 (4%)
Query: 2 YSVFGRVSDARLLFDS-SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW-NWNC 59
Y V G++SDAR +FD ++D V+++++++G+++ + A LF M +V N +
Sbjct: 170 YCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVST 229
Query: 60 MIAGYVAVGDL------EAANELFERMP-DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+++ A+ DL E+A+ L ++ D D+ +I + G + A F+
Sbjct: 230 LLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAI 289
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
++VV+WN M+ + + EC+ + +M + + PN +T V +L++CA+ VG
Sbjct: 290 RKDVVTWNCMIDQYAKTGLLEECVWLLRQM-KYEKMKPNSSTFVGLLSSCAYSEAAFVGR 348
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
V ++ I +D +L T L+ MY K G ++ A ++F+ M ++V SW +MI GYG HG
Sbjct: 349 TVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHG 408
Query: 233 NGEKALELFLEMEKKGPK--PNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
+A+ LF +ME++ K PN+ TF+ VL+AC+H G+VMEG F M Y+ PKVE
Sbjct: 409 LAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVE 468
Query: 291 HYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIE 350
HYGC+VDLL RAG ++ + ELI+ + + C + +++LGE V RL E
Sbjct: 469 HYGCVVDLLGRAGQLEEAYELIRNLPI-TSDSTAWRALLAACRVYGNADLGESVMMRLAE 527
Query: 351 LEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLE 399
+ I+L+ T+A G + E+ KG +KEA S + +E
Sbjct: 528 MGETHPADAILLAGTHAVAG---NPEKSLDNELNKG-RKEAGYSAIEIE 572
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 132/279 (47%), Gaps = 18/279 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY G +S AR +FD ++ D+V++N MID + K G L +M + +
Sbjct: 271 MYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSST 330
Query: 61 IAGYVA---------VGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
G ++ VG A+ L E D + ++D +VG + A+E FNRM
Sbjct: 331 FVGLLSSCAYSEAAFVGR-TVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRM 389
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV-PNEATLVSVLTACAHLGKLSV 170
++V SW +M++ + E + +F++M E V PNE T + VL AC+H G +
Sbjct: 390 KDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVME 449
Query: 171 GM-WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMIMGY 228
G+ +++ + V C++ + + G ++ A ++ +P+ + +W +++
Sbjct: 450 GIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAAC 509
Query: 229 GLHGNGEKALELFLEMEKKG-PKPNDATFVCVLSACTHA 266
++GN + + + + + G P DA +L A THA
Sbjct: 510 RVYGNADLGESVMMRLAEMGETHPADA----ILLAGTHA 544
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 2/169 (1%)
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
++ A F + N+ +N+M+ + + +F+++ G + + + ++ L
Sbjct: 74 DIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTL-DRFSFITTL 132
Query: 160 TACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NV 218
+C+ +S+G +H + V L L+ Y CG + AR VFDEMP +
Sbjct: 133 KSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDA 192
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
V++++++ GY AL+LF M K N +T + LSA + G
Sbjct: 193 VTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLG 241
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/447 (30%), Positives = 215/447 (48%), Gaps = 61/447 (13%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L SSL+LD+ N+ ID + K A ++FDEM RD +WN +IA + G
Sbjct: 407 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYE 466
Query: 73 ANELFERM------PDR-----------------------------------------DV 85
LF M PD D+
Sbjct: 467 TLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDM 526
Query: 86 VSWNCMIDGCVRV-------GNVPLALEFFNRMPARNV----VSWNSMLALHVRAKSFWE 134
S MI+ ++ NV +E +M + + VSWNS+++ +V + +
Sbjct: 527 YSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSED 586
Query: 135 CLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLL 194
+F MME G P++ T +VL CA+L +G +H+ + ++ DV + + L+
Sbjct: 587 AQMLFTRMMEMG-ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLV 645
Query: 195 TMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDA 254
MY KCG + +R +F++ R+ V+WN+MI GY HG GE+A++LF M + KPN
Sbjct: 646 DMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHV 705
Query: 255 TFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKY 314
TF+ +L AC H G++ +G YF +M+R Y ++P++ HY +VD+L ++G VK + ELI+
Sbjct: 706 TFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIRE 765
Query: 315 VSVKXXXXXXXXXXXXXCTTHMDS-ELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWD 373
+ + CT H ++ E+ E L+ L+P D Y +LSN YA G W+
Sbjct: 766 MPFE-ADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWE 824
Query: 374 DVERVRVMIREKGLQKEAASSVVHLED 400
V +R +R L+KE S V L+D
Sbjct: 825 KVSDLRRNMRGFKLKKEPGCSWVELKD 851
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 141/307 (45%), Gaps = 40/307 (13%)
Query: 11 ARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDL 70
A ++FD D+VS+N MI+G+ K+ + A F+ MPVRDV +WN M++GY+ G+
Sbjct: 102 ASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGES 161
Query: 71 EAANELFERMP---------------------------------------DRDVVSWNCM 91
+ E+F M D DVV+ + +
Sbjct: 162 LKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASAL 221
Query: 92 IDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPN 151
+D + +L F +P +N VSW++++A V+ LK F EM + V +
Sbjct: 222 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV-S 280
Query: 152 EATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFD 211
++ SVL +CA L +L +G +H+ ++ D ++ T L MY KC M A+ +FD
Sbjct: 281 QSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFD 340
Query: 212 EMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
N S+N+MI GY +G KAL LF + G ++ + V AC + E
Sbjct: 341 NSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 400
Query: 272 GWWYFDL 278
G + L
Sbjct: 401 GLQIYGL 407
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 1/207 (0%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
NC++ Y D +A+ +F++MP RDVVSWN MI+G + ++ A FFN MP R+VV
Sbjct: 87 NCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVV 146
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
SWNSML+ +++ + +++F +M G T +L C+ L S+GM +H
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGR-TFAIILKVCSFLEDTSLGMQIHGI 205
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
+ DV+ ++ LL MY K + VF +P +N VSW+++I G + A
Sbjct: 206 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 265
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACT 264
L+ F EM+K + + + VL +C
Sbjct: 266 LKFFKEMQKVNAGVSQSIYASVLRSCA 292
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 149/340 (43%), Gaps = 39/340 (11%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLF----------DEMP 50
MY+ + DA++LFD+S L+ SYN+MI G+ + A LF DE+
Sbjct: 325 MYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEIS 384
Query: 51 VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+ V+ ++ G L+ + DV N ID + + A F+
Sbjct: 385 LSGVFRACALVKGLSE--GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDE 442
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
M R+ VSWN+++A H + +E L +F M+ S P+E T S+L AC G L
Sbjct: 443 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS-RIEPDEFTFGSILKACTG-GSLGY 500
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NV----------- 218
GM +HS I + + + + L+ MY KCG ++ A + R NV
Sbjct: 501 GMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMH 560
Query: 219 --------VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVM 270
VSWNS+I GY + E A LF M + G P+ T+ VL C +
Sbjct: 561 NKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAG 620
Query: 271 EGWWYFDLMRRVYNIEPKVEHYGC--IVDLLARAGLVKNS 308
G + +V E + + Y C +VD+ ++ G + +S
Sbjct: 621 LGK---QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDS 657
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 154/325 (47%), Gaps = 23/325 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ R ++ +F + VS++++I G V+N A K F EM + +
Sbjct: 224 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 283
Query: 61 IAGYV----AVGDLEAANELFERMPDRDVVSWNCMIDGCVRVG---------NVPLALEF 107
A + A+ +L +L D + DG VR N+ A
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAA-----DGIVRTATLDMYAKCDNMQDAQIL 338
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F+ N S+N+M+ + + + ++ L +F +M SG +E +L V ACA +
Sbjct: 339 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGF-DEISLSGVFRACALVKG 397
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
LS G+ ++ +++ +DV ++ + MY KC A+ A VFDEM R+ VSWN++I
Sbjct: 398 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
+ +G G + L LF+ M + +P++ TF +L ACT + + +++
Sbjct: 458 HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNS 517
Query: 288 KVEHYGC-IVDLLARAGLVKNSEEL 311
V GC ++D+ ++ G+++ +E++
Sbjct: 518 SV---GCSLIDMYSKCGMIEEAEKI 539
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 91/227 (40%), Gaps = 49/227 (21%)
Query: 113 ARNVVSWNSMLALHV---RAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
R+VVS+N L + R SF F + + +V V CA G L
Sbjct: 11 TRSVVSFNRCLTEKISYRRVPSF----SYFTDFLNQVNSVST-TNFSFVFKECAKQGALE 65
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYV------------------------------- 198
+G H+ + + + + CLL +Y
Sbjct: 66 LGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYS 125
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
K M A F+ MPVR+VVSWNSM+ GY +G K++E+F++M ++G + + TF
Sbjct: 126 KSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAI 185
Query: 259 VLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
+L C+ G ++ RV GC D++A + L+
Sbjct: 186 ILKVCSFLEDTSLGMQIHGIVVRV----------GCDTDVVAASALL 222
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 112/266 (42%), Gaps = 51/266 (19%)
Query: 10 DARLLF----DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMI 61
DA++LF + +T D +Y +++D G +++ ++ + DV+ + ++
Sbjct: 586 DAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLV 645
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
Y GDL + +FE+ RD V+WN MI G G A++ F RM N+
Sbjct: 646 DMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENI----- 700
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
PN T +S+L ACAH+G + G+ +K +
Sbjct: 701 ---------------------------KPNHVTFISILRACAHMGLIDKGLEYFYMMKRD 733
Query: 182 -NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN----GE 235
+ + + ++ + K G + A ++ EMP + V W +++ +H N E
Sbjct: 734 YGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAE 793
Query: 236 KALELFLEMEKKGPKPNDATFVCVLS 261
+A L ++ P D++ +LS
Sbjct: 794 EATAALLRLD-----PQDSSAYTLLS 814
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 12/136 (8%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW----N 56
MYS G + D+RL+F+ SL D V++N+MI G+ +G+ A +LF+ M + ++
Sbjct: 647 MYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVT 706
Query: 57 WNCMIAGYVAVGDLEAANELFERMP-----DRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
+ ++ +G ++ E F M D + ++ M+D + G V ALE M
Sbjct: 707 FISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREM 766
Query: 112 P--ARNVVSWNSMLAL 125
P A +V+ W ++L +
Sbjct: 767 PFEADDVI-WRTLLGV 781
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 207/431 (48%), Gaps = 42/431 (9%)
Query: 16 DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANE 75
DS + V+ S++ ++G+ R++F +P V WN M++GY E A
Sbjct: 343 DSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAIS 402
Query: 76 LFERM------PDRDVVS---WNC----MIDGCVRVGNVPLALE---------------- 106
F +M PD+ +S +C ++G ++ V + E
Sbjct: 403 NFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYS 462
Query: 107 -----------FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATL 155
F + + ++ WNSM++ + L +F M ++ PNE +
Sbjct: 463 ECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSF 522
Query: 156 VSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV 215
+VL++C+ L L G H + + D + T L MY KCG +D AR FD +
Sbjct: 523 ATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLR 582
Query: 216 RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWY 275
+N V WN MI GYG +G G++A+ L+ +M G KP+ TFV VL+AC+H+G+V G
Sbjct: 583 KNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEI 642
Query: 276 FDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTH 335
M+R++ IEP+++HY CIVD L RAG ++++E+L + K C H
Sbjct: 643 LSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYK-SSSVLWEILLSSCRVH 701
Query: 336 MDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS- 394
D L VA++L+ L+P Y++LSNTY++ +WDD ++ ++ + + K S
Sbjct: 702 GDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 761
Query: 395 VVHLEDFESKY 405
+ D +S +
Sbjct: 762 TTYGNDLDSGF 772
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 153/311 (49%), Gaps = 14/311 (4%)
Query: 12 RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLE 71
RL F L L+ NS+++ + KN + A +F EMP +V +WN MI G+ +
Sbjct: 277 RLGFGGDLHLN----NSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSD 332
Query: 72 AANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHV 127
+ E RM D + V+ ++ C R G+V F+ +P +V +WN+ML+ +
Sbjct: 333 KSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYS 392
Query: 128 RAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDV 187
+ + E + F + M+ P++ TL +L++CA L L G +H + I +
Sbjct: 393 NYEHYEEAISNFRQ-MQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNS 451
Query: 188 LLSTCLLTMYVKCGAMDLARDVFDE-MPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEK 246
+ + L+ +Y +C M+++ +FD+ + ++ WNSMI G+ + KAL LF M +
Sbjct: 452 HIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQ 511
Query: 247 KGPK-PNDATFVCVLSACTHAGMVMEGWWYFDL-MRRVYNIEPKVEHYGCIVDLLARAGL 304
PN+ +F VLS+C+ ++ G + L ++ Y + VE + D+ + G
Sbjct: 512 TAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVET--ALTDMYCKCGE 569
Query: 305 VKNSEELIKYV 315
+ ++ + V
Sbjct: 570 IDSARQFFDAV 580
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 57/327 (17%)
Query: 11 ARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDL 70
AR +FD D+ S+N+ + K G+ G A ++FD MP RDV +WN MI+ V G
Sbjct: 60 ARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFE 119
Query: 71 EAANELFERM------PDR---------------DVVSWNCM-------IDGCVRVGNVP 102
E A +++RM P R V C +D + VGN
Sbjct: 120 EKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNAL 179
Query: 103 LAL------------EFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
L++ F + N VS+ +++ R E ++MF M E G V
Sbjct: 180 LSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQV- 238
Query: 151 NEATLVSVLT------ACAHLGKL---SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
+ L ++L+ C L ++ +G +H D+ L+ LL +Y K
Sbjct: 239 DSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNK 298
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
M+ A +F EMP NVVSWN MI+G+G +K++E M G +PN+ T + VL
Sbjct: 299 DMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLG 358
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPK 288
AC +G V G RR+++ P+
Sbjct: 359 ACFRSGDVETG-------RRIFSSIPQ 378
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 112/210 (53%), Gaps = 2/210 (0%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
D + N ++ Y+ GD + A ++F+ M RDV SWN + +VG++ A E F+ MP
Sbjct: 40 DTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMP 99
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R+VVSWN+M+++ VR + L ++ M+ G +P+ TL SVL+AC+ + GM
Sbjct: 100 ERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDG-FLPSRFTLASVLSACSKVLDGVFGM 158
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCG-AMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
H + ++ + LL+MY KCG +D VF+ + N VS+ ++I G
Sbjct: 159 RCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARE 218
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+A+++F M +KG + + +LS
Sbjct: 219 NKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 57/129 (44%), Gaps = 32/129 (24%)
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR---------- 216
KLS G +H FI +K D L LL +Y++CG D AR VFDEM VR
Sbjct: 22 KLS-GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLT 80
Query: 217 ---------------------NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDAT 255
+VVSWN+MI G EKAL ++ M G P+ T
Sbjct: 81 FRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFT 140
Query: 256 FVCVLSACT 264
VLSAC+
Sbjct: 141 LASVLSACS 149
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 220/435 (50%), Gaps = 17/435 (3%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMI 61
G + DA LF + D VS+ +MI G +NG A + F EM V+ D + + ++
Sbjct: 219 GMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 62 AGYVAVGDLEAANELFE------RMPDRD-VVSWNCMIDGCVRVGNVPLALEFFNRMPAR 114
A G L A NE + R +D + + +ID + + A F+RM +
Sbjct: 278 P---ACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 334
Query: 115 NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV 174
NVVSW +M+ + + E +K+F +M SG P+ TL ++ACA++ L G
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG-IDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 175 HSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNG 234
H ++ + V +S L+T+Y KCG +D + +F+EM VR+ VSW +M+ Y G
Sbjct: 394 HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRA 453
Query: 235 EKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGC 294
+ ++LF +M + G KP+ T V+SAC+ AG+V +G YF LM Y I P + HY C
Sbjct: 454 VETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSC 513
Query: 295 IVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPM 354
++DL +R+G ++ + I + C + E+G+ A+ LIEL+P
Sbjct: 514 MIDLFSRSGRLEEAMRFINGMPFP-PDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPH 572
Query: 355 DIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHR 414
Y +LS+ YA++G+WD V ++R +REK ++KE S + + + + S
Sbjct: 573 HPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPY 632
Query: 415 KRIMYSMLSELGAHI 429
+Y+ L EL I
Sbjct: 633 LDQIYAKLEELNNKI 647
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 116/277 (41%), Gaps = 61/277 (22%)
Query: 26 YNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDV 85
YN+++ + + AR++FD +P ++++WN ++ Y G + FE++PDRD
Sbjct: 44 YNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDG 103
Query: 86 VSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMES 145
V+WN +I+G G V A +K ++ MM
Sbjct: 104 VTWNVLIEGYSLSGLVGAA-------------------------------VKAYNTMMRD 132
Query: 146 GEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDL 205
A TL+++L + G +S+G +H + + +L+ + LL MY G +
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192
Query: 206 ARDVFDEMPVRNV------------------------------VSWNSMIMGYGLHGNGE 235
A+ VF + RN VSW +MI G +G +
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAK 252
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+A+E F EM+ +G K + F VL AC G + EG
Sbjct: 253 EAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/262 (40%), Positives = 157/262 (59%), Gaps = 2/262 (0%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
DV+ N ++ Y G ++ ++F++MP R +VSW M+ G V + A FN+MP
Sbjct: 153 DVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMP 212
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
RNVVSW +M+ +V+ + E ++F M + + PNE T+V++L A LG LS+G
Sbjct: 213 MRNVVSWTAMITAYVKNRRPDEAFQLFRRM-QVDDVKPNEFTIVNLLQASTQLGSLSMGR 271
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
WVH + N +D L T L+ MY KCG++ AR VFD M +++ +WNSMI G+HG
Sbjct: 272 WVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHG 331
Query: 233 NGEKALELFLEMEKKGP-KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
GE+AL LF EME++ +P+ TFV VLSAC + G V +G YF M +VY I P EH
Sbjct: 332 CGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREH 391
Query: 292 YGCIVDLLARAGLVKNSEELIK 313
C++ LL +A V+ + L++
Sbjct: 392 NACMIQLLEQALEVEKASNLVE 413
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 37/213 (17%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSML-ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
G A FN++ + + +WN M+ +L V K E L +F MM S ++ ++ T
Sbjct: 66 GETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKP-REALLLFILMMISHQSQFDKFTFPF 124
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
V+ AC + +G VH DV L+ +Y KCG D R VFD+MP R+
Sbjct: 125 VIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRS 184
Query: 218 VVSWNSMIMGYGLHGNGE---------------------------------KALELFLEM 244
+VSW +M+ YGL N + +A +LF M
Sbjct: 185 IVSWTTML--YGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRM 242
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
+ KPN+ T V +L A T G + G W D
Sbjct: 243 QVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHD 275
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 45/214 (21%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y G+ R +FD +VS+ +M+ G V N + +A +F++MP+R+V +W M
Sbjct: 163 LYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAM 222
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVS----------------------W---------- 88
I YV + A +LF RM DV W
Sbjct: 223 ITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGF 282
Query: 89 -------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM---LALHVRAKSFWECLKM 138
+ID + G++ A + F+ M +++ +WNSM L +H + E L +
Sbjct: 283 VLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGE---EALSL 339
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
F+EM E P+ T V VL+ACA+ G + G+
Sbjct: 340 FEEMEEEASVEPDAITFVGVLSACANTGNVKDGL 373
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 220/414 (53%), Gaps = 15/414 (3%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLF----------DEMPVRDVWNWNCMIAGYVAVGDLE 71
DL+S+ ++I G+ +N A +LF DEM + + + ++ + V ++
Sbjct: 451 DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIH 510
Query: 72 AANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKS 131
R D V N ++D + N+ A F + ++VVSW SM++ +
Sbjct: 511 CH---ILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGN 567
Query: 132 FWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLST 191
E +++F M+E+G + + L+ +L+A A L L+ G +H ++ ++ ++
Sbjct: 568 ESEAVELFRRMVETGLSA-DSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV 626
Query: 192 CLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKP 251
++ MY CG + A+ VFD + + ++ + SMI YG+HG G+ A+ELF +M + P
Sbjct: 627 AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSP 686
Query: 252 NDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
+ +F+ +L AC+HAG++ EG + +M Y +EP EHY C+VD+L RA V + E
Sbjct: 687 DHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEF 746
Query: 312 IKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGR 371
+K + + C +H + E+GEI A+RL+ELEP + G +++SN +A QGR
Sbjct: 747 VKMMKTE-PTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGR 805
Query: 372 WDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
W+DVE+VR ++ G++K S + ++ K+ ++ S + +Y LSE+
Sbjct: 806 WNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEV 859
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 179/386 (46%), Gaps = 34/386 (8%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WN 56
MY G + DA +FD ++N+MI +V NGE +A L+ M V V +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRV----GNVPLALEFFNRMP 112
+ ++ + D+ + +EL + S +++ V + ++ A F+
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 113 AR-NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
+ + V WNS+L+ + + E L++F EM +G A PN T+VS LTAC +G
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPA-PNSYTIVSALTACDGFSYAKLG 303
Query: 172 MWVH-SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
+H S +KS+ ++ + L+ MY +CG M A + +M +VV+WNS+I GY
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSAC-----------THAGMVMEGWWYFDLM 279
+ ++ALE F +M G K ++ + +++A HA ++ GW D
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW---DSN 420
Query: 280 RRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDS- 338
+V N + + + RA L + ++LI + +V C H+++
Sbjct: 421 LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTV------IAGYAQNDC--HVEAL 472
Query: 339 ELGEIVAKRLIELEPMDIGPYIMLSN 364
EL VAK+ +E++ M +G + S+
Sbjct: 473 ELFRDVAKKRMEIDEMILGSILRASS 498
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 150 PNEATLVSVLTACAHLGKLSVGMWVHS--FIKSNNIKVDVLLSTCLLTMYVKCGAMDLAR 207
P EA VL C +S G +HS F + ++D L L+ MY KCG++D A
Sbjct: 79 PVEA-FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK-LVFMYGKCGSLDDAE 136
Query: 208 DVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
VFDEMP R +WN+MI Y +G AL L+ M +G ++F +L AC
Sbjct: 137 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACA 193
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 183/369 (49%), Gaps = 2/369 (0%)
Query: 64 YVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML 123
Y G L +A +F+ + ++ +SW M+ G + G ALE F +P +N+ SW +++
Sbjct: 150 YAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALI 209
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNI 183
+ V++ E +F EM + + L S++ ACA+L G VH + +
Sbjct: 210 SGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGF 269
Query: 184 KVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLE 243
V +S L+ MY KC + A+D+F M R+VVSW S+I+G HG EKAL L+ +
Sbjct: 270 DSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDD 329
Query: 244 MEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
M G KPN+ TFV ++ AC+H G V +G F M + Y I P ++HY C++DLL R+G
Sbjct: 330 MVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSG 389
Query: 304 LVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI-ELEPMDIGPYIML 362
L+ +E LI + C ++G +A L+ + D YI+L
Sbjct: 390 LLDEAENLIHTMPFP-PDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILL 448
Query: 363 SNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSML 422
SN YA+ W V R + E ++K+ S V + ++ S K ++ +L
Sbjct: 449 SNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLL 508
Query: 423 SELGAHIKL 431
+L +++
Sbjct: 509 KKLEEEMRI 517
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 128/282 (45%), Gaps = 43/282 (15%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ G ++ A+ +FDS + +S+ +M+ G+ K+G A +LF +PV+++++W +
Sbjct: 149 MYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTAL 208
Query: 61 IAGYVAVGDLEAANELFERMP--------------------------------------- 81
I+G+V G A +F M
Sbjct: 209 ISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALG 268
Query: 82 -DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
D V N +ID + +V A + F+RM R+VVSW S++ + + L ++D
Sbjct: 269 FDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYD 328
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV-HSFIKSNNIKVDVLLSTCLLTMYVK 199
+M+ G PNE T V ++ AC+H+G + G + S K I+ + TCLL + +
Sbjct: 329 DMVSHG-VKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGR 387
Query: 200 CGAMDLARDVFDEMPV-RNVVSWNSMIMGYGLHGNGEKALEL 240
G +D A ++ MP + +W +++ G G+ + +
Sbjct: 388 SGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 101/193 (52%), Gaps = 4/193 (2%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
N +++ + G AL+ F+ MP R+ ++W S+L +A + L +F + S
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 149 VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
P++ +++ ACA+LG + G VH + D ++ + L+ MY KCG ++ A+
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 209 VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGM 268
VFD + V+N +SW +M+ GY G E+ALELF + P N ++ ++S +G
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRIL----PVKNLYSWTALISGFVQSGK 217
Query: 269 VMEGWWYFDLMRR 281
+E + F MRR
Sbjct: 218 GLEAFSVFTEMRR 230
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 4/162 (2%)
Query: 159 LTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
L CA L+ +H+ I I L+ L+ +Y KCGA A VFDEMP R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 219 VSWNSMIMGYGLHG-NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW-YF 276
++W S++ +G+ G +P+D F ++ AC + G + G +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 277 DLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+ Y + V+ +VD+ A+ GL+ +++ + + VK
Sbjct: 130 HFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK 169
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 210/409 (51%), Gaps = 9/409 (2%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNW-----NCMIAGYVAVG 68
+ +S D +++S+++ + ++ + +++ W+ N +++ Y +G
Sbjct: 195 MLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLG 254
Query: 69 DLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVR 128
+ A E + VSWN +ID C+++G ALE F+ P +N+V+W +M+ + R
Sbjct: 255 SRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGR 314
Query: 129 AKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVL 188
+ L+ F EMM+SG + +VL AC+ L L G +H + +
Sbjct: 315 NGDGEQALRFFVEMMKSG-VDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAY 373
Query: 189 LSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
+ L+ +Y KCG + A F ++ +++VSWN+M+ +G+HG ++AL+L+ M G
Sbjct: 374 VGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASG 433
Query: 249 PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNS 308
KP++ TF+ +L+ C+H+G+V EG F+ M + Y I +V+H C++D+ R G + +
Sbjct: 434 IKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEA 493
Query: 309 EELIKYVS---VKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNT 365
++L S C+TH +ELG V+K L EP + +++LSN
Sbjct: 494 KDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNL 553
Query: 366 YAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHR 414
Y + GRW + E VR + E+G++K S + + + S + V + S R
Sbjct: 554 YCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPR 602
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 123/302 (40%), Gaps = 67/302 (22%)
Query: 5 FGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPV--RDVWNWNCMIA 62
FGR + L+ S L NS+ID + K +T +A K+F +M R+ W ++
Sbjct: 88 FGRKIQS-LVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLF 146
Query: 63 GYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
Y+ EAA ++F MP R +WN MI G
Sbjct: 147 AYMNAEQFEAALDVFVEMPKRVAFAWNIMISG---------------------------- 178
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC-AHLGKLSVGMWVHSFIKSN 181
H CL +F EM+ES E P+ T S++ AC A + G VH+ + N
Sbjct: 179 ---HAHCGKLESCLSLFKEMLES-EFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN 234
Query: 182 NIKVDVLLSTCLLTMYVKCGAMD-------------------------------LARDVF 210
V +L+ Y K G+ D A +VF
Sbjct: 235 GWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVF 294
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVM 270
P +N+V+W +MI GYG +G+GE+AL F+EM K G + + VL AC+ ++
Sbjct: 295 HLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLG 354
Query: 271 EG 272
G
Sbjct: 355 HG 356
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 124/288 (43%), Gaps = 52/288 (18%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
Y+ G DA +S L VS+NS+ID +K GET A ++F P +++ W M
Sbjct: 249 FYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTM 308
Query: 61 IAGYVAVGDLEAANELFERM----PDRDVVSWNC---------------MIDGCV----- 96
I GY GD E A F M D D ++ MI GC+
Sbjct: 309 ITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGF 368
Query: 97 ---------------RVGNVPLALEFFNRMPARNVVSWNSML---ALHVRAKSFWECLKM 138
+ G++ A F + +++VSWN+ML +H A + LK+
Sbjct: 369 QGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLAD---QALKL 425
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVG-MWVHSFIKSNNIKVDVLLSTCLLTMY 197
+D M+ SG P+ T + +LT C+H G + G M S +K I ++V TC++ M+
Sbjct: 426 YDNMIASG-IKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMF 484
Query: 198 VKCGAMDLARDVFDEMP-----VRNVVSWNSMIMGYGLHGNGEKALEL 240
+ G + A+D+ N SW +++ H + E E+
Sbjct: 485 GRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREV 532
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 46/227 (20%)
Query: 92 IDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPN 151
I + G + A + F+ MP + V+WN+ML + R E + +F ++ S +A P+
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS-DAKPD 69
Query: 152 EATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG---------- 201
+ + ++L+ CA LG + G + S + + + ++ L+ MY KC
Sbjct: 70 DYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFR 129
Query: 202 -----------------------AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
+ A DVF EMP R +WN MI G+ G E L
Sbjct: 130 DMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCL 189
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACT------------HAGMVMEGW 273
LF EM + KP+ TF +++AC+ HA M+ GW
Sbjct: 190 SLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGW 236
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 225/443 (50%), Gaps = 12/443 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRD-VWNWNC 59
MYS+ +A + D DL ++S + G+++ G + + D VWN
Sbjct: 180 MYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLT 239
Query: 60 MIAG---YVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ + + DL A ++ RM + +V + +I+ + G V A F+
Sbjct: 240 YLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTH 299
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
A+N+ +++ + + KSF E L +F +M ++ E PNE T +L + A L L G
Sbjct: 300 AQNIFLNTTIMDAYFQDKSFEEALNLFSKM-DTKEVPPNEYTFAILLNSIAELSLLKQGD 358
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H + + + V++ L+ MY K G+++ AR F M R++V+WN+MI G HG
Sbjct: 359 LLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHG 418
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
G +ALE F M G PN TF+ VL AC+H G V +G YF+ + + ++++P ++HY
Sbjct: 419 LGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHY 478
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
CIV LL++AG+ K++E+ ++ ++ C + LG+ VA+ IE
Sbjct: 479 TCIVGLLSKAGMFKDAEDFMRTAPIE-WDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKY 537
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSV 412
P D G Y++LSN +A W+ V +VR ++ +G++KE S + + + + ++
Sbjct: 538 PNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQH 597
Query: 413 HRKRIMYSMLSELGAHIKLSPAG 435
++Y+ + E+ + IK P G
Sbjct: 598 PEITLIYAKVKEVMSKIK--PLG 618
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 117/250 (46%), Gaps = 5/250 (2%)
Query: 59 CMIAGYVAVGDLEAANELFERMPDR--DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV 116
C + Y+ +G+ A+ + R D N +I+ V+ A + F+ MP RNV
Sbjct: 41 CANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNV 100
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
VSW +M+ + + +E LK+F M SGE+ PNE V +C++ G++ G H
Sbjct: 101 VSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHG 160
Query: 177 -FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGE 235
F+K I + + +T L+ MY C A V D++P ++ ++S + GY G +
Sbjct: 161 CFLKYGLISHEFVRNT-LVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFK 219
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
+ L++ + + N+ T++ L ++ + M R + +VE G +
Sbjct: 220 EGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR-FGFNAEVEACGAL 278
Query: 296 VDLLARAGLV 305
+++ + G V
Sbjct: 279 INMYGKCGKV 288
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/462 (29%), Positives = 218/462 (47%), Gaps = 50/462 (10%)
Query: 12 RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRD-VWNWNCMIAGYVAVGDL 70
+L FDS D + ++ + K A+K+FDE+P RD WN ++ GY +
Sbjct: 188 KLGFDS----DCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 71 EAANELFERMPDR---------------------------------------DVVSWNCM 91
E A +F +M + D+V N +
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNAL 303
Query: 92 IDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPN 151
ID + + A F M R++ +WNS+L +H L +F+ M+ SG P+
Sbjct: 304 IDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSG-IRPD 362
Query: 152 EATLVSVLTACAHLGKLSVGMWVHSFIKS----NNIKVDVLLSTCLLTMYVKCGAMDLAR 207
TL +VL C L L G +H ++ N + + L+ MYVKCG + AR
Sbjct: 363 IVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDAR 422
Query: 208 DVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
VFD M V++ SWN MI GYG+ GE AL++F M + G KP++ TFV +L AC+H+G
Sbjct: 423 MVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSG 482
Query: 268 MVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXX 327
+ EG + M VYNI P +HY C++D+L RA ++ + EL +
Sbjct: 483 FLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPI-CDNPVVWRS 541
Query: 328 XXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGL 387
C H + +L + KRL ELEP G Y+++SN Y G++++V VR +R++ +
Sbjct: 542 ILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNV 601
Query: 388 QKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHI 429
+K S + L++ +F N + + ++ LS + +H+
Sbjct: 602 KKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHM 643
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 10/280 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MY+ G + A L+F S D+ YN++I G V NG A + + EM D +
Sbjct: 105 MYAKCGLMRRAVLVFGGS-ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYT 163
Query: 57 WNCMIAGYVA--VGDLEAANEL-FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
+ ++ G A + D++ + L F+ D D + ++ + +V A + F+ +P
Sbjct: 164 FPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPD 223
Query: 114 R-NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R + V WN+++ + + F + L +F +M E G V T+ SVL+A G + G
Sbjct: 224 RDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRH-TITSVLSAFTVSGDIDNGR 282
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H D+++S L+ MY K ++ A +F+ M R++ +WNS++ + G
Sbjct: 283 SIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCG 342
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ + L LF M G +P+ T VL C + +G
Sbjct: 343 DHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQG 382
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSF-IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV 209
N AT ++ L CA G +H F ++ + T L+ MY KCG M A V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 210 FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
F R+V +N++I G+ ++G+ A+E + EM G P+ TF +L
Sbjct: 119 FGGSE-RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG 170
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 212/412 (51%), Gaps = 16/412 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV------ 54
MYS GR+++A +F + L+S+N+MI G V G A F M ++
Sbjct: 151 MYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDE 210
Query: 55 WNWNCMIAGYVAVGDLEAANELFERM-------PDRDVVSWNCMIDGCVRVGNVPLALEF 107
+ ++ + G + A ++ + P ++ + ++D V+ G + A +
Sbjct: 211 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGS-LVDLYVKCGYLFSARKA 269
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F+++ + ++SW+S++ + + F E + +F + E + + A L S++ A
Sbjct: 270 FDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFA-LSSIIGVFADFAL 328
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L G + + ++ + ++ MY+KCG +D A F EM +++V+SW +I G
Sbjct: 329 LRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITG 388
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
YG HG G+K++ +F EM + +P++ ++ VLSAC+H+GM+ EG F + + I+P
Sbjct: 389 YGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKP 448
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
+VEHY C+VDLL RAG +K ++ LI + +K C H D ELG+ V K
Sbjct: 449 RVEHYACVVDLLGRAGRLKEAKHLIDTMPIK-PNVGIWQTLLSLCRVHGDIELGKEVGKI 507
Query: 348 LIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLE 399
L+ ++ + Y+M+SN Y G W++ R + KGL+KEA S V +E
Sbjct: 508 LLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIE 559
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 161/348 (46%), Gaps = 45/348 (12%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
L S L+L++ N +ID + K E A K+FD MP R+V +W+ +++G+V GDL+ +
Sbjct: 32 LLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGS 91
Query: 74 NELFERM------PDRDVVS---------------------------------WNCMIDG 94
LF M P+ S N ++D
Sbjct: 92 LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 151
Query: 95 CVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG-EAVPNEA 153
+ G + A + F R+ R+++SWN+M+A V A + L F M E+ + P+E
Sbjct: 152 YSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEF 211
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV--DVLLSTCLLTMYVKCGAMDLARDVFD 211
TL S+L AC+ G + G +H F+ + ++ L+ +YVKCG + AR FD
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 271
Query: 212 EMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
++ + ++SW+S+I+GY G +A+ LF +++ + + ++ ++ +
Sbjct: 272 QIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQ 331
Query: 272 GWWYFDLMRRV-YNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
G L ++ +E V +VD+ + GLV +E+ + +K
Sbjct: 332 GKQMQALAVKLPSGLETSV--LNSVVDMYLKCGLVDEAEKCFAEMQLK 377
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 149 VPNE-ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLAR 207
+PN+ LVS+L C G G VH ++ + ++++ S L+ MY KC +A
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 208 DVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
VFD MP RNVVSW++++ G+ L+G+ + +L LF EM ++G PN+ TF L AC
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 268 MVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYV 315
+ +G ++ E VE +VD+ ++ G + +E++ + +
Sbjct: 122 ALEKGLQIHGFCLKI-GFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 168
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/412 (32%), Positives = 211/412 (51%), Gaps = 26/412 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WN 56
MYS +G + D+ +F+S DLVS+N+++ G ++NG+ A +F M V +
Sbjct: 128 MYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFT 187
Query: 57 WNCMIAGYVAVGDLEAANELFERM--PDRD-VVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
+ ++ ++ L+ ++ + RD VV MI VG + A++ +N +
Sbjct: 188 LSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNV 247
Query: 114 R-NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+ V NS+++ +R +++ E + PN L S L C+ L +G
Sbjct: 248 HTDEVMLNSLISGCIRNRNYKEAFLLMSRQR------PNVRVLSSSLAGCSDNSDLWIGK 301
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H N D L L+ MY KCG + AR +F +P ++VVSW SMI Y ++G
Sbjct: 302 QIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNG 361
Query: 233 NGEKALELFLEM--EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
+G KALE+F EM E G PN TF+ V+SAC HAG+V EG F +M+ Y + P E
Sbjct: 362 DGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTE 421
Query: 291 HYGCIVDLLARAGLVKNSEELIKYVSV------KXXXXXXXXXXXXXCTTHMDSELGEIV 344
HY C +D+L++AG +EE+ + V + C+ +MD GE V
Sbjct: 422 HYVCFIDILSKAG---ETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYV 478
Query: 345 AKRLI-ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSV 395
A+RL+ E P + Y+++SN YAA G+WD VE +R ++ KGL K A S+
Sbjct: 479 ARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 102/197 (51%), Gaps = 3/197 (1%)
Query: 77 FERMPDRDVVSWNCMIDGCVRVGNVPL-ALEFFNRMPARNVVSWNSMLALHVRAKSFWEC 135
F R+ + V S N ++ CV + N A F+ +P R++ S NS L+ H+R+ + +
Sbjct: 10 FIRLGNVTVKSTNLVLR-CVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDT 68
Query: 136 LKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLT 195
L +F ++ + + + T VL AC+ L G VH+ + + + T L+
Sbjct: 69 LALFLQIHRASPDLSSH-TFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALID 127
Query: 196 MYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDAT 255
MY K G + + VF+ + +++VSWN+++ G+ +G G++AL +F M ++ + ++ T
Sbjct: 128 MYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFT 187
Query: 256 FVCVLSACTHAGMVMEG 272
V+ C ++ +G
Sbjct: 188 LSSVVKTCASLKILQQG 204
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 18/261 (6%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM----PVRDVWNWN-----CMIAGY 64
LFD DL S NS + H+++G LF ++ P + C + Y
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSY 99
Query: 65 VAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLA 124
G + + ++ + +S +ID + G++ ++ F + +++VSWN++L+
Sbjct: 100 PETGR-QVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLS 158
Query: 125 LHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIK 184
+R E L +F M + +E TL SV+ CA L L G VH+ +
Sbjct: 159 GFLRNGKGKEALGVFAAMYRERVEI-SEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRD 217
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKALELFLE 243
+ V+L T +++ Y G ++ A V++ + V + V NS+I G + N ++A FL
Sbjct: 218 L-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA---FLL 273
Query: 244 MEKKGPKPNDATFVCVLSACT 264
M ++ +PN L+ C+
Sbjct: 274 MSRQ--RPNVRVLSSSLAGCS 292
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 178/316 (56%), Gaps = 3/316 (0%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
G++ A F + R+++ WN+M++ +V+ E L ++ +M ++ VP++ T SV
Sbjct: 157 GDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQN-RIVPDQYTFASV 215
Query: 159 LTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
AC+ L +L G H+ + IK ++++ + L+ MY KC + VFD++ RNV
Sbjct: 216 FRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNV 275
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDL 278
++W S+I GYG HG + L+ F +M+++G +PN TF+ VL+AC H G+V +GW +F
Sbjct: 276 ITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYS 335
Query: 279 MRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDS 338
M+R Y IEP+ +HY +VD L RAG ++ + E + K C H +
Sbjct: 336 MKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCK-EHPPVWGSLLGACRIHGNV 394
Query: 339 ELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHL 398
+L E+ A + +EL+P + G Y++ +N YA+ G + +VR + G++K+ S + L
Sbjct: 395 KLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIEL 454
Query: 399 EDFESKYFVKNYSVHR 414
+ E F+K+ + HR
Sbjct: 455 QG-EVHRFMKDDTSHR 469
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 18/260 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWN 56
+Y++ G + A +LF S DL+ +N+MI G+V+ G ++ +M V D +
Sbjct: 152 LYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYT 211
Query: 57 WNCMIAGYVAVGDLEAANE----LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ + A+ LE + +R +++ + ++D + + F+++
Sbjct: 212 FASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLS 271
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
RNV++W S+++ + E LK F++M E G PN T + VLTAC H G + G
Sbjct: 272 TRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEG-CRPNPVTFLVVLTACNHGGLVDKG- 329
Query: 173 WVH--SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYG 229
W H S + I+ + ++ + G + A + + P + + W S++
Sbjct: 330 WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACR 389
Query: 230 LHGNGEKALEL----FLEME 245
+HGN K LEL FLE++
Sbjct: 390 IHGN-VKLLELAATKFLELD 408
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
SG V E T +L C + + G +H+ + ++ L LL +Y G +
Sbjct: 102 SGLQVEPE-TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQ 160
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
A +F + +R+++ WN+MI GY G ++ L ++ +M + P+ TF V AC+
Sbjct: 161 TAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACS 220
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 229/453 (50%), Gaps = 20/453 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWN 56
+Y+ G +SDA +F+ D+V ++ MI +NG A LF M V + +
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT 350
Query: 57 WNCMIAGYVAVGDLEAANELFERMP-----DRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
+ ++ G A+G E + D D+ N +ID + + A++ F +
Sbjct: 351 LSSILNG-CAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAEL 409
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
++N VSWN+++ + + MF E + + +V E T S L ACA L + +G
Sbjct: 410 SSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSV-TEVTFSSALGACASLASMDLG 468
Query: 172 MWVHSF-IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
+ VH IK+NN K V +S L+ MY KCG + A+ VF+EM +V SWN++I GY
Sbjct: 469 VQVHGLAIKTNNAK-KVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYST 527
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
HG G +AL + M+ + KPN TF+ VLS C++AG++ +G F+ M R + IEP +E
Sbjct: 528 HGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLE 587
Query: 291 HYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIE 350
HY C+V LL R+G + + +LI+ + + + + E A+ +++
Sbjct: 588 HYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQN-NEEFARRSAEEILK 646
Query: 351 LEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS-VVHLEDFESKYFVKN 409
+ P D Y+++SN YA +W +V +R ++E G++KE S + H D YF
Sbjct: 647 INPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVH--YFSVG 704
Query: 410 YSVHRK-RIMYSMLSELGAHIKLSPAGSIEKDN 441
S H +++ ML L ++K + AG + N
Sbjct: 705 LSDHPDMKLINGMLEWL--NMKATRAGYVPDRN 735
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 36/279 (12%)
Query: 21 LDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAAN------ 74
LDL + N +++ +VK G A LFDEMP R+ ++ + GY + +
Sbjct: 82 LDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREG 141
Query: 75 ------------ELFERMPDRDVVSW-----------------NCMIDGCVRVGNVPLAL 105
+LF + ++ W +I+ G+V A
Sbjct: 142 HELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSAR 201
Query: 106 EFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL 165
