Miyakogusa Predicted Gene

Lj0g3v0205299.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0205299.1 Non Chatacterized Hit- tr|I1MD85|I1MD85_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22000 PE,86.07,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; OB_NTP_bind,Domain
of unknown function DU,CUFF.13110.1
         (282 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein | c...   392   e-109
AT3G26560.1 | Symbols:  | ATP-dependent RNA helicase, putative |...   179   2e-45
AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein | chr1...   154   6e-38
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prote...   154   6e-38
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protei...   153   1e-37
AT4G18465.1 | Symbols:  | RNA helicase family protein | chr4:101...   140   7e-34
AT3G62310.1 | Symbols:  | RNA helicase family protein | chr3:230...   133   1e-31
AT2G47250.1 | Symbols:  | RNA helicase family protein | chr2:193...   132   2e-31
AT5G14900.1 | Symbols:  | helicase associated (HA2) domain-conta...   120   8e-28
AT1G26370.1 | Symbols:  | RNA helicase family protein | chr1:912...   114   6e-26
AT1G27900.1 | Symbols:  | RNA helicase family protein | chr1:971...    89   5e-18
AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protei...    79   5e-15
AT2G01130.1 | Symbols:  | DEA(D/H)-box RNA helicase family prote...    72   6e-13
AT1G48650.1 | Symbols:  | DEA(D/H)-box RNA helicase family prote...    67   2e-11
AT1G48650.2 | Symbols:  | DEA(D/H)-box RNA helicase family prote...    67   2e-11
AT2G35920.1 | Symbols:  | RNA helicase family protein | chr2:150...    66   2e-11
AT5G04895.1 | Symbols:  | DEA(D/H)-box RNA helicase family prote...    61   1e-09
AT5G10370.1 | Symbols:  | helicase domain-containing protein / I...    60   2e-09
AT4G01020.1 | Symbols:  | helicase domain-containing protein / I...    58   7e-09
AT1G58060.1 | Symbols:  | RNA helicase family protein | chr1:214...    52   4e-07

>AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein |
            chr5:4122747-4128660 FORWARD LENGTH=1255
          Length = 1255

 Score =  392 bits (1007), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/263 (72%), Positives = 215/263 (81%)

Query: 1    MVDFXXXXXXXXXXXXGEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE 60
            MV+F            GE+L C++EVLTIVSMLSVPSVFFRPK+RAEESDAARE+F VPE
Sbjct: 977  MVEFPLDPPLAKMLLMGERLDCIDEVLTIVSMLSVPSVFFRPKERAEESDAAREKFFVPE 1036

Query: 61   SDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPD 120
            SDHLTL NVYQQWK+HDYRGDWCNDH+L VKGLRKAREVRSQLLDILK+L I L +C PD
Sbjct: 1037 SDHLTLLNVYQQWKEHDYRGDWCNDHYLQVKGLRKAREVRSQLLDILKQLKIELRSCGPD 1096

Query: 121  TDIVRKAVCSAYFHNSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLT 180
             DIVRKA+CSAYFHNSAR KGV EY+NCR+GMPCHLHPSSALYG+G TP+YVVYHEL+LT
Sbjct: 1097 WDIVRKAICSAYFHNSARLKGVGEYVNCRTGMPCHLHPSSALYGLGYTPDYVVYHELILT 1156

Query: 181  SKEYMQCTTAVEPQWLAELGPMFFSIKESDTSLLEHKKKQNQEKTSMEEEMENLEKVQAX 240
            +KEYMQC T+VEP WLAELGPMFFS+K+SDTS+LEHKKKQ +EK+ MEEEME L + Q  
Sbjct: 1157 TKEYMQCATSVEPHWLAELGPMFFSVKDSDTSMLEHKKKQKEEKSGMEEEMEKLRRDQVE 1216

Query: 241  XXXXXXXXXXXXMAQHQQQISMP 263
                         A+ QQQIS P
Sbjct: 1217 SELRSKERERKKRAKQQQQISGP 1239


>AT3G26560.1 | Symbols:  | ATP-dependent RNA helicase, putative |
            chr3:9750122-9753719 REVERSE LENGTH=1168
          Length = 1168

 Score =  179 bits (454), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 130/203 (64%), Gaps = 4/203 (1%)

Query: 20   LGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDYR 79
            LGC +E+LT+++M+   ++F+RP+++  ++D  R +F  PE DHLTL  VY+ WK  ++ 
Sbjct: 949  LGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFS 1008

