Miyakogusa Predicted Gene
- Lj0g3v0206139.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0206139.3 Non Chatacterized Hit- tr|B9EX04|B9EX04_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,50,4e-19,Ankyrin repeat,Ankyrin repeat-containing domain;
ANK_REPEAT,Ankyrin repeat; ANK_REP_REGION,Ankyrin r,CUFF.13235.3
(108 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G28840.1 | Symbols: XBAT31 | XB3 ortholog 1 in Arabidopsis th... 170 2e-43
AT2G28840.2 | Symbols: XBAT31 | XB3 ortholog 1 in Arabidopsis th... 166 3e-42
AT5G57740.1 | Symbols: XBAT32 | XB3 ortholog 2 in Arabidopsis th... 49 8e-07
AT5G07270.1 | Symbols: XBAT33 | XB3 ortholog 3 in Arabidopsis th... 48 1e-06
>AT2G28840.1 | Symbols: XBAT31 | XB3 ortholog 1 in Arabidopsis
thaliana | chr2:12378542-12380474 FORWARD LENGTH=456
Length = 456
Score = 170 bits (430), Expect = 2e-43, Method: Composition-based stats.
Identities = 77/107 (71%), Positives = 91/107 (85%)
Query: 1 MLLDRNVKVDVLNRHKQTPLMLAVIHGRTGCVEKLIDAGANILMFDSLRRRTCLHYAAYF 60
+LL+R D+LNRHKQTPLMLA ++GR CV+KL + GANILMFDS+ RRTCLHYAAY+
Sbjct: 64 LLLERFTNPDLLNRHKQTPLMLAAMYGRISCVKKLAEVGANILMFDSVNRRTCLHYAAYY 123
Query: 61 GHLDCLKAILSAAHSTPVADSWGFARFVNIRDGNGATPLHLAARQRR 107
GH +C++AILSAA S+PVA WG+ARFVNIRD GATPLHLAARQRR
Sbjct: 124 GHANCVQAILSAAQSSPVAVHWGYARFVNIRDDKGATPLHLAARQRR 170
>AT2G28840.2 | Symbols: XBAT31 | XB3 ortholog 1 in Arabidopsis
thaliana | chr2:12378672-12380474 FORWARD LENGTH=442
Length = 442
Score = 166 bits (420), Expect = 3e-42, Method: Composition-based stats.
Identities = 75/104 (72%), Positives = 88/104 (84%)
Query: 4 DRNVKVDVLNRHKQTPLMLAVIHGRTGCVEKLIDAGANILMFDSLRRRTCLHYAAYFGHL 63
+R D+LNRHKQTPLMLA ++GR CV+KL + GANILMFDS+ RRTCLHYAAY+GH
Sbjct: 53 ERFTNPDLLNRHKQTPLMLAAMYGRISCVKKLAEVGANILMFDSVNRRTCLHYAAYYGHA 112
Query: 64 DCLKAILSAAHSTPVADSWGFARFVNIRDGNGATPLHLAARQRR 107
+C++AILSAA S+PVA WG+ARFVNIRD GATPLHLAARQRR
Sbjct: 113 NCVQAILSAAQSSPVAVHWGYARFVNIRDDKGATPLHLAARQRR 156
>AT5G57740.1 | Symbols: XBAT32 | XB3 ortholog 2 in Arabidopsis
thaliana | chr5:23394789-23397145 REVERSE LENGTH=508
Length = 508
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 17/119 (14%)
Query: 1 MLLDRNVKVDVLNRHKQTPLMLAVIHGRTGCVEKLIDAGANILMFDSLRRRTCLHYAAYF 60
+L++ V +++ N QT LM A HG V LI GANI D L T LH AA
Sbjct: 69 LLVESGVDINLRNYRGQTALMQACQHGHWEVVLILILFGANIHRSDYLNGGTALHLAALN 128
Query: 61 GHLDCLKAILSAAHSTPVADSWGFAR----------------FVNIRDGNGATPLHLAA 103
GH C++ +LS + V + W + +N G TPLH+AA
Sbjct: 129 GHPRCIRILLS-EYIPSVPNCWSLLKNKKTSVAGFDSSVLHEVINRAADGGITPLHVAA 186
>AT5G07270.1 | Symbols: XBAT33 | XB3 ortholog 3 in Arabidopsis
thaliana | chr5:2280821-2283384 FORWARD LENGTH=513
Length = 513
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 1 MLLDRNVKVDVLNRHKQTPLMLAVIHGRTGCVEKLIDAGANILMFDSLRRRTCLHYAAYF 60
+LL+ V+ N QT LM A +G V+ L+ N+ D L RT LH+AA
Sbjct: 63 LLLENGADVNSRNYCGQTALMQACRYGHWEVVQTLLLFRCNVTRADYLAGRTALHFAAVN 122
Query: 61 GHLDCLKAILS------AAHSTP---------VADSWGFARFVNIRDGNGATPLHLAA 103
GH C++ +L+ +S P ++ ++FVN G T LH+AA
Sbjct: 123 GHARCIRLVLADFLPSDKLNSLPETGVVTAKNKSEQSALSKFVNKAADGGITALHMAA 180