F + +++V W +++ +V F + LK+ M +G +PN T + L A L
Sbjct: 202 TVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG-FMPNNYTFDTALKASIGL 260
Query: 166 GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI 225
G VH I +D + LL +Y + G M A VF+EMP +VV W+ MI
Sbjct: 261 GAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMI 320
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
+ +G +A++LF+ M + PN+ T +L+ C
Sbjct: 321 ARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 6/207 (2%)
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM 143
D+ + N +++ V+ G AL F+ MP RN VS+ ++ + + + + ++ +
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTL----AQGYACQDPIGLYSRLH 138
Query: 144 ESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAM 203
G + N S L L K + W+HS I + + L+ Y CG++
Sbjct: 139 REGHEL-NPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSV 197
Query: 204 DLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
D AR VF+ + +++V W ++ Y +G E +L+L M G PN+ TF L A
Sbjct: 198 DSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKAS 257
Query: 264 THAGMV-MEGWWYFDLMRRVYNIEPKV 289
G + +++ Y ++P+V
Sbjct: 258 IGLGAFDFAKGVHGQILKTCYVLDPRV 284
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 172/304 (56%), Gaps = 4/304 (1%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
G V A + F MP RNVVSW +M++ + CLK++ +M +S + PN+ T ++
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKS-TSDPNDYTFTAL 227
Query: 159 LTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
L+AC G L G VH +K + +S L++MY KCG + A +FD+ ++V
Sbjct: 228 LSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDV 287
Query: 219 VSWNSMIMGYGLHGNGEKALELF-LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
VSWNSMI GY HG +A+ELF L M K G KP+ T++ VLS+C HAG+V EG +F+
Sbjct: 288 VSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFN 347
Query: 278 LMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMD 337
LM + ++P++ HY C+VDLL R GL++ + ELI+ + +K C H D
Sbjct: 348 LMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMK-PNSVIWGSLLFSCRVHGD 405
Query: 338 SELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVH 397
G A+ + LEP ++ L+N YA+ G W + VR ++++KGL+ S +
Sbjct: 406 VWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIE 465
Query: 398 LEDF 401
+ ++
Sbjct: 466 INNY 469
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 122/262 (46%), Gaps = 43/262 (16%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM----PD 82
+S++ + +GE A K+F+EMP R+V +W MI+G+ ++ +L+ +M D
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 83 RDVVSWNCMIDGCV-----------------------------------RVGNVPLALEF 107
+ ++ ++ C + G++ A
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F++ ++VVSWNSM+A + + + +++F+ MM P+ T + VL++C H G
Sbjct: 279 FDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGL 338
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIM 226
+ G + + + +K ++ +CL+ + + G + A ++ + MP++ N V W S++
Sbjct: 339 VKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLF 398
Query: 227 GYGLHGN---GEKALELFLEME 245
+HG+ G +A E L +E
Sbjct: 399 SCRVHGDVWTGIRAAEERLMLE 420
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%)
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
L S + +C G H DV L + L+ +Y G ++ A VF+EMP
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMP 182
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
RNVVSW +MI G+ + L+L+ +M K PND TF +LSACT +G + +G
Sbjct: 183 ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 216/435 (49%), Gaps = 13/435 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY G + A+ +FD V+ ++ G+ + G A KLF ++ V W+
Sbjct: 228 MYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGV-EWDSF 286
Query: 61 IAGYV--AVGDLEAANELFERMP--------DRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+ V A LE N L +++ + +V ++D ++ + A F
Sbjct: 287 VFSVVLKACASLEELN-LGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQE 345
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
+ N VSW+++++ + + F E +K F + ++ N T S+ AC+ L ++
Sbjct: 346 IREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNI 405
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G VH+ ++ + L+TMY KCG +D A +VF+ M ++V+W + I G+
Sbjct: 406 GGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAY 465
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
+GN +AL LF +M G KPN TF+ VL+AC+HAG+V +G D M R YN+ P ++
Sbjct: 466 YGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTID 525
Query: 291 HYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIE 350
HY C++D+ AR+GL+ + + +K + + C TH + ELGEI + L +
Sbjct: 526 HYDCMIDIYARSGLLDEALKFMKNMPFE-PDAMSWKCFLSGCWTHKNLELGEIAGEELRQ 584
Query: 351 LEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNY 410
L+P D Y++ N Y G+W++ + ++ E+ L+KE + S + + ++ V +
Sbjct: 585 LDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDK 644
Query: 411 SVHRKRIMYSMLSEL 425
+ + +Y L E
Sbjct: 645 HHPQTQEIYEKLKEF 659
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 103/214 (48%), Gaps = 5/214 (2%)
Query: 55 WNWNCMIAGYVAVGDLEAANELFERM----PDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+++ C+ + L L +RM + V+ NC++ ++ A + F+
Sbjct: 84 YSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDE 143
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
M N VS +M++ + + + +F M+ SG+ P+ + ++L + + L
Sbjct: 144 MSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS-SMYTTLLKSLVNPRALDF 202
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G +H+ + + + + T ++ MYVKCG + A+ VFD+M V+ V+ +++GY
Sbjct: 203 GRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQ 262
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
G AL+LF+++ +G + + F VL AC
Sbjct: 263 AGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 126/276 (45%), Gaps = 16/276 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------PVRDV 54
MY + DA LFD L+ VS +MI + + G A LF M P +
Sbjct: 127 MYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM 186
Query: 55 WNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGC----VRVGNVPLALEFFNR 110
+ ++ V L+ ++ + + S + G V+ G + A F++
Sbjct: 187 --YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS-VLTACAHLGKLS 169
M + V+ ++ + +A + LK+F +++ G V ++ + S VL ACA L +L+
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG--VEWDSFVFSVVLKACASLEELN 302
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
+G +H+ + ++ +V + T L+ Y+KC + + A F E+ N VSW+++I GY
Sbjct: 303 LGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYC 362
Query: 230 LHGNGEKALELFLEMEKKGPKP-NDATFVCVLSACT 264
E+A++ F + K N T+ + AC+
Sbjct: 363 QMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACS 398
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Query: 134 ECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCL 193
E + EM ++G +V + + + AC L LS G +H ++ VLL C+
Sbjct: 66 EAFEFLQEMDKAGVSV-SSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCV 124
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPND 253
L MY +C +++ A +FDEM N VS +MI Y G +KA+ LF M G KP
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 254 ATFVCVLSA 262
+ + +L +
Sbjct: 185 SMYTTLLKS 193
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 211/409 (51%), Gaps = 15/409 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+Y+ G++SD + ++V++NS+I + G A LF +M + D +
Sbjct: 348 LYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFT 407
Query: 57 WN-----CMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
C AG V +G + + + D V N +ID + G+V A FN++
Sbjct: 408 LASSISACENAGLVPLGKQIHGHVIRTDVSDEFV--QNSLIDMYSKSGSVDSASTVFNQI 465
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
R+VV+WNSML + + E + +FD M S + NE T ++V+ AC+ +G L G
Sbjct: 466 KHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM-NEVTFLAVIQACSSIGSLEKG 524
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
WVH + + +K D+ T L+ MY KCG ++ A VF M R++VSW+SMI YG+H
Sbjct: 525 KWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMH 583
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
G A+ F +M + G KPN+ F+ VLSAC H+G V EG +YF+LM+ + + P EH
Sbjct: 584 GRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEH 642
Query: 292 YGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL 351
+ C +DLL+R+G +K + IK + C H ++ + + L ++
Sbjct: 643 FACFIDLLSRSGDLKEAYRTIKEMPF-LADASVWGSLVNGCRIHQKMDIIKAIKNDLSDI 701
Query: 352 EPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
D G Y +LSN YA +G W++ R+R ++ L+K S + ++
Sbjct: 702 VTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQ 750
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 155/347 (44%), Gaps = 43/347 (12%)
Query: 11 ARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDL 70
A LL L D + +I+ + G ++R +F+ P D + + +I V L
Sbjct: 22 AHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLL 81
Query: 71 EAANELFERMP----------------------------------------DRDVVSWNC 90
+AA +L+ R+ D D V
Sbjct: 82 DAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETS 141
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
++ + GN+ A + F+ MP R++V+W+++++ + + L+MF M++ G P
Sbjct: 142 LLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDG-VEP 200
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
+ T++SV+ CA LG L + VH I +D L LLTMY KCG + + +F
Sbjct: 201 DAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIF 260
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVM 270
+++ +N VSW +MI Y EKAL F EM K G +PN T VLS+C G++
Sbjct: 261 EKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIR 320
Query: 271 EGWWYFDLMRRVYNIEPKVEHYG-CIVDLLARAGLVKNSEELIKYVS 316
EG R ++P E +V+L A G + + E +++ VS
Sbjct: 321 EGKSVHGFAVR-RELDPNYESLSLALVELYAECGKLSDCETVLRVVS 366
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 165/329 (50%), Gaps = 15/329 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLF----DEMPVRDVWN 56
MY G +SDA +FD DLV++++++ ++NGE A ++F D+ D
Sbjct: 145 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVT 204
Query: 57 WNCMIAGYVAVGDLEAA----NELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ G +G L A ++ +M D D N ++ + G++ + F ++
Sbjct: 205 MISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA 264
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+N VSW +M++ + R + + L+ F EM++SG PN TL SVL++C +G + G
Sbjct: 265 KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG-IEPNLVTLYSVLSSCGLIGLIREGK 323
Query: 173 WVHSFIKSNNIKVDV-LLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
VH F + + LS L+ +Y +CG + V + RN+V+WNS+I Y
Sbjct: 324 SVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHR 383
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
G +AL LF +M + KP+ T +SAC +AG+V G + R + V++
Sbjct: 384 GMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQN 443
Query: 292 YGCIVDLLARAGLVKNSEEL---IKYVSV 317
++D+ +++G V ++ + IK+ SV
Sbjct: 444 --SLIDMYSKSGSVDSASTVFNQIKHRSV 470
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 136/307 (44%), Gaps = 49/307 (15%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
LF S +L LVS H TG R+ D +PV +I Y +G +++
Sbjct: 7 LFRSCSSLRLVS-----QLHAHLLVTGRLRR--DPLPVTK------LIESYAFMGSPDSS 53
Query: 74 NELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFW 133
+FE P D + +I V + A++ ++R+ VS + ++ V
Sbjct: 54 RLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL-----VSETTQISKFV------ 102
Query: 134 ECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK-LSVGMWVHSFIKSNNIKVDVLLSTC 192
SVL ACA + LSVG VH I + D ++ T
Sbjct: 103 ---------------------FPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETS 141
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
LL MY + G + A VFD MPVR++V+W++++ +G KAL +F M G +P+
Sbjct: 142 LLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPD 201
Query: 253 DATFVCVLSACTHAG-MVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
T + V+ C G + + + + R++++++ + ++ + ++ G + +SE +
Sbjct: 202 AVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETL--CNSLLTMYSKCGDLLSSERI 259
Query: 312 IKYVSVK 318
+ ++ K
Sbjct: 260 FEKIAKK 266
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 138/483 (28%), Positives = 228/483 (47%), Gaps = 46/483 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MY F + AR LFD D VS+N++I+ + G A +LFD+M V
Sbjct: 188 MYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVIT 247
Query: 57 WNCMIAGYVAVGDLEAANELFERM--------PDRDVVSWN-CMIDGCVRVG-------- 99
WN + G + G+ A L RM P ++ C + G +R+G
Sbjct: 248 WNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAI 307
Query: 100 ----------------------NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLK 137
++ AL F + ++ +WNS+++ + + E
Sbjct: 308 HSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASH 367
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI-KSNNIKVDVLLSTCLLTM 196
+ EM+ +G PN TL S+L CA + L G H +I + K +L L+ +
Sbjct: 368 LLREMLVAGFQ-PNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDV 426
Query: 197 YVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATF 256
Y K G + A+ V D M R+ V++ S+I GYG G G AL LF EM + G KP+ T
Sbjct: 427 YAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTV 486
Query: 257 VCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVS 316
V VLSAC+H+ +V EG F M+ Y I P ++H+ C+VDL RAG + ++++I +
Sbjct: 487 VAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMP 546
Query: 317 VKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVE 376
K C H ++++G+ A++L+E++P + G Y++++N YAA G W +
Sbjct: 547 YK-PSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLA 605
Query: 377 RVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAGS 436
VR ++R+ G++K+ + + + S + V + S Y +L L +K + +
Sbjct: 606 EVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAGYA 665
Query: 437 IEK 439
I K
Sbjct: 666 INK 668
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 4/182 (2%)
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
WN ++A + + + F E + + M+ G P+ T SVL AC ++ G VH I
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKG-IRPDAFTYPSVLKACGETLDVAFGRVVHGSI 170
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
+ ++ K + + L++MY + M +AR +FD M R+ VSWN++I Y G +A
Sbjct: 171 EVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAF 230
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDL 298
ELF +M G + + T+ + C G + L+ R+ N ++ I+ L
Sbjct: 231 ELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGA---LGLISRMRNFPTSLDPVAMIIGL 287
Query: 299 LA 300
A
Sbjct: 288 KA 289
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 143 MESGEAVPNEATL---VSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVK 199
++S AV ++ L S+L+AC + G+ VH+ S+ ++ +L L+T Y
Sbjct: 31 LQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSA 90
Query: 200 CGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCV 259
+ A+ + + + + + WN +I Y + E+ + + M KG +P+ T+ V
Sbjct: 91 FNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSV 150
Query: 260 LSAC 263
L AC
Sbjct: 151 LKAC 154
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 194/399 (48%), Gaps = 45/399 (11%)
Query: 36 NGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM-------PD------ 82
N E AR++FDEMP DV W +++ + E A LF M PD
Sbjct: 211 NREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGT 270
Query: 83 ---------------------------RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARN 115
+VV + ++D + G+V A + FN M +N
Sbjct: 271 VLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKN 330
Query: 116 VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVH 175
VSW+++L + + + +++F EM E + +VL ACA L + +G +H
Sbjct: 331 SVSWSALLGGYCQNGEHEKAIEIFREMEE-----KDLYCFGTVLKACAGLAAVRLGKEIH 385
Query: 176 SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGE 235
+V++ + L+ +Y K G +D A V+ +M +RN+++WN+M+ +G GE
Sbjct: 386 GQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGE 445
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
+A+ F +M KKG KP+ +F+ +L+AC H GMV EG YF LM + Y I+P EHY C+
Sbjct: 446 EAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCM 505
Query: 296 VDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMD 355
+DLL RAGL + +E L++ + S + E +AKR++ELEP
Sbjct: 506 IDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKY 565
Query: 356 IGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
Y++LSN Y A GR D +R ++ +G+ K S
Sbjct: 566 HMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQS 604
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 25/323 (7%)
Query: 10 DARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGD 69
+ R +FD D +S+ SM+ G+V E A ++F EM ++ +
Sbjct: 115 ETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMV-----SFGLDANEFTLSSA 169
Query: 70 LEAANELFERMPDR---DVV-----SWNCMIDGCVR----VGNVPL-ALEFFNRMPARNV 116
++A +EL E R VV WN I + V P+ A F+ MP +V
Sbjct: 170 VKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDV 229
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
+ W ++L+ + + E L +F M VP+ +T +VLTAC +L +L G +H
Sbjct: 230 ICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHG 289
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
+ +N I +V++ + LL MY KCG++ AR VF+ M +N VSW++++ GY +G EK
Sbjct: 290 KLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEK 349
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGW-WYFDLMRRVYNIEPKVEHYGCI 295
A+E+F EME+K + F VL AC V G + +RR VE +
Sbjct: 350 AIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE--SAL 403
Query: 296 VDLLARAGLVKNSEELIKYVSVK 318
+DL ++G + ++ + +S++
Sbjct: 404 IDLYGKSGCIDSASRVYSKMSIR 426
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 101/189 (53%), Gaps = 16/189 (8%)
Query: 98 VGNVPLALEF------------FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMES 145
VGN L+L F F+ ++ +SW SM++ +V K + L++F EM+
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF 157
Query: 146 GEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMY-VKCGAMD 204
G NE TL S + AC+ LG++ +G H + ++ + + +S+ L +Y V +D
Sbjct: 158 G-LDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD 216
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEK-KGPKPNDATFVCVLSAC 263
AR VFDEMP +V+ W +++ + + E+AL LF M + KG P+ +TF VL+AC
Sbjct: 217 -ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC 275
Query: 264 THAGMVMEG 272
+ + +G
Sbjct: 276 GNLRRLKQG 284
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG-AM 203
S E S+L C + G+ H+ + + ++ D + LL++Y K G M
Sbjct: 54 SSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGM 113
Query: 204 DLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
R VFD V++ +SW SM+ GY KALE+F+EM G N+ T + AC
Sbjct: 114 RETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKAC 173
Query: 264 THAGMVMEG 272
+ G V G
Sbjct: 174 SELGEVRLG 182
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 174/298 (58%), Gaps = 13/298 (4%)
Query: 98 VGNVPLALEFFNRMPAR-NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLV 156
VG+V A + F+ P + N+V W +M++ + ++ E +++F M E + + +V
Sbjct: 113 VGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRM--EAEKIELDGVIV 170
Query: 157 SV-LTACAHLGKLSVG--MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM 213
+V L+ACA LG + +G ++ S + + +D+ L LL MYVK G + AR +FDE
Sbjct: 171 TVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDES 230
Query: 214 PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPK------PNDATFVCVLSACTHAG 267
++V ++ SMI GY L+G +++LELF +M+ PND TF+ VL AC+H+G
Sbjct: 231 MRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSG 290
Query: 268 MVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXX 327
+V EG +F M YN++P+ H+GC+VDL R+G +K++ E I + +K
Sbjct: 291 LVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIK-PNTVIWRT 349
Query: 328 XXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREK 385
C+ H + ELGE V +R+ EL+ +G Y+ LSN YA++G WD+ ++R +R++
Sbjct: 350 LLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKR 407
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 118/272 (43%), Gaps = 52/272 (19%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVR-DVWNWNCMIAGYVAVGDLEAANELFERMP---- 81
S++ + G+ AR++FDE P + ++ W MI+ Y + A ELF+RM
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR------NVVSWNSMLALHVRAKSFWEC 135
+ D V + C +G V + E ++R R ++ NS+L ++V++ +
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 136 LKMFDEMME---------------SGEA---------------------VPNEATLVSVL 159
K+FDE M +G+A PN+ T + VL
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 160 TACAHLGKLSVG-MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-N 217
AC+H G + G S I N+K C++ ++ + G + A + ++MP++ N
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 218 VVSWNSMIMGYGLHGN---GEKALELFLEMEK 246
V W +++ LHGN GE+ E+++
Sbjct: 344 TVIWRTLLGACSLHGNVELGEEVQRRIFELDR 375
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 47/153 (30%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFE 78
L +DL NS+++ +VK+GET ARKLFDE +DV + MI GY G + + ELF+
Sbjct: 200 LAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFK 259
Query: 79 RMPDRD-------------------------------------VVSWN---------CMI 92
+M D ++ +N CM+
Sbjct: 260 KMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMV 319
Query: 93 DGCVRVGNVPLALEFFNRMPAR-NVVSWNSMLA 124
D R G++ A EF N+MP + N V W ++L
Sbjct: 320 DLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLG 352
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 144 ESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAM 203
+S V + + L ++ + A G +H+ ++ + + T L+ Y G +
Sbjct: 57 QSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDV 116
Query: 204 DLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
D AR VFDE P + N+V W +MI Y + N +A+ELF ME + + + LSA
Sbjct: 117 DYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSA 176
Query: 263 CTHAGMVMEG 272
C G V G
Sbjct: 177 CADLGAVQMG 186
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 195/395 (49%), Gaps = 41/395 (10%)
Query: 40 GAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------PDR---------- 83
GAA K+F+ + +D+ WN MI+ Y ++A +++RM PD
Sbjct: 340 GAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATS 399
Query: 84 ---DVVSW-----------------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML 123
DV+ N +I + G + A F R +N++SWN+++
Sbjct: 400 LDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAII 459
Query: 124 ALHVRAKSFWECLKMFDEMMESG-EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
+ +E L+ F ++ES +P+ TL ++L+ C L +G H+++ +
Sbjct: 460 SGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHG 519
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
+ L+ L+ MY +CG + + +VF++M ++VVSWNS+I Y HG GE A+ +
Sbjct: 520 QFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYK 579
Query: 243 EMEKKGPK-PNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLAR 301
M+ +G P+ ATF VLSAC+HAG+V EG F+ M + + V+H+ C+VDLL R
Sbjct: 580 TMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGR 639
Query: 302 AGLVKNSEELIKYVSVKXXXXXXXX--XXXXXCTTHMDSELGEIVAKRLIELEPMDIGPY 359
AG + +E L+K +S K C H D +LG++VAK L+E E D Y
Sbjct: 640 AGHLDEAESLVK-ISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVY 698
Query: 360 IMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
+ LSN YA G W + E R I G K+ S
Sbjct: 699 VQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCS 733
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 37/245 (15%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
N+++ + + G + +K FDE+ DV++W +++ +GD+E A E+F++MP+RD V
Sbjct: 96 NTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDV 155
Query: 87 S-WNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMES 145
+ WN MI GC G ++E F M L VR F
Sbjct: 156 AIWNAMITGCKESGYHETSVELFREMH-----------KLGVRHDKF------------- 191
Query: 146 GEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDL 205
++L+ C + G L G VHS + + + L+TMY C +
Sbjct: 192 --------GFATILSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVD 242
Query: 206 ARDVFDE--MPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
A VF+E + VR+ V++N +I G E L +F +M + +P D TFV V+ +C
Sbjct: 243 ACLVFEETDVAVRDQVTFNVVIDGLAGFKRDESLL-VFRKMLEASLRPTDLTFVSVMGSC 301
Query: 264 THAGM 268
+ A M
Sbjct: 302 SCAAM 306
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 130/306 (42%), Gaps = 52/306 (16%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRD-VWNWNC 59
+Y G ++ + FD D+ S+ +++ K G+ A ++FD+MP RD V WN
Sbjct: 101 LYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNA 160
Query: 60 MIAGYVAVGDLEAANELFERMPD----RDVVSWNCMIDGC--------VRVGNVPLALEF 107
MI G G E + ELF M D + ++ C +V ++ + F
Sbjct: 161 MITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSLVIKAGF 220
Query: 108 F----------------------------NRMPARNVVSWNSM---LALHVRAKSFWECL 136
F + R+ V++N + LA R +S L
Sbjct: 221 FIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDES----L 276
Query: 137 KMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTM 196
+F +M+E+ P + T VSV+ +C+ ++G VH + L+S +TM
Sbjct: 277 LVFRKMLEA-SLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGYEKYTLVSNATMTM 332
Query: 197 YVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATF 256
Y A VF+ + +++V+WN+MI Y G+ A+ ++ M G KP++ TF
Sbjct: 333 YSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTF 392
Query: 257 VCVLSA 262
+L+
Sbjct: 393 GSLLAT 398
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 215/441 (48%), Gaps = 42/441 (9%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
G+V A LF D ++NSM+ G+++ G+ A KLF +MP ++V +W MI G
Sbjct: 142 GKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLD 201
Query: 66 AVGDLEAANELFERMPDRDVVS----WNCMIDGC---------VRVGNVPLALEF----- 107
A +LF+ M + S + C+I C ++V + + L F
Sbjct: 202 QNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEY 261
Query: 108 ---------------------FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
F+ V W ++L+ + K + L +F M+ +
Sbjct: 262 VSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRN- 320
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
+PN++T S L +C+ LG L G +H ++ D + L+ MY G ++ A
Sbjct: 321 SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDA 380
Query: 207 RDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHA 266
VF ++ +++VSWNS+I+G HG G+ A +F +M + +P++ TF +LSAC+H
Sbjct: 381 VSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHC 440
Query: 267 GMVMEGWWYFDLMRRVYN-IEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXX 325
G + +G F M N I+ K++HY C+VD+L R G +K +EELI+ + VK
Sbjct: 441 GFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVK-PNEMVW 499
Query: 326 XXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREK 385
C H D + GE A + L+ Y++LSN YA+ GRW +V ++RV +++
Sbjct: 500 LALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKN 559
Query: 386 GLQKEAASSVVHLEDFESKYF 406
G+ K+ SS V + + ++F
Sbjct: 560 GIMKKPGSSWVVIRGKKHEFF 580
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 140/268 (52%), Gaps = 1/268 (0%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ R+ DA LFD D+VS+NSMI G V+ G+ A KLFDEMP R V +W M+
Sbjct: 76 YTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMV 135
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
G G ++ A LF +MP +D +WN M+ G ++ G V AL+ F +MP +NV+SW +
Sbjct: 136 NGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTT 195
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
M+ + + E L +F M+ + V+TACA+ +G+ VH I
Sbjct: 196 MICGLDQNERSGEALDLFKNMLRCCIKSTSRP-FTCVITACANAPAFHMGIQVHGLIIKL 254
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
+ +S L+T Y C + +R VFDE V W +++ GY L+ E AL +F
Sbjct: 255 GFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIF 314
Query: 242 LEMEKKGPKPNDATFVCVLSACTHAGMV 269
M + PN +TF L++C+ G +
Sbjct: 315 SGMLRNSILPNQSTFASGLNSCSALGTL 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 187 VLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEK 246
V L T ++T Y + + A ++FDEMPVR+VVSWNSMI G G+ A++LF EM
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM-- 123
Query: 247 KGPKPNDATFVCVLSACTHAGMV 269
P+ + ++ +++ C +G V
Sbjct: 124 --PERSVVSWTAMVNGCFRSGKV 144
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 220/447 (49%), Gaps = 45/447 (10%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMP-VRDVWNWNCMIAGYVAVGDLEAANELFERMP---- 81
N+MI + G A+++FD + +D+ +WN MIAG+ E+A ELF +M
Sbjct: 242 NAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV 301
Query: 82 DRDVVSWNCMIDGC-------------------------------------VRVGNVPLA 104
+ D+ ++ ++ C G + A
Sbjct: 302 ETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDA 361
Query: 105 LEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
L F + +++++SWNS++ + + +K F + S E ++ ++L +C+
Sbjct: 362 LSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFF-SYLRSSEIKVDDYAFSALLRSCSD 420
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN-VVSWNS 223
L L +G +H+ + + + + L+ MY KCG ++ AR F ++ ++ V+WN+
Sbjct: 421 LATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNA 480
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVY 283
MI+GY HG G+ +L+LF +M + K + TF +L+AC+H G++ EG +LM VY
Sbjct: 481 MILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVY 540
Query: 284 NIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEI 343
I+P++EHY VDLL RAGLV ++ELI+ + + C + E+
Sbjct: 541 KIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLN-PDPMVLKTFLGVCRACGEIEMATQ 599
Query: 344 VAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFES 403
VA L+E+EP D Y+ LS+ Y+ +W++ V+ M++E+G++K S + + +
Sbjct: 600 VANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVK 659
Query: 404 KYFVKNYSVHRKRIMYSMLSELGAHIK 430
+ ++ S + +Y M+ +L ++
Sbjct: 660 AFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 134/288 (46%), Gaps = 50/288 (17%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM- 80
D+ N ++D ++K G G A LFDEMP RD +WN MI+GY + G LE A LF M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 81 ---PDRDVVSWNCMIDGCVRVGNVPL---------------------------------- 103
D D S++ ++ G V L
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 104 -ALEFFNRMPARNVVSWNSMLALHVRAK----SFWECLKMFDEMMESGEAVPNEA-TLVS 157
A E F + N VSWN+++A V+ + +FW +ME AV +A T
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFW-----LLGLMEMKAAVTMDAGTFAP 208
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM-PVR 216
+LT ++ VH+ + ++ ++ + +++ Y CG++ A+ VFD + +
Sbjct: 209 LLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSK 268
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
+++SWNSMI G+ H E A ELF++M++ + + T+ +LSAC+
Sbjct: 269 DLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 16/146 (10%)
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
IK +I D+ +S +L Y+K G + A +FDEMP R+ VSWN+MI GY G E A
Sbjct: 27 IKCGSIS-DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDA 85
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGC--- 294
LF M++ G + +F +L FDL +V+ + K Y C
Sbjct: 86 WCLFTCMKRSGSDVDGYSFSRLLKGIASVKR-------FDLGEQVHGLVIK-GGYECNVY 137
Query: 295 ----IVDLLARAGLVKNSEELIKYVS 316
+VD+ A+ V+++ E K +S
Sbjct: 138 VGSSLVDMYAKCERVEDAFEAFKEIS 163
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/450 (29%), Positives = 222/450 (49%), Gaps = 54/450 (12%)
Query: 3 SVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIA 62
S R+ A +L D + ++ +++D ++K + AA +FD+M V++ +W MI+
Sbjct: 165 SKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMIS 224
Query: 63 GYVAVGDLEAANELFERM------PDRDVVSWNCMIDGCV-------------------- 96
G VA + E +LF M P+R V+ ++ CV
Sbjct: 225 GCVANQNYEMGVDLFRAMQRENLRPNR--VTLLSVLPACVELNYGSSLVKEIHGFSFRHG 282
Query: 97 ----------------RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
R GNV L+ F R+VV W+SM++ + E + + +
Sbjct: 283 CHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLN 342
Query: 141 EMMESG-EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVK 199
+M + G EA N TL+++++AC + LS VHS I +LL L+ MY K
Sbjct: 343 QMRKEGIEA--NSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAK 400
Query: 200 CGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCV 259
CG++ AR+VF E+ +++VSW+SMI YGLHG+G +ALE+F M K G + +D F+ +
Sbjct: 401 CGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAI 460
Query: 260 LSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKX 319
LSAC HAG+V E F + Y++ +EHY C ++LL R G + ++ E+ + +K
Sbjct: 461 LSACNHAGLVEEAQTIFTQAGK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMK- 518
Query: 320 XXXXXXXXXXXXCTTHMDSEL-GEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERV 378
C TH ++ G+I+A L++ EP + Y++LS + G + E V
Sbjct: 519 PSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEV 578
Query: 379 RVMIREKGLQKEAASSVV----HLEDFESK 404
R +++ + L K S + +ED++ K
Sbjct: 579 RRVMQRRKLNKCYGFSKIEPELQIEDYQGK 608
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 142/281 (50%), Gaps = 14/281 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ F R R +FD L D VSY S+I+ ++G A KL EM + +
Sbjct: 91 MYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSEL 150
Query: 61 IAGYVAV----GDLEAANELF-------ERMPDRDVVSWNCMIDGCVRVGNVPLALEFFN 109
+A +A+ G +F ERM + ++S ++D ++ + A F+
Sbjct: 151 VASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLS-TALVDMYLKFDDHAAAFHVFD 209
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG-KL 168
+M +N VSW +M++ V +++ + +F M+ PN TL+SVL AC L
Sbjct: 210 QMEVKNEVSWTAMISGCVANQNYEMGVDLF-RAMQRENLRPNRVTLLSVLPACVELNYGS 268
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
S+ +H F + D L+ +TMY +CG + L+R +F+ VR+VV W+SMI GY
Sbjct: 269 SLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGY 328
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
G+ + + L +M K+G + N T + ++SACT++ ++
Sbjct: 329 AETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLL 369
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Query: 134 ECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK-LSVGMWVHSFIKSNNIKVDVLLSTC 192
E L+++ + S A L SV+ ACA + +G +H D ++S
Sbjct: 28 EALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNS 87
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
L++MY K R VFDEM R+ VS+ S+I G +A++L EM G P
Sbjct: 88 LISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPK 147
Query: 253 DATFVCVLSACTHAG 267
+L+ CT G
Sbjct: 148 SELVASLLALCTRMG 162
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 202/418 (48%), Gaps = 41/418 (9%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDV- 85
NS+ + + GE LF+ M RDV +W +I Y +G A E F +M + V
Sbjct: 248 NSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVP 307
Query: 86 ---VSWNCMIDGCVRV-----------------------------------GNVPLALEF 107
++ M C + GN+ A
Sbjct: 308 PNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVL 367
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F M R+++SW++++ + +A E K F M +SG P + L S+L+ ++
Sbjct: 368 FQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTK-PTDFALASLLSVSGNMAV 426
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
+ G VH+ ++ + + + L+ MY KCG++ A +F E ++VS +MI G
Sbjct: 427 IEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMING 486
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
Y HG ++A++LF + K G +P+ TF+ VL+ACTH+G + G+ YF++M+ YN+ P
Sbjct: 487 YAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRP 546
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
EHYGC+VDLL RAG + ++E++I +S K C D E G A+R
Sbjct: 547 AKEHYGCMVDLLCRAGRLSDAEKMINEMSWK-KDDVVWTTLLIACKAKGDIERGRRAAER 605
Query: 348 LIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKY 405
++EL+P + L+N Y++ G ++ VR ++ KG+ KE S + ++D S +
Sbjct: 606 ILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAF 663
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 124/278 (44%), Gaps = 42/278 (15%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------ 80
NS + + G AAR++FD+MP D+ +W +I YV + + A LF M
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 81 --PDRDVVS---------------------------------WNCMIDGCVRVGNVPLAL 105
PD V+S + ++D RVG + +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 106 EFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL 165
F+ MP RN V+W +++ V A + E L F EM S E + + T L ACA L
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRS-EELSDTYTFAIALKACAGL 222
Query: 166 GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI 225
++ G +H+ + + ++ L TMY +CG M +F+ M R+VVSW S+I
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
+ Y G KA+E F++M PN+ TF + SAC
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSAC 320
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 140/316 (44%), Gaps = 10/316 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWN 56
MY G++ + +F + V++ ++I G V G F EM + D +
Sbjct: 152 MYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYT 211
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGC----VRVGNVPLALEFFNRMP 112
+ + + ++ + + R V+ C+ + G + L F M
Sbjct: 212 FAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS 271
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R+VVSW S++ + R + ++ F +M S + PNE T S+ +ACA L +L G
Sbjct: 272 ERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNS-QVPPNEQTFASMFSACASLSRLVWGE 330
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H + S + + +S ++ MY CG + A +F M R+++SW+++I GY G
Sbjct: 331 QLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAG 390
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
GE+ + F M + G KP D +LS + V+EG + + +E
Sbjct: 391 FGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMA-VIEGGRQVHALALCFGLEQNSTVR 449
Query: 293 GCIVDLLARAGLVKNS 308
++++ ++ G +K +
Sbjct: 450 SSLINMYSKCGSIKEA 465
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 1/185 (0%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
N + + GN+ A + F++MP ++VSW S++ +V A + E L +F M A
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 149 V-PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLAR 207
V P+ + L VL AC ++ G +H++ ++ V + + LL MY + G +D +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 208 DVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
VF EMP RN V+W ++I G G ++ L F EM + + TF L AC
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 268 MVMEG 272
V G
Sbjct: 224 QVKYG 228
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 218/446 (48%), Gaps = 45/446 (10%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELF----ERMPD 82
N ++ HVK G AR+LFDE+P R+++++ +I+G+V G+ A ELF E + D
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 83 RDVVSWNCM-----------------------------------IDGCVRVGNVPLALEF 107
+ ++ M ID + G++ A
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F MP + V+WN+++A + E L + +M +SG ++ ++ TL ++ L K
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSI-DQFTLSIMIRISTKLAK 340
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L + H+ + N + +++ +T L+ Y K G +D AR VFD++P +N++SWN+++ G
Sbjct: 341 LELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGG 400
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
Y HG G A++LF +M PN TF+ VLSAC ++G+ +GW F M V+ I+P
Sbjct: 401 YANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKP 460
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
+ HY C+++LL R GL+ + I+ +K C + ELG +VA++
Sbjct: 461 RAMHYACMIELLGRDGLLDEAIAFIRRAPLK-TTVNMWAALLNACRMQENLELGRVVAEK 519
Query: 348 LIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED----FES 403
L + P +G Y+++ N Y + G+ + V + KGL A + V + D F S
Sbjct: 520 LYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLS 579
Query: 404 KYFVKNYSVHRKRIMYSMLSELGAHI 429
+Y+ KR +Y + EL I
Sbjct: 580 GDRFDSYNETVKRQIYQKVDELMEEI 605
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 123/290 (42%), Gaps = 46/290 (15%)
Query: 61 IAGYVAVGDLEAANELFERMPDR-----DVVSWNCMIDGCVRVGNVPLALEFFNRM---- 111
I V A ELFE + R V +++ +++ C+R+ ++ + M
Sbjct: 94 IEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNG 153
Query: 112 --PARNVVSWNSMLALHVRAKSFWECLKMFDEMME----------SG--------EAVP- 150
P + ++ N +L +HV+ + ++FDE+ E SG EA
Sbjct: 154 FEPEQYMM--NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFEL 211
Query: 151 -----------NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVK 199
T +L A A LG + VG +H + + +S L+ MY K
Sbjct: 212 FKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSK 271
Query: 200 CGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCV 259
CG ++ AR F+ MP + V+WN++I GY LHG E+AL L +M G + T +
Sbjct: 272 CGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIM 331
Query: 260 LSACTH-AGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNS 308
+ T A + + + L+R + E ++ +VD ++ G V +
Sbjct: 332 IRISTKLAKLELTKQAHASLIRNGF--ESEIVANTALVDFYSKWGRVDTA 379
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%)
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+++ V+ S + V F E ++F+ + +T +++ AC L +
Sbjct: 84 SKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVK 143
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
V+ F+ SN + + + +L M+VKCG + AR +FDE+P RN+ S+ S+I G+ G
Sbjct: 144 RVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFG 203
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
N +A ELF M ++ TF +L A G + G
Sbjct: 204 NYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVG 243
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 221/455 (48%), Gaps = 46/455 (10%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L S L + ++ S+ D + + G +AR++FD++ D +WN +IAG G +
Sbjct: 295 LCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADE 354
Query: 73 ANELFERM------PD------------------------RDVVSWNCMIDGCVRVGNVP 102
A +F +M PD ++ W + D + V N
Sbjct: 355 AVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLAD--LTVCNSL 412
Query: 103 LALEFF------------NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
L + F + + VSWN++L ++ + E L++F M+ S E P
Sbjct: 413 LTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVS-ECEP 471
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
+ T+ ++L C + L +G VH + + + + L+ MY KCG++ AR +F
Sbjct: 472 DHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIF 531
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVM 270
D M R+VVSW+++I+GY G GE+AL LF EM+ G +PN TFV VL+AC+H G+V
Sbjct: 532 DSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVE 591
Query: 271 EGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXX 330
EG + M+ + I P EH C+VDLLARAG + +E I + ++
Sbjct: 592 EGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLE-PDVVVWKTLLS 650
Query: 331 XCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKE 390
C T + L + A+ +++++P + +++L + +A+ G W++ +R +++ ++K
Sbjct: 651 ACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKI 710
Query: 391 AASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
S + +ED +F ++ + +Y++L +
Sbjct: 711 PGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 135/280 (48%), Gaps = 8/280 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWN 56
MY G + DAR +FD +LVSY S+I G+ +NG+ A +L+ +M V D +
Sbjct: 111 MYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFA 170
Query: 57 WNCMIAGYVAVGDLEAANELFERM----PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ +I + D+ +L ++ +++ N +I VR + A F +P
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
++++SW+S++A + +E L EM+ G PNE S L AC+ L + G
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGS 290
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H + + + + L MY +CG ++ AR VFD++ + SWN +I G +G
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNG 350
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
++A+ +F +M G P+ + +L A T + +G
Sbjct: 351 YADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQG 390
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%)
Query: 128 RAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDV 187
++ + E L+ FD ++ T +S++ AC+ L+ G +H I ++N K D
Sbjct: 43 KSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDT 102
Query: 188 LLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK 247
+L+ +L+MY KCG++ AR+VFD MP RN+VS+ S+I GY +G G +A+ L+L+M ++
Sbjct: 103 ILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQE 162
Query: 248 GPKPNDATFVCVLSACTHAGMVMEG 272
P+ F ++ AC + V G
Sbjct: 163 DLVPDQFAFGSIIKACASSSDVGLG 187
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 114/250 (45%), Gaps = 29/250 (11%)
Query: 16 DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANE 75
+SS + L +Y S+I + RK+ D + N NC
Sbjct: 60 NSSFKIRLRTYISLICACSSSRSLAQGRKIHDH-----ILNSNC---------------- 98
Query: 76 LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWEC 135
D + N ++ + G++ A E F+ MP RN+VS+ S++ + + E
Sbjct: 99 ------KYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEA 152
Query: 136 LKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLT 195
++++ +M++ + VP++ S++ ACA + +G +H+ + ++ L+
Sbjct: 153 IRLYLKMLQE-DLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIA 211
Query: 196 MYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP-KPNDA 254
MYV+ M A VF +P+++++SW+S+I G+ G +AL EM G PN+
Sbjct: 212 MYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEY 271
Query: 255 TFVCVLSACT 264
F L AC+
Sbjct: 272 IFGSSLKACS 281
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 48/285 (16%)
Query: 23 LVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVG-DLEAANELFERM- 80
L++ N++I +V+ + A ++F +P++D+ +W+ +IAG+ +G + EA + L E +
Sbjct: 203 LIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLS 262
Query: 81 -----------------------PD----------RDVVSWNCMIDGC------VRVGNV 101
PD + ++ N I GC R G +
Sbjct: 263 FGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGN-AIAGCSLCDMYARCGFL 321
Query: 102 PLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
A F+++ + SWN ++A E + +F +M SG +P+ +L S+L A
Sbjct: 322 NSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG-FIPDAISLRSLLCA 380
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN---V 218
LS GM +HS+I D+ + LLTMY C + ++F++ RN
Sbjct: 381 QTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDF--RNNADS 438
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
VSWN+++ H + L LF M +P+ T +L C
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 191 bits (485), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 213/460 (46%), Gaps = 42/460 (9%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L+ S L + + N+++ + K GE +R++ +MP RDV WN +I GY D +
Sbjct: 370 LVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDK 429
Query: 73 ANELFERMPDRDVVS----------------------------------------WNCMI 92
A F+ M V S N +I
Sbjct: 430 ALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLI 489
Query: 93 DGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNE 152
+ G++ + + FN + RN+++WN+MLA + E LK+ +M G ++ ++
Sbjct: 490 TMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSL-DQ 548
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
+ L+A A L L G +H + D + MY KCG + +
Sbjct: 549 FSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP 608
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
R++ SWN +I G HG E+ F EM + G KP TFV +L+AC+H G+V +G
Sbjct: 609 SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKG 668
Query: 273 WWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXC 332
Y+D++ R + +EP +EH C++DLL R+G + +E I + +K C
Sbjct: 669 LAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMK-PNDLVWRSLLASC 727
Query: 333 TTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAA 392
H + + G A+ L +LEP D Y++ SN +A GRW+DVE VR + K ++K+ A
Sbjct: 728 KIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQA 787
Query: 393 SSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLS 432
S V L+D S + + + + + +Y+ L ++ IK S
Sbjct: 788 CSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKES 827
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 125/294 (42%), Gaps = 40/294 (13%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
S L L NS+I G A +FD+M RD +WN + A Y G +E + +
Sbjct: 172 SGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRI 231
Query: 77 F---ERMPDR----------------DVVSWNCMIDGCV--------------------R 97
F R D D W I G V
Sbjct: 232 FSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAG 291
Query: 98 VGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
G A F +MP ++++SWNS++A V + L + M+ SG++V N T S
Sbjct: 292 AGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV-NYVTFTS 350
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
L AC G +H + + + + ++ L++MY K G M +R V +MP R+
Sbjct: 351 ALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRD 410
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
VV+WN++I GY + +KAL F M +G N T V VLSAC G ++E
Sbjct: 411 VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 464
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL-S 169
MP RN VSWN+M++ VR + E ++ F +M + G P+ + S++TAC G +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLG-IKPSSFVIASLVTACGRSGSMFR 59
