Miyakogusa Predicted Gene

Lj0g3v0205939.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0205939.1 tr|Q9C8Z3|Q9C8Z3_ARATH Agenet domain-containing
protein OS=Arabidopsis thaliana GN=F5E6.15 PE=4
SV=1,39.73,9e-19,Tudor-like domain present in plant
sequences,Tudor-like, plant; seg,NULL; Agenet,Agenet-like
domain,CUFF.13160.1
         (164 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G06520.1 | Symbols:  | agenet domain-containing protein | chr...    88   2e-18
AT1G09320.1 | Symbols:  | agenet domain-containing protein | chr...    54   5e-08
AT1G06340.1 | Symbols:  | Plant Tudor-like protein | chr1:193358...    53   1e-07

>AT3G06520.1 | Symbols:  | agenet domain-containing protein |
           chr3:2020284-2021955 FORWARD LENGTH=466
          Length = 466

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 15/149 (10%)

Query: 23  SYFPATVLRPPSKNNNMVFVEYQAPTKS-----RNREYVNVASVRPKLPYELNPWFKVGD 77
           +YFPA+V+  PS    +V+VE+++ T       R +EYV    +RP  P ELN  FK  D
Sbjct: 24  AYFPASVVSAPSVRKKLVWVEHESLTVGGSVSVRMKEYVTPTRLRPSPPRELNRRFKADD 83

Query: 78  SVDAFRPNVTAFSWCPATVSDILENSTYRVDFRGHS---AAVDHCSLRLHRDWVNGNWVX 134
            VD FR   +   W    V+ +LE+S Y V+F+G +     VD  +LRLHR+W++G WV 
Sbjct: 84  EVDVFRD--SEGCWVRGNVTTVLEDSRYIVEFKGENRPEIEVDQFNLRLHREWLDGGWV- 140

Query: 135 XXXXXXXXXXXXXTVTRSEKIRIKIKCSR 163
                        + + +++I++KIK  R
Sbjct: 141 ----PSLLQQSNFSESTAQRIKLKIKIKR 165


>AT1G09320.1 | Symbols:  | agenet domain-containing protein |
           chr1:3010270-3012228 REVERSE LENGTH=517
          Length = 517

 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 17/138 (12%)

Query: 5   FNKGEGVEVIKQNENDEYSYFPATVLRPPSKNNNMVFVEYQ----APTKSRNREYVNVAS 60
           F+ G  +EV  + E  E S+F A ++    +  +   VEY        K   RE VNV+ 
Sbjct: 380 FSIGTPIEVSPEEEGFEDSWFLAKLIE--YRGKDKCLVEYDNLKAEDGKEPLREEVNVSR 437

Query: 61  VRPKLPYE---LNPWFKVGDSVDAFRPNVTAFSWCPATVSDILENSTYRVDFRGHSAAVD 117
           +RP LP E   ++P F+  D V+A   +     W    +  +L  S+Y V F+     + 
Sbjct: 438 IRP-LPLESVMVSP-FERHDKVNALYND----GWWVGVIRKVLAKSSYLVLFKNTQELLK 491

Query: 118 --HCSLRLHRDWVNGNWV 133
             H  LRLH++W++G W+
Sbjct: 492 FHHSQLRLHQEWIDGKWI 509



 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 12/136 (8%)

Query: 3   SIFNKGEGVEVIKQNENDEYSYFPATVLRPPSKNNNMVFVEYQAPTKSRN----REYVNV 58
            +F+ G  VEV    E  +  +F A V+ P  ++     VEY+   +       +E  + 
Sbjct: 219 QMFSSGTVVEVSSDEEGFQGCWFAAKVVEPVGEDK--FLVEYRDLREKDGIEPLKEETDF 276

Query: 59  ASVRPKLPYELNPWFKVGDSVDAFRPNVTAFSWCPATVSDILENSTYRVDFRGHSAAV-- 116
             +RP  P + +  F VGD ++AF  +     W    V D +++ T  + FR     +  
Sbjct: 277 LHIRPPPPRDEDIDFAVGDKINAFYND----GWWVGVVIDGMKHGTVGIYFRQSQEKMRF 332

Query: 117 DHCSLRLHRDWVNGNW 132
               LRLH+DWV+G W
Sbjct: 333 GRQGLRLHKDWVDGTW 348


>AT1G06340.1 | Symbols:  | Plant Tudor-like protein |
           chr1:1933583-1933987 REVERSE LENGTH=134
          Length = 134

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 11/135 (8%)

Query: 5   FNKGEGVEVIKQNENDEYSYFPATVLR--PPSKNNNMVFVEYQAPTKSRNR--EYVNVAS 60
           F KG+ VEV  + +    SYF ATV+   P      + +    + T    R  E ++   
Sbjct: 3   FVKGDQVEVCSKEDGFLGSYFGATVVSKTPEGSYYKIKYKNLVSDTDQSKRLVEVISADE 62

Query: 61  VRPKLPYELNPWFKVGDSVDAFRPNVTAFSWCPATVSDILENSTYRVDFRGHSAAVDH-- 118
           +RP  P  L+   + GD VDAF  +     W    V+ +  N  Y V F      +++  
Sbjct: 63  LRPMPPKSLHVLIRCGDKVDAFDKD----GWWVGEVTAVRRN-IYSVYFSTTDEELEYPL 117

Query: 119 CSLRLHRDWVNGNWV 133
            SLR H +WVNG+WV
Sbjct: 118 YSLRKHHEWVNGSWV 132