Miyakogusa Predicted Gene

Lj0g3v0206119.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0206119.1 Non Chatacterized Hit- tr|I1MDG0|I1MDG0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,45.87,0.00000000002,seg,NULL,CUFF.13225.1
         (207 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G02440.1 | Symbols:  | unknown protein; Has 71 Blast hits to ...    66   1e-11

>AT5G02440.1 | Symbols:  | unknown protein; Has 71 Blast hits to 71
           proteins in 12 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr5:531066-532725 FORWARD LENGTH=176
          Length = 176

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 84/168 (50%), Gaps = 30/168 (17%)

Query: 4   QQEEGWPLGLRLSNARIGLLRNGEF---------SGSISFSTLLTDSPTHYSIDSSSDLD 54
            QEEGWPLGLR  NARIG L  G           +GSISFS+LL+ S    S  SSSDLD
Sbjct: 3   HQEEGWPLGLRPVNARIGGLTRGTHHHHHHEQVSAGSISFSSLLSPS---PSSQSSSDLD 59

Query: 55  TQSTGSFFREKXXXXXXXXXXXXXXXXXXXXXXXXEVEP-SKDNKKNHKLM----KPWLF 109
           +QS GSFFR++                          +  +  N ++HK +    KPW+F
Sbjct: 60  SQSMGSFFRDRSYTLGNLIGISSFLELSRRSNRTRNDQTGAARNHQHHKNLKTYYKPWIF 119

Query: 110 SLCSKLTTDAVI-------------ENDAPSLGQYLMAERRAASAYRR 144
           S+CSKL+T+A +              N+  SLG +L+ ERRA  +  R
Sbjct: 120 SICSKLSTNATVISHNRIINEENDGRNNVQSLGHFLIMERRAVGSTIR 167