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
G+ VH F+ + + DV +ST +L +Y G + +R VF+EMP RNVVSW S+++GY
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
G E+ ++++ M +G N+ + V+S+C
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 153
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 110/266 (41%), Gaps = 40/266 (15%)
Query: 37 GETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPD-------------- 82
G +RK+F+EMP R+V +W ++ GY G+ E ++++ M
Sbjct: 91 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 150
Query: 83 ------------RDVVSW-------------NCMIDGCVRVGNVPLALEFFNRMPARNVV 117
R ++ N +I +GNV A F++M R+ +
Sbjct: 151 SSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 210
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
SWNS+ A + + E ++F M + V N T+ ++L+ H+ G +H
Sbjct: 211 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV-NSTTVSTLLSVLGHVDHQKWGRGIHGL 269
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
+ V + LL MY G A VF +MP ++++SWNS++ + G A
Sbjct: 270 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA 329
Query: 238 LELFLEMEKKGPKPNDATFVCVLSAC 263
L L M G N TF L+AC
Sbjct: 330 LGLLCSMISSGKSVNYVTFTSALAAC 355
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 43/258 (16%)
Query: 49 MPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWN----CMIDGCVRVGN---- 100
MPVR+ +WN M++G V VG E F +M D + + ++ C R G+
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 101 --------------------------------VPLALEFFNRMPARNVVSWNSMLALHVR 128
V + + F MP RNVVSW S++ +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 129 AKSFWECLKMFDEMMESGEAVP-NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDV 187
E + ++ M GE V NE ++ V+++C L S+G + + + ++ +
Sbjct: 121 KGEPEEVIDIYKGM--RGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 178
Query: 188 LLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK 247
+ L++M G +D A +FD+M R+ +SWNS+ Y +G+ E++ +F M +
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238
Query: 248 GPKPNDATFVCVLSACTH 265
+ N T +LS H
Sbjct: 239 HDEVNSTTVSTLLSVLGH 256
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 191 bits (485), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 213/460 (46%), Gaps = 42/460 (9%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L+ S L + + N+++ + K GE +R++ +MP RDV WN +I GY D +
Sbjct: 387 LVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDK 446
Query: 73 ANELFERMPDRDVVS----------------------------------------WNCMI 92
A F+ M V S N +I
Sbjct: 447 ALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLI 506
Query: 93 DGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNE 152
+ G++ + + FN + RN+++WN+MLA + E LK+ +M G ++ ++
Sbjct: 507 TMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSL-DQ 565
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
+ L+A A L L G +H + D + MY KCG + +
Sbjct: 566 FSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP 625
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
R++ SWN +I G HG E+ F EM + G KP TFV +L+AC+H G+V +G
Sbjct: 626 SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKG 685
Query: 273 WWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXC 332
Y+D++ R + +EP +EH C++DLL R+G + +E I + +K C
Sbjct: 686 LAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMK-PNDLVWRSLLASC 744
Query: 333 TTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAA 392
H + + G A+ L +LEP D Y++ SN +A GRW+DVE VR + K ++K+ A
Sbjct: 745 KIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQA 804
Query: 393 SSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLS 432
S V L+D S + + + + + +Y+ L ++ IK S
Sbjct: 805 CSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKES 844
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 97/169 (57%), Gaps = 2/169 (1%)
Query: 96 VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATL 155
+ G V A F+ MP RN VSWN+M++ VR + E ++ F +M + G P+ +
Sbjct: 3 TKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLG-IKPSSFVI 61
Query: 156 VSVLTACAHLGKL-SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
S++TAC G + G+ VH F+ + + DV +ST +L +Y G + +R VF+EMP
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
RNVVSW S+++GY G E+ ++++ M +G N+ + V+S+C
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 170
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 125/294 (42%), Gaps = 40/294 (13%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
S L L NS+I G A +FD+M RD +WN + A Y G +E + +
Sbjct: 189 SGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRI 248
Query: 77 F---ERMPDR----------------DVVSWNCMIDGCV--------------------R 97
F R D D W I G V
Sbjct: 249 FSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAG 308
Query: 98 VGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
G A F +MP ++++SWNS++A V + L + M+ SG++V N T S
Sbjct: 309 AGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV-NYVTFTS 367
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
L AC G +H + + + + ++ L++MY K G M +R V +MP R+
Sbjct: 368 ALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRD 427
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
VV+WN++I GY + +KAL F M +G N T V VLSAC G ++E
Sbjct: 428 VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 481
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 43/274 (15%)
Query: 33 HVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWN--- 89
+ K G AR LFD MPVR+ +WN M++G V VG E F +M D + +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 90 -CMIDGCVRVGN------------------------------------VPLALEFFNRMP 112
++ C R G+ V + + F MP
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP-NEATLVSVLTACAHLGKLSVG 171
RNVVSW S++ + E + ++ M GE V NE ++ V+++C L S+G
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGM--RGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
+ + + ++ + + L++M G +D A +FD+M R+ +SWNS+ Y +
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTH 265
G+ E++ +F M + + N T +LS H
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 273
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 110/266 (41%), Gaps = 40/266 (15%)
Query: 37 GETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPD-------------- 82
G +RK+F+EMP R+V +W ++ GY G+ E ++++ M
Sbjct: 108 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 167
Query: 83 ------------RDVVSW-------------NCMIDGCVRVGNVPLALEFFNRMPARNVV 117
R ++ N +I +GNV A F++M R+ +
Sbjct: 168 SSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 227
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
SWNS+ A + + E ++F M + V N T+ ++L+ H+ G +H
Sbjct: 228 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV-NSTTVSTLLSVLGHVDHQKWGRGIHGL 286
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
+ V + LL MY G A VF +MP ++++SWNS++ + G A
Sbjct: 287 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA 346
Query: 238 LELFLEMEKKGPKPNDATFVCVLSAC 263
L L M G N TF L+AC
Sbjct: 347 LGLLCSMISSGKSVNYVTFTSALAAC 372
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 196 MYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDAT 255
MY K G + AR +FD MPVRN VSWN+M+ G G + +E F +M G KP+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 256 FVCVLSACTHAG-MVMEG 272
+++AC +G M EG
Sbjct: 61 IASLVTACGRSGSMFREG 78
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 188/373 (50%), Gaps = 33/373 (8%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D+V ++++D + K G A KLF E+ D N MI Y + G ++ A +FER+
Sbjct: 352 DIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIE 411
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
++ ++SWN M +G + G LE+F++M ++ +
Sbjct: 412 NKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPT----------------------- 448
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
+E +L SV++ACA + L +G V + + D ++S+ L+ +Y KCG
Sbjct: 449 ---------DEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCG 499
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
++ R VFD M + V WNSMI GY +G G +A++LF +M G +P TF+ VL+
Sbjct: 500 FVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLT 559
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXX 321
AC + G+V EG F+ M+ + P EH+ C+VDLLARAG V+ + L++ +
Sbjct: 560 ACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFD-VD 618
Query: 322 XXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVM 381
C + +G+ A+++IELEP + Y+ LS +A G W+ VR +
Sbjct: 619 GSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKL 678
Query: 382 IREKGLQKEAASS 394
+RE + K SS
Sbjct: 679 MRENNVTKNPGSS 691
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 149/297 (50%), Gaps = 36/297 (12%)
Query: 7 RVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVA 66
R ++ LL L+ ++ N ++ + ++G+ G AR LFDEMP R+ ++WN MI GY+
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMN 105
Query: 67 VGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALH 126
G+ + F+ MP+RD SWN ++ G + G + +A FN MP ++VV+ NS+L +
Sbjct: 106 SGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGY 165
Query: 127 VRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVD 186
+ E L++F E+ S +A+ TL +VL ACA L L G +H+ I ++ D
Sbjct: 166 ILNGYAEEALRLFKELNFSADAI----TLTTVLKACAELEALKCGKQIHAQILIGGVECD 221
Query: 187 VLLSTCLLTMYVKCGAMDLA-------------------------------RDVFDEMPV 215
+++ L+ +Y KCG + +A R +FD
Sbjct: 222 SKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSN 281
Query: 216 RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
R V+ WNSMI GY + +AL LF EM + + + T V++AC G + G
Sbjct: 282 RCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETG 337
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 157/374 (41%), Gaps = 70/374 (18%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM--------------PV 51
G +S AR LF++ D+V+ NS++ G++ NG A +LF E+
Sbjct: 138 GELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKAC 197
Query: 52 RDVWNWNC--------MIAG--------------YVAVGDLEAANELFERMPDRDVVSWN 89
++ C +I G Y GDL A+ + E++ + D S +
Sbjct: 198 AELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLS 257
Query: 90 CMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV 149
+I G G V + F+R R V+ WNSM++ ++ E L +F+EM E
Sbjct: 258 ALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM--RNETR 315
Query: 150 PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA------- 202
+ TL +V+ AC LG L G +H + D+++++ LL MY KCG+
Sbjct: 316 EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 203 ------------------------MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
+D A+ VF+ + ++++SWNSM G+ +G + L
Sbjct: 376 FSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETL 435
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDL 298
E F +M K ++ + V+SAC + G F + ++ ++DL
Sbjct: 436 EYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVF-ARATIVGLDSDQVVSSSLIDL 494
Query: 299 LARAGLVKNSEELI 312
+ G V++ +
Sbjct: 495 YCKCGFVEHGRRVF 508
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 45/289 (15%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MYS G +A LF + D + NSMI + G A+++F+ + + + +WN M
Sbjct: 362 MYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSM 421
Query: 61 IAGY-----------------------------------VAVGDLEAANELFERMP---- 81
G+ ++ LE ++F R
Sbjct: 422 TNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGL 481
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D D V + +ID + G V F+ M + V WNSM++ + +E + +F +
Sbjct: 482 DSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKK 541
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV-DVLLSTCLLTMYVKC 200
M +G P + T + VLTAC + G + G + +K ++ V D +C++ + +
Sbjct: 542 MSVAG-IRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARA 600
Query: 201 GAMDLARDVFDEMPVR-NVVSWNSMIMG---YGLHGNGEKALELFLEME 245
G ++ A ++ +EMP + W+S++ G G G+KA E +E+E
Sbjct: 601 GYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELE 649
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 16/136 (11%)
Query: 156 VSVLTACAHLGKLSVGMWVHS---FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
V +L +C+ + + +W + +K + V+++ LL MY + G M +AR++FDE
Sbjct: 30 VRLLQSCSSRNRET--LWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDE 87
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
MP RN SWN+MI GY G +L F M P+ + ++ V+S AG +
Sbjct: 88 MPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM----PERDGYSWNVVVSGFAKAGEL--- 140
Query: 273 WWYFDLMRRVYNIEPK 288
+ RR++N P+
Sbjct: 141 ----SVARRLFNAMPE 152
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 191/371 (51%), Gaps = 39/371 (10%)
Query: 28 SMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFER---MPDRD 84
+++D + K ARKLFDE+P R+ WN MI+ Y G ++ A EL+E MP+
Sbjct: 88 ALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES 147
Query: 85 VVSWNCMIDGCVRVGNVPL-ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM 143
S+N +I G V + A+EF+ +M + R K
Sbjct: 148 --SFNAIIKGLVGTEDGSYRAIEFYRKM-------------IEFRFK------------- 179
Query: 144 ESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAM 203
PN TL+++++AC+ +G + +HS+ N I+ L + L+ Y +CG++
Sbjct: 180 ------PNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSI 233
Query: 204 DLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
+ VFD M R+VV+W+S+I Y LHG+ E AL+ F EME P+D F+ VL AC
Sbjct: 234 VYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKAC 293
Query: 264 THAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXX 323
+HAG+ E YF M+ Y + +HY C+VD+L+R G + + ++I+ + K
Sbjct: 294 SHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEK-PTAK 352
Query: 324 XXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIR 383
C + + EL EI A+ L+ +EP + Y++L Y + GR ++ ER+R+ ++
Sbjct: 353 TWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMK 412
Query: 384 EKGLQKEAASS 394
E G++ SS
Sbjct: 413 ESGVKVSPGSS 423
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Query: 115 NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV-LTACAHLGKLSVGMW 173
++S L+ + + + L +F +M S A+P +A + S+ L +CA + +G
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQM-HSSFALPLDAHVFSLALKSCAAAFRPVLGGS 69
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
VH+ +N + + LL MY KC ++ AR +FDE+P RN V WN+MI Y G
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVL 260
++A+EL+ M+ PN+++F ++
Sbjct: 130 VKEAVELYEAMD---VMPNESSFNAII 153
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 191/341 (56%), Gaps = 8/341 (2%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
++D + G++ A + F+ MP R+V SWN+++A V E ++++ M G
Sbjct: 150 LLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEG-IRR 208
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
+E T+V+ L AC+HLG + G + ++N V++S + MY KCG +D A VF
Sbjct: 209 SEVTVVAALGACSHLGDVKEGENIFHGYSNDN----VIVSNAAIDMYSKCGFVDKAYQVF 264
Query: 211 DEMP-VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
++ ++VV+WN+MI G+ +HG +ALE+F ++E G KP+D +++ L+AC HAG+V
Sbjct: 265 EQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLV 324
Query: 270 MEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXX 329
G F+ M +E ++HYGC+VDLL+RAG ++ + ++I +S+
Sbjct: 325 EYGLSVFNNM-ACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSM-IPDPVLWQSLL 382
Query: 330 XXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQK 389
+ D E+ EI ++ + E+ + G +++LSN YAAQGRW DV RVR + K ++K
Sbjct: 383 GASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKK 442
Query: 390 EAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
S + + +++ + S + R +Y + E+ I+
Sbjct: 443 IPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIR 483
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 134/279 (48%), Gaps = 45/279 (16%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVA------------ 66
L+ D + +++D + KNG+ +A KLFDEMPVRDV +WN +IAG V+
Sbjct: 140 LSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYK 199
Query: 67 -----------------------VGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPL 103
+GD++ +F + +V+ N ID + G V
Sbjct: 200 RMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDK 259
Query: 104 ALEFFNRMPA-RNVVSWNSML---ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
A + F + ++VV+WN+M+ A+H A L++FD++ ++G P++ + ++ L
Sbjct: 260 AYQVFEQFTGKKSVVTWNTMITGFAVHGEAH---RALEIFDKLEDNG-IKPDDVSYLAAL 315
Query: 160 TACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP-VRNV 218
TAC H G + G+ V + + ++ ++ C++ + + G + A D+ M + +
Sbjct: 316 TACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDP 375
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
V W S++ ++ + E A E+++ G ND FV
Sbjct: 376 VLWQSLLGASEIYSDVEMAEIASREIKEMGVN-NDGDFV 413
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 91/214 (42%), Gaps = 29/214 (13%)
Query: 59 CMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVS 118
C I+ + GDL A ++F +P WN +I G + LA ++
Sbjct: 45 CAISPF---GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYR--------- 92
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
SML + + + T L ACA S +H I
Sbjct: 93 --SMLQQSSSSSAICRV---------------DALTCSFTLKACARALCSSAMDQLHCQI 135
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
+ D LL T LL Y K G + A +FDEMPVR+V SWN++I G +A+
Sbjct: 136 NRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAM 195
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
EL+ ME +G + ++ T V L AC+H G V EG
Sbjct: 196 ELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 175/308 (56%), Gaps = 8/308 (2%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
A + F+ +P +VV W+ ++ +VR E L++F EM+ G P+E ++ + LTACA
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLE-PDEFSVTTALTACA 229
Query: 164 HLGKLSVGMWVHSFIKSNN-IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
+G L+ G W+H F+K + I+ DV + T L+ MY KCG ++ A +VF ++ RNV SW
Sbjct: 230 QVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWA 289
Query: 223 SMIMGYGLHGNGEKALELFLEMEKK-GPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
++I GY +G +KA+ +E++ G KP+ + VL+AC H G + EG + M
Sbjct: 290 ALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEA 349
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELG 341
Y I PK EHY CIVDL+ RAG + ++ LI+ + +K C TH + ELG
Sbjct: 350 RYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMK-PLASVWGALLNGCRTHKNVELG 408
Query: 342 EIVAKRLIELEPMDI----GPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVH 397
E+ K L++LE ++ + LSN Y + R + +VR MI ++G++K SV+
Sbjct: 409 ELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLE 468
Query: 398 LEDFESKY 405
++ +K+
Sbjct: 469 VDGNVTKF 476
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 111/216 (51%), Gaps = 3/216 (1%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM--ESGEAVPNEATLVSVLTA 161
A F+ + N +++M+ + R+ L+ F M+ E + P+ T ++ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKV-DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
C SVG +H ++ N + + D + T +L +YV+ + AR VFDE+P +VV
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVK 185
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
W+ ++ GY G G + LE+F EM KG +P++ + L+AC G + +G W + ++
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 281 RVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVS 316
+ IE V +VD+ A+ G ++ + E+ K ++
Sbjct: 246 KKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT 281
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 131/269 (48%), Gaps = 28/269 (10%)
Query: 10 DARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYV 65
DAR +FD D+V ++ +++G+V+ G ++F EM V+ D ++ +
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACA 229
Query: 66 AVGDLEAANELFERMPDR-----DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWN 120
VG L + E + + DV ++D + G + A+E F ++ RNV SW
Sbjct: 230 QVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWA 289
Query: 121 SML---ALHVRAKSFWECLKMFDEMMESGEAV-PNEATLVSVLTACAHLGKLSVGMWVHS 176
+++ A + AK CL E +E + + P+ L+ VL ACAH G L G S
Sbjct: 290 ALIGGYAAYGYAKKAMTCL----ERLEREDGIKPDSVVLLGVLAACAHGGFLEEG---RS 342
Query: 177 FIKSNNIKVDVLLS----TCLLTMYVKCGAMDLARDVFDEMPVRNVVS-WNSMIMGYGLH 231
+++ + ++ +C++ + + G +D A ++ ++MP++ + S W +++ G H
Sbjct: 343 MLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTH 402
Query: 232 GN---GEKALELFLEMEKKGPKPNDATFV 257
N GE A++ L++EK + +A V
Sbjct: 403 KNVELGELAVKNLLDLEKGNVEEEEAALV 431
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 200/407 (49%), Gaps = 24/407 (5%)
Query: 5 FGRVSDARLLFDS-SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAG 63
G ++ A L ++ S T DL S+NS+I G +G + + F M + +
Sbjct: 526 LGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLI--- 582
Query: 64 YVAVGDLEAANEL-------------FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+G + A+ L + + + D N +I R ++ A++ F
Sbjct: 583 -TLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGL 641
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
+ N+ SWN +++ + K+ E ++F + + PNE T V +L+A LG S
Sbjct: 642 ISDPNLCSWNCVISALSQNKAGREVFQLFRNL----KLEPNEITFVGLLSASTQLGSTSY 697
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
GM H + + + +S L+ MY CG ++ VF V ++ +WNS+I +G
Sbjct: 698 GMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGF 757
Query: 231 HGNGEKALELFLEMEKKGP-KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKV 289
HG GEKA+ELF E+ +PN ++F+ +LSAC+H+G + EG Y+ M + ++P
Sbjct: 758 HGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVT 817
Query: 290 EHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
EH IVD+L RAG ++ + E I + + C H D++LG+ VA+ L
Sbjct: 818 EHRVWIVDMLGRAGKLREAYEFITGIG-EPQKAGVWGALLSACNYHGDTKLGKEVAEVLF 876
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
E+EP + YI L+NTY G W++ R+R M+ + L+K SV+
Sbjct: 877 EMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVI 923
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 146/341 (42%), Gaps = 68/341 (19%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNC- 59
MY G + A LLF ++ DLVS+NSMI +NG T A+ LF E+ V ++C
Sbjct: 438 MYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV----VSEYSCS 493
Query: 60 -------------------MIAG------YVAVGDLEAANELFERMPD-RDVVSWNCMID 93
+I G +GDL +A E M + RD+ SWN +I
Sbjct: 494 KFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVIS 553
Query: 94 GCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA 153
GC G+ H+ E L+ F M G+ +
Sbjct: 554 GCASSGH-------------------------HL------ESLRAFQAMSREGKIRHDLI 582
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM 213
TL+ ++A +LG + G H + ++D L L+TMY +C ++ A VF +
Sbjct: 583 TLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLI 642
Query: 214 PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGW 273
N+ SWN +I + G + +LF ++ +PN+ TFV +LSA T G G
Sbjct: 643 SDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGM 699
Query: 274 W-YFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
+ L+RR + P V +VD+ + G+++ ++ +
Sbjct: 700 QAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFR 738
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 147/340 (43%), Gaps = 43/340 (12%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFE 78
L DL + + ++ + + GE ++ LFDE+ +DV WN MI G AA LF
Sbjct: 118 LLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFI 177
Query: 79 RMPDR---------------------------------------DVVSWNCMIDGCVRVG 99
M + D N +++ +
Sbjct: 178 EMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGE 237
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
N+ A F M R++VSWN+++ + + L+ F M SG+ + T V+
Sbjct: 238 NLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEA-DTVTFSCVI 296
Query: 160 TACAHLGKLSVGMWVHSF-IKSN-NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
+AC+ + +L++G +H IKS + + V + +++MY KCG + A VF+E+ R+
Sbjct: 297 SACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRD 356
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGP-KPNDATFVCVLSACTHAGMVMEGWWYF 276
V+S N+++ G+ +G E+A + +M+ +P+ AT V + S C EG
Sbjct: 357 VISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVH 416
Query: 277 DLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVS 316
R+ +E ++D+ + GL +E L K +
Sbjct: 417 GYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTT 456
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 13/285 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+Y+ +S A +F D+VS+N+++ + NG + + F M D
Sbjct: 232 LYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVT 291
Query: 57 WNCMIAGYVAVGDLEAANELFERM------PDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
++C+I+ ++ +L L + P+ V N +I + G+ A F
Sbjct: 292 FSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEE 351
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
+ R+V+S N++L F E + ++M + P+ AT+VS+ + C L
Sbjct: 352 LVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSRE 411
Query: 171 GMWVHSFIKSNNIKVDVL-LSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
G VH + ++ L + ++ MY KCG A +F R++VSWNSMI +
Sbjct: 412 GRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFS 471
Query: 230 LHGNGEKALELFLEM--EKKGPKPNDATFVCVLSACTHAGMVMEG 272
+G KA LF E+ E K + +T + +L++C + ++ G
Sbjct: 472 QNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFG 516
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
VH F + D+ S+ LLT Y + G + + +FDE+ ++V+ WNSMI +G
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168
Query: 234 GEKALELFLEMEKKG 248
A+ LF+EM KG
Sbjct: 169 YIAAVGLFIEMIHKG 183
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 226/470 (48%), Gaps = 54/470 (11%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGY------------ 64
+ +D+ NS+ ++ G A KLF M +D+ +W MI+GY
Sbjct: 326 TGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDT 385
Query: 65 -----------------------VAVGDLEAANELFERMPDRDVVSW----NCMIDGCVR 97
+GDL+ EL + ++S+ N +I+ +
Sbjct: 386 YRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSK 445
Query: 98 VGNVPLALEFFNRMPARNVVSWNSMLA-LHVRAKSFWECLKMFDEMMESGEAVPNEATLV 156
+ AL+ F+ +P +NV+SW S++A L + + F E L +M + + PN TL
Sbjct: 446 CKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCF-EALIFLRQMKMTLQ--PNAITLT 502
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
+ L ACA +G L G +H+ + + +D L LL MYV+CG M+ A F+ +
Sbjct: 503 AALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-K 561
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF 276
+V SWN ++ GY G G +ELF M K +P++ TF+ +L C+ + MV +G YF
Sbjct: 562 DVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYF 621
Query: 277 DLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHM 336
M Y + P ++HY C+VDLL RAG ++ + + I+ + V C H
Sbjct: 622 SKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPV-TPDPAVWGALLNACRIHH 679
Query: 337 DSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
+LGE+ A+ + EL+ +G YI+L N YA G+W +V +VR M++E GL +A S V
Sbjct: 680 KIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWV 739
Query: 397 HLEDFESKYFVKN-YSVHRKRI------MYSMLSELGAHIKLSPAGSIEK 439
++ + + Y K I Y +SE+G K+S + S+++
Sbjct: 740 EVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGL-TKISESSSMDE 788
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 144/279 (51%), Gaps = 16/279 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM----PVR-DVW 55
M+ FG + DA +F +L S+N ++ G+ K G A L+ M V+ DV+
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197
Query: 56 NWNCMIAGYVAVGDLEAANEL------FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFN 109
+ C++ + DL E+ + D DVV N +I V+ G+V A F+
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVV--NALITMYVKCGDVKSARLLFD 255
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV-PNEATLVSVLTACAHLGKL 168
RMP R+++SWN+M++ + E L++F M G +V P+ TL SV++AC LG
Sbjct: 256 RMPRRDIISWNAMISGYFENGMCHEGLELFFAM--RGLSVDPDLMTLTSVISACELLGDR 313
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
+G +H+++ + VD+ + L MY+ G+ A +F M +++VSW +MI GY
Sbjct: 314 RLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY 373
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
+ +KA++ + M++ KP++ T VLSAC G
Sbjct: 374 EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLG 412
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 131/271 (48%), Gaps = 41/271 (15%)
Query: 21 LDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM 80
LD+ N++I +VK G+ +AR LFD MP RD+ +WN MI+GY G ELF M
Sbjct: 229 LDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAM 288
Query: 81 P----DRDVVSWNCMIDGCVRVGNVPL--------------------------------- 103
D D+++ +I C +G+ L
Sbjct: 289 RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSW 348
Query: 104 --ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
A + F+RM +++VSW +M++ + + + + MM+ P+E T+ +VL+A
Sbjct: 349 REAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY-RMMDQDSVKPDEITVAAVLSA 407
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
CA LG L G+ +H + V+++ L+ MY KC +D A D+F +P +NV+SW
Sbjct: 408 CATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISW 467
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
S+I G L+ +AL +FL K +PN
Sbjct: 468 TSIIAGLRLNNRCFEAL-IFLRQMKMTLQPN 497
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 206/436 (47%), Gaps = 49/436 (11%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW----N 56
MY FG+V AR LFD D VS+N++I+ + + G A KL D M + V
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDV-------------------VSW--------- 88
WN + G + G+ A M + +V + W
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 89 -------------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWEC 135
N +I R ++ A F ++ A ++ +WNS+++ + E
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET 407
Query: 136 LKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI-KSNNIKVDVLLSTCLL 194
+ EM+ SG PN TL S+L A +G L G H +I + + K ++L L+
Sbjct: 408 SFLLKEMLLSGFH-PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLV 466
Query: 195 TMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDA 254
MY K G + A+ VFD M R+ V++ S+I GYG G GE AL F +M++ G KP+
Sbjct: 467 DMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHV 526
Query: 255 TFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKY 314
T V VLSAC+H+ +V EG W F M V+ I ++EHY C+VDL RAG + + ++
Sbjct: 527 TMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHT 586
Query: 315 VSVKXXXXXXXXXXXXXCTTHMDSELGEIVA-KRLIELEPMDIGPYIMLSNTYAAQGRWD 373
+ + C H ++ +GE A K L+E +P +G Y++L++ YA G W
Sbjct: 587 IPYE-PSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 645
Query: 374 DVERVRVMIREKGLQK 389
+ V+ ++ + G+QK
Sbjct: 646 KLVTVKTLLSDLGVQK 661
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 134/305 (43%), Gaps = 39/305 (12%)
Query: 5 FGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGY 64
+GRV + SS +L N++I + + G+ AR+LFD M RD +WN +I Y
Sbjct: 202 YGRVVHGSIEV-SSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCY 260
Query: 65 VAVGDLEAANELFERM----PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWN 120
+ L A +L +RM + +V+WN + GC+ GN AL M RN
Sbjct: 261 TSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGM--RNC---- 314
Query: 121 SMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF-IK 179
+VR S +++ L AC+H+G L G H I+
Sbjct: 315 -----NVRIGS---------------------VAMINGLKACSHIGALKWGKVFHCLVIR 348
Query: 180 SNNIKVDV-LLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
S + D+ + L+TMY +C + A VF ++ ++ +WNS+I G+ + E+
Sbjct: 349 SCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETS 408
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDL 298
L EM G PN T +L G + G + + R + + + + +VD+
Sbjct: 409 FLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDM 468
Query: 299 LARAG 303
A++G
Sbjct: 469 YAKSG 473
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
WN ++ ++R K F E + ++ MM G +E T SV+ ACA L + G VH I
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKG-IRADEFTYPSVIKACAALLDFAYGRVVHGSI 210
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
+ ++ + ++ + L++MY + G +D+AR +FD M R+ VSWN++I Y +A
Sbjct: 211 EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAF 270
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACTHAG 267
+L M G + + T+ + C AG
Sbjct: 271 KLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 206/436 (47%), Gaps = 49/436 (11%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW----N 56
MY FG+V AR LFD D VS+N++I+ + + G A KL D M + V
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDV-------------------VSW--------- 88
WN + G + G+ A M + +V + W
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 89 -------------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWEC 135
N +I R ++ A F ++ A ++ +WNS+++ + E
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET 407
Query: 136 LKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI-KSNNIKVDVLLSTCLL 194
+ EM+ SG PN TL S+L A +G L G H +I + + K ++L L+
Sbjct: 408 SFLLKEMLLSGFH-PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLV 466
Query: 195 TMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDA 254
MY K G + A+ VFD M R+ V++ S+I GYG G GE AL F +M++ G KP+
Sbjct: 467 DMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHV 526
Query: 255 TFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKY 314
T V VLSAC+H+ +V EG W F M V+ I ++EHY C+VDL RAG + + ++
Sbjct: 527 TMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHT 586
Query: 315 VSVKXXXXXXXXXXXXXCTTHMDSELGEIVA-KRLIELEPMDIGPYIMLSNTYAAQGRWD 373
+ + C H ++ +GE A K L+E +P +G Y++L++ YA G W
Sbjct: 587 IPYE-PSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 645
Query: 374 DVERVRVMIREKGLQK 389
+ V+ ++ + G+QK
Sbjct: 646 KLVTVKTLLSDLGVQK 661
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 134/305 (43%), Gaps = 39/305 (12%)
Query: 5 FGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGY 64
+GRV + SS +L N++I + + G+ AR+LFD M RD +WN +I Y
Sbjct: 202 YGRVVHGSIEV-SSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCY 260
Query: 65 VAVGDLEAANELFERM----PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWN 120
+ L A +L +RM + +V+WN + GC+ GN AL M RN
Sbjct: 261 TSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGM--RNC---- 314
Query: 121 SMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF-IK 179
+VR S +++ L AC+H+G L G H I+
Sbjct: 315 -----NVRIGS---------------------VAMINGLKACSHIGALKWGKVFHCLVIR 348
Query: 180 SNNIKVDV-LLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
S + D+ + L+TMY +C + A VF ++ ++ +WNS+I G+ + E+
Sbjct: 349 SCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETS 408
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDL 298
L EM G PN T +L G + G + + R + + + + +VD+
Sbjct: 409 FLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDM 468
Query: 299 LARAG 303
A++G
Sbjct: 469 YAKSG 473
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
WN ++ ++R K F E + ++ MM G +E T SV+ ACA L + G VH I
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKG-IRADEFTYPSVIKACAALLDFAYGRVVHGSI 210
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
+ ++ + ++ + L++MY + G +D+AR +FD M R+ VSWN++I Y +A
Sbjct: 211 EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAF 270
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACTHAG 267
+L M G + + T+ + C AG
Sbjct: 271 KLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 207/407 (50%), Gaps = 23/407 (5%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVA----VGDLEAA 73
D VS+NSMI + ++ E A L+ EM + D++ ++ + +G +
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263
Query: 74 NELFERMPDRDVVSWNCMIDGCVRVGNVPLALE---FFNRMPARNVVSWNSMLALHVRAK 130
+L + ++ + +ID + G + F + + ++V WN+M++ + +
Sbjct: 264 GKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNE 323
Query: 131 SFWE-CLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV-----GMWVHSFIKSNNIK 184
E +K F +M G P++ + V V +AC++L S G+ + S I SN I
Sbjct: 324 ELSEEAVKSFRQMQRIGHR-PDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRIS 382
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
V+ L+++Y K G + AR VFD MP N VS+N MI GY HG+G +AL L+ M
Sbjct: 383 VN----NALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRM 438
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
G PN TFV VLSAC H G V EG YF+ M+ + IEP+ EHY C++DLL RAG
Sbjct: 439 LDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGK 498
Query: 305 VKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSN 364
++ +E I + K C H + L E A L+ ++P+ PY+ML+N
Sbjct: 499 LEEAERFIDAMPYK-PGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLAN 557
Query: 365 TYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYS 411
YA +W+++ VR +R K ++K+ S + ++ + + +++S
Sbjct: 558 MYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWS 604
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 148/307 (48%), Gaps = 43/307 (14%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+YS GR+S AR F S+ ++ SYN ++ + K+ + AR+LFDE+P D ++N +
Sbjct: 52 LYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTL 111
Query: 61 IAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCV-------------------- 96
I+GY + AA LF+RM + D + + +I C
Sbjct: 112 ISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDS 171
Query: 97 -------------RVGNVPLALEFFNRMPA-RNVVSWNSMLALHVRAKSFWECLKMFDEM 142
+ G + A+ F M R+ VSWNSM+ + + K + L ++ EM
Sbjct: 172 YSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEM 231
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
+ G + + TL SVL A L L G H + + + + L+ Y KCG
Sbjct: 232 IFKGFKI-DMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGG 290
Query: 203 MDLARD---VFDEMPVRNVVSWNSMIMGYGLHGN-GEKALELFLEMEKKGPKPNDATFVC 258
D D VF E+ ++V WN+MI GY ++ E+A++ F +M++ G +P+D +FVC
Sbjct: 291 CDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVC 350
Query: 259 VLSACTH 265
V SAC++
Sbjct: 351 VTSACSN 357
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 4/210 (1%)
Query: 64 YVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML 123
Y G L A F + +V S+N ++ + + +A + F+ +P + VS+N+++
Sbjct: 53 YSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLI 112
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNI 183
+ + A+ + + +F M + G V + TL ++ AC ++ + +H F S
Sbjct: 113 SGYADARETFAAMVLFKRMRKLGFEV-DGFTLSGLIAACC--DRVDLIKQLHCFSVSGGF 169
Query: 184 KVDVLLSTCLLTMYVKCGAMDLARDVFDEM-PVRNVVSWNSMIMGYGLHGNGEKALELFL 242
++ +T Y K G + A VF M +R+ VSWNSMI+ YG H G KAL L+
Sbjct: 170 DSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYK 229
Query: 243 EMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
EM KG K + T VL+A T ++ G
Sbjct: 230 EMIFKGFKIDMFTLASVLNALTSLDHLIGG 259
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 16/257 (6%)
Query: 10 DARLLFDSSLTLDLVSYNSMIDGHVKNGE-TGAARKLFDEMPV----RDVWNWNCMIAGY 64
D+ +F L+ DLV +N+MI G+ N E + A K F +M D ++ C+ +
Sbjct: 296 DSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSAC 355
Query: 65 VAVGDLEAANELF-----ERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
+ ++ +P + N +I + GN+ A F+RMP N VS+
Sbjct: 356 SNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSF 415
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM-WVHSFI 178
N M+ + + E L ++ M++SG A PN+ T V+VL+ACAH GK+ G + ++
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIA-PNKITFVAVLSACAHCGKVDEGQEYFNTMK 474
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---G 234
++ I+ + +C++ + + G ++ A D MP + V+W +++ H N
Sbjct: 475 ETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALA 534
Query: 235 EKALELFLEMEKKGPKP 251
E+A + M+ P
Sbjct: 535 ERAANELMVMQPLAATP 551
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 10/153 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAA----RKLFDEMPVRDVWN 56
+Y G + DAR +FD L+ VS+N MI G+ ++G A +++ D +
Sbjct: 390 LYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKIT 449
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDR-----DVVSWNCMIDGCVRVGNVPLALEFFNRM 111
+ +++ G ++ E F M + + ++CMID R G + A F + M
Sbjct: 450 FVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAM 509
Query: 112 PAR-NVVSWNSMLALHVRAKSFWECLKMFDEMM 143
P + V+W ++L + K+ + +E+M
Sbjct: 510 PYKPGSVAWAALLGACRKHKNMALAERAANELM 542
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 225/518 (43%), Gaps = 110/518 (21%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETG-AARKLFDEMP--------- 50
MYS G AR +FD D++S+NS++ G + G G A +F +M
Sbjct: 218 MYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHV 277
Query: 51 -----------------VRDVWNW-------------NCMIAGYVAVGDLEAANELFERM 80
R + N +++ Y G LEA +F +M
Sbjct: 278 SFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQM 337
Query: 81 PDRDVVSW----------------NCMIDG------------------------------ 94
+R+VVSW N DG
Sbjct: 338 SERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGL 397
Query: 95 CVR--------VGNVPLAL-----------EFFNRMPARNVVSWNSMLALHVRAKSFWEC 135
C++ VGN + L + F + R ++SWN+M++ + E
Sbjct: 398 CIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEA 457
Query: 136 LKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV--GMWVHSFIKSNNIKVDVLLSTCL 193
LKMF + + E +PNE T SVL A A +SV G H+ + + ++S+ L
Sbjct: 458 LKMF--LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSAL 515
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPND 253
L MY K G +D + VF+EM +N W S+I Y HG+ E + LF +M K+ P+
Sbjct: 516 LDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDL 575
Query: 254 ATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
TF+ VL+AC GMV +G+ F++M VYN+EP EHY C+VD+L RAG +K +EEL+
Sbjct: 576 VTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMS 635
Query: 314 YVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWD 373
V C H + ++G VA+ +E++P G Y+ + N YA + WD
Sbjct: 636 EVP-GGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWD 694
Query: 374 DVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYS 411
+R +R+K + KEA S + + D E ++ +S
Sbjct: 695 KAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFS 732
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 141/298 (47%), Gaps = 17/298 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNG-------ETGAARKLFDEMPVRD 53
MY GR +A +F++ + D+VS+N+++ G N +A +FD
Sbjct: 120 MYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYST 179
Query: 54 VWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
++ G++ L+ + + + + D+V N I R G+ A F+ M
Sbjct: 180 ALSFCVGSEGFLL--GLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSF 237
Query: 114 RNVVSWNSMLALHVRAKSF-WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
++++SWNS+L+ + +F +E + +F +MM G + + + SV+T C H L +
Sbjct: 238 KDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVEL-DHVSFTSVITTCCHETDLKLAR 296
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H + + + L++ Y KCG ++ + VF +M RNVVSW +MI
Sbjct: 297 QIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SS 351
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDL-MRRVYNIEPKV 289
N + A+ +FL M G PN+ TFV +++A + EG L ++ + EP V
Sbjct: 352 NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV 409
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 36/209 (17%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
N ++ Y G + A +FE + D DVVSWN ++ G + +AL F RM + VV
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG---FDDNQIALNFVVRMKSAGVV 171
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
FD T + L+ C +G+ + S
Sbjct: 172 ---------------------FDAF-----------TYSTALSFCVGSEGFLLGLQLQST 199
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN-GEK 236
+ ++ D+++ +TMY + G+ AR VFDEM ++++SWNS++ G G G +
Sbjct: 200 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 259
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTH 265
A+ +F +M ++G + + +F V++ C H
Sbjct: 260 AVVIFRDMMREGVELDHVSFTSVITTCCH 288
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 175/308 (56%), Gaps = 8/308 (2%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
A + F+ +P +VV W+ ++ +VR E L++F EM+ G P+E ++ + LTACA
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRG-IEPDEFSVTTALTACA 229
Query: 164 HLGKLSVGMWVHSFIKSNN-IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
+G L+ G W+H F+K I+ DV + T L+ MY KCG ++ A +VF+++ RNV SW
Sbjct: 230 QVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWA 289
Query: 223 SMIMGYGLHGNGEKALELFLEMEKK-GPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
++I GY +G +KA +E++ G KP+ + VL+AC H G + EG + M
Sbjct: 290 ALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEA 349
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELG 341
Y I PK EHY CIVDL+ RAG + ++ +LI+ + +K C TH + ELG
Sbjct: 350 RYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMK-PLASVWGALLNGCRTHKNVELG 408
Query: 342 EIVAKRLIELEPMDI----GPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVH 397
E+ + L++LE ++ + LSN Y + R + +VR MI ++G++K S++
Sbjct: 409 ELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLE 468
Query: 398 LEDFESKY 405
++ +K+
Sbjct: 469 VDGIVTKF 476
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 3/216 (1%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM--ESGEAVPNEATLVSVLTA 161
A F+ + N +++M+ + R+ L+ F M+ E + P+ T ++ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKV-DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
C SVG +H ++ N + + D + T +L +YV+ + AR VFDE+P +VV
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVK 185
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
W+ ++ GY G G + LE+F EM +G +P++ + L+AC G + +G W + ++
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 281 RVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVS 316
+ IE V +VD+ A+ G ++ + E+ + ++
Sbjct: 246 KKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLT 281
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 20/265 (7%)
Query: 10 DARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYV 65
DAR +FD D+V ++ +++G+V+ G ++F EM VR D ++ +
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACA 229
Query: 66 AVGDLEAANELFE-----RMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWN 120
VG L + E R + DV ++D + G + A+E F ++ RNV SW
Sbjct: 230 QVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWA 289
Query: 121 SML---ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
+++ A + AK CL D + P+ L+ VL ACAH G L G +
Sbjct: 290 ALIGGYAAYGYAKKATTCL---DRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLEN 346
Query: 178 IKSN-NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS-WNSMIMGYGLHGN-- 233
+++ I +C++ + + G +D A D+ ++MP++ + S W +++ G H N
Sbjct: 347 MEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVE 406
Query: 234 -GEKALELFLEMEKKGPKPNDATFV 257
GE A++ L++EK + +A V
Sbjct: 407 LGELAVQNLLDLEKGNVEEEEAALV 431
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 192/360 (53%), Gaps = 5/360 (1%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDR-DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV 116
N ++ Y G++E A+++F + +R +VS+N ++ G V G+ A F M ++
Sbjct: 474 NALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDL 533
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
+W+ M+ ++ + E + +F E+ G PN T++++L CA L L + H
Sbjct: 534 TTWSLMVRIYAESCCPNEAIGVFREIQARGMR-PNTVTIMNLLPVCAQLASLHLVRQCHG 592
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
+I + D+ L LL +Y KCG++ A VF R++V + +M+ GY +HG G++
Sbjct: 593 YIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKE 651
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIV 296
AL ++ M + KP+ +L+AC HAG++ +G +D +R V+ ++P +E Y C V
Sbjct: 652 ALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAV 711
Query: 297 DLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDI 356
DL+AR G + ++ + + V+ CTT+ +LG VA L++ E D
Sbjct: 712 DLIARGGRLDDAYSFVTQMPVE-PNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDT 770
Query: 357 GPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKR 416
G ++++SN YAA +W+ V +R ++++K ++K A S + + D + FV H +R
Sbjct: 771 GNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEV-DGQRNVFVSGDCSHPRR 829
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 114/243 (46%), Gaps = 14/243 (5%)
Query: 1 MYSVFGRV-SDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNC 59
MY+ FG + DA FD D+VS+N++I G +N A + F M
Sbjct: 166 MYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYA 225
Query: 60 MIAGYVAVGD-------LEAANELFERMPDRD-----VVSWNCMIDGCVRVGNVPLALEF 107
IA + V + ++ + R V N ++ +RVG + A
Sbjct: 226 TIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASL 285
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F RM ++++VSWN ++A + +++ ++F ++ G+ P+ T++S+L CA L
Sbjct: 286 FTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTD 345
Query: 168 LSVGMWVHSFI-KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
L+ G +HS+I + + + D + L++ Y + G A F M ++++SWN+++
Sbjct: 346 LASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILD 405
Query: 227 GYG 229
+
Sbjct: 406 AFA 408