Query: 80   GDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHNSARS 139
            G WC ++F+  + LR+A++VR QLL I+ K  + + T   +   +RKA+ + +F + AR 
Sbjct: 1009 GPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGKNFTKIRKAITAGFFFHGARK 1068

Query: 140  KGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQWLAEL 199
                 Y       P ++HPSSAL+     P++V+YH+LV+T+KEYM+  T ++P+WL EL
Sbjct: 1069 DPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYHDLVMTTKEYMREVTVIDPKWLVEL 1126

Query: 200  GPMFFSIKESDTSLLEHKKKQNQ 222
             P FF +  SD + +  +K+Q +
Sbjct: 1127 APRFFKV--SDPTKMSKRKRQER 1147


>AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein |
            chr1:11742356-11749286 REVERSE LENGTH=1034
          Length = 1034

 Score =  154 bits (389), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 122/193 (63%), Gaps = 4/193 (2%)

Query: 18   EKLGCLEEVLTIVSMLSVP-SVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
            +K  C +E+++I +MLS+  S+F+RPKD+   +D AR  F      DH+ L  VY  WK+
Sbjct: 826  DKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKE 885

Query: 76   HDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHN 135
             ++   WC ++++ V+ +++AR++R QL  +L+++ I +++   + D VRK++ + +F +
Sbjct: 886  TNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPH 945

Query: 136  SARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQW 195
            +A+ +    Y   +     H+HP+S L      P +VVYHELVLTSKEYM+  T ++P+W
Sbjct: 946  TAKLQKNGSYRTVKHPQTVHIHPNSGL--SQVLPRWVVYHELVLTSKEYMRQVTELKPEW 1003

Query: 196  LAELGPMFFSIKE 208
            L EL P ++ +K+
Sbjct: 1004 LIELAPHYYQLKD 1016


>AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein |
            chr1:11742356-11749286 REVERSE LENGTH=1044
          Length = 1044

 Score =  154 bits (389), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 122/193 (63%), Gaps = 4/193 (2%)

Query: 18   EKLGCLEEVLTIVSMLSVP-SVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
            +K  C +E+++I +MLS+  S+F+RPKD+   +D AR  F      DH+ L  VY  WK+
Sbjct: 836  DKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKE 895

Query: 76   HDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHN 135
             ++   WC ++++ V+ +++AR++R QL  +L+++ I +++   + D VRK++ + +F +
Sbjct: 896  TNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPH 955

Query: 136  SARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQW 195
            +A+ +    Y   +     H+HP+S L      P +VVYHELVLTSKEYM+  T ++P+W
Sbjct: 956  TAKLQKNGSYRTVKHPQTVHIHPNSGL--SQVLPRWVVYHELVLTSKEYMRQVTELKPEW 1013

Query: 196  LAELGPMFFSIKE 208
            L EL P ++ +K+
Sbjct: 1014 LIELAPHYYQLKD 1026


>AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein |
            chr2:14872728-14879615 FORWARD LENGTH=1044
          Length = 1044

 Score =  153 bits (387), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 123/193 (63%), Gaps = 4/193 (2%)

Query: 18   EKLGCLEEVLTIVSMLSV-PSVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
            +K  C +E+++I +MLS+ PS+F+RPKD+   +D A + F V    DH+    +Y  WK+
Sbjct: 836  DKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKE 895

Query: 76   HDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHN 135
             +Y   WC ++++ V+ +++AR++R QL  +L+++ I +++   + D +RK++ + +F +
Sbjct: 896  TNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIRKSIVAGFFPH 955

Query: 136  SARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQW 195
            +A+ +    Y   +     H+HP+S L      P +VVYH+LVLTSKEYM+  T ++P+W
Sbjct: 956  TAKLQKNGSYRTVKHPQTVHIHPASGL--SQVLPRWVVYHQLVLTSKEYMRQVTELKPEW 1013

Query: 196  LAELGPMFFSIKE 208
            L E+ P ++ +K+
Sbjct: 1014 LIEIAPHYYQLKD 1026


>AT4G18465.1 | Symbols:  | RNA helicase family protein |
           chr4:10197056-10201611 FORWARD LENGTH=695
          Length = 695

 Score =  140 bits (354), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 114/199 (57%), Gaps = 8/199 (4%)

Query: 19  KLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDY 78
           +LGC  E++TI ++LSV SV+   +   +E D A+ RF+  E DH+T  NVY+ + +   
Sbjct: 501 ELGCSHEIITIAAVLSVQSVWIIARGVQKEQDEAKLRFAAAEGDHVTFLNVYKGFLESKK 560

