Miyakogusa Predicted Gene

Lj0g3v0206129.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0206129.1 tr|Q0DT18|Q0DT18_ORYSJ Os03g0275300 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os03g02753,69.86,3e-18,Ankyrin repeat,Ankyrin repeat-containing
domain; RING/U-box,NULL; seg,NULL; ZF_RING_2,Zinc finger,
R,CUFF.13226.1
         (239 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G28840.1 | Symbols: XBAT31 | XB3 ortholog 1 in Arabidopsis th...   181   5e-46
AT2G28840.2 | Symbols: XBAT31 | XB3 ortholog 1 in Arabidopsis th...   180   6e-46
AT5G07270.1 | Symbols: XBAT33 | XB3 ortholog 3 in Arabidopsis th...    49   4e-06

>AT2G28840.1 | Symbols: XBAT31 | XB3 ortholog 1 in Arabidopsis
           thaliana | chr2:12378542-12380474 FORWARD LENGTH=456
          Length = 456

 Score =  181 bits (458), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 105/251 (41%), Positives = 128/251 (50%), Gaps = 25/251 (9%)

Query: 1   MAARGGSVDCVRMLLAWGAERLQLDSSGRIPFTVALKRKNRXXXXXXXXXXXXXXVWPSP 60
           +AAR GS+DCVR LLAWGA+RLQ D+SGRIP+ VA+K K+               VWPSP
Sbjct: 201 LAARSGSIDCVRKLLAWGADRLQRDASGRIPYVVAMKHKHGACGALLNPSSAEPLVWPSP 260

Query: 61  LKFISELNQEAKTXXXXXXXXXXXXXXKVLLKHA--DIPTSPLHXXXXXXXXXXXXXXXX 118
           LKFISELN EAK               K +LK     +P+                    
Sbjct: 261 LKFISELNDEAKLLLEQALMEANREREKTILKGTAYSLPSPSF------SDTDDNMSEVS 314

Query: 119 NMDLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPVCPFCRGAILQL 178
           + +LCCICF+QVCTIEVK CGHQMCA CTLALCC  KP+P+T     PVCPFCR  I  L
Sbjct: 315 DTELCCICFEQVCTIEVKDCGHQMCAQCTLALCCHNKPNPTTSTVTPPVCPFCRSTIACL 374

Query: 179 IVP----------------TIKNSSDTEVESNPTKPRXXXXXXXXXXXXXXXXXXAIGSF 222
           +V                  + +    +V S+  + +                   IGSF
Sbjct: 375 VVAQNNNNNNEKSKSLDDVVVVDREAGDVSSSKFR-KHRRSINLGEESSSFMGLSTIGSF 433

Query: 223 GRITGRNSGKI 233
           GRITGR SG+I
Sbjct: 434 GRITGRGSGRI 444


>AT2G28840.2 | Symbols: XBAT31 | XB3 ortholog 1 in Arabidopsis
           thaliana | chr2:12378672-12380474 FORWARD LENGTH=442
          Length = 442

 Score =  180 bits (457), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 105/251 (41%), Positives = 128/251 (50%), Gaps = 25/251 (9%)

Query: 1   MAARGGSVDCVRMLLAWGAERLQLDSSGRIPFTVALKRKNRXXXXXXXXXXXXXXVWPSP 60
           +AAR GS+DCVR LLAWGA+RLQ D+SGRIP+ VA+K K+               VWPSP
Sbjct: 187 LAARSGSIDCVRKLLAWGADRLQRDASGRIPYVVAMKHKHGACGALLNPSSAEPLVWPSP 246

Query: 61  LKFISELNQEAKTXXXXXXXXXXXXXXKVLLKHA--DIPTSPLHXXXXXXXXXXXXXXXX 118
           LKFISELN EAK               K +LK     +P+                    
Sbjct: 247 LKFISELNDEAKLLLEQALMEANREREKTILKGTAYSLPSPSF------SDTDDNMSEVS 300

Query: 119 NMDLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPVCPFCRGAILQL 178
           + +LCCICF+QVCTIEVK CGHQMCA CTLALCC  KP+P+T     PVCPFCR  I  L
Sbjct: 301 DTELCCICFEQVCTIEVKDCGHQMCAQCTLALCCHNKPNPTTSTVTPPVCPFCRSTIACL 360

Query: 179 IVP----------------TIKNSSDTEVESNPTKPRXXXXXXXXXXXXXXXXXXAIGSF 222
           +V                  + +    +V S+  + +                   IGSF
Sbjct: 361 VVAQNNNNNNEKSKSLDDVVVVDREAGDVSSSKFR-KHRRSINLGEESSSFMGLSTIGSF 419

Query: 223 GRITGRNSGKI 233
           GRITGR SG+I
Sbjct: 420 GRITGRGSGRI 430


>AT5G07270.1 | Symbols: XBAT33 | XB3 ortholog 3 in Arabidopsis
           thaliana | chr5:2280821-2283384 FORWARD LENGTH=513
          Length = 513

 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 20/99 (20%)

Query: 120 MDLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPV-CPFCRGAI--- 175
           +D+C +C ++ CT+  + C HQ+C  C L LC        T   PG + CP CR  I   
Sbjct: 309 VDICAVCLERTCTVAAEGCEHQLCVRCALYLCSSSNVPSVTVGPPGSIPCPLCRHGITAF 368

Query: 176 ----------------LQLIVPTIKNSSDTEVESNPTKP 198
                           L    P + ++ DT  +S+PT P
Sbjct: 369 KRLPSSLTREMKLPMSLGFCAPCMLHTGDTTDQSSPTCP 407