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 15/279 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDG-HVKNG-ETGAARKL--FDEMPVRDVWN 56
MY+ R+ D + +F +LD V +N ++ G V G ET K F + P
Sbjct: 65 MYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVT 124
Query: 57 WNCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNV-PLALEFFNRM 111
+ ++ V +GD + + ++D + N ++ + G + P A F+ +
Sbjct: 125 FAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGI 184
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK---L 168
++VVSWN+++A + + F M++ PN AT+ +VL CA + K
Sbjct: 185 ADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKE-PTEPNYATIANVLPVCASMDKNIAC 243
Query: 169 SVGMWVHSFIKSNN-IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
G +HS++ + ++ V + L++ Y++ G ++ A +F M +++VSWN +I G
Sbjct: 244 RSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAG 303
Query: 228 YGLHGNGEKALELFLEMEKKGP-KPNDATFVCVLSACTH 265
Y + KA +LF + KG P+ T + +L C
Sbjct: 304 YASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQ 342
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 148/368 (40%), Gaps = 68/368 (18%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM----------- 49
Y GR+ +A LF + DLVS+N +I G+ N E A +LF +
Sbjct: 272 FYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSV 331
Query: 50 ------PV------------------------RDVWNWNCMIAGYVAVGDLEAANELFER 79
PV D N +I+ Y GD AA F
Sbjct: 332 TIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSL 391
Query: 80 MPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR-------NVVSWNSMLALHVRAKSF 132
M +D++SWN ++D + P +F N + + V+ S+L + +
Sbjct: 392 MSTKDIISWNAILDA---FADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGI 448
Query: 133 WECLKMFDEMMESGEAVPNEATLV--SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLS 190
+ ++ +++G E + ++L A A G + + H + + ++
Sbjct: 449 GKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVE---YAHKIFLGLSERRTLVSY 505
Query: 191 TCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPK 250
LL+ YV G+ D A+ +F EM ++ +W+ M+ Y +A+ +F E++ +G +
Sbjct: 506 NSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Query: 251 PNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPK-----VEHYGCIVDLLARAGLV 305
PN T + +L C + L+R+ + + + G ++D+ A+ G +
Sbjct: 566 PNTVTIMNLLPVCAQLASL-------HLVRQCHGYIIRGGLGDIRLKGTLLDVYAKCGSL 618
Query: 306 KNSEELIK 313
K++ + +
Sbjct: 619 KHAYSVFQ 626
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 26/247 (10%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
G DA++LF T DL +++ M+ + ++ A +F E+ R + I +
Sbjct: 516 GSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLL 575
Query: 66 AVGDLEAANELFE-------RMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVS 118
V A+ L R D+ ++D + G++ A F R++V
Sbjct: 576 PVCAQLASLHLVRQCHGYIIRGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVM 635
Query: 119 WNSML---ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVH 175
+ +M+ A+H R K E L ++ M ES P+ + ++LTAC H G + G+ ++
Sbjct: 636 FTAMVAGYAVHGRGK---EALMIYSHMTES-NIKPDHVFITTMLTACCHAGLIQDGLQIY 691
Query: 176 SFIKS-NNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV-----------RNVVSWNS 223
I++ + +K + C + + + G +D A +MPV R ++N
Sbjct: 692 DSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNR 751
Query: 224 MIMGYGL 230
M +G+ +
Sbjct: 752 MDLGHSV 758
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Query: 155 LVSVLTACAHLGKLSVGMWVHSFI-KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM 213
+ V+ ACA + L+ G +H + K +I + S +L MY KC MD + +F +M
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEV-SKSVLNMYAKCRRMDDCQKMFRQM 82
Query: 214 PVRNVVSWNSMIMGYGLHGNGEKALELFLEME-KKGPKPNDATFVCVLSACTHAG 267
+ V WN ++ G + G + + F M PKP+ TF VL C G
Sbjct: 83 DSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLG 136
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 194/396 (48%), Gaps = 46/396 (11%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY R+ AR +FD + + DL S+ S + G+ +G T AR+LFD MP R++ +WN M
Sbjct: 307 MYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAM 366
Query: 61 IAGYV-----------------------------------AVGDLEAANE----LFERMP 81
+ GYV + D++ + ++
Sbjct: 367 LGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGY 426
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA-RNVVSWNSMLALHVRAKSFWECLKMFD 140
D +V+ N ++D + G + A +F +M R+ VSWN++L R + L F+
Sbjct: 427 DTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFE 486
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
M EA P++ TL ++L CA++ L++G +H F+ + K+DV++ ++ MY KC
Sbjct: 487 GMQV--EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKC 544
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
D A +VF E R+++ WNS+I G +G ++ ELF+ +E +G KP+ TF+ +L
Sbjct: 545 RCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGIL 604
Query: 261 SACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXX 320
AC G V G+ YF M Y+I P+VEHY C+++L + G + EE + +
Sbjct: 605 QACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFD-P 663
Query: 321 XXXXXXXXXXXCTTHMDSELGEIVAKRLIE---LEP 353
C + S+LG AKRL+ L+P
Sbjct: 664 PMQMLTRINDACQRYRWSKLGAWAAKRLMNDHYLQP 699
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 135/301 (44%), Gaps = 47/301 (15%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
N I+ + K G AR+LF+EMP RD +WN +I G + +F RM +RD V
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRM-NRDGV 158
Query: 87 -----SWNCMIDGCVRV-------------------GNVPL----------------ALE 106
S+ ++ C + GNV L A
Sbjct: 159 RATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARR 218
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F+ + + VSWN ++ ++ E + MF +M+E P T+ SV+ AC+
Sbjct: 219 VFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELN-VRPLNHTVSSVMLACSRSL 277
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
L VG +H+ ++ D ++ST + MYVKC ++ AR VFD+ +++ SW S +
Sbjct: 278 ALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMS 337
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR-VYNI 285
GY + G +A ELF M P+ N ++ +L HA E + LMR+ + NI
Sbjct: 338 GYAMSGLTREARELFDLM----PERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI 393
Query: 286 E 286
+
Sbjct: 394 D 394
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 13/122 (10%)
Query: 197 YVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATF 256
Y KCG +D AR++F+EMP R+ SWN++I +G ++ +F M + G + + +F
Sbjct: 106 YGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSF 165
Query: 257 VCVLSACTHAGMVMEGWWYFDLMRRV------YNIEPKVEHYGCIVDLLARAGLVKNSEE 310
VL +C G++++ L+R++ Y V+ IVD+ + ++ ++
Sbjct: 166 AGVLKSC---GLILD----LRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARR 218
Query: 311 LI 312
+
Sbjct: 219 VF 220
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 159/290 (54%), Gaps = 1/290 (0%)
Query: 97 RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLV 156
+ +V L F ++ ++SWNS+++ V++ ++F +MM +G +P+ T+
Sbjct: 394 KFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIA 453
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
S+L C+ L L++G +H + NN + + + T L+ MY KCG A VF +
Sbjct: 454 SLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAP 513
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF 276
+WNSMI GY L G +AL +LEM +KG KP++ TF+ VLSAC H G V EG F
Sbjct: 514 CTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICF 573
Query: 277 DLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHM 336
M + + I P ++HY +V LL RA L + LI + +K C H
Sbjct: 574 RAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIK-PDSAVWGALLSACIIHR 632
Query: 337 DSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKG 386
+ E+GE VA+++ L+ + G Y+++SN YA + WDDV RVR M+++ G
Sbjct: 633 ELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 682
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 1/181 (0%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
DR V +++ ++ G V A F+ MP R+ V WN+++ + R + K+F
Sbjct: 82 DRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIV 141
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M++ G + P+ TLV++L C G +S G VH + +++D + L++ Y KC
Sbjct: 142 MLQQGFS-PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCA 200
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+ A +F EM ++ VSWN+MI Y G E+A+ +F M +K + + T + +LS
Sbjct: 201 ELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLS 260
Query: 262 A 262
A
Sbjct: 261 A 261
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 137/335 (40%), Gaps = 40/335 (11%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
S L LD N++I + K E G+A LF EM + +WN MI Y G E A +
Sbjct: 180 SGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITV 239
Query: 77 FERMPDRDV--------------VS---WNCMIDGC----------------VRVGNVPL 103
F+ M +++V VS +C++ C R G +
Sbjct: 240 FKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVS 299
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
A + ++V S+++ + + F + + + + LV +L C
Sbjct: 300 AERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKI-DAVALVGILHGCK 358
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
+ +GM +H + + + L+ L+TMY K ++ +F+++ ++SWNS
Sbjct: 359 KSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNS 418
Query: 224 MIMGYGLHGNGEKALELFLEME-KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV 282
+I G G A E+F +M G P+ T +L+ C+ + G R
Sbjct: 419 VISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLR- 477
Query: 283 YNIEPKVEHYGC--IVDLLARAGLVKNSEELIKYV 315
N E E++ C ++D+ A+ G +E + K +
Sbjct: 478 NNFEN--ENFVCTALIDMYAKCGNEVQAESVFKSI 510
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 12/178 (6%)
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA---HLGKLSV 170
R++ ++S+L + + + +F +++ S PN T+ L A + KL V
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRS-SLTPNHFTMSIFLQATTTSFNSFKLQV 69
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
V + + + + V + T LL +Y+K G + A+ +FDEMP R+ V WN++I GY
Sbjct: 70 EQ-VQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPK 288
+G A +LF+ M ++G P+ T V +L C G V +G R V+ + K
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG-------RSVHGVAAK 179
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 10/175 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR-----DVW 55
MYS F V LF+ L+S+NS+I G V++G A ++F +M + D
Sbjct: 391 MYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAI 450
Query: 56 NWNCMIAGYVAVGDLEAANELFERMPDRDVVSWN----CMIDGCVRVGNVPLALEFFNRM 111
++AG + L EL + + N +ID + GN A F +
Sbjct: 451 TIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSI 510
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
A +WNSM++ + + L + EM E G P+E T + VL+AC H G
Sbjct: 511 KAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLK-PDEITFLGVLSACNHGG 564
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 183/336 (54%), Gaps = 8/336 (2%)
Query: 75 ELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWE 134
E+ + D DV N +I A + F+ M RNVVSWNS++ V
Sbjct: 138 EVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNL 197
Query: 135 CLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLL 194
+ F EM+ P+E T+V +L+AC G LS+G VHS + ++++ L T L+
Sbjct: 198 VFECFCEMI-GKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALV 254
Query: 195 TMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP-KPND 253
MY K G ++ AR VF+ M +NV +W++MI+G +G E+AL+LF +M K+ +PN
Sbjct: 255 DMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNY 314
Query: 254 ATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
TF+ VL AC+H G+V +G+ YF M +++ I+P + HYG +VD+L RAG + + + IK
Sbjct: 315 VTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIK 374
Query: 314 YVSVKXXXXXXXXXXXXXCTTHMDSE---LGEIVAKRLIELEPMDIGPYIMLSNTYAAQG 370
+ + C+ H D + +GE V KRLIELEP G ++++N +A
Sbjct: 375 KMPFE-PDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEAR 433
Query: 371 RWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYF 406
W + VR +++E ++K A S + L ++F
Sbjct: 434 MWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFF 469
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 14/261 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM-PVRDVWNWNC 59
+Y + SDAR +FD ++VS+NS++ V+NG+ + F EM R +
Sbjct: 157 LYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETT 216
Query: 60 MIAGYVAVGDLEAANELFERMPDRDVVSWNC-----MIDGCVRVGNVPLALEFFNRMPAR 114
M+ A G + +L + NC ++D + G + A F RM +
Sbjct: 217 MVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDK 276
Query: 115 NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM-W 173
NV +W++M+ + E L++F +MM+ PN T + VL AC+H G + G +
Sbjct: 277 NVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKY 336
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLH- 231
H K + IK ++ ++ + + G ++ A D +MP + V W +++ +H
Sbjct: 337 FHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHH 396
Query: 232 -----GNGEKALELFLEMEKK 247
G GEK + +E+E K
Sbjct: 397 DEDDEGIGEKVKKRLIELEPK 417
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
+WN + + + S E + ++ EM G PN+ T +L ACA L+ G +
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRG-IKPNKLTFPFLLKACASFLGLTAGRQIQVE 138
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
+ + DV + L+ +Y C AR VFDEM RNVVSWNS++ +G
Sbjct: 139 VLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLV 198
Query: 238 LELFLEMEKKGPKPNDATFVCVLSAC 263
E F EM K P++ T V +LSAC
Sbjct: 199 FECFCEMIGKRFCPDETTMVVLLSAC 224
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 184 bits (468), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 210/428 (49%), Gaps = 49/428 (11%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D+ NS+ID + K + +A ++FDE R++ +WN ++AG+V + A E+F M
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 82 DRDV---------------------------------------VSWNCMIDGCVRVGNVP 102
V V+ + +ID V
Sbjct: 321 QEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVD 380
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
A + M ++VVS ++M++ A E + +F M ++ PN T++S+L AC
Sbjct: 381 DAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT----PNAITVISLLNAC 436
Query: 163 AHLGKLSVGMWVHSFIKSNNIKV-DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
+ L W H ++ + D+ + T ++ Y KCGA+++AR FD++ +N++SW
Sbjct: 437 SVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISW 496
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
+I Y ++G +KAL LF EM++KG PN T++ LSAC H G+V +G F M
Sbjct: 497 TVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVE 556
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXX-XXXXXXCTTHMDSEL 340
+ +P ++HY CIVD+L+RAG + + ELIK + C +
Sbjct: 557 -EDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLI 615
Query: 341 --GEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHL 398
E+VA+ ++ELEP+ Y++ S+T+AA+ W+DV +R +++E+ ++ A S+V
Sbjct: 616 ITSEVVAE-VLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVRE 674
Query: 399 EDFESKYF 406
+ ++
Sbjct: 675 GNLAKRFL 682
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 141/325 (43%), Gaps = 47/325 (14%)
Query: 36 NGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM-------PD------ 82
+ ++ +ARKLFDEM RDV +W+ +I YV + +LF+ M PD
Sbjct: 172 DSDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTS 231
Query: 83 ----------------------------RDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR 114
DV N +ID + +V A F+ R
Sbjct: 232 VLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR 291
Query: 115 NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV 174
N+VSWNS+LA V + + E L+MF M++ V +E T+VS+L C + +
Sbjct: 292 NIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEV-DEVTVVSLLRVCKFFEQPLPCKSI 350
Query: 175 HSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNG 234
H I + + + + L+ Y C +D A V D M ++VVS ++MI G G
Sbjct: 351 HGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRS 410
Query: 235 EKALELFLEMEKKGPKPNDATFVCVLSACT-HAGMVMEGWWYFDLMRRVYNIEPKVEHYG 293
++A+ +F M PN T + +L+AC+ A + W + +RR I +
Sbjct: 411 DEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN-DISVGT 466
Query: 294 CIVDLLARAGLVKNSEELIKYVSVK 318
IVD A+ G ++ + ++ K
Sbjct: 467 SIVDAYAKCGAIEMARRTFDQITEK 491
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWN----SMLALHVRAKSFWECLKMFDEMME 144
N + D ++ G++ L F+ M +R+ VSWN +L + W K+ E
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
PN +TLV V+ AC L G +H ++ + + +L MY ++
Sbjct: 125 -----PNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS 177
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM-EKKGPKPNDATFVCVLSAC 263
AR +FDEM R+V+SW+ +I Y L+LF EM + +P+ T VL AC
Sbjct: 178 -ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 264 T 264
T
Sbjct: 237 T 237
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 179/342 (52%), Gaps = 49/342 (14%)
Query: 1 MYSVFGRVSD---ARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------PV 51
M + F +V D AR FD +VS+N+M+ G+ +NG T A +LF++M P
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 52 RDVW----------------------------NWNCMIAG-----YVAVGDLEAANELFE 78
W NC + + D+++A +F
Sbjct: 264 ETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 79 RM-PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLK 137
+ R++V+WN MI G R+G++ A + F+ MP RNVVSWNS++A + ++
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMY 197
F++M++ G++ P+E T++SVL+AC H+ L +G + +I+ N IK++ L+ MY
Sbjct: 384 FFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMY 443
Query: 198 VKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
+ G + A+ VFDEM R+VVS+N++ + +G+G + L L +M+ +G +P+ T+
Sbjct: 444 ARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYT 503
Query: 258 CVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
VL+AC AG++ EG F +R P +HY C+ DLL
Sbjct: 504 SVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 164/310 (52%), Gaps = 35/310 (11%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
N ++D +VK+ +ARK+FD++ R +WN MI+GY G+ E A +LF+ MP+ DVV
Sbjct: 140 NVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVV 199
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
SW MI G +V ++ A ++F+RMP ++VVSWN+ML+ + + + L++F++M+ G
Sbjct: 200 SWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLG 259
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC------ 200
PNE T V V++AC+ S+ + I ++++ + T LL M+ KC
Sbjct: 260 -VRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSA 318
Query: 201 --------------------------GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNG 234
G M AR +FD MP RNVVSWNS+I GY +G
Sbjct: 319 RRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQA 378
Query: 235 EKALELFLEMEKKG-PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYG 293
A+E F +M G KP++ T + VLSAC H + G D +R+ I+ Y
Sbjct: 379 ALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRK-NQIKLNDSGYR 437
Query: 294 CIVDLLARAG 303
++ + AR G
Sbjct: 438 SLIFMYARGG 447
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F+ + NV NSM + + L+++++ G +P+ + V+ + G
Sbjct: 63 FDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCG-IMPDAFSFPVVIKSAGRFGI 121
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L + ++ D + ++ MYVK +++ AR VFD++ R WN MI G
Sbjct: 122 L-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISG 176
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
Y GN E+A +LF M P+ + ++ +++ + YFD M E
Sbjct: 177 YWKWGNKEEACKLFDMM----PENDVVSWTVMITGFAKVKDLENARKYFDRMP-----EK 227
Query: 288 KVEHYGCIVDLLARAGLVKNSEELI 312
V + ++ A+ G +++ L
Sbjct: 228 SVVSWNAMLSGYAQNGFTEDALRLF 252
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 195/393 (49%), Gaps = 48/393 (12%)
Query: 37 GETGAARKLFDEMPVRDV--WNWNCMIAGYVAVGDLEAANELFERM------PDR----- 83
G A ++FD M RD + WN +I+GY +G E A L+ +M PDR
Sbjct: 141 GYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPR 200
Query: 84 ----------------------------DVVSWNCMIDGCVRVGNVPLALEFFNRMPARN 115
DV N ++ + G++ A F+ +P ++
Sbjct: 201 VLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKD 260
Query: 116 VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVH 175
VSWNSML ++ E L +F M+++G P++ + SVL A + G +H
Sbjct: 261 YVSWNSMLTGYLHHGLLHEALDIFRLMVQNG-IEPDKVAISSVL---ARVLSFKHGRQLH 316
Query: 176 SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGE 235
++ ++ ++ ++ L+ +Y K G + A +FD+M R+ VSWN++I + + NG
Sbjct: 317 GWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG- 375
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
L+ F +M + KP+ TFV VLS C + GMV +G F LM + Y I+PK+EHY C+
Sbjct: 376 --LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACM 433
Query: 296 VDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMD 355
V+L RAG+++ + +I C H ++++GE+ A+RL ELEP +
Sbjct: 434 VNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDN 493
Query: 356 IGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQ 388
+ +L Y+ R +DVERVR M+ ++GL+
Sbjct: 494 EHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 144 ESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAM 203
+ G ++ S+L C L + G+ VH I ++ ++ +S+ L+ +Y CG
Sbjct: 84 QKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYA 143
Query: 204 DLARDVFDEMPVRNV--VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
++A +VFD M R+ +WNS+I GY G E A+ L+ +M + G KP+ TF VL
Sbjct: 144 EVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLK 203
Query: 262 ACTHAGMVMEG 272
AC G V G
Sbjct: 204 ACGGIGSVQIG 214
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 206/440 (46%), Gaps = 45/440 (10%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
N +I + K G + + R +FD M R+V +I+G + E LF M R +V
Sbjct: 194 NKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLM-RRGLV 252
Query: 87 SWN----------------------------------------CMIDGCVRVGNVPLALE 106
N ++D + G++ A
Sbjct: 253 HPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWT 312
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL- 165
F + VS +L + S E ++ F M+++G V +A +VS + + +
Sbjct: 313 IFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG--VEIDANVVSAVLGVSFID 370
Query: 166 GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI 225
L +G +HS + + ++ L+ MY KCG + ++ VF MP RN VSWNSMI
Sbjct: 371 NSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMI 430
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNI 285
+ HG+G AL+L+ EM KP D TF+ +L AC+H G++ +G + M+ V+ I
Sbjct: 431 AAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGI 490
Query: 286 EPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVA 345
EP+ EHY CI+D+L RAGL+K ++ I + +K C+ H D+E+GE A
Sbjct: 491 EPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLK-PDCKIWQALLGACSFHGDTEVGEYAA 549
Query: 346 KRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKY 405
++L + P +I+++N Y+++G+W + + ++ G+ KE S + +E +
Sbjct: 550 EQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSF 609
Query: 406 FVKNYSVHRKRIMYSMLSEL 425
V++ + +Y +LS L
Sbjct: 610 VVEDKLHPQAEAIYDVLSGL 629
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 124/264 (46%), Gaps = 39/264 (14%)
Query: 23 LVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM-- 80
LV +NS++ + K G+ A KLFDEMP+RDV + N + G++ + E+ L +RM
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 81 ------------------P------------------DRDVVSWNCMIDGCVRVGNVPLA 104
P D+++ N +I + G
Sbjct: 150 SGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSG 209
Query: 105 LEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
F+ M RNV++ ++++ + + + L++F +M G PN T +S L AC+
Sbjct: 210 RGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFS-LMRRGLVHPNSVTYLSALAACSG 268
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSM 224
++ G +H+ + I+ ++ + + L+ MY KCG+++ A +F+ + VS +
Sbjct: 269 SQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVI 328
Query: 225 IMGYGLHGNGEKALELFLEMEKKG 248
++G +G+ E+A++ F+ M + G
Sbjct: 329 LVGLAQNGSEEEAIQFFIRMLQAG 352
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 115/239 (48%), Gaps = 9/239 (3%)
Query: 75 ELFERMPDRDV-----VSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRA 129
E FE + D D+ V WN ++ + G + A++ F+ MP R+V+S N + +R
Sbjct: 76 EFFEPV-DADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRN 134
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
+ + M+ SG + ATL VL+ C V +H+ + ++ +
Sbjct: 135 RETESGFVLLKRMLGSGGF--DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISV 192
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP 249
L+T Y KCG R VFD M RNV++ ++I G + E L LF M +
Sbjct: 193 GNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLV 252
Query: 250 KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNS 308
PN T++ L+AC+ + ++EG L+ + Y IE ++ ++D+ ++ G ++++
Sbjct: 253 HPNSVTYLSALAACSGSQRIVEGQQIHALLWK-YGIESELCIESALMDMYSKCGSIEDA 310
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 167/313 (53%), Gaps = 16/313 (5%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAK-----SFWECLKMFDEMMESGEAV-PNE 152
G++ A + F+ MP R V+WN+M+ + K + + + +F G V P +
Sbjct: 161 GDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTD 220
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNI--KVDVLLSTCLLTMYVKCGAMDLARDVF 210
T+V VL+A + G L +G VH +I+ +VDV + T L+ MY KCG ++ A VF
Sbjct: 221 TTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVF 280
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVM 270
+ M V+NV +W SM G L+G G + L M + G KPN+ TF +LSA H G+V
Sbjct: 281 ELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVE 340
Query: 271 EGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXX 330
EG F M+ + + P +EHYGCIVDLL +AG ++ + + I + +K
Sbjct: 341 EGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIK-PDAILLRSLCN 399
Query: 331 XCTTHMDSELGEIVAKRLIELEPMD-------IGPYIMLSNTYAAQGRWDDVERVRVMIR 383
C+ + ++ +GE + K L+E+E D Y+ LSN A +G+W +VE++R ++
Sbjct: 400 ACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMK 459
Query: 384 EKGLQKEAASSVV 396
E+ ++ S V
Sbjct: 460 ERRIKTRPGYSFV 472
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 88/181 (48%), Gaps = 14/181 (7%)
Query: 151 NEATLVSVL---TACAHLGKLSVGMWVHSFIKSNNIKVDV-LLSTCLLTMYVKCGAMDLA 206
NE T V VL A L VG VH +K + L+ T LL Y K G + A
Sbjct: 107 NERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYA 166
Query: 207 RDVFDEMPVRNVVSWNSMIMGYGLHG-----NGEKALELFLEME--KKGPKPNDATFVCV 259
R VFDEMP R V+WN+MI GY H N KA+ LF G +P D T VCV
Sbjct: 167 RKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCV 226
Query: 260 LSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY--GCIVDLLARAGLVKNSEELIKYVSV 317
LSA + G++ G + ++ P+V+ + +VD+ ++ G + N+ + + + V
Sbjct: 227 LSAISQTGLLEIGSLVHGYIEKL-GFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKV 285
Query: 318 K 318
K
Sbjct: 286 K 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 121/303 (39%), Gaps = 65/303 (21%)
Query: 4 VFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAG 63
V G V L++S L +++ + KNG+ ARK+FDEMP R WN MI G
Sbjct: 133 VHGMVKKLGFLYESELI-----GTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGG 187
Query: 64 YVAVGDLEAANE-----LFERM-------------------------------------- 80
Y + D N LF R
Sbjct: 188 YCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIE 247
Query: 81 -----PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM---LALHVRAKSF 132
P+ DV ++D + G + A F M +NV +W SM LAL+ R
Sbjct: 248 KLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGN-- 305
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLS-T 191
E + + M ESG PNE T S+L+A H+G + G+ + +K+ V+
Sbjct: 306 -ETPNLLNRMAESG-IKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYG 363
Query: 192 CLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALELFLEMEKK 247
C++ + K G + A MP++ + + S+ ++G GE+ + LE+E++
Sbjct: 364 CIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIERE 423
Query: 248 GPK 250
K
Sbjct: 424 DEK 426
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 203/413 (49%), Gaps = 11/413 (2%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D++ NS++D + K G+ ARK+FD + +DV+ WN MI GY G A ELF RM
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 82 DRD----VVSWNCMIDGCVRVGNVPLALEFFNRMP-----ARNVVSWNSMLALHVRAKSF 132
D + +++WN MI G ++ G+ A++ F RM RN +WN ++A +++
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKK 505
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
E L++F +M S +PN T++S+L ACA+L + +H + N+ +
Sbjct: 506 DEALELFRKMQFS-RFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNA 564
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
L Y K G ++ +R +F M +++++WNS+I GY LHG+ AL LF +M+ +G PN
Sbjct: 565 LTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPN 624
Query: 253 DATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
T ++ A G V EG F + Y+I P +EH +V L RA ++ + + I
Sbjct: 625 RGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFI 684
Query: 313 KYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRW 372
+ ++++ C H D ++ A+ L LEP + ++S YA +
Sbjct: 685 QEMNIQ-SETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKL 743
Query: 373 DDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
R+ L+K S + + + + + S ++Y ++ ++
Sbjct: 744 GRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKM 796
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 143/292 (48%), Gaps = 14/292 (4%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDV- 85
NS++ + K GE A K F M RDV WN ++ Y G E A EL + M +
Sbjct: 220 NSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGIS 279
Query: 86 ---VSWNCMIDGCVRVGNVPLALEFFNRMPA----RNVVSWNSMLALHVRAKSFWECLKM 138
V+WN +I G ++G A++ +M +V +W +M++ + ++ L M
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDM 339
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
F +M +G VPN T++S ++AC+ L ++ G VHS DVL+ L+ MY
Sbjct: 340 FRKMFLAG-VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYS 398
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
KCG ++ AR VFD + ++V +WNSMI GY G KA ELF M+ +PN T+
Sbjct: 399 KCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNT 458
Query: 259 VLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEE 310
++S G E F M + ++ + I+ AG ++N ++
Sbjct: 459 MISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLII-----AGYIQNGKK 505
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 121/248 (48%), Gaps = 13/248 (5%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
+C+ +G + +G + A F + DV ++ + G + A + F+ M RN+
Sbjct: 90 SCIDSGSIHLGRILHAR--FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLF 147
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
+W++M+ + R + E K+F MM+ G +P++ +L CA+ G + G +HS
Sbjct: 148 TWSAMIGAYSRENRWREVAKLFRLMMKDG-VLPDDFLFPKILQGCANCGDVEAGKVIHSV 206
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
+ + + +S +L +Y KCG +D A F M R+V++WNS+++ Y +G E+A
Sbjct: 207 VIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEA 266
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVD 297
+EL EMEK+G P T+ ++ G DLM+ K+E +G D
Sbjct: 267 VELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAA---MDLMQ-------KMETFGITAD 316
Query: 298 LLARAGLV 305
+ ++
Sbjct: 317 VFTWTAMI 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 141/354 (39%), Gaps = 76/354 (21%)
Query: 5 FGRVSDARL-LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAG 63
GR+ AR LF D+ ++ + K G ARK+FD M R+++ W+ MI
Sbjct: 99 LGRILHARFGLFTEP---DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGA 155
Query: 64 YVAVGDLEAANELFERM------PDR--------------DVVSWNCM--------IDGC 95
Y +LF M PD DV + + + C
Sbjct: 156 YSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSC 215
Query: 96 VRVGNVPLAL-----------EFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMME 144
+RV N LA+ +FF RM R+V++WNS+L + + E +++ EM +
Sbjct: 216 LRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEK 275
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
G + P T ++ LGK M + +++ I DV
Sbjct: 276 EGIS-PGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVF---------------- 318
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
+W +MI G +G +AL++F +M G PN T + +SAC+
Sbjct: 319 ---------------TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACS 363
Query: 265 HAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
++ +G + ++ I+ V +VD+ ++ G ++++ ++ V K
Sbjct: 364 CLKVINQGSEVHSIAVKMGFID-DVLVGNSLVDMYSKCGKLEDARKVFDSVKNK 416
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 198/408 (48%), Gaps = 42/408 (10%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
S L D + ++++ + K G A KLF +P D+ WN MI GY G + L
Sbjct: 135 SGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINL 194
Query: 77 FERMPDRD---------------------VVSWN----CM---ID-----GCV------R 97
F M R +V+W+ C+ +D GC R
Sbjct: 195 FNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSR 254
Query: 98 VGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
+ A FN + ++V+ +S++ + R + E L +F E+ SG+ P+ +
Sbjct: 255 CMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKK-PDCVLVAI 313
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
VL +CA L G VHS++ +++D+ + + L+ MY KCG + A +F +P +N
Sbjct: 314 VLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKN 373
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
+VS+NS+I+G GLHG A E F E+ + G P++ TF +L C H+G++ +G F+
Sbjct: 374 IVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFE 433
Query: 278 LMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMD 337
M+ + IEP+ EHY +V L+ AG ++ + E + + K C H +
Sbjct: 434 RMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQ-KPIDSGILGALLSCCEVHEN 492
Query: 338 SELGEIVAKRLIELEPMDIGPY-IMLSNTYAAQGRWDDVERVRVMIRE 384
+ L E+VA+ + + Y +MLSN YA GRWD+VER+R I E
Sbjct: 493 THLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISE 540
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
A + F+ P R+V WNS++ + +A F L +F +++ S + P+ T + +
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRS-DTRPDNFTYACLARGFS 117
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
+H + + D + + ++ Y K G + A +F +P ++ WN
Sbjct: 118 ESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNV 177
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGW 273
MI+GYG G +K + LF M+ +G +PN T V + S +++ W
Sbjct: 178 MILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAW 227
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 25/196 (12%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MYS ++ A +F+S DLV+ +S+I G+ + G A LF E+ + +C+
Sbjct: 251 MYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGK-KPDCV 309
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSW-------------NCMIDGCVRVGNVPLALEF 107
+ V L + EL + + ++V S+ + +ID + G + A+
Sbjct: 310 LVAIV----LGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSL 365
Query: 108 FNRMPARNVVSWNSM---LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
F +P +N+VS+NS+ L LH A + +E F E++E G +P+E T ++L C H
Sbjct: 366 FAGIPEKNIVSFNSLILGLGLHGFASTAFE---KFTEILEMG-LIPDEITFSALLCTCCH 421
Query: 165 LGKLSVGMWVHSFIKS 180
G L+ G + +KS
Sbjct: 422 SGLLNKGQEIFERMKS 437
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
+HSF+ + + D +T L Y + AR +FD P R+V WNS+I Y
Sbjct: 27 LHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQ 86
Query: 234 GEKALELFLEMEKKGPKPNDATFVCV 259
L LF ++ + +P++ T+ C+
Sbjct: 87 FTTVLSLFSQILRSDTRPDNFTYACL 112
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 196/406 (48%), Gaps = 12/406 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW-NWNC 59
MY FG+ +A+L+ D D+V ++I G+ + GE A K F M V V N
Sbjct: 210 MYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYT 269
Query: 60 MIAGYVAVGDLEAANE-------LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ ++ G+L+ + + + + S ++ +R V +L F +
Sbjct: 270 YASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIE 329
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
N VSW S+++ V+ L F +MM PN TL S L C++L G
Sbjct: 330 YPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS-IKPNSFTLSSALRGCSNLAMFEEGR 388
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H + D + L+ +Y KCG D+AR VFD + +V+S N+MI Y +G
Sbjct: 389 QIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNG 448
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
G +AL+LF M G +PND T + VL AC ++ +V EG FD R+ I +HY
Sbjct: 449 FGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK-DKIMLTNDHY 507
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
C+VDLL RAG ++ +E L V C H E+ E + ++++E+E
Sbjct: 508 ACMVDLLGRAGRLEEAEMLT--TEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIE 565
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHL 398
P D G I++SN YA+ G+W+ V ++ +++ L+K A S V +
Sbjct: 566 PGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEI 611
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 141/309 (45%), Gaps = 20/309 (6%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW-NWNCMIAGY 64
G + AR +FD +V++NS+I +K+ + A +++ M +V + + + +
Sbjct: 113 GDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVF 172
Query: 65 VAVGDLEAANE--------LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV 116
A DL E + + +V + ++D V+ G A +R+ ++V
Sbjct: 173 KAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDV 232
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
V +++ + + E +K F M+ + PNE T SVL +C +L + G +H
Sbjct: 233 VLITALIVGYSQKGEDTEAVKAFQSMLVE-KVQPNEYTYASVLISCGNLKDIGNGKLIHG 291
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
+ + + + T LLTMY++C +D + VF + N VSW S+I G +G E
Sbjct: 292 LMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEM 351
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIV 296
AL F +M + KPN T L C++ M EG R+++ I V YG
Sbjct: 352 ALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEG-------RQIHGI---VTKYGFDR 401
Query: 297 DLLARAGLV 305
D A +GL+
Sbjct: 402 DKYAGSGLI 410
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 116/231 (50%), Gaps = 3/231 (1%)
Query: 86 VSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMES 145
+S + ++D ++ G++ A + F+ M R++V+WNS++A ++ + E ++M+ +M +
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMY-RLMIT 158
Query: 146 GEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV-DVLLSTCLLTMYVKCGAMD 204
+P+E TL SV A + L H ++V +V + + L+ MYVK G
Sbjct: 159 NNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTR 218
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
A+ V D + ++VV ++I+GY G +A++ F M + +PN+ T+ VL +C
Sbjct: 219 EAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG 278
Query: 265 HAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYV 315
+ + G LM + E + ++ + R LV +S + K +
Sbjct: 279 NLKDIGNGKLIHGLMVK-SGFESALASQTSLLTMYLRCSLVDDSLRVFKCI 328
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 199/379 (52%), Gaps = 10/379 (2%)
Query: 26 YNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVG--------DLEAANELF 77
+NSM+ G + N E AA L ++ D+ + ++G + + L+ + +
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVV 369
Query: 78 ERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLK 137
+ D + + ++D VGN+ A + F+R+P +++++++ ++ V++
Sbjct: 370 VSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFY 429
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMY 197
+F E+++ G ++ + ++L C+ L L G +H + + + +T L+ MY
Sbjct: 430 LFRELIKLGLD-ADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMY 488
Query: 198 VKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
VKCG +D +FD M R+VVSW +I+G+G +G E+A F +M G +PN TF+
Sbjct: 489 VKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFL 548
Query: 258 CVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSV 317
+LSAC H+G++ E + M+ Y +EP +EHY C+VDLL +AGL + + ELI + +
Sbjct: 549 GLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPL 608
Query: 318 KXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVER 377
+ C TH ++ L ++A++L++ P D Y LSN YA G WD + +
Sbjct: 609 E-PDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSK 667
Query: 378 VRVMIREKGLQKEAASSVV 396
VR ++ G ++ S ++
Sbjct: 668 VREAAKKLGAKESGMSWII 686
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 156/370 (42%), Gaps = 66/370 (17%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM----------- 49
MY F +SDA +FD ++V++ +M+ G+ +G+ A +L+ M
Sbjct: 49 MYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEF 108
Query: 50 ----------------------------PVR-DVWNWNCMIAGYVAVGDLEAANELFERM 80
+R DV N ++ YV G L AN F+ +
Sbjct: 109 MYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI 168
Query: 81 PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
SWN +I G + G + A+ F+RMP NVVSWN +++ V K L+
Sbjct: 169 LRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVD-KGSPRALEFLV 227
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
M G + A L L AC+ G L++G +H + + ++ + L+ MY C
Sbjct: 228 RMQREGLVLDGFA-LPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNC 286
Query: 201 GAMDLARDVFDEMPV---RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
G++ A DVF + + +V WNSM+ G+ ++ E AL L L++ + + T
Sbjct: 287 GSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLS 346
Query: 258 CVLSAC-----------THAGMVMEGW--------WYFDLMRRVYNIEP--KVEHYGCIV 296
L C H+ +V+ G+ DL V NI+ K+ H
Sbjct: 347 GALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNK 406
Query: 297 DLLARAGLVK 306
D++A +GL++
Sbjct: 407 DIIAFSGLIR 416
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 50/255 (19%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
N++I +V A K+FDEM R++ W M++GY + G A EL+ RM D +
Sbjct: 44 NNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEE 103
Query: 87 SWN-----CMIDGCVRVGNVPLALEFFNRMPARN----VVSWNSMLALHVRAKSFWECLK 137
+ N ++ C VG++ L + + R+ N VV NS++ ++V+ E
Sbjct: 104 AANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANS 163
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMY 197
F E++ P+ + W L++ Y
Sbjct: 164 SFKEILR-----PSSTS------------------W-----------------NTLISGY 183
Query: 198 VKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
K G MD A +F MP NVVSWN +I G+ G+ +ALE + M+++G +
Sbjct: 184 CKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALP 242
Query: 258 CVLSACTHAGMVMEG 272
C L AC+ G++ G
Sbjct: 243 CGLKACSFGGLLTMG 257
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 159 LTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
L C + G + + + I +V ++ +++MYV + A VFDEM RN+
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEM-EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
V+W +M+ GY G KA+EL+ M + + N+ + VL AC G + G ++
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 278 LMRRVYNIEPKVEHYGCIVDLLARAG 303
+ + N+ V +VD+ + G
Sbjct: 132 RIGK-ENLRGDVVLMNSVVDMYVKNG 156
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 206/417 (49%), Gaps = 32/417 (7%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
G+ AR+L + S + VS + ++D + K G A ++++ + MI GY
Sbjct: 279 GKEVHARVLKNGSYSNKFVS-SGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYS 337
Query: 66 AVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLAL 125
+ G + A LF+ + ++++V W M G + + R P +S+L L
Sbjct: 338 SQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNL-----------RQP-------DSVLEL 379
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV 185
A++F + + P+ +VSVL AC+ + G +H I +
Sbjct: 380 ---ARAF----------IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILM 426
Query: 186 DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEME 245
D L T + MY KCG ++ A +FD R+ V +N+MI G HG+ K+ + F +M
Sbjct: 427 DKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMT 486
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
+ G KP++ TF+ +LSAC H G+V+EG YF M YNI P+ HY C++DL +A +
Sbjct: 487 EGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRL 546
Query: 306 KNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNT 365
+ EL++ + C+ + ++EL + V ++L+ +E + YI ++N
Sbjct: 547 DKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANA 606
Query: 366 YAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSML 422
YA+ GRWD+++R+R +R K L+ + S +++ + + S + +Y+ML
Sbjct: 607 YASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 132/268 (49%), Gaps = 39/268 (14%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
S TL VS N +++ + K+G AR +FDEM R+V++WN +IA YV +++ A EL
Sbjct: 17 SGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEAREL 76
Query: 77 FERMP-DRDVVSWNCMIDGCVRV-GNVPLALEFFNRMPAR-------NVVSWNSMLALHV 127
FE +RD++++N ++ G + G A+E F M + + + +M+ L
Sbjct: 77 FESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSA 136
Query: 128 RAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIK--- 184
+ + + ++ ++++G N+ T K +V +H + K K
Sbjct: 137 KLTNVFYGEQLHGVLVKTG----NDGT------------KFAVSSLIHMYSKCGKFKEVC 180
Query: 185 ----------VDVLLSTCLLTMYVKCGAMDLARDVFDEMP-VRNVVSWNSMIMGYGLHGN 233
VD + ++ Y + G +D A VF P + + +SWN++I GY +G
Sbjct: 181 NIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGY 240
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLS 261
E+AL++ + ME+ G K ++ +F VL+
Sbjct: 241 EEEALKMAVSMEENGLKWDEHSFGAVLN 268
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 124/293 (42%), Gaps = 48/293 (16%)
Query: 2 YSVFGRVSDARLLFDS-SLTLDLVSYNSMIDGHVK-NGETGAARKLFDEMPVR---DVW- 55
Y F V +AR LF+S + DL++YN+++ G K +G A ++F EM + D+W
Sbjct: 64 YVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWI 123
Query: 56 --------------------------------------NWNCMIAGYVAVGDLEAANELF 77
+ +I Y G + +F
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF 183
Query: 78 ER--MPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARN-VVSWNSMLALHVRAKSFWE 134
+ D V+ N MI R G++ AL F R P N +SWN+++A + + E
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEE 243
Query: 135 CLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLL 194
LKM M E+G +E + +VL + L L +G VH+ + N + +S+ ++
Sbjct: 244 ALKMAVSMEENG-LKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIV 302
Query: 195 TMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK 247
+Y KCG M A N+ S +SMI+GY G +A LF + +K
Sbjct: 303 DVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEK 355
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 199/377 (52%), Gaps = 6/377 (1%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
++V N +ID + K G A +F M +D +WN ++A G LE F +MP
Sbjct: 191 NVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP 250
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
+ D V++N +ID V+ G+ A + + MP N SWN++L +V ++ E + F +
Sbjct: 251 NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTK 310
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M SG +E +L VL A A L + G +H+ + V++++ L+ MY KCG
Sbjct: 311 MHSSGVRF-DEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCG 369
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM-EKKGPKPNDATFVCVL 260
+ A +F MP +N++ WN MI GY +G+ +A++LF ++ +++ KP+ TF+ +L
Sbjct: 370 MLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLL 429
Query: 261 SACTHAGMVMEGWW-YFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKX 319
+ C+H + ME YF++M Y I+P VEH ++ + + G V ++++I+
Sbjct: 430 AVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFG- 488
Query: 320 XXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGP--YIMLSNTYAAQGRWDDVER 377
C+ D + + VA ++IEL D YI++SN YA RW +V +
Sbjct: 489 YDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQ 548
Query: 378 VRVMIREKGLQKEAASS 394
+R ++RE G+ KE SS
Sbjct: 549 IRKIMRESGVLKEVGSS 565
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 91/165 (55%), Gaps = 6/165 (3%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
A + F+ MP +V+SWNS+++ +V++ F E + +F E+ S + PNE + + L ACA
Sbjct: 109 AHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRS-DVFPNEFSFTAALAACA 167
Query: 164 HLGKLSVGMWVHS-FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
L +G +HS +K K +V++ CL+ MY KCG MD A VF M ++ VSWN
Sbjct: 168 RLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWN 227
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
+++ +G E L F +M P P+ T+ ++ A +G
Sbjct: 228 AIVASCSRNGKLELGLWFFHQM----PNPDTVTYNELIDAFVKSG 268
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 143/313 (45%), Gaps = 31/313 (9%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
G VS+ RL +SL + +S+ D H K+FDEMP DV +WN +++GYV
Sbjct: 85 GFVSNTRL--SNSLMRFYKTSDSLEDAH----------KVFDEMPDPDVISWNSLVSGYV 132
Query: 66 AVGDLEAANELFERMPDRDV----VSWNCMIDGCVRVGNVPLALEFFNR-----MPARNV 116
G + LF + DV S+ + C R+ PL ++ + NV
Sbjct: 133 QSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNV 192
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
V N ++ ++ + + + +F M E N +++ +C+ GKL +G+W
Sbjct: 193 VVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWN-----AIVASCSRNGKLELGLWF-- 245
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
F + N D + L+ +VK G + A V +MP N SWN+++ GY +
Sbjct: 246 FHQMPN--PDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGE 303
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIV 296
A E F +M G + ++ + VL+A +V G ++ ++ +V ++
Sbjct: 304 ATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKL-GLDSRVVVASALI 362
Query: 297 DLLARAGLVKNSE 309
D+ ++ G++K++E
Sbjct: 363 DMYSKCGMLKHAE 375
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 100/201 (49%), Gaps = 2/201 (0%)
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
SW++++ R S L+ E++ GE P+ + LV +L + G +S+ +H +
Sbjct: 23 SWSTIVPALARFGSI-GVLRAAVELINDGEK-PDASPLVHLLRVSGNYGYVSLCRQLHGY 80
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
+ + + LS L+ Y +++ A VFDEMP +V+SWNS++ GY G ++
Sbjct: 81 VTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEG 140
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVD 297
+ LFLE+ + PN+ +F L+AC + G + ++ + V C++D
Sbjct: 141 ICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 298 LLARAGLVKNSEELIKYVSVK 318
+ + G + ++ + +++ K
Sbjct: 201 MYGKCGFMDDAVLVFQHMEEK 221
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 204/441 (46%), Gaps = 50/441 (11%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV------ 54
MY+ + AR L + D+VS+NSMI G V+ G G A +F M RD+
Sbjct: 271 MYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFT 330
Query: 55 --WNWNCMIAGYVAVGDLEAANELFERM--PDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
NC + +A+ L + +V+ N ++D + G + AL+ F
Sbjct: 331 IPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVN-NALVDMYAKRGIMDSALKVFEG 389
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
M ++V+SW +++ + S+ E LK+F M G P++ SVL+A A L L
Sbjct: 390 MIEKDVISWTALVTGNTHNGSYDEALKLFCN-MRVGGITPDKIVTASVLSASAELTLLEF 448
Query: 171 GMWVH-SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
G VH ++IKS + ++ L+TMY KCG+++ A +F+ M +R++++W +I+GY
Sbjct: 449 GQQVHGNYIKS-GFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYA 507
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKV 289
+ G++ + YFD MR VY I P
Sbjct: 508 KN-----------------------------------GLLEDAQRYFDSMRTVYGITPGP 532
Query: 290 EHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
EHY C++DL R+G E+L+ + V+ H + E GE AK L+
Sbjct: 533 EHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAAS-RKHGNIENGERAAKTLM 591
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKN 409
ELEP + PY+ LSN Y+A GR D+ VR +++ + + KE S V + + ++
Sbjct: 592 ELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSED 651
Query: 410 YSVHRKRIMYSMLSELGAHIK 430
R +YS + E+ IK
Sbjct: 652 RRHPRMVEIYSKVDEMMLLIK 672
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 109/230 (47%), Gaps = 33/230 (14%)
Query: 35 KNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDG 94
K+G AR++FD+MP RD + WN MI Y L A +LF P ++ +SWN +I G
Sbjct: 40 KSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISG 99
Query: 95 CVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT 154
+ G+ +E FN FWE M+S PNE T
Sbjct: 100 YCKSGS---KVEAFNL---------------------FWE--------MQSDGIKPNEYT 127
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
L SVL C L L G +H +DV + LL MY +C + A +F+ M
Sbjct: 128 LGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME 187
Query: 215 -VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
+N V+W SM+ GY +G KA+E F ++ ++G + N TF VL+AC
Sbjct: 188 GEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTAC 237
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 154/345 (44%), Gaps = 45/345 (13%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
GRV +AR +FD D ++N+MI + + A KLF PV++ +WN +I+GY
Sbjct: 42 GRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYC 101
Query: 66 AVGDLEAANELFERMP---------------------------------------DRDVV 86
G A LF M D DV
Sbjct: 102 KSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVN 161
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPA-RNVVSWNSMLALHVRAKSFWECLKMFDEMMES 145
N ++ + + A F M +N V+W SML + + ++ ++ F ++
Sbjct: 162 VVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRRE 221
Query: 146 GEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDL 205
G N+ T SVLTACA + VG+ VH I + K ++ + + L+ MY KC M+
Sbjct: 222 GNQ-SNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMES 280
Query: 206 ARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS--AC 263
AR + + M V +VVSWNSMI+G G +AL +F M ++ K +D T +L+ A
Sbjct: 281 ARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFAL 340
Query: 264 THAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNS 308
+ M + + +++ Y V + +VD+ A+ G++ ++
Sbjct: 341 SRTEMKIASSAHCLIVKTGYATYKLVNN--ALVDMYAKRGIMDSA 383
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 13/273 (4%)
Query: 1 MYSVFGRVSDARLLFDS-SLTLDLVSYNSMIDGHVKNGETGAA----RKLFDEMPVRDVW 55
MY+ R+S+A LF++ + V++ SM+ G+ +NG A R L E + +
Sbjct: 169 MYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQY 228
Query: 56 NWNCMIAGYVAVGDLEAANE----LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
+ ++ +V + + + ++ + +ID + + A M
Sbjct: 229 TFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGM 288
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK--LS 169
+VVSWNSM+ VR E L MF M E + ++ T+ S+L C L + +
Sbjct: 289 EVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKI-DDFTIPSILN-CFALSRTEMK 346
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
+ H I L++ L+ MY K G MD A VF+ M ++V+SW +++ G
Sbjct: 347 IASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNT 406
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
+G+ ++AL+LF M G P+ VLSA
Sbjct: 407 HNGSYDEALKLFCNMRVGGITPDKIVTASVLSA 439
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 187/385 (48%), Gaps = 9/385 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLF-----DEMPVR-DV 54
Y G + +AR +F++ L DLV +N+++ +V NG A L D+ R D
Sbjct: 186 FYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDY 245
Query: 55 WNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR 114
+ ++ +++ + LF+ D+ +++ + ++ A E F M R
Sbjct: 246 FTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVR 305
Query: 115 NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV 174
NVVSWN+M+ + E +++F +M+ P+E T SVL++CA + V
Sbjct: 306 NVVSWNAMIVGFAQNGEGREAMRLFGQMLLEN-LQPDELTFASVLSSCAKFSAIWEIKQV 364
Query: 175 HSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNG 234
+ + + ++ L++ Y + G + A F + ++VSW S+I HG
Sbjct: 365 QAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFA 424
Query: 235 EKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGC 294
E++L++F M +K +P+ TF+ VLSAC+H G+V EG F M Y IE + EHY C
Sbjct: 425 EESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTC 483
Query: 295 IVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPM 354
++DLL RAG + + +++ + + C H E + AK+L+E+EP
Sbjct: 484 LIDLLGRAGFIDEASDVLNSMPTE-PSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPT 542
Query: 355 DIGPYIMLSNTYAAQGRWDDVERVR 379
Y +LSN Y ++G W+ +R
Sbjct: 543 KPVNYSILSNAYVSEGHWNQAALLR 567
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 16/186 (8%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML---------ALHVRAKSFWECLKMF 139
N ++ ++ A + F+ MP RN+V+WN ++ H F ++
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRIL 134
Query: 140 DEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVK 199
+ + + + ++ C + G+ +H + ++ ST L+ Y K
Sbjct: 135 -----FTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGK 189
Query: 200 CGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM--EKKGPKPNDATFV 257
CG + AR VF+ + R++V WN+++ Y L+G ++A L M +K + + TF
Sbjct: 190 CGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFS 249
Query: 258 CVLSAC 263
+LSAC
Sbjct: 250 SLLSAC 255
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 177/378 (46%), Gaps = 42/378 (11%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM- 80
+L + ++I + K G A K F+ +P++D +N + GY +GD A ++++ M
Sbjct: 435 ELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMK 494
Query: 81 -----PDR--------------DVVSWNCMIDGCVRVG-----NVPLAL-EFFNRMPA-- 113
PD D +C+ ++ G +V AL F + A
Sbjct: 495 LHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALA 554
Query: 114 ------------RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
++ VSWN M+ ++ E + F +M + + PN T V+++ A
Sbjct: 555 AAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM-KVEKFQPNAVTFVNIVRA 613
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
A L L VGM VHS + + L+ MY KCG ++ + F E+ + +VSW
Sbjct: 614 AAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSW 673
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
N+M+ Y HG A+ LFL M++ KP+ +F+ VLSAC HAG+V EG F+ M
Sbjct: 674 NTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGE 733
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELG 341
+ IE +VEHY C+VDLL +AGL + E+++ + VK H + L
Sbjct: 734 RHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSS-RMHCNLWLS 792
Query: 342 EIVAKRLIELEPMDIGPY 359
+L++LEP++ Y
Sbjct: 793 NAALCQLVKLEPLNPSHY 810
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 137/305 (44%), Gaps = 41/305 (13%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDV- 85
+ +ID + + AA +F+E+ +D +W M+A Y G E ELF+ M + DV
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVR 297
Query: 86 -----------------------------VSWNCMIDGCV---------RVGNVPLALEF 107
V + D V + G + +A +
Sbjct: 298 MNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQL 357
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F + R+VVSW++M+A + +A E + +F +MM PN TL SVL CA +
Sbjct: 358 FINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRI-HIKPNAVTLTSVLQGCAGVAA 416
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
+G +H + +I+ ++ +T +++MY KCG A F+ +P+++ V++N++ G
Sbjct: 417 SRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQG 476
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW-YFDLMRRVYNIE 286
Y G+ KA +++ M+ G P+ T V +L C G Y +++ ++ E
Sbjct: 477 YTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSE 536
Query: 287 PKVEH 291
V H
Sbjct: 537 CHVAH 541
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 70/137 (51%)
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F+ + VV WNSM+ + RA E L F M E P++ + L ACA
Sbjct: 56 FDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMD 115
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
G+ +H I ++ DV + T L+ MY K + AR VFD+M V++VV+WN+M+ G
Sbjct: 116 FKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSG 175
Query: 228 YGLHGNGEKALELFLEM 244
+G AL LF +M
Sbjct: 176 LAQNGCSSAALLLFHDM 192
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 14/250 (5%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR-----DVWN 56
YS+F R +R++FDS +V +NSMI G+ + G A F M D ++
Sbjct: 43 YSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYS 102
Query: 57 WNCMIAGYVAVGDLEAA---NELFERMP-DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ + D + ++L M + DV +++ + ++ A + F++M
Sbjct: 103 FTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMH 162
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
++VV+WN+M++ + L +F +M + + +L +++ A + L K V
Sbjct: 163 VKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDI-DHVSLYNLIPAVSKLEKSDVCR 221
Query: 173 WVHSF-IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
+H IK I S+ L+ MY C + A VF+E+ ++ SW +M+ Y +
Sbjct: 222 CLHGLVIKKGFI---FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHN 278
Query: 232 GNGEKALELF 241
G E+ LELF
Sbjct: 279 GFFEEVLELF 288
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM-EKKGPKP 251
L+ Y DL+R +FD + VV WNSMI GY G +AL F M E+KG P
Sbjct: 39 LINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDP 98
Query: 252 NDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
+ +F L AC + +G DL+ + +E V +V++ +A + ++ ++
Sbjct: 99 DKYSFTFALKACAGSMDFKKGLRIHDLIAEM-GLESDVYIGTALVEMYCKARDLVSARQV 157
Query: 312 IKYVSVK 318
+ VK
Sbjct: 158 FDKMHVK 164
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 194/398 (48%), Gaps = 10/398 (2%)
Query: 10 DARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGD 69
+A +F + ++ ++VS+ ++I G V +G L EM R+V ++G +
Sbjct: 379 EASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Query: 70 --------LEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
LE L R D ++V N ++D V A M R+ +++ S
Sbjct: 439 KLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTS 498
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
++ L + + M G + ++ +L ++A A+LG L G +H + +
Sbjct: 499 LVTRFNELGKHEMALSVINYMYGDGIRM-DQLSLPGFISASANLGALETGKHLHCYSVKS 557
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
+ L+ MY KCG+++ A+ VF+E+ +VVSWN ++ G +G AL F
Sbjct: 558 GFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAF 617
Query: 242 LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLAR 301
EM K +P+ TF+ +LSAC++ + G YF +M+++YNIEP+VEHY +V +L R
Sbjct: 618 EEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGR 677
Query: 302 AGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIM 361
AG ++ + +++ + +K C + LGE +A + + L P D YI+
Sbjct: 678 AGRLEEATGVVETMHLK-PNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYIL 736
Query: 362 LSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLE 399
L++ Y G+ + ++ R ++ EK L K+ S V ++
Sbjct: 737 LADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQ 774
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 45/284 (15%)
Query: 21 LDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM 80
LDL N+++ ++K ARKLFDEM R V+ W MI+ + + +A LFE M
Sbjct: 58 LDLC--NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEM 115
Query: 81 ------PD--------------RDVVSWNCMIDGCV--------------------RVGN 100
P+ RD+ S+ + G V + G
Sbjct: 116 MASGTHPNEFTFSSVVRSCAGLRDI-SYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQ 174
Query: 101 VPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLT 160
A E F+ + + +SW M++ V A+ + E L+ + EM+++G PNE T V +L
Sbjct: 175 FKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG-VPPNEFTFVKLLG 233
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
A + LG L G +HS I I ++V+L T L+ Y + M+ A V + ++V
Sbjct: 234 ASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFL 292
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
W S++ G+ + ++A+ FLEM G +PN+ T+ +LS C+
Sbjct: 293 WTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCS 336
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 1/165 (0%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
A + F+ M R V +W M++ +++ F L +F+EMM SG PNE T SV+ +CA
Sbjct: 77 ARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH-PNEFTFSSVVRSCA 135
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
L +S G VH + + + ++ + L +Y KCG A ++F + + +SW
Sbjct: 136 GLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTM 195
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGM 268
MI +AL+ + EM K G PN+ TFV +L A + G+
Sbjct: 196 MISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL 240
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 163/388 (42%), Gaps = 21/388 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WN 56
YS F ++ DA + +SS D+ + S++ G V+N A F EM + +
Sbjct: 268 FYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFT 327
Query: 57 WNCMIAGYVAVGDLEAANEL--------FERMPDRDVVSWNCMIDGCVRVGNVPL-ALEF 107
++ +++ AV L+ ++ FE D N ++D ++ + A
Sbjct: 328 YSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTD----VGNALVDMYMKCSASEVEASRV 383
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F M + NVVSW +++ V +C + EM++ E PN TL VL AC+ L
Sbjct: 384 FGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR-EVEPNVVTLSGVLRACSKLRH 442
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
+ + +H+++ ++ ++++ L+ Y +D A +V M R+ +++ S++
Sbjct: 443 VRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTR 502
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
+ G E AL + M G + + + +SA + G +E +
Sbjct: 503 FNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG-ALETGKHLHCYSVKSGFSG 561
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
+VD+ ++ G +++++++ + ++ + S L R
Sbjct: 562 AASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMR 621
Query: 348 LIELEPMDIGPYIMLSNTYAAQGRWDDV 375
+ E EP + I+LS + GR D+
Sbjct: 622 MKETEPDSVTFLILLSA--CSNGRLTDL 647
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%)
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
+G+ +H + + ++ L LL++Y+K + AR +FDEM R V +W MI +
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
AL LF EM G PN+ TF V+ +C
Sbjct: 101 KSQEFASALSLFEEMMASGTHPNEFTFSSVVRSC 134
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 204/430 (47%), Gaps = 13/430 (3%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y FG V A +F + + ++YN+++ G +NG A KLF +M R V + +
Sbjct: 361 YMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSL 420
Query: 62 AGYVAVGDLEAANELFERMPDRDV---VSWN-----CMIDGCVRVGNVPLALEFFNRMPA 113
V L + ++ E++ + ++N ++D C R + A E F++ P+
Sbjct: 421 TSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPS 480
Query: 114 R--NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
+ + S++ + R + + +F + + +E +L +L C LG +G
Sbjct: 481 NLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG 540
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
+H + D+ L L++MY KC D A +F+ M +V+SWNS+I Y L
Sbjct: 541 YQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQ 600
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSAC--THAGMVMEGWWYFDLMRRVYNIEPKV 289
NG++AL L+ M +K KP+ T V+SA T + + F M+ +Y+IEP
Sbjct: 601 RNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTT 660
Query: 290 EHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
EHY V +L GL++ +E+ I + V+ C H ++ + + VAK ++
Sbjct: 661 EHYTAFVRVLGHWGLLEEAEDTINSMPVQ-PEVSVLRALLDSCRIHSNTSVAKRVAKLIL 719
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKN 409
+P YI+ SN Y+A G W E +R +RE+G +K A S + E+ + ++
Sbjct: 720 STKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARD 779
Query: 410 YSVHRKRIMY 419
S +++ +Y
Sbjct: 780 TSHPQEKDIY 789
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 111/214 (51%), Gaps = 3/214 (1%)
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
A Y V +A + F ++ + N +I +++G A+ F + + VVS+ +
Sbjct: 91 AQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTA 150
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
+++ R E LK+F M ++G PNE T V++LTAC + + S+G+ +H I +
Sbjct: 151 LISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKS 210
Query: 182 NIKVDVLLSTCLLTMYVK--CGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
V +S L+++Y K + D +FDE+P R+V SWN+++ G KA +
Sbjct: 211 GFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFD 270
Query: 240 LFLEMEK-KGPKPNDATFVCVLSACTHAGMVMEG 272
LF EM + +G + T +LS+CT + +++ G
Sbjct: 271 LFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRG 304
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 43/274 (15%)
Query: 10 DARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP------------------- 50
D LFD D+ S+N+++ VK G++ A LF EM
Sbjct: 236 DVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSC 295
Query: 51 ---------------------VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWN 89
++++ N +I Y D++ L+E M +D V++
Sbjct: 296 TDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFT 355
Query: 90 CMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV 149
MI + G V A+E F + +N +++N+++A R + LK+F +M++ G +
Sbjct: 356 EMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVEL 415
Query: 150 PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV 209
+ +L S + AC + + V +H F + + T LL M +C M A ++
Sbjct: 416 -TDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEM 474
Query: 210 FDEMP--VRNVVSWNSMIMGYGLHGNGEKALELF 241
FD+ P + + + S+I GY +G +KA+ LF
Sbjct: 475 FDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLF 508
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 129/318 (40%), Gaps = 76/318 (23%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
N++I ++K G A +F + V ++ +I+G+ + A ++F RM +V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 87 SWN-----CMIDGCVRVGNVPLA------------------------------------- 104
N ++ CVRV L
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 105 LEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
L+ F+ +P R+V SWN++++ V+ + +F EM + TL ++L++C
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 165 LGKLSVGMWVHSF---------IKSNNIKV----------------------DVLLSTCL 193
L G +H + NN + D + T +
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPND 253
+T Y+ G +D A ++F + +N +++N+++ G+ +G+G KAL+LF +M ++G + D
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD 417
Query: 254 ATFVCVLSACTHAGMVME 271
+ + AC G+V E
Sbjct: 418 FSLTSAVDAC---GLVSE 432
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 202/444 (45%), Gaps = 47/444 (10%)
Query: 5 FGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGY 64
G++ AR++ SL DL N+++D + G+ A +F + ++ +WN +I+G
Sbjct: 318 LGKLIHARIIVSDSLA-DLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGC 376
Query: 65 VAVGDLEAANELFERM-----PDRDVVSWNCMIDGC------------------------ 95
G E A ++ R+ P D +++ I
Sbjct: 377 SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERS 436
Query: 96 VRVGNVPLALEFFNR-----------MPARNVVSWNSMLALHVRAKSFWECLKMFDEMME 144
V VG L++ F NR M R+VV W M+ H R + ++ F EM
Sbjct: 437 VFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYR 496
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC--LLTMYVKCGA 202
+ +L SV+ AC+ + L G H D ++S C L+ MY K G
Sbjct: 497 EKNR-SDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGF--DCVMSVCGALVDMYGKNGK 553
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
+ A +F ++ WNSM+ Y HG EKAL F ++ + G P+ T++ +L+A
Sbjct: 554 YETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAA 613
Query: 263 CTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXX 322
C+H G ++G + ++ M+ I+ +HY C+V+L+++AGLV + ELI+
Sbjct: 614 CSHRGSTLQGKFLWNQMKE-QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQA 672
Query: 323 XXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMI 382
C + ++G A+++++L+P D +I+LSN YA GRW+DV +R I
Sbjct: 673 ELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKI 732
Query: 383 REKGLQKEAASSVVHLEDFESKYF 406
R K+ S + + + ++ F
Sbjct: 733 RGLASSKDPGLSWIEVNNNNTQVF 756
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 150/324 (46%), Gaps = 9/324 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WN 56
MYS G + AR +FD D V++N+MI G +KN + F M + V +
Sbjct: 243 MYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFT 302
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVSW----NCMIDGCVRVGNVPLALEFFNRMP 112
++ ++ G +G + R+ D ++ N ++D G++ A F R+
Sbjct: 303 YSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIH 362
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
N+VSWNS+++ + + M+ ++ P+E T + ++A A + G
Sbjct: 363 NPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGK 422
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H + + V + T LL+MY K + A+ VFD M R+VV W MI+G+ G
Sbjct: 423 LLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLG 482
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
N E A++ F+EM ++ + + + V+ AC+ M+ +G + L R + +
Sbjct: 483 NSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRT-GFDCVMSVC 541
Query: 293 GCIVDLLARAGLVKNSEELIKYVS 316
G +VD+ + G + +E + S
Sbjct: 542 GALVDMYGKNGKYETAETIFSLAS 565
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 91/179 (50%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
N +I VR G++ A + F++MP RNVVS+N++ + + R F M
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 149 VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
PN +T S++ CA L + +G ++S I +V++ T +L MY CG ++ AR
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 209 VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
+FD + R+ V+WN+MI+G + E L F M G P T+ VL+ C+ G
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 29/194 (14%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLA----------LH---VRAKSFWEC 135
N +I VR ++ A + F++MP RN+V+ + A LH ++ SF
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 136 LKM-FDEMMESGEAVPNEATLVSVLTACAHLGKL----SVGMWVHSFIKSNNIKVDVLLS 190
M +E+ S + + ++VL + L G S +NN
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNN-------- 137
Query: 191 TCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN-GEKALELFLEMEKKGP 249
L++MYV+CG+++ AR VFD+MP RNVVS+N++ Y + + A L M +
Sbjct: 138 --LISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 250 KPNDATFVCVLSAC 263
KPN +TF ++ C
Sbjct: 196 KPNSSTFTSLVQVC 209
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 146/272 (53%), Gaps = 13/272 (4%)
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWE---CLKMFDEMMESGEAVPNEATLVSVLTACA 163
F R++V+WN + + A + ++ + +F ++ + + P+ T SVL ACA
Sbjct: 326 FMEMSHCRDIVAWNGI----ITAFAVYDPERAIHLFGQLRQE-KLSPDWYTFSSVLKACA 380
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
L + +H+ + D +L+ L+ Y KCG++DL VFD+M R+VVSWNS
Sbjct: 381 GLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNS 440
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVY 283
M+ Y LHG + L +F +M+ P+ ATF+ +LSAC+HAG V EG F M
Sbjct: 441 MLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKP 497
Query: 284 NIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEI 343
P++ HY C++D+L+RA +EE+IK + + C H ++ LG++
Sbjct: 498 ETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMD-PDAVVWIALLGSCRKHGNTRLGKL 556
Query: 344 VAKRLIEL-EPMDIGPYIMLSNTYAAQGRWDD 374
A +L EL EP + YI +SN Y A+G +++
Sbjct: 557 AADKLKELVEPTNSMSYIQMSNIYNAEGSFNE 588
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
++V+ N +I+ + GN+ A + F+ MP RNVVSW +++ +V+A + E +F M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC-- 200
+ PNE TL SVLT+C + G VH + + ++ +++MY +C
Sbjct: 154 L--SHCFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHD 207
Query: 201 -GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCV 259
A A VF+ + +N+V+WNSMI + G+KA+ +F+ M G + AT + +
Sbjct: 208 GAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI 267
Query: 260 LSA 262
S+
Sbjct: 268 CSS 270
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 149 VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNI--KVDVLLSTCLLTMYVKCGAMDLA 206
+ ++ ++ ACA L G+ +H + S+ +V+L+ L+ MY KCG + A
Sbjct: 56 LQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYA 115
Query: 207 RDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH 265
R VFD MP RNVVSW ++I GY GN ++ LF M PN+ T VL++C +
Sbjct: 116 RQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHC-FPNEFTLSSVLTSCRY 173
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 144/347 (41%), Gaps = 82/347 (23%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM----------- 49
MY+ G + AR +FD+ ++VS+ ++I G+V+ G LF M
Sbjct: 105 MYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTL 164
Query: 50 ----------PVRDV-------------WNWNCMIAGYVAVGDLEAANE---LFERMPDR 83
P + V + N +I+ Y D AA E +FE + +
Sbjct: 165 SSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFK 224
Query: 84 DVVSWNCMIDG--CVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
++V+WN MI C +G A+ F RM + V + L L +
Sbjct: 225 NLVTWNSMIAAFQCCNLGKK--AIGVFMRMHSDGVGFDRATL------------LNICSS 270
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSV--GMWVHSFIKSNNIKVDVLLSTCLLTMYVK 199
+ +S + VPNE V C L L+V G+ + + + IKV + +L Y
Sbjct: 271 LYKSSDLVPNE-----VSKCCLQLHSLTVKSGLVTQTEVATALIKV----YSEMLEDYTD 321
Query: 200 CGAMDLARDVFDEMP-VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
C +F EM R++V+WN +I + ++ + E+A+ LF ++ ++ P+ TF
Sbjct: 322 C------YKLFMEMSHCRDIVAWNGIITAFAVY-DPERAIHLFGQLRQEKLSPDWYTFSS 374
Query: 259 VLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
VL AC AG+V R +I +V G + D + L+
Sbjct: 375 VLKAC--AGLVTA--------RHALSIHAQVIKGGFLADTVLNNSLI 411
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D V NS+I + K G ++FD+M RDV +WN M+ Y G +++ +F++M
Sbjct: 403 DTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD 462
Query: 82 -DRDVVSWNCMIDGCVRVGNVPLALEFFNRM-------PARNVVSWNSMLALHVRAKSFW 133
+ D ++ ++ C G V L F M P N + ++ + RA+ F
Sbjct: 463 INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLN--HYACVIDMLSRAERFA 520
Query: 134 ECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
E +E+++ P+ +++L +C G +G
Sbjct: 521 EA----EEVIKQMPMDPDAVVWIALLGSCRKHGNTRLG 554
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 166/350 (47%), Gaps = 40/350 (11%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM---PVRDVWNW 57
Y+ G + D+RL FD ++V +N+++ G+ N + LF +M R
Sbjct: 360 FYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYT 418
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRD--------------------------------- 84
V +L+ + + RM D
Sbjct: 419 FSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTS 478
Query: 85 VVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMME 144
VV N + R G +++ + + + VSWN +A R+ E +++F M++
Sbjct: 479 VVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQ 538
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIK-VDVLLSTCLLTMYVKCGAM 203
S P++ T VS+L+ C+ L L++G +H I + D + L+ MY KCG++
Sbjct: 539 S-NIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSI 597
Query: 204 DLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
VF+E +N+++W ++I G+HG G++ALE F E G KP+ +F+ +L+AC
Sbjct: 598 RSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTAC 657
Query: 264 THAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
H GMV EG F M+ Y +EP+++HY C VDLLAR G +K +E LI+
Sbjct: 658 RHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIR 706
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 124/261 (47%), Gaps = 41/261 (15%)
Query: 42 ARKLFDEMPVRDVWNWN--------------CM---------------------IAGYVA 66
A ++F++MP + + WN CM + G
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSC 227
Query: 67 VGDLEAANELF----ERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
V DL+ + +L ++ D ++ N +I + GN +A F + ++VSWN++
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAI 287
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
+ ++++ + LK+F M E G + PN+ T VSVL + + LS G +H + N
Sbjct: 288 ICATAKSENPLKALKLFVSMPEHGFS-PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 346
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
+ ++L L+ Y KCG ++ +R FD + +N+V WN+++ GY + +G L LFL
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFL 405
Query: 243 EMEKKGPKPNDATFVCVLSAC 263
+M + G +P + TF L +C
Sbjct: 406 QMLQMGFRPTEYTFSTALKSC 426
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 147/330 (44%), Gaps = 40/330 (12%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------ 80
N++I + K GE A K+FD+MP R+ ++N +I GY GD++ A +F M
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 81 PDRDVVSW--------------------------------NCMIDGCVRVGNVPLALEFF 108
P++ VS C++ R+ + +A + F
Sbjct: 113 PNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVF 172
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
MP +++ +WN M++L EC+ F E++ G ++ E++ + VL + + L
Sbjct: 173 EDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASL-TESSFLGVLKGVSCVKDL 231
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
+ +H + ++ + L++ Y KCG +A +F + ++VSWN++I
Sbjct: 232 DISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICAT 291
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPK 288
N KAL+LF+ M + G PN T+V VL + ++ G ++ + E
Sbjct: 292 AKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK-NGCETG 350
Query: 289 VEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+ ++D A+ G +++S Y+ K
Sbjct: 351 IVLGNALIDFYAKCGNLEDSRLCFDYIRDK 380
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVH--SFIKSNNIKVDVLLSTCLLTMYVKC 200
+ G+ + +VS+L C + +H S + + V + ++++Y K
Sbjct: 3 LSCGDLANHNDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKL 62
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
G + LA VFD+MP RN VS+N++I GY +G+ +KA +F EM G PN +T +L
Sbjct: 63 GEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL 122
Query: 261 SACT---HAGMVMEG 272
S + AG + G
Sbjct: 123 SCASLDVRAGTQLHG 137
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 42/248 (16%)
Query: 8 VSDARLLFD-SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVA 66
++DA LL D +S +V N + + + G+ + KL + D +WN IA
Sbjct: 463 MNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSR 522
Query: 67 VGDLEAANELFERM------PDR----------------------------------DVV 86
E ELF+ M PD+ D
Sbjct: 523 SDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTF 582
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
N +ID + G++ ++ F +N+++W ++++ E L+ F E + G
Sbjct: 583 VCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLG 642
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
P+ + +S+LTAC H G + GM + +K ++ ++ C + + + G + A
Sbjct: 643 FK-PDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEA 701
Query: 207 RDVFDEMP 214
+ EMP
Sbjct: 702 EHLIREMP 709
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 197/432 (45%), Gaps = 43/432 (9%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELF---- 77
+LV +NS++D + + G A +F M RDV +WNC+I G+ E A + F
Sbjct: 168 NLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMR 227
Query: 78 --ERMPDRDVVSWNCMIDG--------------CVRVGNVP------LALEFF---NRMP 112
E PD VS I C+++G + ++ F NR+
Sbjct: 228 EMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLD 287
Query: 113 A-----RNVVSWNSMLALHVRAKSFWEC-----LKMFDEMMESGEAVPNEATLVSVLTAC 162
R + W+S+L + W C L++F M + P++ T SVL++
Sbjct: 288 DSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAM-TQSVRPDKFTFSSVLSSM 346
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
+ L G VHS + +D ++T L+ MY K G++DLA VF + ++++ WN
Sbjct: 347 NAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWN 405
Query: 223 SMIMGYGLHGNGEKALELFLEM-EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
++IMG + ++L +F ++ + KP+ T + +L AC +AG V EG F M +
Sbjct: 406 TVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEK 465
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELG 341
+ + P EHY CI++LL R G++ ++++ + + D+ L
Sbjct: 466 AHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLG-DTRLA 524
Query: 342 EIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDF 401
E VAK ++E EP PY++L Y RW++ ++R + E L+ SS + +E
Sbjct: 525 ETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESS 584
Query: 402 ESKYFVKNYSVH 413
+ +H
Sbjct: 585 VFSFEADQLQIH 596
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 132/307 (42%), Gaps = 54/307 (17%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y G V +A LFD + +++N + G KNG A LFDEMP RDV +WN M
Sbjct: 48 LYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTM 107
Query: 61 IAGYVAVGDLEAANELFERMPDRDV----------------------------------- 85
I+G V+ G E +F M ++
Sbjct: 108 ISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRY 167
Query: 86 --VSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLA-------LHVRAKSFWECL 136
V WN ++D R+G AL F M R+VVSWN ++ V FW
Sbjct: 168 NLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFW--- 224
Query: 137 KMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF-IKSNNIKVDVLLSTCLLT 195
+M E P+E T+ V++ C+ L +LS G + IK + ++L +
Sbjct: 225 -----LMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAG-ID 278
Query: 196 MYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDAT 255
M+ KC +D + +F E+ + V NSMI Y H GE AL LF+ + +P+ T
Sbjct: 279 MFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFT 338
Query: 256 FVCVLSA 262
F VLS+
Sbjct: 339 FSSVLSS 345
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 7/223 (3%)
Query: 44 KLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPL 103
+L + VR + N + Y G + A +LF+ +PD++ ++WN + G + G +
Sbjct: 29 QLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNN 88
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT--LVSVLTA 161
AL+ F+ MP R+VVSWN+M++ V +++F + M+ E P E T +++ L
Sbjct: 89 ALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFD-MQRWEIRPTEFTFSILASLVT 147
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
C G+ G + S + N+ V ++ MY + G D A VF M R+VVSW
Sbjct: 148 CVRHGEQIHGNAICSGVSRYNLVV----WNSVMDMYRRLGVFDYALSVFLTMEDRDVVSW 203
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
N +I+ GN E AL+ F M + +P++ T V+S C+
Sbjct: 204 NCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICS 246
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 108/222 (48%), Gaps = 8/222 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFD---EMPVR-DVWN 56
M+S R+ D+ LF D V NSMI + + A +LF VR D +
Sbjct: 279 MFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFT 338
Query: 57 WNCMIAGYVAVGDLEAAN--ELFERMP-DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
++ +++ AV A+ L ++ D D +++ + G+V LA+ F +
Sbjct: 339 FSSVLSSMNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDG 398
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
++++ WN+++ R E L +F++++ + P+ TL+ +L AC + G ++ G+
Sbjct: 399 KDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQ 458
Query: 174 VHSFI-KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
+ S + K++ + C++ + + G ++ A+D+ D++P
Sbjct: 459 IFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIP 500
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 151/325 (46%), Gaps = 40/325 (12%)
Query: 26 YNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDR-- 83
++ +ID + K G+ + R++F R+ +W +++GY A G + A M
Sbjct: 355 HSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGF 414
Query: 84 --DVVSWNCMIDGCVRV-------------------GNVPLA----------------LE 106
DVV+ ++ C + NV L +
Sbjct: 415 RPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIR 474
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F+R+ RNV +W +M+ +V +++F M+ S P+ T+ VLT C+ L
Sbjct: 475 LFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHR-PDSVTMGRVLTVCSDLK 533
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
L +G +H I + +S ++ MY KCG + A FD + V+ ++W ++I
Sbjct: 534 ALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIE 593
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
YG + A+ F +M +G PN TF VLS C+ AG V E + +F+LM R+YN++
Sbjct: 594 AYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQ 653
Query: 287 PKVEHYGCIVDLLARAGLVKNSEEL 311
P EHY +++LL R G V+ ++ L
Sbjct: 654 PSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 134/288 (46%), Gaps = 21/288 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGET---------GAARKLFDEMPV 51
MY+ G V DA+ +FD S + ++ S+N+++ G V +G+ R+L ++ V
Sbjct: 155 MYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNV 214
Query: 52 RDVWNWNCMIAGYVAVGD------LEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLAL 105
+ N AG A+ L N LF V ++D + G V LA
Sbjct: 215 YSLSNVFKSFAGASALRQGLKTHALAIKNGLFN-----SVFLKTSLVDMYFKCGKVGLAR 269
Query: 106 EFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL 165
F+ + R++V W +M+A K WE L +F M+ + PN L ++L +
Sbjct: 270 RVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDV 329
Query: 166 GKLSVGMWVHSFI-KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSM 224
L +G VH+ + KS N + + L+ +Y KCG M R VF RN +SW ++
Sbjct: 330 KALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTAL 389
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ GY +G ++AL + M+++G +P+ T VL C + +G
Sbjct: 390 MSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQG 437
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 114/279 (40%), Gaps = 42/279 (15%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
S++D + K G+ G AR++FDE+ RD+ W MIAG A LF M + +
Sbjct: 253 TSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKI 312
Query: 87 SWNC-----------------------------------------MIDGCVRVGNVPLAL 105
N +ID + G++
Sbjct: 313 YPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGR 372
Query: 106 EFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL 165
F RN +SW ++++ + F + L+ M + G P+ T+ +VL CA L
Sbjct: 373 RVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFR-PDVVTIATVLPVCAEL 431
Query: 166 GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI 225
+ G +H + N +V L T L+ MY KCG + +FD + RNV +W +MI
Sbjct: 432 RAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMI 491
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
Y + + +E+F M +P+ T VL+ C+
Sbjct: 492 DCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCS 530
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
+ + R + L + D + + G V N T ++L AC L G VH I+ N
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPV-NATTFSALLEACVRRKSLLHGKQVHVHIRING 141
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNG--EKALEL 240
++ + L T L+ MY CG++ A+ VFDE NV SWN+++ G + G + L
Sbjct: 142 LESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLST 201
Query: 241 FLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
F EM + G N + V + A + +G
Sbjct: 202 FTEMRELGVDLNVYSLSNVFKSFAGASALRQG 233
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 181/412 (43%), Gaps = 44/412 (10%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP----- 81
N ++D + G+ + + F+ +P +DV +WN +++ G + + +LF +M
Sbjct: 253 NVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKR 312
Query: 82 ---------------DRDVVS--------------------WNCMIDGCVRVGNVPLALE 106
+ D+ S + +ID + + +
Sbjct: 313 PSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSAL 372
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL- 165
+ +P N+ NS++ + + ++MF M++ G + +E TL +VL A +
Sbjct: 373 LYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGI-DEVTLSTVLKALSLSL 431
Query: 166 -GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSM 224
L VH + DV +S L+ Y K G +++R VFDE+ N+ S+
Sbjct: 432 PESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSI 491
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYN 284
I GY +G G +++ EM++ P++ T + VLS C+H+G+V EG FD + Y
Sbjct: 492 INGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYG 551
Query: 285 IEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIV 344
I P + Y C+VDLL RAGLV+ +E L+ C H + +G
Sbjct: 552 ISPGRKLYACMVDLLGRAGLVEKAERLLLQAR-GDADCVAWSSLLQSCRIHRNETIGRRA 610
Query: 345 AKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
A+ L+ LEP + YI +S Y G ++ ++R + + L +E S V
Sbjct: 611 AEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSV 662
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 108/214 (50%), Gaps = 2/214 (0%)
Query: 59 CMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVS 118
C + ++A ++ ++ E P V + N ID ++ GN+ A E F+ M R+VV+
Sbjct: 21 CSLTPFIATPRMDFSS-FLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVT 79
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
+N +++ + R ++++ EM+ G + +T SVL+ C+ G+ VH +
Sbjct: 80 YNLLISGNSRYGCSLRAIELYAEMVSCG-LRESASTFPSVLSVCSDELFCREGIQVHCRV 138
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
S ++ + + L+ +Y +D+A +FDEM RN+ N ++ + G ++
Sbjct: 139 ISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLF 198
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
E++L ME +G N T+ ++ C+H +V EG
Sbjct: 199 EVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG 232
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 46/294 (15%)
Query: 22 DLV-SYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM 80
DLV ++N ID +K+G +A + FDEM VRDV +N +I+G G A EL+ M
Sbjct: 44 DLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEM 103
Query: 81 PD-----------------------RDVVSWNCMID------------------GCVRVG 99
R+ + +C + C+R+
Sbjct: 104 VSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRL- 162
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
V +AL+ F+ M RN+ N +L + +++ M G A N T ++
Sbjct: 163 -VDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVA-KNGLTYCYMI 220
Query: 160 TACAHLGKLSVGMWVHSFIKSNNIKV-DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
C+H + G +HS + + + ++ ++ L+ Y CG + + F+ +P ++V
Sbjct: 221 RGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDV 280
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+SWNS++ +G+ +L+LF +M+ G +P+ F+ L+ C+ + G
Sbjct: 281 ISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSG 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 47/272 (17%)
Query: 5 FGRVSDARLLFDSSLTLDL-------VSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNW 57
F + +++ LF+ L ++L ++Y MI G + ++L + V+ WN
Sbjct: 188 FCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQL-HSLVVKSGWNI 246
Query: 58 ------NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
N ++ Y A GDL + F +P++DV+SWN ++ C G+V +L+ F++M
Sbjct: 247 SNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKM 306
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
FW G+ P+ +S L C+ + G
Sbjct: 307 -------------------QFW------------GKR-PSIRPFMSFLNFCSRNSDIQSG 334
Query: 172 MWVHSFIKSNNIKVDVL-LSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
+H ++ V L + + L+ MY KC ++ + ++ +P N+ NS++
Sbjct: 335 KQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMH 394
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
G + +E+F M +G ++ T VL A
Sbjct: 395 CGITKDIIEMFGLMIDEGTGIDEVTLSTVLKA 426
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 139/298 (46%), Gaps = 41/298 (13%)
Query: 5 FGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGY 64
FGR + L+ + D+ S++D + K GE RK+FD M R+ W +IA +
Sbjct: 302 FGRQVHS-LVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAH 360
Query: 65 VAVGDLEAANELFERMPDRDVVSWN----CMIDGCVRVGNVPLALEF------------- 107
G E A LF M R +++ N ++ C VG + L E
Sbjct: 361 AREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNV 420
Query: 108 -------------------FN---RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMES 145
FN ++P+R+VVSW +M++ E L EM++
Sbjct: 421 YIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQE 480
Query: 146 GEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDL 205
G PN T S L ACA+ L +G +HS K N+ +V + + L+ MY KCG +
Sbjct: 481 G-VEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSE 539
Query: 206 ARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
A VFD MP +N+VSW +MIMGY +G +AL+L ME +G + +D F +LS C
Sbjct: 540 AFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 40/285 (14%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
N++I V+ G+ ARK+FD MP ++ W MI GY+ G + A LFE +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 87 SWN-----CMIDGCVR------------------VGNVPL----------------ALEF 107
N C+++ C R VGN+ + AL
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRA 240
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F+ M ++V+SW ++++ R + + MF M+ +PNE T+ S+L AC+
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHW-FLPNEFTVCSILKACSEEKA 299
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L G VHS + IK DV + T L+ MY KCG + R VFD M RN V+W S+I
Sbjct: 300 LRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAA 359
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ G GE+A+ LF M+++ N+ T V +L AC G ++ G
Sbjct: 360 HAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLG 404
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 148/306 (48%), Gaps = 47/306 (15%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIA-------GYVAVG------ 68
+L+ +S++ + + GE +A + FD M +DV +W +I+ G A+G
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML 276
Query: 69 -------------DLEAANE-------------LFERMPDRDVVSWNCMIDGCVRVGNVP 102
L+A +E + +RM DV ++D + G +
Sbjct: 277 NHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
+ F+ M RN V+W S++A H R E + +F +M+ + N T+VS+L AC
Sbjct: 337 DCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLF-RIMKRRHLIANNLTVVSILRAC 395
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
+G L +G +H+ I N+I+ +V + + L+ +Y KCG A +V ++P R+VVSW
Sbjct: 396 GSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWT 455
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV 282
+MI G G+ +AL+ EM ++G +PN T+ L AC ++ ++ G R +
Sbjct: 456 AMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIG-------RSI 508
Query: 283 YNIEPK 288
++I K
Sbjct: 509 HSIAKK 514
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 97/186 (52%), Gaps = 7/186 (3%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D+ + N +I CVR+G++ A + F+ MP +N V+W +M+ +++ E +F++
Sbjct: 114 DQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFED 173
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDV---LLSTCLLTMYV 198
++ G NE V +L C+ + +G VH N +KV V ++ + L+ Y
Sbjct: 174 YVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVH----GNMVKVGVGNLIVESSLVYFYA 229
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
+CG + A FD M ++V+SW ++I G+G KA+ +F+ M PN+ T
Sbjct: 230 QCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCS 289
Query: 259 VLSACT 264
+L AC+
Sbjct: 290 ILKACS 295
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 140/288 (48%), Gaps = 16/288 (5%)
Query: 5 FGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW----NWNCM 60
FGR+ DAR L S D+VSYN+++ G++K G+ A LFD++ D+ +N +
Sbjct: 356 FGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 415
Query: 61 IAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV 116
I G G+LE A L E M + DV+++ ++ G V+ GN+ +A E ++ M + +
Sbjct: 416 IDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI 475
Query: 117 ----VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
++ + +R + ++ +EM+ + P+ + +G L +
Sbjct: 476 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGY 228
I + D + T ++ Y++ G +AR+++DEM + +V+++ +I G+
Sbjct: 536 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGH 595
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF 276
G E+A + EM+K+G +PN T +L AG + E + Y
Sbjct: 596 AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYL 643
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 112/233 (48%), Gaps = 13/233 (5%)
Query: 24 VSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WNWNCMIAGYVAVGDLEAANELFER 79
V+YN +I+G KNG+ AR+ +M +++N +I GY G + A + +
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 333
Query: 80 MPDRDVV----SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWEC 135
M + + ++N I G + A E + M A +VVS+N+++ +++ F E
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEA 393
Query: 136 LKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLT 195
+FD+ + +G+ P+ T +++ G L + + + I DV+ T L+
Sbjct: 394 SLLFDD-LRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVK 452
Query: 196 MYVKCGAMDLARDVFDEMPVRNV----VSWNSMIMGYGLHGNGEKALELFLEM 244
+VK G + +A +V+DEM + + ++ + +G G+ +KA L EM
Sbjct: 453 GFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEM 505
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 144/295 (48%), Gaps = 27/295 (9%)
Query: 2 YSVFGRVSDARLLFDSSLTL----DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----D 53
++ G+ D + F + + +YN MID K G+ AAR LF+EM R D
Sbjct: 237 FAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD 296
Query: 54 VWNWNCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFN 109
+N MI G+ VG L+ FE M D DV+++N +I+ + G +P+ LEF+
Sbjct: 297 TVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYR 356
Query: 110 RMPAR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL 165
M NVVS+++++ + + +K + +M G VPNE T S++ A +
Sbjct: 357 EMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG-LVPNEYTYTSLIDANCKI 415
Query: 166 GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP----VRNVVSW 221
G LS + + + ++ +V+ T L+ M A ++F +M + N+ S+
Sbjct: 416 GNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASY 475
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPN---DATFV---CVLSACTHAGMVM 270
N++I G+ N ++ALEL E++ +G KP+ TF+ C L A +VM
Sbjct: 476 NALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 137/341 (40%), Gaps = 63/341 (18%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWNWNCMIAGYVAVGDLEA 72
+ L ++VSY++++D K G A K + +M V + + + +I +G+L
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420
Query: 73 A----NELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLA 124
A NE+ + + +VV++ +IDG + A E F +M N+ S+N+++
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIH 480
Query: 125 LHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIK 184
V+AK+ L++ +E+ G P+ + + L K+ V + +K IK
Sbjct: 481 GFVKAKNMDRALELLNELKGRG-IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN----VVSWNSMIMG------------- 227
+ L+ T L+ Y K G + DEM + VV++ +I G
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY 599
Query: 228 -------YGLHGNG----------------EKALELFLEMEKKGPKPNDATFVCVLSACT 264
+GL N E A LF +M +KG P+ + ++
Sbjct: 600 FNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF 659
Query: 265 HAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
G V+E D M + G +DLLA LV
Sbjct: 660 KQGNVLEALALRDKMAEI----------GMKLDLLAYTSLV 690
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 122/268 (45%), Gaps = 14/268 (5%)
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVV----SWNCMIDGCVRVGNVPLALEFFNRM- 111
++ + + + +G LE A + F +M V S N ++ ++G FF M
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 112 --PAR-NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
AR V ++N M+ + +F+EM G VP+ T S++ +G+L
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG-LVPDTVTYNSMIDGFGKVGRL 313
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSM 224
+ +K + DV+ L+ + K G + + + + EM NVVS++++
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYN 284
+ + G ++A++ +++M + G PN+ T+ ++ A G + + + + M +V
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV-G 432
Query: 285 IEPKVEHYGCIVDLLARAGLVKNSEELI 312
+E V Y ++D L A +K +EEL
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELF 460
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 98/173 (56%), Gaps = 1/173 (0%)
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
E+++ G A+P+ V + +CA+L L VH + + D L+ +++M+ +C
Sbjct: 226 ELLDKG-AMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGEC 284
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
++ A+ VFD M +++ SW+ M+ Y +G G+ AL LF EM K G KPN+ TF+ V
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 261 SACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
AC G + E + +FD M+ + I PK EHY ++ +L + G + +E+ I+
Sbjct: 345 LACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIR 397
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 155/328 (47%), Gaps = 22/328 (6%)
Query: 5 FGRVSDA-RLLFD---SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+GR SDA RLL D + ++V++NS+ID K G+ A KLFDEM R ++
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRD----VVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+N +I G+ L+ A ++F M +D VV++N +I+G + V +E F M
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 113 AR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
R N V++ +++ +A +F +M+ G PN T ++L GKL
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG-VHPNIMTYNTLLDGLCKNGKL 466
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSM 224
M V +++ + ++ D+ + K G ++ D+F + ++ +V+++N+M
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYN 284
I G+ G E+A LF++M++ GP P+ T+ ++ A G MR
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC-R 585
Query: 285 IEPKVEHYGCIVDLLARAGLVKNSEELI 312
YG + D+L L K E++
Sbjct: 586 FAGDASTYGLVTDMLHDGRLDKGFLEVL 613
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 141/313 (45%), Gaps = 18/313 (5%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPV----RDVWNWNCMIAGYVAVGDLEAANELF 77
DLV+Y ++I+G K GE A L ++M DV ++ +I ++ A LF
Sbjct: 204 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263
Query: 78 ERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRA 129
M ++ DV +++ +I G A + M R NVV++NS++ +
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
E K+FDEM++ PN T S++ +L + + + S + DV+
Sbjct: 324 GKLIEAEKLFDEMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 190 STCLLTMYVKC----GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEME 245
L+ + K M+L RD+ V N V++ ++I G+ + + A +F +M
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
G PN T+ +L G + + F+ +++ +EP + Y + + + +AG V
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS-KMEPDIYTYNIMSEGMCKAGKV 501
Query: 306 KNSEELIKYVSVK 318
++ +L +S+K
Sbjct: 502 EDGWDLFCSLSLK 514
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 134/306 (43%), Gaps = 25/306 (8%)
Query: 24 VSYNSMIDGHVKNGETGAARKLFDEM----PVRDVWNWNCMIAGYVAVGDLEAANELFER 79
+S N+++ H+K E A LF EM P + ++ +++ + + E+
Sbjct: 36 LSRNALL--HLKLDE---AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEK 90
Query: 80 MP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP----ARNVVSWNSMLALHVRAKS 131
M ++ ++N MI+ R + AL +M ++V+ NS+L
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 150
Query: 132 FWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLST 191
E + + D+M+E G P+ T +++ K S + + + + D++
Sbjct: 151 ISEAVALVDQMVEMGYQ-PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209
Query: 192 CLLTMYVKCGAMDLARDVFDEMPV----RNVVSWNSMIMGYGLHGNGEKALELFLEMEKK 247
++ K G DLA ++ ++M +VV ++++I + + + AL LF EM+ K
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 248 GPKPNDATFVCVLSA-CTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVK 306
G +P+ T+ ++S C + D++ R I P V + ++D A+ G +
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER--KINPNVVTFNSLIDAFAKEGKLI 327
Query: 307 NSEELI 312
+E+L
Sbjct: 328 EAEKLF 333
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 140/278 (50%), Gaps = 21/278 (7%)
Query: 5 FGRVSDA-RLLFD---SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+GR SDA RLL D + ++V+++++ID VK G+ A KL+DEM R D++
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRD----VVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ +I G+ L+ A +FE M +D VV++N +I G + V +E F M
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 113 AR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
R N V++N+++ +A K+F +M+ G P+ T +L GKL
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG-VPPDIITYSILLDGLCKYGKL 481
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSM 224
+ V +++ + ++ D+ ++ K G ++ D+F + ++ NV+ + +M
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
I G+ G E+A LF EM++ G PN T+ ++ A
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 155/336 (46%), Gaps = 34/336 (10%)
Query: 7 RVSDARLLFDSSLTLD----LVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWN 58
R+S+A L D ++ V++N++I G + + A L D M R D++ +
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 59 CMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR 114
++ G GD++ A L ++M + DVV + +ID NV AL F M +
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 115 ----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
NVV++NS++ + + ++ +M+E + PN T +++ A GKL
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVE 343
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIM 226
++ + +I D+ + L+ + +D A+ +F+ M + NVV++N++I
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYN-- 284
G+ E+ +ELF EM ++G N T+ ++ AG D+ ++++
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC-------DMAQKIFKKM 456
Query: 285 ----IEPKVEHYGCIVDLLARAGLVKNSEELIKYVS 316
+ P + Y ++D L + G ++ + + +Y+
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 140/308 (45%), Gaps = 18/308 (5%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRD----VWNWNCMIAGYVAVGDLEAANELF 77
D+V+ +S+++G+ A L D+M V + +N +I G A L
Sbjct: 149 DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALI 208
Query: 78 ERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPA----RNVVSWNSMLALHVRA 129
+RM R D+ ++ +++G + G++ LAL +M +VV + +++
Sbjct: 209 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNY 268
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
K+ + L +F EM G PN T S++ + G+ S + S + I +V+
Sbjct: 269 KNVNDALNLFTEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEME 245
+ L+ +VK G + A ++DEM R ++ +++S+I G+ +H ++A +F M
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
K PN T+ ++ A V EG F M + + V Y ++ L +AG
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT-YNTLIQGLFQAGDC 446
Query: 306 KNSEELIK 313
++++ K
Sbjct: 447 DMAQKIFK 454
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 140/308 (45%), Gaps = 18/308 (5%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLEAANELF 77
D+V Y ++ID A LF EM + +V +N +I G A+ L
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 78 ERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRA 129
M +R +VV+++ +ID V+ G + A + ++ M R ++ +++S++
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
E MF E+M S + PN T +++ ++ GM + + + + +
Sbjct: 374 DRLDEAKHMF-ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEME 245
L+ + G D+A+ +F +M ++++++ ++ G +G EKAL +F ++
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
K +P+ T+ ++ AG V +GW F + + ++P V Y ++ R GL
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLK 551
Query: 306 KNSEELIK 313
+ ++ L +
Sbjct: 552 EEADALFR 559
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 124/287 (43%), Gaps = 20/287 (6%)
Query: 42 ARKLFDEM----PVRDVWNWNCMIAGYVAVGDLEAANELFERMPD----RDVVSWNCMID 93
A LF EM P+ + +N +++ + + L ERM + D+ S+N +I+
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 94 GCVRVGNVPLALEFFNRMPA----RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV 149
R +PLAL +M ++V+ +S+L + K E + + D+M E
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM-EYQ 182
Query: 150 PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV 209
PN T +++ K S + + + + + D+ ++ K G +DLA +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 210 FDEMPV----RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA-CT 264
+M +VV + ++I + N AL LF EM+ KG +PN T+ ++ C
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 265 HAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
+ D++ R I P V + ++D + G + +E+L
Sbjct: 303 YGRWSDASRLLSDMIER--KINPNVVTFSALIDAFVKEGKLVEAEKL 347
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 139/278 (50%), Gaps = 21/278 (7%)
Query: 5 FGRVSDARLLF----DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+GR SDA L + + +LV++N++ID VK G+ A KL+D+M R D++
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRD----VVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+N ++ G+ L+ A ++FE M +D VV++N +I G + V E F M
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 113 AR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
R + V++ +++ K+F +M+ G P+ T +L + GKL
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTYSILLDGLCNNGKL 486
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSM 224
+ V +++ + IK+D+ + T ++ K G +D D+F + ++ NVV++N+M
Sbjct: 487 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 546
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
I G ++A L +M++ GP PN T+ ++ A
Sbjct: 547 ISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 147/313 (46%), Gaps = 18/313 (5%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPV----RDVWNWNCMIAGYVAVGDLEAANELF 77
+LV+Y +++G K G+T A L ++M DV +N +I ++ A LF
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 78 ERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRA 129
+ M + +VV+++ +I G A + + M + N+V++N+++ V+
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
F E K++D+M++ P+ T S++ +L + F+ S + DV+
Sbjct: 344 GKFVEAEKLYDDMIKR-SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEME 245
L+ + K ++ ++F EM R + V++ ++I G G+ + A ++F +M
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
G P+ T+ +L + G + + FD M++ I+ + Y +++ + +AG V
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK-SEIKLDIYIYTTMIEGMCKAGKV 521
Query: 306 KNSEELIKYVSVK 318
+ +L +S+K
Sbjct: 522 DDGWDLFCSLSLK 534
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 141/308 (45%), Gaps = 18/308 (5%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLEAANELF 77
D+V +N++ID K A LF EM + +V ++ +I+ + G A++L
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 78 ERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRA 129
M ++ ++V++N +ID V+ G A + ++ M R ++ ++NS++
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
+ +MF E M S + P+ T +++ ++ G + + + D +
Sbjct: 379 DRLDKAKQMF-EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEME 245
T L+ G D A+ VF +M ++++++ ++ G +G EKALE+F M+
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
K K + + ++ AG V +GW F + + ++P V Y ++ L L+
Sbjct: 498 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 306 KNSEELIK 313
+ + L+K
Sbjct: 557 QEAYALLK 564
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 124/275 (45%), Gaps = 16/275 (5%)
Query: 50 PVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV----SWNCMIDGCVRVGNVPLAL 105
P+ + +N +++ + + L E+M ++V ++N +I+ R + LAL
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 106 EFFNRMPA----RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
+M ++V+ +S+L + K + + + D+M+E G P+ T +++
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR-PDTITFTTLIHG 199
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----N 217
K S + + + + +++ ++ K G DLA ++ ++M +
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA-CTHAGMVMEGWWYF 276
VV +N++I + + + AL LF EME KG +PN T+ ++S C++
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 277 DLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
D++ + I P + + ++D + G +E+L
Sbjct: 320 DMIEK--KINPNLVTFNALIDAFVKEGKFVEAEKL 352
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 144/278 (51%), Gaps = 21/278 (7%)
Query: 5 FGRVSDA-RLLFD---SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+GR SDA RLL D + ++V+++++ID VK G+ A KL+DEM R D++
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRD----VVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ +I G+ L+ A +FE M +D VV++N +I G + V +E F M
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 113 AR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
R N V++ +++ +A+ +F +M+ G +P+ T +L + GK+
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG-VLPDIMTYSILLDGLCNNGKV 482
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSM 224
+ V +++ + ++ D+ ++ K G ++ D+F + ++ NVV++ +M
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
+ G+ G E+A LF EM+++GP P+ T+ ++ A
Sbjct: 543 MSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 160/367 (43%), Gaps = 57/367 (15%)
Query: 7 RVSDARLLFDSSLTL----DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWN 58
R+SDA L + + D ++N++I G ++ A L D M V+ D+ +
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225
Query: 59 CMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR 114
++ G GD++ A L ++M + VV +N +ID NV AL F M +
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 115 ----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
NVV++NS++ + + ++ +M+E + PN T +++ A GKL
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVE 344
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIM 226
++ + +I D+ + L+ + +D A+ +F+ M + NVV++N++I
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA------CTHA-------------- 266
G+ ++ +ELF EM ++G N T+ ++ C +A
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 267 ---------------GMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
G V F+ ++R +EP + Y +++ + +AG V++ +L
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRS-KMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 312 IKYVSVK 318
+S+K
Sbjct: 524 FCSLSLK 530
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 125/276 (45%), Gaps = 17/276 (6%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWNWNCMIAGYVAVGDLEAANELF 77
D+V+ NS+++G A L +M D + +N +I G A L
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALV 209
Query: 78 ERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPA----RNVVSWNSMLALHVRA 129
+RM + D+V++ +++G + G++ LAL +M VV +N+++
Sbjct: 210 DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY 269
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
K+ + L +F EM G PN T S++ + G+ S + S + I +V+
Sbjct: 270 KNVNDALNLFTEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEME 245
+ L+ +VK G + A ++DEM R ++ +++S+I G+ +H ++A +F M
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
K PN T+ ++ A V EG F M +
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 143/278 (51%), Gaps = 21/278 (7%)
Query: 5 FGRVSDA-RLLFD---SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+GR SDA RLL D + ++V+++++ID VK G+ A KL+DEM R D++
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRD----VVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ +I G+ L+ A +FE M +D VV+++ +I G + V +E F M
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 113 AR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
R N V++ +++ +A+ +F +M+ G PN T +L GKL
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG-VHPNILTYNILLDGLCKNGKL 484
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSM 224
+ M V +++ + ++ D+ ++ K G ++ ++F + ++ NV+++N+M
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM 544
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
I G+ G+ E+A L +M++ GP PN T+ ++ A
Sbjct: 545 ISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 143/308 (46%), Gaps = 18/308 (5%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLEAANELF 77
D+V YN++IDG K A LF EM + DV+ ++ +I+ G A+ L
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 78 ERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRA 129
M +R +VV+++ +ID V+ G + A + ++ M R ++ +++S++
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
E MF E+M S + PN T +++ ++ GM + + + + +
Sbjct: 377 DRLDEAKHMF-ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPV----RNVVSWNSMIMGYGLHGNGEKALELFLEME 245
T L+ + + D A+ VF +M N++++N ++ G +G KA+ +F ++
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
+ +P+ T+ ++ AG V +GW F + + + P V Y ++ R G
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL-SLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 306 KNSEELIK 313
+ ++ L+K
Sbjct: 555 EEADSLLK 562
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 144/313 (46%), Gaps = 18/313 (5%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPV----RDVWNWNCMIAGYVAVGDLEAANELF 77
DLV+Y ++++G K G+ A L +M DV +N +I G ++ A LF
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 78 ERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRA 129
M ++ DV +++ +I G A + M R NVV++++++ V+
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
E K++DEM++ P+ T S++ +L + + S + +V+
Sbjct: 342 GKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEME 245
+ L+ + K ++ ++F EM R N V++ ++I G+ + + A +F +M
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
G PN T+ +L G + + F+ ++R +EP + Y +++ + +AG V
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS-TMEPDIYTYNIMIEGMCKAGKV 519
Query: 306 KNSEELIKYVSVK 318
++ EL +S+K
Sbjct: 520 EDGWELFCNLSLK 532
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 127/287 (44%), Gaps = 20/287 (6%)
Query: 42 ARKLFDEM----PVRDVWNWNCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMID 93
A LF +M P + +N +++ + E L E+M D+ +++ I+
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 94 GCVRVGNVPLALEFFNRMPA----RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV 149
R + LAL +M ++V+ +S+L + +K + + + D+M+E G
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK- 185
Query: 150 PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV 209
P+ T +++ K S + + + + D++ ++ K G +DLA +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 210 FDEMPV----RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA-CT 264
+M +VV +N++I G + + + AL LF EM+ KG +P+ T+ ++S C
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 265 HAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
+ D++ R I P V + ++D + G + +E+L
Sbjct: 306 YGRWSDASRLLSDMIER--KINPNVVTFSALIDAFVKEGKLVEAEKL 350
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 153/336 (45%), Gaps = 61/336 (18%)
Query: 1 MYSVFGRVS---DARLLFDS----SLTLDLVSYNSMIDGHVKNG-ETGAARKLFDEMPVR 52
+ S +GR +A +F+S L +LV+YN++ID K G E K FDEM
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN 333
Query: 53 DVW----NWNCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLA 104
V +N ++A G EAA LF+ M +R DV S+N ++D + G + LA
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 105 LEFFNRMPAR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLT 160
E +MP + NVVS+++++ +A F E L +F EM
Sbjct: 394 FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR----------------- 436
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV----R 216
+LG I +D + LL++Y K G + A D+ EM +
Sbjct: 437 ---YLG----------------IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF 276
+VV++N+++ GYG G ++ ++F EM+++ PN T+ ++ + G+ E F
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 277 DLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
+ + V Y ++D L + GLV ++ LI
Sbjct: 538 REFKSA-GLRADVVLYSALIDALCKNGLVGSAVSLI 572
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 21/239 (8%)
Query: 11 ARLLFDS----SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIA 62
AR LFD + D+ SYN+++D K G+ A ++ +MPV+ +V +++ +I
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 63 GYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA----R 114
G+ G + A LF M D VS+N ++ +VG AL+ M + +
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 115 NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV 174
+VV++N++L + + + E K+F EM +PN T +++ + G M +
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKRE-HVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 175 HSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYG 229
KS ++ DV+L + L+ K G + A + DEM NVV++NS+I +G
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFG 595
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 17/241 (7%)
Query: 58 NCMIAGYVAVGDLEAANELFERM----PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
+ MI+ G + A +FE V +++ +I R G A+ FN M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 114 ----RNVVSWNSML-ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
N+V++N+++ A F + K FDEM +G P+ T S+L C+ G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNG-VQPDRITFNSLLAVCSRGGLW 355
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSM 224
+ + + I+ DV LL K G MDLA ++ +MPV+ NVVS++++
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYN 284
I G+ G ++AL LF EM G + ++ +LS T G E D++R + +
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA---LDILREMAS 472
Query: 285 I 285
+
Sbjct: 473 V 473
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 21/278 (7%)
Query: 5 FGRVSDA-RLLFD---SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WN 56
+GR SDA RLL D + D+ +++++ID VK G+ A KL+DEM R +
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ +I G+ L+ A ++FE M + DVV++N +I G + V +E F M
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 113 AR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
R N V++N ++ +A ++F EM+ G PN T ++L GKL
Sbjct: 424 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKL 482
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSM 224
M V +++ + ++ + ++ K G ++ D+F + ++ +VV++N+M
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
I G+ G+ E+A LF EM++ G PN + ++ A
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 145/313 (46%), Gaps = 18/313 (5%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRD----VWNWNCMIAGYVAVGDLEAANELF 77
DLV+Y +++G K G+T A L ++M V +N +I G ++ A LF
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 78 ERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRA 129
+ M + +VV+++ +I G A + M R +V ++++++ V+
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
E K++DEM++ P+ T S++ +L + F+ S + DV+
Sbjct: 340 GKLVEAEKLYDEMVKR-SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEME 245
L+ + K ++ +VF EM R N V++N +I G G+ + A E+F EM
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
G PN T+ +L G + + F+ ++R +EP + Y +++ + +AG V
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKV 517
Query: 306 KNSEELIKYVSVK 318
++ +L +S+K
Sbjct: 518 EDGWDLFCNLSLK 530
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 129/287 (44%), Gaps = 20/287 (6%)
Query: 42 ARKLFDEM----PVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDV----VSWNCMID 93
A LF EM P + ++ +++ + + L E+M + + +++ +I+
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 94 GCVRVGNVPLALEFFNRMPA----RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV 149
R +PLAL +M N+V+ +S+L + +K E + + D+M +G
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ- 183
Query: 150 PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV 209
PN T +++ K S M + + + + D++ ++ K G DLA ++
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 210 FDEMPV----RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA-CT 264
++M V+ +N++I G + + + AL LF EME KG +PN T+ ++S C
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 265 HAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
+ D++ R I P V + ++D + G + +E+L
Sbjct: 304 YGRWSDASRLLSDMIER--KINPDVFTFSALIDAFVKEGKLVEAEKL 348
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 136/271 (50%), Gaps = 21/271 (7%)
Query: 5 FGRVSDA-RLLFD---SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+ R SDA RLL D + ++V++N++ID VK G+ A KL+DEM R D++
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRD----VVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ +I G+ L+ A +FE M +D VV++N +I+G + + +E F M
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 113 AR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
R N V++ +++ +A+ +F +M+ G PN T ++L GKL
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG-VHPNIMTYNTLLDGLCKNGKL 486
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSM 224
M V +++ + ++ + ++ K G ++ D+F + ++ +V+ +N+M
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDAT 255
I G+ G E+A LF +M + GP P+ T
Sbjct: 547 ISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 163/367 (44%), Gaps = 57/367 (15%)
Query: 7 RVSDARLLFDSSLTL----DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWN 58
R+SDA L D + + D +++ ++I G + + A L D M R ++ +
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 59 CMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR 114
++ G GD++ A L +M + +VV ++ +ID + + AL F M +
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 115 ----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
NV++++S+++ + + + ++ +M+E + PN T +++ A GKL
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPNVVTFNALIDAFVKEGKLVE 348
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIM 226
++ + +I D+ + L+ + +D A+ +F+ M + NVV++N++I
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA------CTHAGMVME--------- 271
G+ ++ +ELF EM ++G N T+ ++ C +A MV +
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468
Query: 272 --------------------GWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
F+ ++R +EP + Y +++ + +AG V++ +L
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 312 IKYVSVK 318
+S+K
Sbjct: 528 FCSLSLK 534
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 142/308 (46%), Gaps = 18/308 (5%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLEAANELF 77
++V Y+++ID K A LF EM + +V ++ +I+ A+ L
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 78 ERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRA 129
M +R +VV++N +ID V+ G + A + ++ M R ++ +++S++
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
E MF E+M S + PN T +++ ++ G+ + + + + +
Sbjct: 379 DRLDEAKHMF-ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEME 245
T L+ + + D A+ VF +M N++++N+++ G +G EKA+ +F ++
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 497
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
+ +P T+ ++ AG V +GW F + + ++P V Y ++ R GL
Sbjct: 498 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPDVIIYNTMISGFCRKGLK 556
Query: 306 KNSEELIK 313
+ ++ L +
Sbjct: 557 EEADALFR 564
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 136/278 (48%), Gaps = 21/278 (7%)
Query: 5 FGRVSDARLLF----DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+GR SDA L + + +LV++N++ID VK G+ A KL D+M R D++
Sbjct: 233 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT 292
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVV----SWNCMIDGCVRVGNVPLALEFFNRMP 112
+N +I G+ L+ A ++FE M +D ++N +I G + V E F M
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Query: 113 AR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
R + V++ +++ K+F +M+ G P+ T +L + GKL
Sbjct: 353 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTYSILLDGLCNNGKL 411
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSM 224
+ V +++ + IK+D+ + T ++ K G +D D+F + ++ NVV++N+M
Sbjct: 412 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 471
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
I G ++A L +M++ GP P+ T+ ++ A
Sbjct: 472 ISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 140/308 (45%), Gaps = 18/308 (5%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLEAANELF 77
D+V +N++ID K A LF EM + +V ++ +I+ + G A++L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 78 ERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRA 129
M ++ ++V++N +ID V+ G A + + M R ++ ++NS++
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
+ +MF E M S + P+ T +++ ++ G + + + D +
Sbjct: 304 DRLDKAKQMF-EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEME 245
T L+ G D A+ VF +M ++++++ ++ G +G EKALE+F M+
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
K K + + ++ AG V +GW F + + ++P V Y ++ L L+
Sbjct: 423 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 306 KNSEELIK 313
+ + L+K
Sbjct: 482 QEAYALLK 489
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 144/313 (46%), Gaps = 18/313 (5%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPV----RDVWNWNCMIAGYVAVGDLEAANELF 77
+LV+Y +++G K G+ A L ++M DV +N +I ++ A LF
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 78 ERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRA 129
+ M + +VV+++ +I G A + + M + N+V++N+++ V+
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
F E K+ D+M++ P+ T S++ +L + F+ S + D+
Sbjct: 269 GKFVEAEKLHDDMIKR-SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 327
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEME 245
L+ + K ++ ++F EM R + V++ ++I G G+ + A ++F +M
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
G P+ T+ +L + G + + FD M++ I+ + Y +++ + +AG V
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTTMIEGMCKAGKV 446
Query: 306 KNSEELIKYVSVK 318
+ +L +S+K
Sbjct: 447 DDGWDLFCSLSLK 459
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 125/275 (45%), Gaps = 16/275 (5%)
Query: 50 PVRDVWNWNCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLAL 105
P+ ++ +N +++ + + L E+M ++ ++N +I+ R + LAL
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 106 EFFNRMPA----RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
+M ++V+ +S+L + K + + + D+M+E G P+ T +++
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR-PDTITFTTLIHG 124
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----N 217
K S + + + + +++ ++ K G +DLA ++ ++M +
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA-CTHAGMVMEGWWYF 276
VV +N++I + + + AL LF EME KG +PN T+ ++S C++
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 277 DLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
D++ + I P + + ++D + G +E+L
Sbjct: 245 DMIEK--KINPNLVTFNALIDAFVKEGKFVEAEKL 277
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 131/284 (46%), Gaps = 17/284 (5%)
Query: 2 YSVFGRVSDA-RLLFD---SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----D 53
+ FGR SDA RLL D + D++++N++I VK G+ A KL DEM R D
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400
Query: 54 VWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
+N MI G+ + A +F+ M DVV++N +ID R V ++ +
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 114 R----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
R N ++N+++ + +F EM+ G P+ T +L KL
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG-VCPDTITCNILLYGFCENEKLE 519
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMI 225
+ + I+ + I +D + ++ K +D A D+F +P+ +V ++N MI
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
G+ A LF +M+ G +P+++T+ ++ C AG +
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 135/297 (45%), Gaps = 22/297 (7%)
Query: 16 DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLE 71
++ + D+V Y+++ID K+G A+ LF EM + +V+ +NCMI G+ + G
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 72 AANELFERMPDR----DVVSWNCMIDGCVRVGNV----PLALEFFNRMPARNVVSWNSML 123
A L M +R DV+++N +I V+ G + L E +R + V++NSM+
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNI 183
+ F + MFD M A P+ T +++ ++ GM + I +
Sbjct: 409 YGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 184 KVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV----VSWNSMIMGYGLHGNGEKALE 239
+ L+ + + ++ A+D+F EM V ++ N ++ G+ + E+ALE
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIV 296
LF ++ + + ++ V E W F + ++ +EP V+ Y ++
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL-PIHGVEPDVQTYNVMI 579
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 17/295 (5%)
Query: 2 YSVFGRVSDA-RLLFD---SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----D 53
+ FGR SDA RLL D + D++++N++I VK G+ A KL DEM R D
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400
Query: 54 VWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
+N MI G+ + A +F+ M DVV++N +ID R V ++ +
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 114 R----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
R N ++N+++ + +F EM+ G P+ T +L KL
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG-VCPDTITCNILLYGFCENEKLE 519
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMI 225
+ + I+ + I +D + ++ K +D A D+F +P+ +V ++N MI
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
G+ A LF +M+ G +P+++T+ ++ C AG + + MR
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 132/291 (45%), Gaps = 22/291 (7%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLEAANELF 77
D+V Y+++ID K+G A+ LF EM + +V+ +NCMI G+ + G A L
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 78 ERMPDR----DVVSWNCMIDGCVRVGNV----PLALEFFNRMPARNVVSWNSMLALHVRA 129
M +R DV+++N +I V+ G + L E +R + V++NSM+ +
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
F + MFD M A P+ T +++ ++ GM + I + +
Sbjct: 415 NRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVRNV----VSWNSMIMGYGLHGNGEKALELFLEME 245
L+ + + ++ A+D+F EM V ++ N ++ G+ + E+ALELF ++
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIV 296
+ + ++ V E W F + ++ +EP V+ Y ++
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL-PIHGVEPDVQTYNVMI 579
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 155/324 (47%), Gaps = 22/324 (6%)
Query: 1 MYSVFGRVSDA----RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR---- 52
+Y+ G++S A R++ + + +L +Y+ MI+G VK + A +F++M
Sbjct: 493 LYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKP 552
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEFF 108
DV +N +I+ + +G+++ A + + M ++ +I G + G++ +LE F
Sbjct: 553 DVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF 612
Query: 109 NRMP----ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
+ M V ++N ++ V + + +++ DEM +G + NE T ++ A
Sbjct: 613 DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA-NEHTYTKIMQGYAS 671
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS---- 220
+G + +++ + VD+ LL K G M A V EM RN+
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 731
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
+N +I G+ G+ +A +L +M+K+G KP+ T+ +SAC+ AG + + M
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 791
Query: 281 RVYNIEPKVEHYGCIVDLLARAGL 304
+ ++P ++ Y ++ ARA L
Sbjct: 792 AL-GVKPNIKTYTTLIKGWARASL 814
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 121/290 (41%), Gaps = 56/290 (19%)
Query: 25 SYNSMIDGHVKNGETGAARKLFDEMPVRDV----WNWNCMIAGYVAVGDLEAANELFERM 80
++N +I+G V+ + A ++ DEM + V + ++ GY +VGD A E F R+
Sbjct: 626 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 685
Query: 81 P----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVS----WNSMLALHVRAKSF 132
D D+ ++ ++ C + G + AL M ARN+ +N ++ R
Sbjct: 686 QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 745
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
WE + +M + G P+ T S ++AC+
Sbjct: 746 WEAADLIQQMKKEG-VKPDIHTYTSFISACS----------------------------- 775
Query: 193 LLTMYVKCGAMDLARDVFDEMPV----RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
K G M+ A +EM N+ ++ ++I G+ EKAL + EM+ G
Sbjct: 776 ------KAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMG 829
Query: 249 PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDL 298
KP+ A + C+L++ + E + Y +M I ++ G IVD+
Sbjct: 830 IKPDKAVYHCLLTSLLSRASIAEAYIYSGVM----TICKEMVEAGLIVDM 875
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 141/350 (40%), Gaps = 62/350 (17%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----------------- 50
+S R + + + + LV+Y+ ++ G K G AA FDE
Sbjct: 364 LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423
Query: 51 -------------VRDVWN---------WNCMIAGYVAVGDLEAANELFERMPD----RD 84
VR++ ++ M+ GY V D + +F+R+ +
Sbjct: 424 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT 483
Query: 85 VVSWNCMIDGCVRVGNVPLALEFFNRMP----ARNVVSWNSMLALHVRAKSFWECLKMFD 140
VV++ C+I+ +VG + ALE M N+ +++ M+ V+ K + +F+
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 543
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
+M++ G P+ ++++A +G + + ++ + ++ Y K
Sbjct: 544 DMVKEG-MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 201 GAMDLARDVFDEMP----VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATF 256
G M + +VFD M V V ++N +I G EKA+E+ EM G N+ T+
Sbjct: 603 GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTY 662
Query: 257 VCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVK 306
++ G + + YF ++++ G VD+ L+K
Sbjct: 663 TKIMQGYASVGDTGKAFEYFT----------RLQNEGLDVDIFTYEALLK 702
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 146/309 (47%), Gaps = 19/309 (6%)
Query: 22 DLVSYNSMIDGHVK---NGETGAARKLFDEMPVRDV----WNWNCMIAGYVAVGDLEAAN 74
++VSYN++IDG+ K NG+ A + EM DV +N +I G+ +L +
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 75 ELFERMPDRD----VVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALH 126
++F+ M D+D V+S+N +I+G G + A+ ++M + N++++N+++
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 127 VRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVD 186
+ E L MF + G AVP ++ A LGK+ G + ++ I D
Sbjct: 377 CKNDMLKEALDMFGSVKGQG-AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD 435
Query: 187 VLLSTCLLTMYVKCGAMDLARDVFDEMPVR---NVVSWNSMIMGYGLHGNGEKALELFLE 243
V CL+ + G ++ A+ +FD++ + ++V+++ ++ GY G KA L E
Sbjct: 436 VGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 244 MEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
M K G KP T+ V+ G + M + + V Y ++ ++ G
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Query: 304 LVKNSEELI 312
++++ L+
Sbjct: 556 KLEDANMLL 564
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 117/281 (41%), Gaps = 21/281 (7%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW----NWNCMIAGYVAVGD 69
+ D + +++SYNS+I+G G+ A + D+M V +N +I G+
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Query: 70 LEAANELFERMPDRDVVS----WNCMIDGCVRVGNVPLALEFFNRMPARNVV----SWNS 121
L+ A ++F + + V +N +ID ++G + M +V ++N
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
++A R + K+FD++ G +P+ T ++ G+ + +
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKG--LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKM 499
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-----NVVSWNSMIMGYGLHGNGEK 236
+K L ++ Y K G + A ++ +M NV S+N ++ GY G E
Sbjct: 500 GLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLED 559
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMV--MEGWWY 275
A L EM +KG PN T+ V G V +EG +
Sbjct: 560 ANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLF 600
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 150/327 (45%), Gaps = 22/327 (6%)
Query: 7 RVSDARLLFDSSLTL----DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWN 58
RV DA +FD + + ++V YN++IDG K+ + A L + M DV +N
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 59 CMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR 114
+I+G + G A + M R DV ++N +ID CV+ G V A EF+ M R
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 115 ----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
++V+++ ++ E +MF M+ G P+ T ++ K+
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG-CFPDVVTYSILINGYCKSKKVEH 344
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV----RNVVSWNSMIM 226
GM + + + + + T L+ Y + G +++A ++F M N++++N ++
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
G +G EKAL + +M+K G + T+ ++ AG V + W + + +
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL-NCQGLM 463
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIK 313
P + Y ++ L + GL + ++ L +
Sbjct: 464 PDIWTYTTMMLGLYKKGLRREADALFR 490
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 17/251 (6%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLEAANELF 77
D V Y ++IDG K G+ AA K F EM R DV + +I+G+ +GD+ A +LF
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 78 ERM----PDRDVVSWNCMIDGCVRVGNVPLALEFFNRM----PARNVVSWNSMLALHVRA 129
M + D V++ +I+G + G++ A N M + NVV++ +++ +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
++ EM + G PN T S++ G + + + ++ + D +
Sbjct: 470 GDLDSANELLHEMWKIG-LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEME 245
T L+ Y K G MD A+++ EM + +V++N ++ G+ LHG E +L M
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 246 KKGPKPNDATF 256
KG PN TF
Sbjct: 589 AKGIAPNATTF 599
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 125/284 (44%), Gaps = 17/284 (5%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGD 69
+F L D V++ +I+G+ K G A ++ + M +V + +I G GD
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 70 LEAANELFERM----PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNS 121
L++ANEL M ++ ++N +++G + GN+ A++ A + V++ +
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
++ + ++ + ++ EM+ G P T ++ G L G + +++ +
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV----VSWNSMIMGYGLHGNGEKA 237
I + L+ Y + A ++ +M R V ++ +++ G+ N ++A
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
LF EM+ KG + +T+ ++ +E FD MRR
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 135/324 (41%), Gaps = 49/324 (15%)
Query: 6 GRVSDAR----LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WNW 57
GR+ +A L+ T D++SY+++++G+ + GE KL + M + + + +
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 58 NCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
+I + L A E F M + D V + +IDG + G++ A +FF M +
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 114 RN----VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
R+ V+++ ++++ + E K+F EM G P+ T ++ G +
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE-PDSVTFTELINGYCKAGHMK 438
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
VH+ + ++ G NVV++ ++I G
Sbjct: 439 DAFRVHNHM-------------------IQAGCSP------------NVVTYTTLIDGLC 467
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKV 289
G+ + A EL EM K G +PN T+ +++ +G + E +
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADT 526
Query: 290 EHYGCIVDLLARAGLVKNSEELIK 313
Y ++D ++G + ++E++K
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILK 550
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 17/251 (6%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLEAANELF 77
D V Y ++IDG K G+ AA K F EM R DV + +I+G+ +GD+ A +LF
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 78 ERM----PDRDVVSWNCMIDGCVRVGNVPLALEFFNRM----PARNVVSWNSMLALHVRA 129
M + D V++ +I+G + G++ A N M + NVV++ +++ +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
++ EM + G PN T S++ G + + + ++ + D +
Sbjct: 470 GDLDSANELLHEMWKIG-LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEME 245
T L+ Y K G MD A+++ EM + +V++N ++ G+ LHG E +L M
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 246 KKGPKPNDATF 256
KG PN TF
Sbjct: 589 AKGIAPNATTF 599
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 125/284 (44%), Gaps = 17/284 (5%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGD 69
+F L D V++ +I+G+ K G A ++ + M +V + +I G GD
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 70 LEAANELFERM----PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNS 121
L++ANEL M ++ ++N +++G + GN+ A++ A + V++ +
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
++ + ++ + ++ EM+ G P T ++ G L G + +++ +
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV----VSWNSMIMGYGLHGNGEKA 237
I + L+ Y + A ++ +M R V ++ +++ G+ N ++A
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
LF EM+ KG + +T+ ++ +E FD MRR
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 135/324 (41%), Gaps = 49/324 (15%)
Query: 6 GRVSDAR----LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WNW 57
GR+ +A L+ T D++SY+++++G+ + GE KL + M + + + +
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 58 NCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
+I + L A E F M + D V + +IDG + G++ A +FF M +
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 114 RN----VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
R+ V+++ ++++ + E K+F EM G P+ T ++ G +
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE-PDSVTFTELINGYCKAGHMK 438
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
VH+ + ++ G NVV++ ++I G
Sbjct: 439 DAFRVHNHM-------------------IQAGCSP------------NVVTYTTLIDGLC 467
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKV 289
G+ + A EL EM K G +PN T+ +++ +G + E +
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADT 526
Query: 290 EHYGCIVDLLARAGLVKNSEELIK 313
Y ++D ++G + ++E++K
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILK 550
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 146/342 (42%), Gaps = 44/342 (12%)
Query: 11 ARLLFDS----SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWNWNCMIA 62
A LLF+ L D+ +Y M+D K G ARK F+EM +V + +I
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561
Query: 63 GYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR---- 114
Y+ + ANELFE M ++V+++ +IDG + G V A + F RM
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Query: 115 ----------------NVVSWNSMLALHVRAKSFWECLKMFDEM-MESGEAVPNEATLVS 157
NVV++ ++L ++ E K+ D M ME E PN+ +
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE--PNQIVYDA 679
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM---- 213
++ +GKL V + + + + + L+ Y K DLA V +M
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739
Query: 214 PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGW 273
NVV + MI G G ++A +L ME+KG +PN T+ ++ GM+ +
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG---FGMIGKIE 796
Query: 274 WYFDLMRRV--YNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
+L+ R+ + P Y ++D + G + + L++
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 146/339 (43%), Gaps = 38/339 (11%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWN----WNCMIAGYVAVGDLEA 72
+S ++V+Y++++ G + + G +++ + M + + +N ++ Y GD
Sbjct: 331 TSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSY 390
Query: 73 ANELFERMPD----RDVVSWNCMIDG------CVRVGNVPLALEFFNRMPARNVV----S 118
A +L ++M V +N +I + + LA + ++ M A VV +
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
+S A + + + EM+ G +P+ +T VL + K+ + + +
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQG-FIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP----VRNVVSWNSMIMGYGLHGNG 234
K + DV T ++ + K G ++ AR F+EM NVV++ ++I Y
Sbjct: 510 KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569
Query: 235 EKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM---RRVYNIE----- 286
A ELF M +G PN T+ ++ AG V + F+ M + V +++
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 629
Query: 287 -------PKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
P V YG ++D ++ V+ + +L+ +S++
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 16/225 (7%)
Query: 16 DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLE 71
D+S ++V+Y +++DG K+ ARKL D M + + ++ +I G VG L+
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 72 AANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRM----PARNVVSWNSML 123
A E+ M + + +++ +ID +V LA + ++M A NVV + M+
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 751
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNI 183
+ E K+ +MME PN T +++ +GK+ + + + S +
Sbjct: 752 DGLCKVGKTDEAYKLM-QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV 810
Query: 184 KVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
+ + L+ K GA+D+A ++ +EM W + GY
Sbjct: 811 APNYVTYRVLIDHCCKNGALDVAHNLLEEM---KQTHWPTHTAGY 852
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 138/314 (43%), Gaps = 18/314 (5%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRD----VWNWNCMIAGYVAVGD 69
+ D+ L L + YNS+I+GH K G+ AA EM + V + ++ GY + G
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 70 LEAANELFERMPDRDVV----SWNCMIDGCVRVGNVPLALEFFNRMPARNV----VSWNS 121
+ A L+ M + + ++ ++ G R G + A++ FN M NV V++N
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
M+ + + + EM E G VP+ + ++ G+ S +
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKG-IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG 606
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV----VSWNSMIMGYGLHGNGEKA 237
N +++ + T LL + + G ++ A V EM R V V + +I G H + +
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLF 666
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVD 297
L EM +G KP+D + ++ A + G E + +DLM + P Y +++
Sbjct: 667 FGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV-PNEVTYTAVIN 725
Query: 298 LLARAGLVKNSEEL 311
L +AG V +E L
Sbjct: 726 GLCKAGFVNEAEVL 739
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 138/316 (43%), Gaps = 22/316 (6%)
Query: 21 LDLVSYNSMIDGHVKNGET----GAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
+++V YN +IDG K + G + L + DV + ++ G V + E E+
Sbjct: 260 VNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEM 319
Query: 77 FERM------PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP----ARNVVSWNSMLALH 126
+ M P VS +++G + G + AL R+ + N+ +N+++
Sbjct: 320 MDEMLCLRFSPSEAAVS--SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL 377
Query: 127 VRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVD 186
+ + F E +FD M + G PN+ T ++ GKL + + +K+
Sbjct: 378 CKGRKFHEAELLFDRMGKIG-LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436
Query: 187 VLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFL 242
V L+ + K G + A EM + VV++ S++ GY G KAL L+
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 243 EMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARA 302
EM KG P+ TF +LS AG++ + F+ M +N++P Y +++
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEE 555
Query: 303 GLVKNSEELIKYVSVK 318
G + + E +K ++ K
Sbjct: 556 GDMSKAFEFLKEMTEK 571
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 119/294 (40%), Gaps = 29/294 (9%)
Query: 2 YSVFGRVSDARLLF----DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWN- 56
Y G+++ A L+ + + ++ +++ G + G A KLF+EM WN
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE---WNV 538
Query: 57 ------WNCMIAGYVAVGDLEAANELFERMPDRDVV----SWNCMIDGCVRVGNVPLALE 106
+N MI GY GD+ A E + M ++ +V S+ +I G G A
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 107 FFNRMPARNV----VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
F + + N + + +L R E L + EM++ G + V + +
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 163 AHLG-KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFD----EMPVRN 217
H KL G+ + +K D ++ T ++ K G A ++D E V N
Sbjct: 659 KHKDRKLFFGLLKE--MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
V++ ++I G G +A L +M+ PN T+ C L T + M+
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQ 770
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 39/270 (14%)
Query: 5 FGRVSDA-RLLFD---SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+GR SDA RLL D ++ DLV +N++ID VK G+ A KL+DEM V + +C
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM----VKSKHCF 353
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NV 116
DVV++N +I G + V +E F M R N
Sbjct: 354 ----------------------PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
V++ +++ +A+ +F +M+ G P+ T +L + G + + V
Sbjct: 392 VTYTTLIHGFFQARDCDNAQMVFKQMVSDG-VHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHG 232
+++ ++K+D++ T ++ K G ++ D+F + ++ NVV++ +M+ G+ G
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSA 262
E+A LF+EM++ GP PN T+ ++ A
Sbjct: 511 LKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 143/307 (46%), Gaps = 17/307 (5%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPV----RDVWNWNCMIAGYVAVGDLEAANELF 77
DLV+Y ++I+G K GE A L ++M DV +N +I G ++ A +LF
Sbjct: 214 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF 273
Query: 78 ERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV----VSWNSMLALHVRA 129
+M + DV ++N +I G A + M +N+ V +N+++ V+
Sbjct: 274 NKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKE 333
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
E K++DEM++S P+ +++ ++ GM V + + + +
Sbjct: 334 GKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 393
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEME 245
T L+ + + D A+ VF +M +++++N ++ G +GN E AL +F M+
Sbjct: 394 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ 453
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
K+ K + T+ ++ A AG V +GW F + + ++P V Y ++ R GL
Sbjct: 454 KRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMSGFCRKGLK 512
Query: 306 KNSEELI 312
+ ++ L
Sbjct: 513 EEADALF 519
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 126/284 (44%), Gaps = 20/284 (7%)
Query: 45 LFDEM----PVRDVWNWNCMIAGYVAVGDLEAANELFERMPD----RDVVSWNCMIDGCV 96
LF +M P + ++ +++ + + L E+M + ++ +++ I+
Sbjct: 62 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFC 121
Query: 97 RVGNVPLALEFFNRMP----ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNE 152
R + LAL +M ++V+ NS+L E + + D+M+E G P+
Sbjct: 122 RRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ-PDT 180
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
T +++ K S + + + + D++ ++ K G DLA ++ ++
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 240
Query: 213 MPV----RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA-CTHAG 267
M +VV +N++I G + + + A +LF +ME KG KP+ T+ ++S C +
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR 300
Query: 268 MVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
D++ + NI P + + ++D + G + +E+L
Sbjct: 301 WSDASRLLSDMLEK--NINPDLVFFNALIDAFVKEGKLVEAEKL 342
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 158/335 (47%), Gaps = 25/335 (7%)
Query: 6 GRVSDARLLFDSSLT------LDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVW 55
GRV DA L F ++ D ++N++++G K G A ++ D M DV+
Sbjct: 273 GRVEDA-LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331
Query: 56 NWNCMIAGYVAVGDLEAANELFERMPDRD----VVSWNCMIDGCVRVGNVPLALEFFNRM 111
+N +I+G +G+++ A E+ ++M RD V++N +I + V A E +
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 112 PAR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
++ +V ++NS++ ++ +++F+EM G P+E T ++ + GK
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG-CEPDEFTYNMLIDSLCSKGK 450
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV----RNVVSWNS 223
L + + ++ + V+ L+ + K A ++FDEM V RN V++N+
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVY 283
+I G E A +L +M +G KP+ T+ +L+ G + + M
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS-N 569
Query: 284 NIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
EP + YG ++ L +AG V+ + +L++ + +K
Sbjct: 570 GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 125/260 (48%), Gaps = 17/260 (6%)
Query: 11 ARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVA 66
AR+L + D+ ++NS+I G A +LF+EM + D + +N +I +
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 67 VGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP----ARNVVS 118
G L+ A + ++M R V+++N +IDG + A E F+ M +RN V+
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
+N+++ +++ + ++ D+M+ G+ P++ T S+LT G + + +
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQK-PDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVV----SWNSMIMGYGLHGNG 234
SN + D++ L++ K G +++A + + ++ + ++N +I G
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626
Query: 235 EKALELFLEMEKKGPKPNDA 254
+A+ LF EM ++ P DA
Sbjct: 627 TEAINLFREMLEQNEAPPDA 646
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 143/314 (45%), Gaps = 21/314 (6%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWNWNCMIAGYVAVGDLEAANELF 77
D+ ++N +I + + A + ++MP V D + ++ GY+ GDL+ A +
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 78 ERMPDRDV----VSWNCMIDGCVRVGNVPLALEFFNRMPARN-----VVSWNSMLALHVR 128
E+M + VS N ++ G + G V AL F M ++ ++N+++ +
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 129 AKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI-----KSNNI 183
A +++ D M++ G P+ T SV++ LG++ + V + N +
Sbjct: 308 AGHVKHAIEIMDVMLQEGYD-PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 184 KVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLE 243
+ L+ST V+ A +LAR + + + +V ++NS+I G L N A+ELF E
Sbjct: 367 TYNTLISTLCKENQVE-EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 244 MEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
M KG +P++ T+ ++ + G + E M + V Y ++D +A
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM-ELSGCARSVITYNTLIDGFCKAN 484
Query: 304 LVKNSEELIKYVSV 317
+ +EE+ + V
Sbjct: 485 KTREAEEIFDEMEV 498
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 142/277 (51%), Gaps = 22/277 (7%)
Query: 5 FGRVSDA-RLL---FDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+GR SDA RLL + + ++V++N++ID K G+ A KL +EM R D
Sbjct: 306 YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT 365
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRD----VVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+N +I G+ L+ A ++F+ M +D + ++N +I+G + V +E F M
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMS 425
Query: 113 AR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLT--ACAHLG 166
R N V++ +++ +A +F +M+ + VP + S+L C++ G
Sbjct: 426 QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN--RVPTDIMTYSILLHGLCSY-G 482
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMI 225
KL + + +++ + +++++ + ++ K G + A D+F + ++ +VV++N+MI
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMI 542
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
G ++A +LF +M++ G PN T+ ++ A
Sbjct: 543 SGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 142/310 (45%), Gaps = 22/310 (7%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEM------PVRDVWNWNCMIAGYVAVGDLEAANE 75
D+V+ +S+++G+ + A L D+M P D + + +I G A
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP--DTFTFTTLIHGLFLHNKASEAVA 209
Query: 76 LFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHV 127
L ++M R D+V++ +++G + G++ LAL N+M A NVV +N+++
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 128 RAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDV 187
+ + + +F EM E+ PN T S++ + G+ S + S + I +V
Sbjct: 270 KYRHVEVAVDLFTEM-ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 188 LLSTCLLTMYVKCGAMDLARDVFDEMPVRNV----VSWNSMIMGYGLHGNGEKALELFLE 243
+ L+ + K G + A + +EM R++ +++N +I G+ +H ++A ++F
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 244 MEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
M K PN T+ +++ V +G F M + + V Y I+ +AG
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT-YTTIIQGFFQAG 447
Query: 304 LVKNSEELIK 313
+++ + K
Sbjct: 448 DCDSAQMVFK 457
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 131/292 (44%), Gaps = 30/292 (10%)
Query: 42 ARKLFDEM----PVRDVWNWNCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMID 93
A LF +M P + +N +++ + E L E+M D+ +++ I+
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 94 GCVRVGNVPLALEFFNRMPA----RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV 149
R + LAL +M ++V+ +S+L + +K + + + D+M+E G
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK- 185
Query: 150 PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV 209
P+ T +++ K S + + + + D++ ++ K G +DLA ++
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 210 FDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA-CT 264
++M NVV +N++I + + E A++LF EME KG +PN T+ +++ C
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN 305
Query: 265 HAGMVMEGWWYFDLMRRVYN-----IEPKVEHYGCIVDLLARAGLVKNSEEL 311
+ G W D R + N I P V + ++D + G + +E+L
Sbjct: 306 Y------GRWS-DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 34/169 (20%)
Query: 5 FGRVSDARLLFD----SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR-DVWNWNC 59
+G++ A ++F S + L++ YN+MI+G K G+ G A LF + ++ DV +N
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNT 540
Query: 60 MIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
MI+G + L+ A++LF +M + G +P N ++
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKED---------------GTLP------------NSGTY 573
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
N+++ ++R ++ EM SG +A+ +S++T H G+L
Sbjct: 574 NTLIRANLRDCDRAASAELIKEMRSSG--FVGDASTISLVTNMLHDGRL 620
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 134/271 (49%), Gaps = 20/271 (7%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWNWNCMIAGYVAVGDLEAAN 74
+T ++ + N ++ K + +A K+ DE+P V ++ + ++ GYVA GD+E+A
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 75 ELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALH 126
+ E M DR D ++ ++DG ++G A + M N V++ M+
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 127 VRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL--SVGMWVHSFIKSNNIK 184
+ K E MFDEM+E +P+ + V+ A K+ + G+W +K+N +
Sbjct: 307 CKEKKSGEARNMFDEMLERS-FMPDSSLCCKVIDALCEDHKVDEACGLW-RKMLKNNCMP 364
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEM---PVRNVVSWNSMIMGYGLHGNGEKALELF 241
+ LLST L+ K G + AR +FDE + +++++N++I G G +A L+
Sbjct: 365 DNALLST-LIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLW 423
Query: 242 LEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+M ++ KPN T+ ++ + G V EG
Sbjct: 424 DDMYERKCKPNAFTYNVLIEGLSKNGNVKEG 454
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 140/298 (46%), Gaps = 25/298 (8%)
Query: 12 RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAV 67
R + + ++ LD V Y+ +IDG K+G A LF+EM ++ D+ +N +I G+
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 68 GDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNV----PLALEFFNRMPARNVVSW 119
G + +L M R +VV+++ +ID V+ G + L E R A N +++
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
NS++ + E ++M D M+ G P+ T ++ ++ G+ + +
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKG-CDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGE 235
+ + + L+ + + G +++A+ +F EM R ++VS+ ++ G +G E
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF--------DLMRRVYNI 285
KALE+F ++EK + + ++ ++ +A V + W F L R YNI
Sbjct: 491 KALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 133/326 (40%), Gaps = 58/326 (17%)
Query: 7 RVSDARLLFDSSLTL----DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIA 62
RVS+A L D + + L++ N++++G NG+ A L D M V + N +
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM-VETGFQPNEVTY 231
Query: 63 GYV-----AVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
G V G A EL +M +R D V ++ +IDG + G++ A FN M
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 291
Query: 114 R---------------------------------------NVVSWNSMLALHVRAKSFWE 134
+ NVV+++ ++ V+ E
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 135 CLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLL 194
++ EMM+ G A PN T S++ +L + + + S D++ L+
Sbjct: 352 ADQLLKEMMQRGIA-PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 195 TMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPK 250
Y K +D ++F EM +R N V++N+++ G+ G E A +LF EM + +
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 251 PNDATFVCVLSACTHAGMVMEGWWYF 276
P+ ++ +L G + + F
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEIF 496
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 108/223 (48%), Gaps = 12/223 (5%)
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRM----PARNVVSWNSMLALHVRAKSFWECLKMF 139
D V +N +++G V ALE +RM +++ N+++ + + +
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 140 DEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVK 199
D M+E+G PNE T VL G+ ++ M + ++ NIK+D + + ++ K
Sbjct: 217 DRMVETGFQ-PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 200 CGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDAT 255
G++D A ++F+EM ++ +++++N++I G+ G + +L +M K+ PN T
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 256 FVCVLSACTHAGMVMEGWWYF-DLMRRVYNIEPKVEHYGCIVD 297
F ++ + G + E ++M+R I P Y ++D
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQR--GIAPNTITYNSLID 376
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 151/318 (47%), Gaps = 18/318 (5%)
Query: 12 RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAV 67
R + + ++ LD V Y+ +IDG K+G A LF+EM ++ ++ +N +I G+
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 68 GDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV----VSW 119
G + +L M R +VV+++ +ID V+ G + A E M R + +++
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
S++ + + +M D M+ G PN T ++ ++ G+ + +
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKG-CDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGE 235
+ D + L+ + + G +++A+++F EM R N+V++ ++ G +G E
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 490
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
KALE+F ++EK + + + ++ +A V + W F + + ++P V+ Y +
Sbjct: 491 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPGVKTYNIM 549
Query: 296 VDLLARAGLVKNSEELIK 313
+ L + G + +E L +
Sbjct: 550 IGGLCKKGPLSEAELLFR 567
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 149/332 (44%), Gaps = 26/332 (7%)
Query: 6 GRVSDARLLFDSSLTL----DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
GRVS+A L D + + DL++ N++++G +G+ A L D+M V N +
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM-VEYGCQPNAVT 230
Query: 62 AGYV-----AVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
G V G A EL +M +R D V ++ +IDG + G++ A FN M
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 113 AR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
+ N++++N ++ A + + K+ +M++ + PN T ++ + GKL
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKL 349
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSM 224
+H + I D + T L+ + K +D A + D M + N+ ++N +
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA-CTHAGMVMEGWWYFDLMRRVY 283
I GY + LELF +M +G + T+ ++ C + + + +++ R
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR-- 467
Query: 284 NIEPKVEHYGCIVDLLARAGLVKNSEELIKYV 315
+ P + Y ++D L G + + E+ + +
Sbjct: 468 KVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 116/238 (48%), Gaps = 12/238 (5%)
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRM----PARNVVSWNSMLALHVRAKSFWECLKMF 139
+ ++++ +I+G G V ALE +RM ++++ N+++ + E + +
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 140 DEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVK 199
D+M+E G PN T VL G+ ++ M + ++ NIK+D + + ++ K
Sbjct: 217 DKMVEYG-CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 200 CGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDAT 255
G++D A ++F+EM ++ N++++N +I G+ G + +L +M K+ PN T
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 256 FVCVLSACTHAGMVMEG-WWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
F ++ + G + E + +++ R I P Y ++D + + + +++
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHR--GIAPDTITYTSLIDGFCKENHLDKANQMV 391
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 147/347 (42%), Gaps = 55/347 (15%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRD----VWNWNCMIAGYVAVGDLEAAN 74
L DLV Y S+I G GE + LFDE+ R +N +I G+ +G L+ A+
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302
Query: 75 ELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALH 126
E+FE M +R +V ++ +IDG VG AL+ N M + N V++N ++
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Query: 127 VRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL------------------ 168
+ + +++ E+M+ P+ T +L G L
Sbjct: 363 CKDGLVADAVEIV-ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Query: 169 ----SVGMWVHSFIKSNNIKV---------------DVLLSTCLLTMYVKCG----AMDL 205
S +H K N + D + + LL +K G AM+L
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 206 ARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH 265
+ + D VRN ++ +MI G+ G A L +M +P+ + C+LS+
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 266 AGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
G + + W F+ M+R N P V + ++D +AG +K++E L+
Sbjct: 542 EGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSAESLL 587
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 133/318 (41%), Gaps = 53/318 (16%)
Query: 12 RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAV 67
R + ++ ++ VS + +++ +V+ +TG A + M R +V+N N ++ G
Sbjct: 96 RKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRN 155
Query: 68 GDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSW 119
+ A L M DV S+N +I G + ALE N M ++V+W
Sbjct: 156 LECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTW 215
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
++ +A E + EM G
Sbjct: 216 GILIDAFCKAGKMDEAMGFLKEMKFMG--------------------------------- 242
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN----VVSWNSMIMGYGLHGNGE 235
++ D+++ T L+ + CG +D + +FDE+ R +++N++I G+ G +
Sbjct: 243 ---LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK 299
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
+A E+F M ++G +PN T+ ++ G E +LM + EP Y I
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE-KDEEPNAVTYNII 358
Query: 296 VDLLARAGLVKNSEELIK 313
++ L + GLV ++ E+++
Sbjct: 359 INKLCKDGLVADAVEIVE 376
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 136/314 (43%), Gaps = 34/314 (10%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWNWNCMIAGYVAVG 68
L+ ++ ++N ++ G +N E G A L EM + DV+++N +I G+
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 69 DLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMP----ARNVVSWN 120
+LE A EL M +V+W +ID + G + A+ F M ++V +
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251
Query: 121 SMLALHVRAKSFWECLK------MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV 174
S++ + F +C + +FDE++E G++ P T +++ LG+L +
Sbjct: 252 SLI------RGFCDCGELDRGKALFDEVLERGDS-PCAITYNTLIRGFCKLGQLKEASEI 304
Query: 175 HSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF------DEMPVRNVVSWNSMIMGY 228
F+ ++ +V T L+ G A + DE P N V++N +I
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP--NAVTYNIIINKL 362
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYN-IEP 287
G A+E+ M+K+ +P++ T+ +L G + E LM + + +P
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422
Query: 288 KVEHYGCIVDLLAR 301
V Y ++ L +
Sbjct: 423 DVISYNALIHGLCK 436
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 148/335 (44%), Gaps = 28/335 (8%)
Query: 2 YSVFGRVSDAR----LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----D 53
+ + R+ DA L+ S ++V YN++IDG KNGE A +L +EM + D
Sbjct: 151 FCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD 210
Query: 54 VWNWNCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFN 109
V +N ++ G G A + M R DVV++ +ID V+ GN+ A E +
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 110 RMPARNV----VSWNSM---LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
M +V V++NS+ L +H R ++ K FD M G PN T ++++
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGR---LYDAKKTFDLMASKG-CFPNVVTYNTLISGF 326
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NV 218
+ GM + + D+ L+ Y + G + +A D+F M R ++
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI 386
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDL 278
++ ++ G ++G E AL F +M + + ++ A V + W F
Sbjct: 387 ITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCR 446
Query: 279 MRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
+ V ++P Y ++ L + G + ++ELI+
Sbjct: 447 L-PVEGVKPDARTYTIMILGLCKNGPRREADELIR 480
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
+ C L VH FI S+ D+ ++ MY CG+++ A VF+ MP RN
Sbjct: 187 IAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERN 246
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
+ +W +I + +G GE A++ F +++G KP+ F + AC G + EG +F+
Sbjct: 247 LETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFE 306
Query: 278 LMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYV 315
M + Y I P +EHY +V +LA G + +E +++V
Sbjct: 307 SMYKEYGIIPCMEHYVSLVKMLAEPGYL---DEALRFV 341
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 143/325 (44%), Gaps = 27/325 (8%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR-DVWNWNCMIAGYVAVGDLE 71
+L S D+++YN MI G+ K GE A + D M V DV +N ++ G L+
Sbjct: 162 ILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLK 221
Query: 72 AANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSML 123
A E+ +RM R DV+++ +I+ R V A++ + M R +VV++N ++
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG------KLSVGMWVHSF 177
+ E +K ++M SG PN T +L + G KL M F
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSG-CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGN 233
S V+ L+ + G + A D+ ++MP N +S+N ++ G+
Sbjct: 341 SPS------VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYG 293
++A+E M +G P+ T+ +L+A G V + + + P + Y
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS-KGCSPVLITYN 453
Query: 294 CIVDLLARAGLVKNSEELIKYVSVK 318
++D LA+AG + +L+ + K
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAK 478
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 149/346 (43%), Gaps = 52/346 (15%)
Query: 2 YSVFGRVSDARLLFDS-SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW----N 56
Y G +++A + D S++ D+V+YN+++ +G+ A ++ D M RD +
Sbjct: 182 YCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVIT 241
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ +I + A +L + M DR DVV++N +++G + G + A++F N MP
Sbjct: 242 YTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMP 301
Query: 113 AR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESG--EAVPNEATLVSVLTACAHLG 166
+ NV++ N +L + + K+ +M+ G +V L++ L LG
Sbjct: 302 SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG 361
Query: 167 K-----------------LSVGMWVHSFIK---------------SNNIKVDVLLSTCLL 194
+ LS +H F K S D++ +L
Sbjct: 362 RAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTML 421
Query: 195 TMYVKCGAMDLARDVFDEMPVRN----VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPK 250
T K G ++ A ++ +++ + ++++N++I G G KA++L EM K K
Sbjct: 422 TALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK 481
Query: 251 PNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIV 296
P+ T+ ++ + G V E +F R+ I P + I+
Sbjct: 482 PDTITYSSLVGGLSREGKVDEAIKFFHEFERM-GIRPNAVTFNSIM 526
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 133/313 (42%), Gaps = 52/313 (16%)
Query: 16 DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----------------------- 52
D T D+V+YN +++G K G A K ++MP
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 53 ----------------DVWNWNCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMI 92
V +N +I G L A ++ E+MP + +S+N ++
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 93 DGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
G + + A+E+ RM +R ++V++N+ML + + +++ +++ G
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG-C 445
Query: 149 VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
P T +V+ A GK + + +++ ++K D + + L+ + G +D A
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 209 VFDE---MPVR-NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
F E M +R N V++NS+++G ++A++ + M +G KPN+ ++ ++
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565
Query: 265 HAGMVMEGWWYFD 277
+ GM E +
Sbjct: 566 YEGMAKEALELLN 578
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 126/269 (46%), Gaps = 33/269 (12%)
Query: 6 GRVSDA-RLLFD---SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNW 57
GR DA +LL D + +V++N +I+ + G G A + ++MP + ++
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 58 NCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
N ++ G+ ++ A E ERM R D+V++N M+ + G V A+E N++ +
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 114 RN----VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
+ ++++N+++ +A + +K+ DEM + + P+ T S++ + GK+
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 170 VGM-WVHSF----IKSNNIKVD-VLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVV 219
+ + H F I+ N + + ++L C K D A D M R N
Sbjct: 502 EAIKFFHEFERMGIRPNAVTFNSIMLGLC------KSRQTDRAIDFLVFMINRGCKPNET 555
Query: 220 SWNSMIMGYGLHGNGEKALELFLEMEKKG 248
S+ +I G G ++ALEL E+ KG
Sbjct: 556 SYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 6/201 (2%)
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
V N+ L VR E K + M+ G VP+ +++ LGK +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGN-VPDIIPCTTLIRGFCRLGKTRKAAKILE 161
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGE 235
++ + DV+ +++ Y K G ++ A V D M V +VV++N+++ G +
Sbjct: 162 ILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLK 221
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
+A+E+ M ++ P+ T+ ++ A V D MR P V Y +
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD-RGCTPDVVTYNVL 280
Query: 296 VDLLARAGLVKNSEELIKYVS 316
V+ + + G + +E IK+++
Sbjct: 281 VNGICKEGRL---DEAIKFLN 298
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 163/376 (43%), Gaps = 30/376 (7%)
Query: 2 YSVFGRVSDA----RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----D 53
Y G+V +A R + D + D +Y +++G KN + A ++F EM + D
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 54 VWNWNCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFN 109
V+++ +I G+ +G+++ A+ +F+ M + +V+ +N ++ G R G + A E +
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 110 RMPAR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL 165
M + N V++ +++ + ++ E ++FDEM G VP+ +++ C L
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG-LVPDSFVYTTLVDGCCRL 745
Query: 166 GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV--------FDEMPVRN 217
+ + + K + L+ K G +L +V FD N
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNA-LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
V++N MI GN E A ELF +M+ P T+ +L+ G E + FD
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 278 LMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMD 337
IEP Y I++ + G+ + L+ + K C +
Sbjct: 865 -EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLS 923
Query: 338 --SELGEI-VAKRLIE 350
+++GE+ VA++++E
Sbjct: 924 GFAKVGEMEVAEKVME 939
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 120/296 (40%), Gaps = 18/296 (6%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLEAAN--- 74
++V Y ++I ++N G A ++ EM + D++ +N +I G ++ A
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 75 -ELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA----RNVVSWNSMLALHVRA 129
E+ E + ++ I G + A ++ M N V ++ + +
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
E + M++ G + + T ++ K+ + ++ I DV
Sbjct: 571 GKVIEACSAYRSMVDQG-ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 190 STCLLTMYVKCGAMDLARDVFDEMP----VRNVVSWNSMIMGYGLHGNGEKALELFLEME 245
L+ + K G M A +FDEM NV+ +N ++ G+ G EKA EL EM
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLAR 301
KG PN T+ ++ +G + E + FD M ++ + P Y +VD R
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM-KLKGLVPDSFVYTTLVDGCCR 744
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 131/327 (40%), Gaps = 22/327 (6%)
Query: 7 RVSDARLLF---DS-SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WNWN 58
R+ DA+ L DS ++LD +Y+ +IDG +K AA+ L EM + + ++
Sbjct: 292 RLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYD 351
Query: 59 CMIAGYVAVGDLEAANELFERMPDRDVV----SWNCMIDGCVRVGNVPLALEFFNRMPAR 114
C I G +E A LF+ M ++ ++ +I+G R NV E M R
Sbjct: 352 CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411
Query: 115 NVV----SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
N+V ++ +++ + + EM+ SG PN +++ +
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG-CRPNVVIYTTLIKTFLQNSRFGD 470
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIM 226
M V +K I D+ L+ K MD AR EM N ++ + I
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
GY A + EM + G PN +++ G V+E + M I
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD-QGIL 589
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIK 313
+ Y +++ L + V ++EE+ +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFR 616
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 147/318 (46%), Gaps = 18/318 (5%)
Query: 12 RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAV 67
R + + + LD V Y+ +IDG K+G A LF+EM ++ D+ + +I G+
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 68 GDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV----VSW 119
G + +L M R DVV+++ +ID V+ G + A E M R + V++
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
S++ + + M D M+ G PN T ++ + G+ + +
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKG-CGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGE 235
+ D + L+ + + G +++A+++F EM R ++VS+ ++ G +G E
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
KALE+F ++EK + + + ++ +A V + W F + + ++P V+ Y +
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPDVKTYNIM 533
Query: 296 VDLLARAGLVKNSEELIK 313
+ L + G + ++ L +
Sbjct: 534 IGGLCKKGSLSEADLLFR 551
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 134/282 (47%), Gaps = 23/282 (8%)
Query: 6 GRVSD-ARLLFD---SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNW 57
GR D A+LL D +T D+V+++++ID VK G+ A +L EM R D +
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 58 NCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
+I G+ L+ AN + + M + ++ ++N +I+G + + LE F +M
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 114 RNVV----SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
R VV ++N+++ ++F EM+ S P+ + +L G+
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV-SRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMI 225
+ + I+ + +++D+ + ++ +D A D+F +P++ +V ++N MI
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
G G+ +A LF +ME+ G PN T+ ++ A H G
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA--HLG 574
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 144/333 (43%), Gaps = 28/333 (8%)
Query: 6 GRVSDARLLFDSSLTL----DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
GRVS+A L D + + L++ N++++G NG+ A L D M V + N +
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM-VETGFQPNEVT 214
Query: 62 AGYV-----AVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
G V G A EL +M +R D V ++ +IDG + G++ A FN M
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 113 AR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
+ +++ + +++ A + + K+ +M++ + P+ +++ GKL
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKL 333
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSM 224
+H + I D + T L+ + K +D A + D M + N+ ++N +
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM--RRV 282
I GY + LELF +M +G + T+ ++ G + F M RRV
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 283 YNIEPKVEHYGCIVDLLARAGLVKNSEELIKYV 315
P + Y ++D L G + + E+ + +
Sbjct: 454 ---RPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRM----PARNVVSWNSMLALHVRAKSFWECLKMF 139
D V+++ +I+G G V ALE +RM +++ N+++ + + +
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 140 DEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVK 199
D M+E+G PNE T VL G+ ++ M + ++ IK+D + + ++ K
Sbjct: 201 DRMVETGFQ-PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 200 CGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDAT 255
G++D A ++F+EM ++ +++ + ++I G+ G + +L +M K+ P+
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 256 FVCVLSACTHAGMVMEG-WWYFDLMRRVYNIEPKVEHYGCIVD 297
F ++ G + E + ++++R I P Y ++D
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQR--GISPDTVTYTSLID 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 117/276 (42%), Gaps = 21/276 (7%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEM------PVRDVWNWNCMIAGYVAVGDLEAANE 75
D V+++++I+G G A +L D M P + N ++ G G + A
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT--LITLNALVNGLCLNGKVSDAVL 198
Query: 76 LFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV----VSWNSMLALHV 127
L +RM + + V++ ++ + G LA+E +M R + V ++ ++
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 128 RAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDV 187
+ S +F+EM G + +++ + G+ G + + I DV
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKA-DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317
Query: 188 LLSTCLLTMYVKCGAMDLARDVFDEMPVRNV----VSWNSMIMGYGLHGNGEKALELFLE 243
+ + L+ +VK G + A ++ EM R + V++ S+I G+ +KA +
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 244 MEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM 279
M KG PN TF +++ A ++ +G F M
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 153/323 (47%), Gaps = 22/323 (6%)
Query: 6 GRVSDARLLFD----SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNW 57
G+VS+A +L D + D+V+YNS+++G ++G+T A L +M R DV+ +
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 58 NCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGN----VPLALEFFN 109
+ +I G ++AA LF+ M + VV++N ++ G + G L + +
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
R NV+++N +L + V+ E +++ EM+ G + PN T +++ +LS
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS-PNIITYNTLMDGYCMQNRLS 350
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMI 225
+ + N D++ T L+ Y +D VF + R N V+++ ++
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNI 285
G+ G + A ELF EM G P+ T+ +L G + + F+ +++ +
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK-SKM 469
Query: 286 EPKVEHYGCIVDLLARAGLVKNS 308
+ + Y I++ + + G V+++
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDA 492
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 146/327 (44%), Gaps = 31/327 (9%)
Query: 16 DSSLTLDLV-------------SYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWN 58
D+SL LDL+ +Y+++ID ++G AA LF EM + V +N
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 59 CMIAGYVAVGDLEAANELFERMPDRDVV----SWNCMIDGCVRVGNVPLALEFFNRMPAR 114
++ G G L + M R++V ++N ++D V+ G + A E + M R
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 115 ----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
N++++N+++ + E M D +M + P+ T S++ + ++
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLD-LMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP----VRNVVSWNSMIM 226
GM V I + + + + L+ + + G + LA ++F EM + +V+++ ++
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
G +G EKALE+F +++K + ++ G V + W F + ++
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL-PCKGVK 505
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIK 313
P V Y ++ L + G + + L++
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLR 532
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 132/277 (47%), Gaps = 21/277 (7%)
Query: 6 GRVSDARLLFDSSLTLDLV----SYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNW 57
G+ +D LL ++ ++V ++N ++D VK G+ A +L+ EM R ++ +
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336
Query: 58 NCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
N ++ GY L AN + + M D+V++ +I G V V ++ F +
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 396
Query: 114 R----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
R N V+++ ++ ++ ++F EM+ G +P+ T +L GKL
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG-VLPDVMTYGILLDGLCDNGKLE 455
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMI 225
+ + ++ + + + +++ T ++ K G ++ A ++F +P + NV+++ MI
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
G G+ +A L +ME+ G PND T+ ++ A
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 126/274 (45%), Gaps = 16/274 (5%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFF 108
D +N +I G G + A L +RM + DVV++N +++G R G+ LAL+
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 109 NRMPARN----VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
+M RN V ++++++ R + +F E ME+ + T S++
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE-METKGIKSSVVTYNSLVRGLCK 275
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVS 220
GK + G + + S I +V+ LL ++VK G + A +++ EM R N+++
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF-DLM 279
+N+++ GY + +A + M + P+ TF ++ V +G F ++
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 280 RRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
+R + Y +V ++G +K +EEL +
Sbjct: 396 KR--GLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 139/343 (40%), Gaps = 21/343 (6%)
Query: 74 NELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP----ARNVVSWNSMLALHVRA 129
E+ P +V ++ R L L+F ++ A N+ + N M+ R
Sbjct: 77 QEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRC 136
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
+ ++M+ G P+ T +++ GK+S + + + N + DV+
Sbjct: 137 CKTCFAYSVLGKVMKLGYE-PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVT 195
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVRN----VVSWNSMIMGYGLHGNGEKALELFLEME 245
++ + G LA D+ +M RN V +++++I G + A+ LF EME
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYF-DLMRRVYNIEPKVEHYGCIVDLLARAGL 304
KG K + T+ ++ AG +G D++ R I P V + ++D+ + G
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR--EIVPNVITFNVLLDVFVKEGK 313
Query: 305 VKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL------EPMDIGP 358
++ + EL K + + M + L E A +++L P DI
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE--ANNMLDLMVRNKCSP-DIVT 370
Query: 359 YIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDF 401
+ L Y R DD +V I ++GL A + + ++ F
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 19/260 (7%)
Query: 25 SYNSMIDGHVKNGETGAA----RKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM 80
+YN++I+ +G A +K+ D D+ N +++ Y + A FE M
Sbjct: 215 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 274
Query: 81 PDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR------NVVSWNSMLALHVRAK 130
D ++N +I ++G AL+ FN M + +VV++ S++ L+
Sbjct: 275 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG 334
Query: 131 SFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLS 190
C +F+ M+ G PN + +++ A A G + V IK N I DV+
Sbjct: 335 EIENCRAVFEAMVAEG-LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 393
Query: 191 TCLLTMYVKCGAMDLARDVF----DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEK 246
TCLL Y + A++VF E NVV++N++I YG +G +A+E+F +ME+
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 247 KGPKPNDATFVCVLSACTHA 266
G KPN + +L+AC+ +
Sbjct: 454 DGIKPNVVSVCTLLAACSRS 473
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 140/308 (45%), Gaps = 24/308 (7%)
Query: 26 YNSMIDGHVKNGETGAARKLFDEMPV----RDVWNWNCMIAGYVAVGDLEAANELFERM- 80
YN MI H ++ AR LF EM D ++ +I + G A L + M
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 81 -----PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV----VSWNSMLALHVRAKS 131
P R ++N +I+ C GN ALE +M V V+ N +L+ + +
Sbjct: 206 RAAIAPSRS--TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263
Query: 132 FWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI--KSNNIKVDVLL 189
+ + L F E+M+ + P+ T ++ + LG+ S + + + + K + DV+
Sbjct: 264 YSKALSYF-ELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 322
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEME 245
T ++ +Y G ++ R VF+ M N+VS+N+++ Y +HG AL + +++
Sbjct: 323 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 382
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
+ G P+ ++ C+L++ + + F +MR+ +P V Y ++D G +
Sbjct: 383 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAYGSNGFL 441
Query: 306 KNSEELIK 313
+ E+ +
Sbjct: 442 AEAVEIFR 449
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 140/337 (41%), Gaps = 60/337 (17%)
Query: 1 MYSVFGRVSDARLLFDS----SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VR 52
+YSV G + + R +F++ L ++VSYN+++ + +G +G A + ++ +
Sbjct: 329 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 388
Query: 53 DVWNWNCMIAGYVAVGDLEAANELF------ERMPDRDVVSWNCMIDGCVRVGNVPLALE 106
DV ++ C++ Y A E+F R P+ VV++N +ID G + A+E
Sbjct: 389 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPN--VVTYNALIDAYGSNGFLAEAVE 446
Query: 107 FFNRMPAR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
F +M NVVS ++LA R+K + G + N A S + +
Sbjct: 447 IFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINL-NTAAYNSAIGSY 505
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLT--------------------------- 195
+ +L + ++ ++ +K D + T L++
Sbjct: 506 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTK 565
Query: 196 --------MYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLE 243
Y K G + A +F++M + +V+++ SM+ Y KA ELFLE
Sbjct: 566 EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLE 625
Query: 244 MEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
ME G +P+ ++ A G + DLMR
Sbjct: 626 MEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMR 662
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 19/260 (7%)
Query: 25 SYNSMIDGHVKNGETGAA----RKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM 80
+YN++I+ +G A +K+ D D+ N +++ Y + A FE M
Sbjct: 83 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 142
Query: 81 PDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR------NVVSWNSMLALHVRAK 130
D ++N +I ++G AL+ FN M + +VV++ S++ L+
Sbjct: 143 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG 202
Query: 131 SFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLS 190
C +F+ M+ G PN + +++ A A G + V IK N I DV+
Sbjct: 203 EIENCRAVFEAMVAEG-LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 261
Query: 191 TCLLTMYVKCGAMDLARDVF----DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEK 246
TCLL Y + A++VF E NVV++N++I YG +G +A+E+F +ME+
Sbjct: 262 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321
Query: 247 KGPKPNDATFVCVLSACTHA 266
G KPN + +L+AC+ +
Sbjct: 322 DGIKPNVVSVCTLLAACSRS 341
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 140/308 (45%), Gaps = 24/308 (7%)
Query: 26 YNSMIDGHVKNGETGAARKLFDEMPV----RDVWNWNCMIAGYVAVGDLEAANELFERM- 80
YN MI H ++ AR LF EM D ++ +I + G A L + M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 81 -----PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV----VSWNSMLALHVRAKS 131
P R ++N +I+ C GN ALE +M V V+ N +L+ + +
Sbjct: 74 RAAIAPSRS--TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 131
Query: 132 FWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI--KSNNIKVDVLL 189
+ + L F E+M+ + P+ T ++ + LG+ S + + + + K + DV+
Sbjct: 132 YSKALSYF-ELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 190
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEME 245
T ++ +Y G ++ R VF+ M N+VS+N+++ Y +HG AL + +++
Sbjct: 191 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 250
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
+ G P+ ++ C+L++ + + F +MR+ +P V Y ++D G +
Sbjct: 251 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAYGSNGFL 309
Query: 306 KNSEELIK 313
+ E+ +
Sbjct: 310 AEAVEIFR 317
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 140/337 (41%), Gaps = 60/337 (17%)
Query: 1 MYSVFGRVSDARLLFDS----SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VR 52
+YSV G + + R +F++ L ++VSYN+++ + +G +G A + ++ +
Sbjct: 197 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 256
Query: 53 DVWNWNCMIAGYVAVGDLEAANELF------ERMPDRDVVSWNCMIDGCVRVGNVPLALE 106
DV ++ C++ Y A E+F R P+ VV++N +ID G + A+E
Sbjct: 257 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPN--VVTYNALIDAYGSNGFLAEAVE 314
Query: 107 FFNRMPAR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
F +M NVVS ++LA R+K + G + N A S + +
Sbjct: 315 IFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINL-NTAAYNSAIGSY 373
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLT--------------------------- 195
+ +L + ++ ++ +K D + T L++
Sbjct: 374 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTK 433
Query: 196 --------MYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLE 243
Y K G + A +F++M + +V+++ SM+ Y KA ELFLE
Sbjct: 434 EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLE 493
Query: 244 MEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
ME G +P+ ++ A G + DLMR
Sbjct: 494 MEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMR 530
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 148/318 (46%), Gaps = 18/318 (5%)
Query: 12 RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAV 67
R + + ++ +V Y+ +ID K+G A LF+EM ++ DV ++ +I G
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 68 GDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV----VSW 119
G + ++ M R DVV+++ +ID V+ G + A E +N M R + +++
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
NS++ + E +MFD M+ G P+ T ++ + ++ GM + I
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKG-CEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGE 235
S + + + L+ + + G ++ A+++F EM R +VV++ ++ G +G
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
KALE+F +M+K + ++ +A V + W F + ++P V Y +
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD-KGVKPDVVTYNVM 531
Query: 296 VDLLARAGLVKNSEELIK 313
+ L + G + ++ L +
Sbjct: 532 IGGLCKKGSLSEADMLFR 549
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 139/308 (45%), Gaps = 29/308 (9%)
Query: 6 GRVSDARLLFDS----SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRD----VWNW 57
GRVS+A +L D D V+Y +++ K+G + A LF +M R+ V +
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 58 NCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
+ +I G + A LF M + DVV+++ +I G G + M
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 114 RN----VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
RN VV++++++ + V+ E ++++EM+ G A P+ T S++ L
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA-PDTITYNSLIDGFCKENCLH 367
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD----LARDVFDEMPVRNVVSWNSMI 225
+ + S + D++ + L+ Y K +D L R++ + + N +++N+++
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR---- 281
+G+ G A ELF EM +G P+ T+ +L G + + F+ M++
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 282 ----VYNI 285
+YNI
Sbjct: 488 LGIGIYNI 495
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 148/333 (44%), Gaps = 24/333 (7%)
Query: 2 YSVFGRVSDARLLFDSSLTL----DLVSYNSMIDGHVKNGETGAARKLFDEMP----VRD 53
+ + GRVS+A L D + + DLV+ +++I+G G A L D M D
Sbjct: 150 FCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD 209
Query: 54 VWNWNCMIAGYVAVGDLEAANELFERMPDRD----VVSWNCMIDGCVRVGNVPLALEFFN 109
+ ++ G+ A +LF +M +R+ VV ++ +ID + G+ AL FN
Sbjct: 210 EVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 269
Query: 110 RMPAR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL 165
M + +VV+++S++ + + KM EM+ +P+ T +++
Sbjct: 270 EMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI-GRNIIPDVVTFSALIDVFVKE 328
Query: 166 GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSW 221
GKL +++ + + I D + L+ + K + A +FD M + ++V++
Sbjct: 329 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATF-VCVLSACTHAGMVMEGWWYFDLMR 280
+ +I Y + + LF E+ KG PN T+ VL C + + +++
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 281 RVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
R + P V YG ++D L G + + E+ +
Sbjct: 449 R--GVPPSVVTYGILLDGLCDNGELNKALEIFE 479
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 129/313 (41%), Gaps = 44/313 (14%)
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRM----PARNVVSWNSMLALHVRAKSFWECLKMF 139
D ++++ +++G G V A+ +RM ++V+ ++++ E L +
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 140 DEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVK 199
D M+E G P+E T VL G ++ + + ++ NIK V+ + ++ K
Sbjct: 199 DRMVEYGFQ-PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 200 CGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDAT 255
G+ D A +F+EM ++ +VV+++S+I G G + ++ EM + P+ T
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 256 FVCVLSACTHAGMVMEGW-WYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKY 314
F ++ G ++E Y +++ R I P Y ++D + + + ++
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITR--GIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 315 VSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDD 374
+ K EP DI Y +L N+Y R DD
Sbjct: 376 MVSKG-------------------------------CEP-DIVTYSILINSYCKAKRVDD 403
Query: 375 VERVRVMIREKGL 387
R+ I KGL
Sbjct: 404 GMRLFREISSKGL 416
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 147/331 (44%), Gaps = 23/331 (6%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLV----SYNSMIDGHVKNGETGAARKLFDEMPVR----D 53
Y G V A+ F + L LV S+N +I+G G A +L +M D
Sbjct: 232 YCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPD 291
Query: 54 VWNWNCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFN 109
+N + G+ +G + A E+ M D+ DV+++ ++ G ++GN+ + L
Sbjct: 292 SVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK 351
Query: 110 RMPAR-----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
M +R +++ + ML+ + E L +F++M G + P+ V+
Sbjct: 352 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLS-PDLVAYSIVIHGLCK 410
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM----PVRNVVS 220
LGK + +W++ + I + LL + G + AR + D + ++V
Sbjct: 411 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 470
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
+N +I GY G E+ALELF + + G P+ ATF ++ + E D++
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI- 529
Query: 281 RVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
++Y + P V Y ++D A G K+ +EL
Sbjct: 530 KLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 122/283 (43%), Gaps = 24/283 (8%)
Query: 2 YSVFGRVSDA----RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----- 52
+ + G +S A R + D L+ D+++Y ++ G + G L +M R
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFF 108
+ + M++G G ++ A LF +M D+V+++ +I G ++G +AL +
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 109 NRMPARNVV----SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS-VLTACA 163
+ M + ++ + ++L + E + D ++ SGE + + L + V+ A
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL--DIVLYNIVIDGYA 479
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVV 219
G + + + + I V L+ Y K + AR + D + + +VV
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 220 SWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
S+ +++ Y GN + EL EM+ +G P + T+ +
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 582
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 31/274 (11%)
Query: 6 GRVSDARLLFDSSL----TLDLVSYNSMIDGHVKNGETGAARKLF----DEMPVRDVWNW 57
G + +AR L DS + TLD+V YN +IDG+ K+G A +LF + V +
Sbjct: 447 GMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATF 506
Query: 58 NCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
N +I GY ++ A ++ + + VVS+ ++D GN E M A
Sbjct: 507 NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKA 566
Query: 114 RNVVSWNSMLAL---------------HVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
+ N ++ HV + +E K MES P++ T ++
Sbjct: 567 EGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTI 626
Query: 159 LTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
+ + LS +KS N+ L+ G + A + +NV
Sbjct: 627 IQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNV 686
Query: 219 ----VSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
++ ++I + + G+ E A++LF ++ +G
Sbjct: 687 SLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 137/314 (43%), Gaps = 26/314 (8%)
Query: 16 DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANE 75
D +L + SYNS++ H + ET ++ E+ ++ ++ ++ G LE A
Sbjct: 152 DQNLNVSTQSYNSVL-YHFR--ETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDA-V 207
Query: 76 LFERMPD-----RDVVSWNCMIDGCVRVGNVPLALEFFNRM----PARNVVSWNSMLALH 126
LF R + VVS+N ++ G ++G V +A FF + +V S N ++
Sbjct: 208 LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGL 267
Query: 127 VRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW-VHSFIKSNNIKV 185
S E L++ +M + G V ++ ++L HL + G W V + +
Sbjct: 268 CLVGSIAEALELASDMNKHG--VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSP 325
Query: 186 DVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-----NVVSWNSMIMGYGLHGNGEKALEL 240
DV+ T LL + G +D+ + +M R +++ + M+ G G ++AL L
Sbjct: 326 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 385
Query: 241 FLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM--RRVYNIEPKVEHYGCIVDL 298
F +M+ G P+ + V+ G W +D M +R+ P +G ++
Sbjct: 386 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL---PNSRTHGALLLG 442
Query: 299 LARAGLVKNSEELI 312
L + G++ + L+
Sbjct: 443 LCQKGMLLEARSLL 456
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 147/331 (44%), Gaps = 23/331 (6%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLV----SYNSMIDGHVKNGETGAARKLFDEMPVR----D 53
Y G V A+ F + L LV S+N +I+G G A +L +M D
Sbjct: 232 YCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPD 291
Query: 54 VWNWNCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFN 109
+N + G+ +G + A E+ M D+ DV+++ ++ G ++GN+ + L
Sbjct: 292 SVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK 351
Query: 110 RMPAR-----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
M +R +++ + ML+ + E L +F++M G + P+ V+
Sbjct: 352 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLS-PDLVAYSIVIHGLCK 410
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM----PVRNVVS 220
LGK + +W++ + I + LL + G + AR + D + ++V
Sbjct: 411 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 470
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
+N +I GY G E+ALELF + + G P+ ATF ++ + E D++
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI- 529
Query: 281 RVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
++Y + P V Y ++D A G K+ +EL
Sbjct: 530 KLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 122/283 (43%), Gaps = 24/283 (8%)
Query: 2 YSVFGRVSDA----RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----- 52
+ + G +S A R + D L+ D+++Y ++ G + G L +M R
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFF 108
+ + M++G G ++ A LF +M D+V+++ +I G ++G +AL +
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 109 NRMPARNVV----SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS-VLTACA 163
+ M + ++ + ++L + E + D ++ SGE + + L + V+ A
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL--DIVLYNIVIDGYA 479
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVV 219
G + + + + I V L+ Y K + AR + D + + +VV
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 220 SWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
S+ +++ Y GN + EL EM+ +G P + T+ +
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 582
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 31/274 (11%)
Query: 6 GRVSDARLLFDSSL----TLDLVSYNSMIDGHVKNGETGAARKLF----DEMPVRDVWNW 57
G + +AR L DS + TLD+V YN +IDG+ K+G A +LF + V +
Sbjct: 447 GMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATF 506
Query: 58 NCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
N +I GY ++ A ++ + + VVS+ ++D GN E M A
Sbjct: 507 NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKA 566
Query: 114 RNVVSWNSMLAL---------------HVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
+ N ++ HV + +E K MES P++ T ++
Sbjct: 567 EGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTI 626
Query: 159 LTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
+ + LS +KS N+ L+ G + A + +NV
Sbjct: 627 IQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNV 686
Query: 219 ----VSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
++ ++I + + G+ E A++LF ++ +G
Sbjct: 687 SLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 137/314 (43%), Gaps = 26/314 (8%)
Query: 16 DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANE 75
D +L + SYNS++ H + ET ++ E+ ++ ++ ++ G LE A
Sbjct: 152 DQNLNVSTQSYNSVL-YHFR--ETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDA-V 207
Query: 76 LFERMPD-----RDVVSWNCMIDGCVRVGNVPLALEFFNRM----PARNVVSWNSMLALH 126
LF R + VVS+N ++ G ++G V +A FF + +V S N ++
Sbjct: 208 LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGL 267
Query: 127 VRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW-VHSFIKSNNIKV 185
S E L++ +M + G V ++ ++L HL + G W V + +
Sbjct: 268 CLVGSIAEALELASDMNKHG--VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSP 325
Query: 186 DVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-----NVVSWNSMIMGYGLHGNGEKALEL 240
DV+ T LL + G +D+ + +M R +++ + M+ G G ++AL L
Sbjct: 326 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 385
Query: 241 FLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM--RRVYNIEPKVEHYGCIVDL 298
F +M+ G P+ + V+ G W +D M +R+ P +G ++
Sbjct: 386 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL---PNSRTHGALLLG 442
Query: 299 LARAGLVKNSEELI 312
L + G++ + L+
Sbjct: 443 LCQKGMLLEARSLL 456
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 134/284 (47%), Gaps = 19/284 (6%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGD 69
+ +D+V+YN+++ G K G A KLF+EM R D + +I G+ +G+
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 70 LEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV----VSWNS 121
L+ A ELF++M ++ DVV++N ++DG +VG++ A E + M ++ + +S++
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
++ E +++DEM+ S P S++ G S G + S
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMI-SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP------VRNVVSWNSMIMGYGLHGNGE 235
D + L+ +V+ M A + +M V +V ++NS++ G+ +
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM 279
+A + +M ++G P+ +T+ C+++ + E + D M
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 171/402 (42%), Gaps = 31/402 (7%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWN----WNCMIAGYVAVGD 69
+ S L+ D +Y S++ K G+ K+F +M RDV ++ M++ + G+
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390
Query: 70 LEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRM----PARNVVSWNS 121
L+ A F + + D V + +I G R G + +A+ N M A +VV++N+
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
+L + K E K+F+EM E P+ TL ++ LG L M + +K
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERA-LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV----VSWNSMIMGYGLHGNGEKA 237
I++DV+ LL + K G +D A++++ +M + + +S++ ++ G+ +A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVD 297
++ EM K KP ++ +G +G + + M P Y ++
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS-EGFVPDCISYNTLIY 628
Query: 298 LLARA-------GLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIE 350
R GLVK EE + + C + E E+V +++IE
Sbjct: 629 GFVREENMSKAFGLVKKMEE--EQGGLVPDVFTYNSILHGFCRQNQMKE-AEVVLRKMIE 685
Query: 351 --LEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKE 390
+ P D Y + N + +Q + R+ + ++G +
Sbjct: 686 RGVNP-DRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 122/262 (46%), Gaps = 17/262 (6%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLEAANELF 77
D+V+YN++I + G A +L + MP + V+ +N +I G G E A E+F
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 78 ERM----PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVS----WNSMLALHVRA 129
M D ++ ++ + G+V + F+ M +R+VV ++SM++L R+
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
+ + L F+ + E+G +P+ ++ G +SV M + + + +DV+
Sbjct: 389 GNLDKALMYFNSVKEAG-LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVRNVV----SWNSMIMGYGLHGNGEKALELFLEME 245
+L K + A +F+EM R + + +I G+ GN + A+ELF +M+
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 246 KKGPKPNDATFVCVLSACTHAG 267
+K + + T+ +L G
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVG 529
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 43/256 (16%)
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ +I YV L A+E F + + + + N +I VR+G V LA
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA-------- 219
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL-SVG 171
W ++ E+ SG + N TL ++ A GK+ VG
Sbjct: 220 ------WG-----------------VYQEISRSGVGI-NVYTLNIMVNALCKDGKMEKVG 255
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN----VVSWNSMIMG 227
++ S ++ + D++ L++ Y G M+ A ++ + MP + V ++N++I G
Sbjct: 256 TFL-SQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 314
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
HG E+A E+F EM + G P+ T+ +L G V+E F MR ++ P
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS-RDVVP 373
Query: 288 KVEHYGCIVDLLARAG 303
+ + ++ L R+G
Sbjct: 374 DLVCFSSMMSLFTRSG 389
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 105/229 (45%), Gaps = 17/229 (7%)
Query: 5 FGRVSDARLLF----DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW----N 56
G + +A LF + + LD+V+YN+++DG K G+ A++++ +M +++ +
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRD----VVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ ++ + G L A +++ M ++ V+ N MI G R GN F +M
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 113 AR----NVVSWNSMLALHVRAKSFWECLKMFDEM-MESGEAVPNEATLVSVLTACAHLGK 167
+ + +S+N+++ VR ++ + + +M E G VP+ T S+L +
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
+ V + + D TC++ +V + A + DEM R
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 25/320 (7%)
Query: 6 GRVSDARLLFDS----SLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------PVRDVW 55
GRVS A +F+ +LD+ SY S+I +G A +F +M P +
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITY 246
Query: 56 NWNCMIAGYVAVGDLEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
N + G + L E+M D ++N +I C R A + F M
Sbjct: 247 NVILNVFGKMGT-PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM 305
Query: 112 PAR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
A + V++N++L ++ ++ E +K+ +EM+ +G + P+ T S+++A A G
Sbjct: 306 KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFS-PSIVTYNSLISAYARDGM 364
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP----VRNVVSWNS 223
L M + + + K DV T LL+ + + G ++ A +F+EM N+ ++N+
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVY 283
I YG G + +++F E+ G P+ T+ +L+ GM E F M+R
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA- 483
Query: 284 NIEPKVEHYGCIVDLLARAG 303
P+ E + ++ +R G
Sbjct: 484 GFVPERETFNTLISAYSRCG 503
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 144/309 (46%), Gaps = 23/309 (7%)
Query: 23 LVSYNSMIDGHVKNGE-----TGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELF 77
L++YN +++ K G T K+ + D + +N +I + A ++F
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVF 302
Query: 78 ERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP----ARNVVSWNSMLALHVRA 129
E M D V++N ++D + A++ N M + ++V++NS+++ + R
Sbjct: 303 EEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARD 362
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
E +++ ++M E G P+ T ++L+ GK+ M + +++ K ++
Sbjct: 363 GMLDEAMELKNQMAEKGTK-PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICT 421
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPV----RNVVSWNSMIMGYGLHGNGEKALELFLEME 245
+ MY G +FDE+ V ++V+WN+++ +G +G + +F EM+
Sbjct: 422 FNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 481
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYN--IEPKVEHYGCIVDLLARAG 303
+ G P TF ++SA + G + + RR+ + + P + Y ++ LAR G
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVY---RRMLDAGVTPDLSTYNTVLAALARGG 538
Query: 304 LVKNSEELI 312
+ + SE+++
Sbjct: 539 MWEQSEKVL 547
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 144/311 (46%), Gaps = 22/311 (7%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLEA 72
+ + D V+YN+++D + K+ A K+ +EM + + +N +I+ Y G L+
Sbjct: 308 AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDE 367
Query: 73 ANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMP----ARNVVSWNSMLA 124
A EL +M ++ DV ++ ++ G R G V A+ F M N+ ++N+ +
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 125 LHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIK 184
++ F E +K+FDE+ G + P+ T ++L G S V +K
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLS-PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Query: 185 VDVLLSTCLLTMYVKCG----AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALEL 240
+ L++ Y +CG AM + R + D ++ ++N+++ G E++ ++
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546
Query: 241 FLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYN--IEPKVEHYGCIVDL 298
EME KPN+ T+ +L A + + G + L VY+ IEP+ +V +
Sbjct: 547 LAEMEDGRCKPNELTYCSLLHAYANGKEI--GLMH-SLAEEVYSGVIEPRAVLLKTLVLV 603
Query: 299 LARAGLVKNSE 309
++ L+ +E
Sbjct: 604 CSKCDLLPEAE 614
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 119/295 (40%), Gaps = 45/295 (15%)
Query: 26 YNSMIDGHV---------KNGETGAARKLFDEMP----VRDVWNWNCMIAGYVAVGDLEA 72
Y SM+D V K G +A +F+ + DV+++ +I+ + G
Sbjct: 167 YQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYRE 226
Query: 73 ANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSF 132
A +F++M + DGC ++++N +L + + +
Sbjct: 227 AVNVFKKMEE----------DGC-----------------KPTLITYNVILNVFGKMGTP 259
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
W + E M+S P+ T +++T C V +K+ D +
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 193 LLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
LL +Y K A V +EM + ++V++NS+I Y G ++A+EL +M +KG
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 249 PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
KP+ T+ +LS AG V F+ MR +P + + + + G
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRG 433
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 25/273 (9%)
Query: 6 GRVSDARLLFD----SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPV----RDVWNW 57
G+V A +F+ + ++ ++N+ I + G+ K+FDE+ V D+ W
Sbjct: 398 GKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTW 457
Query: 58 NCMIAGYVAVGDLEAANELFERM------PDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
N ++A + G + +F+ M P+R+ ++N +I R G+ A+ + RM
Sbjct: 458 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE--TFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 112 PARNVV----SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
V ++N++LA R WE + ME G PNE T S+L A A+ +
Sbjct: 516 LDAGVTPDLSTYNTVLAALARG-GMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE 574
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNS 223
+ + + + S I+ +L L+ + KC + A F E+ R ++ + NS
Sbjct: 575 IGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNS 634
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATF 256
M+ YG KA + M+++G P+ AT+
Sbjct: 635 MVSIYGRRQMVAKANGVLDYMKERGFTPSMATY 667
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 126/295 (42%), Gaps = 17/295 (5%)
Query: 12 RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWNWNCMIAGYV-- 65
R + D+ +T DL +YN+++ + G + K+ EM + + ++ Y
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572
Query: 66 -AVGDLEA-ANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSW 119
+G + + A E++ + + V ++ C + +P A F+ + R ++ +
Sbjct: 573 KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTL 632
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
NSM++++ R + + + D M E G P+ AT S++ + + I
Sbjct: 633 NSMVSIYGRRQMVAKANGVLDYMKERG-FTPSMATYNSLMYMHSRSADFGKSEEILREIL 691
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP----VRNVVSWNSMIMGYGLHGNGE 235
+ IK D++ ++ Y + M A +F EM V +V+++N+ I Y E
Sbjct: 692 AKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFE 751
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
+A+ + M K G +PN T+ ++ E + + +R + PK E
Sbjct: 752 EAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKGE 806
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 148/307 (48%), Gaps = 23/307 (7%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNC-----MIAGYVAVGDLE 71
S+ + V YN++I+G K G+T A+++ + ++ +C +I G+V VGD +
Sbjct: 548 SNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTD 607
Query: 72 AANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSML 123
+A E + M + +VV++ +I+G + + LALE + M + ++ ++ +++
Sbjct: 608 SAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALI 667
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNI 183
+ +F E+ E G +PN + S+++ +LGK+ + ++ + ++ I
Sbjct: 668 DGFCKKNDMKTAYTLFSELPELG-LMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI 726
Query: 184 KVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN--SMIMGYGLHGNGE--KALE 239
D+ T ++ +K G ++LA D++ E+ +V M++ GL G+ KA +
Sbjct: 727 SCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASK 786
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
+ EM+KK PN + V++ G + E + D M +E + H + +LL
Sbjct: 787 MLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEM-----LEKGIVHDDTVFNLL 841
Query: 300 ARAGLVK 306
+ K
Sbjct: 842 VSGRVEK 848
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 175/389 (44%), Gaps = 63/389 (16%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WNWNCMIAGYVAVGDLEAANELF 77
++V YN+M+ H + AR +F EM + + + ++ +I G+ D + A ++
Sbjct: 483 NVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVI 542
Query: 78 ERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP-----ARNVVSWNSMLALHVR 128
+M + + V +N +I+G +VG A E + + + S+NS++ V+
Sbjct: 543 NQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVK 602
Query: 129 AKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVL 188
++ + EM E+G++ PN T S++ ++ + + + +KS +K+D+
Sbjct: 603 VGDTDSAVETYREMSENGKS-PNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLP 661
Query: 189 LSTCLLTMYVKCGAMDLARDVFDEMP----VRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
L+ + K M A +F E+P + NV +NS+I G+ G + A++L+ +M
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
G + T+ ++ G++ +G NI + Y ++DL G+
Sbjct: 722 VNDGISCDLFTYTTMID-----GLLKDG-----------NINLASDLYSELLDL----GI 761
Query: 305 VKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIV--AKRLIELEPMDIGPYIML 362
V +E++ V V S+ G+ + +K L E++ D+ P ++L
Sbjct: 762 V--PDEILHMVLVNGL-----------------SKKGQFLKASKMLEEMKKKDVTPNVLL 802
Query: 363 SNTYAA----QGRWDDVERVRVMIREKGL 387
+T A +G ++ R+ + EKG+
Sbjct: 803 YSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 151/361 (41%), Gaps = 63/361 (17%)
Query: 7 RVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWNWNCMIA 62
RV D + F + + +++ S+++G+ K E G A LF+ M D ++ M+
Sbjct: 331 RVMDEMVGF--GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVE 388
Query: 63 GYVAVGDLEAANELFERMPDRDV----VSWNCMIDGCVRVGNVPLALEFFN--------- 109
+ ++E A E + RM + V + MI GC++ + ALE FN
Sbjct: 389 WFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAH 448
Query: 110 ------------------------RMPAR-----NVVSWNSMLALHVRAKSFWECLKMFD 140
+M + NVV +N+M+ H R K+ +F
Sbjct: 449 GFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFS 508
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMW-VHSFIKSNNIKVDVLLSTCLLTMYVK 199
EM+E G PN T S+L K W V + + ++N + + ++ ++ K
Sbjct: 509 EMLEKGLE-PNNFTY-SILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCK 566
Query: 200 CGAMDLARDVFDEMPVR-----NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDA 254
G A+++ + + S+NS+I G+ G+ + A+E + EM + G PN
Sbjct: 567 VGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVV 626
Query: 255 TFVCVLSA-CTHAGMVMEGWWYFDLMRRVYNIEPKVE--HYGCIVDLLARAGLVKNSEEL 311
TF +++ C M + ++ + ++E K++ YG ++D + +K + L
Sbjct: 627 TFTSLINGFCKSNRMDLA----LEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTL 682
Query: 312 I 312
Sbjct: 683 F 683
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 26/258 (10%)
Query: 17 SSLTLDLVSYN-SMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANE 75
S+L + VS N ++I + N ++++ E+ R +N ++ Y+ ++ A +
Sbjct: 134 SNLLVMFVSNNPTLIPNVMVNNLVDSSKRFGFELTPRA---FNYLLNAYIRNKRMDYAVD 190
Query: 76 LFERMPDRDVVSW----NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRA-- 129
F M DR VV + N ++ VR + A E +N+M V N L +RA
Sbjct: 191 CFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASL 250
Query: 130 --KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDV 187
+ E +K+F +M G A P+ + A L + + ++ K+ V
Sbjct: 251 RERKPEEAVKIFRRVMSRG-AEPDGLLFSLAVQAACKTPDLVMAL---DLLREMRGKLGV 306
Query: 188 LLS----TCLLTMYVKCGAMDLARDVFDEM-----PVRNVVSWNSMIMGYGLHGNGEKAL 238
S T ++ +VK G M+ A V DEM P+ +V++ S++ GY KAL
Sbjct: 307 PASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM-SVIAATSLVNGYCKGNELGKAL 365
Query: 239 ELFLEMEKKGPKPNDATF 256
+LF ME++G P+ F
Sbjct: 366 DLFNRMEEEGLAPDKVMF 383
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 152/327 (46%), Gaps = 23/327 (7%)
Query: 11 ARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------PVRDVWNWNCMIAGY 64
R + ++ + D+ +YNS+I G KN +LFDEM P D+W++N +++ Y
Sbjct: 71 TRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSP--DMWSYNTLMSCY 128
Query: 65 VAVGDL-EAANELFERMPDRDVV----SWNCMIDGCVRVGNVPLALEFFNRMPAR---NV 116
+G EA L E + +V ++N ++D + G+ A+E F + +R +
Sbjct: 129 FKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPEL 188
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
+++N ++ +++ M E+ +SG PN T ++L ++ G+ +
Sbjct: 189 MTYNILINGLCKSRRVGSVDWMMRELKKSG-YTPNAVTYTTMLKMYFKTKRIEKGLQLFL 247
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM-----PVRNVVSWNSMIMGYGLH 231
+K D + +++ +K G + A + E+ +++VS+N+++ Y
Sbjct: 248 KMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKD 307
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
GN + +L E+E KG KP+D T +++ + G + + + ++P V
Sbjct: 308 GNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEM-GMQPSVVT 366
Query: 292 YGCIVDLLARAGLVKNSEELIKYVSVK 318
C++D L +AG V + L + V+
Sbjct: 367 CNCLIDGLCKAGHVDRAMRLFASMEVR 393
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 121/278 (43%), Gaps = 13/278 (4%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFF 108
DV +N +I GY ++ A + RM + DV ++N +I G + + L+ F
Sbjct: 47 DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLF 106
Query: 109 NRMPARNVV----SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
+ M + S+N++++ + + E K+ E + VP T +L A
Sbjct: 107 DEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCK 166
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC---GAMD-LARDVFDEMPVRNVVS 220
G + + +KS +K +++ L+ K G++D + R++ N V+
Sbjct: 167 SGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVT 225
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
+ +M+ Y EK L+LFL+M+K+G + V+SA G E + +
Sbjct: 226 YTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELV 285
Query: 281 RVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
R + Y +++L + G + ++L++ + +K
Sbjct: 286 RSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMK 323
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 6 GRVSDA-----RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
GR +A L+ + + D+VSYN++++ + K+G A L +E+ ++ D +
Sbjct: 272 GRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYT 331
Query: 57 WNCMIAGYVAVGDLEAANE----LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ G + +G+ A + + E VV+ NC+IDG + G+V A+ F M
Sbjct: 332 HTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME 391
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA 153
R+ ++ S++ + K+ G +P+ A
Sbjct: 392 VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSA 432
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 124/251 (49%), Gaps = 17/251 (6%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLEAANELF 77
+L +YN +++ K+G T A ++FDEM R ++ +N +I G L AN++
Sbjct: 267 NLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVV 326
Query: 78 ERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRA 129
++M + +++++N +IDG VG + AL + +R ++V++N +++ R
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
KM EM E G P++ T ++ A + + + ++ + DV
Sbjct: 387 GDTSGAAKMVKEMEERG-IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT 445
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVRNV----VSWNSMIMGYGLHGNGEKALELFLEME 245
+ L+ + G M+ A +F M +N V +N+MI+GY G+ +AL+L EME
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505
Query: 246 KKGPKPNDATF 256
+K PN A++
Sbjct: 506 EKELAPNVASY 516
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 138/308 (44%), Gaps = 18/308 (5%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWNWNCMIAGYVAVGDLEAANELF 77
++V Y ++IDG K GE A+ LF EM V + + +I G G + E++
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMY 256
Query: 78 ERMPDRDVV----SWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRA 129
E+M + V ++NC+++ + G A + F+ M R N+V++N+++ R
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
E K+ D+M G PN T +++ +GKL + + +KS + ++
Sbjct: 317 MKLNEANKVVDQMKSDG-INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVRNV----VSWNSMIMGYGLHGNGEKALELFLEME 245
L++ + + G A + EM R + V++ +I + N EKA++L L ME
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
+ G P+ T+ ++ G + E F M N EP Y ++ + G
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE-KNCEPNEVIYNTMILGYCKEGSS 494
Query: 306 KNSEELIK 313
+ +L+K
Sbjct: 495 YRALKLLK 502
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV 185
+V+++S + F+EM+++G VP +LT +G S W SF N KV
Sbjct: 104 YVQSQSLNLSISYFNEMVDNG-FVPGSNCFNYLLTFV--VGSSSFNQW-WSFFNENKSKV 159
Query: 186 --DVLLSTCLLTMYVKCGAMDLARDVFDEMP----VRNVVSWNSMIMGYGLHGNGEKALE 239
DV L+ + G ++ + D+ E+ NVV + ++I G G EKA +
Sbjct: 160 VLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
LF EM K G N+ T+ +++ G+ +G+ ++ M+ + P + Y C+++ L
Sbjct: 220 LFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED-GVFPNLYTYNCVMNQL 278
Query: 300 ARAGLVKNS 308
+ G K++
Sbjct: 279 CKDGRTKDA 287
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW----NWNCMIAG 63
+S R L L+ LV+YN ++ G + G+T A K+ EM R + + +I
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 64 YVAVGDLEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV--- 116
+ ++E A +L M + DV +++ +I G G + A F M +N
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPN 477
Query: 117 -VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT 154
V +N+M+ + + S + LK+ E ME E PN A+
Sbjct: 478 EVIYNTMILGYCKEGSSYRALKLLKE-MEEKELAPNVAS 515
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 1/170 (0%)
Query: 134 ECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCL 193
E +++ D + G A+ + L+ + C L VH I + DV +
Sbjct: 102 EAVEVLDYLENKGYAM-DLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAI 160
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPND 253
+ MY C ++D A VF+EMP N + M+ + +G GE+A++LF +++G KPN
Sbjct: 161 IEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNG 220
Query: 254 ATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
F V S CT G V EG F M R Y I P +EHY + +LA +G
Sbjct: 221 EIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSG 270
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 17/261 (6%)
Query: 24 VSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLEAANELFER 79
V YN+MIDG+ + G+ AR + M + D +NC+I + +G++E A + +
Sbjct: 390 VIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNK 449
Query: 80 MPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRAKS 131
M + V ++N +I G R + M NVVS+ +++ +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 132 FWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLST 191
E ++ ME P ++ C GK+ + I+++++
Sbjct: 510 LLEA-QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYN 568
Query: 192 CLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEMEKK 247
L+ G + A D+ E+ + +V ++NS+I GYG GN ++ + L+ EM++
Sbjct: 569 TLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS 628
Query: 248 GPKPNDATFVCVLSACTHAGM 268
G KP T+ ++S CT G+
Sbjct: 629 GIKPTLKTYHLLISLCTKEGI 649
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 125/287 (43%), Gaps = 18/287 (6%)
Query: 26 YNSMIDGHVKNGETGAARKLFDEMP----VRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
Y I VK + G +LF+ M V+ +N +I G + A +LF+ M
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 82 DR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV----VSWNSMLALHVRAKSFW 133
R ++++N +IDG + GN + + RM A ++ +++N++L +A
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 134 ECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCL 193
+ + EM + G VP+ T + + K + V+ + +K++ + L
Sbjct: 302 DAENVLKEMKDLG-FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSIL 360
Query: 194 LTMYVKCGAMDLARDVFD-EMP---VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP 249
L K G ++ A ++ EM V N V +N+MI GY G+ A MEK+G
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Query: 250 KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIV 296
KP+ + C++ G + + M ++ + P VE Y ++
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKM-KLKGVSPSVETYNILI 466
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 141/332 (42%), Gaps = 28/332 (8%)
Query: 7 RVSDARLLFDSSLTL----DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WNWN 58
R++DA LFD L L++YN++IDG+ K G + K+ + M + +N
Sbjct: 229 RMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFN 288
Query: 59 CMIAGYVAVGDLEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEFF----NR 110
++ G G +E A + + M D D +++ + DG AL + +
Sbjct: 289 TLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS 348
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
N + + +L + + ++ M G VPNE +++ G L
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG-LVPNEVIYNTMIDGYCRKGDLVG 407
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIM 226
++ +K D L CL+ + + G M+ A ++M ++ +V ++N +I
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWY-FDLMRRVYNI 285
GYG +K ++ EME G PN ++ +++ ++E D+ R +
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDR--GV 525
Query: 286 EPKVEHYGCIVDLLARAGLVKN----SEELIK 313
PKV Y ++D G +++ S+E++K
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 127 VRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVD 186
V+ K F + +F ++ES + P++ + A L + G+ + + +K + I
Sbjct: 155 VKTKQFRVTINVFLNILES-DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPS 213
Query: 187 VLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFL 242
V + L+ K M+ A +FDEM R +++++N++I GY GN EK+ ++
Sbjct: 214 VFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE 273
Query: 243 EMEKKGPKPNDATFVCVLSACTHAGMV 269
M+ +P+ TF +L AGMV
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMV 300
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 136/303 (44%), Gaps = 17/303 (5%)
Query: 24 VSYNSMIDGHVKNGETGAARKLFDEM----PVRDVWNWNCMIAGYVAVGDLEAANELFER 79
V Y ++I K A +L +EM V D +N +I G + A ++ R
Sbjct: 253 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 312
Query: 80 MPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWEC 135
M R D +++ +++G ++G V A + F R+P +V +N+++ V +
Sbjct: 313 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDA 372
Query: 136 LKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLT 195
+ +M+ S VP+ T S++ G + + + V +++ K +V T L+
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 196 MYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKP 251
+ K G +D A +V +EM N V +N +I + +A+E+F EM +KG KP
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 252 NDATFVCVLSACTHAGMVMEGWWYFDLMRRVYN--IEPKVEHYGCIVDLLARAGLVKNSE 309
+ TF ++S + W L+R + + + Y +++ R G +K +
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALW---LLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 310 ELI 312
+L+
Sbjct: 550 KLV 552
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 156/361 (43%), Gaps = 54/361 (14%)
Query: 5 FGRVSDARLLFDSSL----TLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
F R+++A + + L D ++Y +++G K G AA+ LF +P ++ +N +
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTL 359
Query: 61 IAGYVAVGDLEAANELFERM-------PD------------------------------- 82
I G+V G L+ A + M PD
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 83 --RDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRAKSFWECL 136
+V S+ ++DG ++G + A N M A N V +N +++ + E +
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 137 KMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTM 196
++F EM G P+ T S+++ + ++ +W+ + S + + + L+
Sbjct: 480 EIFREMPRKG-CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 197 YVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
+++ G + AR + +EM + + +++NS+I G G +KA LF +M + G P+
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 253 DATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
+ + +++ +GMV E + M + P + + +++ L RAG +++ +
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEM-VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 657
Query: 313 K 313
+
Sbjct: 658 R 658
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 121/272 (44%), Gaps = 17/272 (6%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLEAANELF 77
++ SY ++DG K G+ A + +EM + +NC+I+ + + A E+F
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 78 ERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRA 129
MP + DV ++N +I G V + AL M + N V++N+++ +R
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
E K+ +EM+ G + +E T S++ G++ + + + +
Sbjct: 543 GEIKEARKLVNEMVFQGSPL-DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEKALELFLEME 245
L+ + G ++ A + EM +R ++V++NS+I G G E L +F +++
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
+G P+ TF ++S G V + D
Sbjct: 662 AEGIPPDTVTFNTLMSWLCKGGFVYDACLLLD 693
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 5/185 (2%)
Query: 134 ECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCL 193
E L++ D + + G V + L+ + C + L VH I +D +
Sbjct: 95 EALEVIDILEDKGYIV-DFPRLLGLAKLCGEVEALEEARVVHDCITP----LDARSYHTV 149
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPND 253
+ MY C + D A +VF+EMP RN +W +MI +G GE+A+++F ++G KP+
Sbjct: 150 IEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDK 209
Query: 254 ATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
F V AC G + EG +F+ M R Y + +E Y ++++LA G + + + ++
Sbjct: 210 EIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVE 269
Query: 314 YVSVK 318
++V+
Sbjct: 270 RMTVE 274
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 139/305 (45%), Gaps = 18/305 (5%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVG 68
L+ D ++V++ ++I+G K GE A LF M R D+ ++ +I GY G
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 69 DLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWN 120
L ++LF + + DVV ++ ID V+ G++ A + RM + NVV++
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 121 SMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS 180
++ + +E M+ ++++ G P+ T S++ G L G ++ +
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGME-PSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 181 NNIKVDVLLSTCLLTMYVKCG----AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
DV++ L+ K G AM + + + NVV +NS+I G+ ++
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIV 296
AL++F M G KP+ ATF V+ G + E + F M ++ +EP Y ++
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM-GLEPDALAYCTLI 573
Query: 297 DLLAR 301
D +
Sbjct: 574 DAFCK 578
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 143/312 (45%), Gaps = 28/312 (8%)
Query: 23 LVSYNSMIDGHVKNGETGAARKLFDEM-----PVRDVWNWNCMIAGYVAVGDLEAANELF 77
+V+Y+S+IDG K G + L+++M P DV + ++ G G + A
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP-PDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 78 ERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMP----ARNVVSWNSMLALHVRA 129
+M + +VV +N +IDG R+ AL+ F M +V ++ +++ + +
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTA-CAHLGKLSVGMWVHSFIKSNNIKVDVL 188
E L +F M + G P+ +++ A C H+ K ++G+ + ++ N I D+
Sbjct: 545 GRLEEALFLFFRMFKMGLE-PDALAYCTLIDAFCKHM-KPTIGLQLFDLMQRNKISADIA 602
Query: 189 LSTCLLTMYVKCGAMDLARDVFDEM------PVRNVVSWNSMIMGYGLHGNGEKALELFL 242
+ ++ + KC ++ A F+ + P ++V++N+MI GY ++A +F
Sbjct: 603 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP--DIVTYNTMICGYCSLRRLDEAERIF- 659
Query: 243 EMEKKGP-KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLAR 301
E+ K P PN T ++ + F +M +P YGC++D ++
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE-KGSKPNAVTYGCLMDWFSK 718
Query: 302 AGLVKNSEELIK 313
+ ++ S +L +
Sbjct: 719 SVDIEGSFKLFE 730
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 123/280 (43%), Gaps = 19/280 (6%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGD 69
+ S+ L++V +NS+IDG + A K+F M + DV + ++ + G
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 70 LEAANELFERM----PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVS-----WN 120
LE A LF RM + D +++ +ID + + L+ F+ M RN +S N
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM-QRNKISADIAVCN 605
Query: 121 SMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS 180
++ L + + K F+ ++E G+ P+ T +++ L +L + +K
Sbjct: 606 VVIHLLFKCHRIEDASKFFNNLIE-GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 181 NNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR----NVVSWNSMIMGYGLHGNGEK 236
+ + T L+ + K MD A +F M + N V++ ++ + + E
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 724
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF 276
+ +LF EM++KG P+ ++ ++ G V E F
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 105/262 (40%), Gaps = 46/262 (17%)
Query: 34 VKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMID 93
++NG A K+FDEM ++N + + +R D DV + +++
Sbjct: 110 IRNGMFDVADKVFDEMITNRGKDFNVL-------------GSIRDRSLDADVCKF--LME 154
Query: 94 GCVRVGNVPLALEFFNRMPARNVV----SWNSMLALHVRAKSFWECLKMFDEMMESGEAV 149
C R G V ALE F VV S ML + + FD++ G
Sbjct: 155 CCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEP 214
Query: 150 PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVL---------------LSTCLL 194
+ VL A G+++ + H + +V ++ +++ LL
Sbjct: 215 SGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLL 274
Query: 195 TMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDA 254
++ + CG P NVV++ ++I G+ G ++A +LF ME++G +P+
Sbjct: 275 SLVLDCG------------PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 255 TFVCVLSACTHAGMVMEGWWYF 276
+ ++ AGM+ G F
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLF 344
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 21/268 (7%)
Query: 6 GRVSDARLLF----DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNW 57
GR+ +A LF L D ++Y ++ID K+ + +LFD M D+
Sbjct: 545 GRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 604
Query: 58 NCMIAGYVAVGDLEAA----NELFERMPDRDVVSWNCMIDGCV---RVGNVPLALEFFNR 110
N +I +E A N L E + D+V++N MI G R+ E
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 111 MP-ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
P N V+ ++ + + ++MF M E G PN T ++ + +
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK-PNAVTYGCLMDWFSKSVDIE 723
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF----DEMPVRNVVSWNSMI 225
+ ++ I ++ + ++ K G +D A ++F D + +VV++ +I
Sbjct: 724 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPND 253
GY G +A L+ M + G KP+D
Sbjct: 784 RGYCKVGRLVEAALLYEHMLRNGVKPDD 811