Query: 79  RGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHNSAR 138
              WC  +FL+ + ++K  E+R QL  I ++L I L +C  D + VRKAV + +F N+ R
Sbjct: 561 PTQWCYKNFLNYQSMKKVVEIRDQLKRIARRLGITLKSCDGDMEAVRKAVTAGFFANACR 620

Query: 139 ----SKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQ 194
               S GV  Y   R     ++HPSS L+ +   P++VVY  +V T ++YM+    + P 
Sbjct: 621 LEPHSNGV--YKTIRGSEEVYIHPSSVLFRV--NPKWVVYQSIVSTERQYMRNVVTINPS 676

Query: 195 WLAELGPMFFSIKESDTSL 213
           WL E+ P F+  +++  S 
Sbjct: 677 WLTEVAPHFYQNRQNAMSF 695


>AT3G62310.1 | Symbols:  | RNA helicase family protein |
           chr3:23057516-23060561 REVERSE LENGTH=726
          Length = 726

 Score =  133 bits (335), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 113/192 (58%), Gaps = 7/192 (3%)

Query: 19  KLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDY 78
           +  C  E+L++ +MLSVP+ F RP++  + +D A+ RF   E DHLTL NVY  +KQ++ 
Sbjct: 507 EFNCSNEILSVSAMLSVPNCFIRPREAQKAADEAKARFGHIEGDHLTLLNVYHAFKQNNE 566

Query: 79  RGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPL-TTCFPDTDI---VRKAVCSAYFH 134
             +WC ++F++ + ++ A  VR QL+ I+ + N+ + +T F   D    +RKA+ + YF 
Sbjct: 567 DPNWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFM 626

Query: 135 NSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQ 194
             A  +    Y+  +     HLHPS+ L      PE+V+Y+E VLTS+ +++  T +  +
Sbjct: 627 QVAHLERTGHYLTVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDIRGE 683

Query: 195 WLAELGPMFFSI 206
           WL ++   ++ +
Sbjct: 684 WLVDVASHYYDL 695


>AT2G47250.1 | Symbols:  | RNA helicase family protein |
           chr2:19399923-19402981 REVERSE LENGTH=729
          Length = 729

 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 124/216 (57%), Gaps = 12/216 (5%)

Query: 19  KLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDY 78
           +  C  E+L++ +MLSVP+ F RP++  + +D A+ RF   + DHLTL NVY  +KQ++ 
Sbjct: 511 EFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNE 570

Query: 79  RGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPL-TTCFPDTDI---VRKAVCSAYFH 134
             +WC ++F++ + ++ A  VR QL+ I+ + N+ + +T F   D    +RKA+ + YF 
Sbjct: 571 DPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFM 630

Query: 135 NSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQ 194
             A  +    Y+  +     HLHPS+ L      PE+V+Y+E VLT++ +++  T +  +
Sbjct: 631 QVAHLERTGHYLTVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTTRNFIRTVTDIRGE 687

Query: 195 WLAELGPMFFSIK-----ESDTSLLEHKKKQNQEKT 225
           WL ++   ++ +      E+  +L +  KK+ +EK 
Sbjct: 688 WLVDVAQHYYDLSNFPNCEAKRALEKLYKKREREKN 723


>AT5G14900.1 | Symbols:  | helicase associated (HA2)
           domain-containing protein | chr5:4822676-4823581 REVERSE
           LENGTH=301
          Length = 301

 Score =  120 bits (302), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 121/221 (54%), Gaps = 14/221 (6%)

Query: 19  KLGCLEEVLTIVSMLSVPSVFFRPKDRAEES-DAARERFSVPESDHLTLYNVYQQWKQHD 77
           +  C  E+L+I +MLSVP+ F RP+  A+++ D A+  F+  + DHLTL N++  + Q++
Sbjct: 77  QFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHIDGDHLTLLNLFHAFLQNN 136

Query: 78  YRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDI------VRKAVCSA 131
              +WC   F++ + ++ A  VR QL+ I+ +  I L  C PD +       +RKA+ + 
Sbjct: 137 QDPNWCCTKFINYRAMKSAVSVREQLVRIMLRFQIKL--CSPDFNSRDYYVNIRKALLAG 194

Query: 132 YFHNSARSKGVREYINCR--SGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTT 189
           YF   A  +    Y+  R       HLHPS+ L      PE+VVY+E V TS+ +++  T
Sbjct: 195 YFMQVAHLERTGHYLTFRDKDDQVVHLHPSNCL---DHKPEWVVYNEYVFTSRNFIRTVT 251

Query: 190 AVEPQWLAELGPMFFSIKESDTSLLEHKKKQNQEKTSMEEE 230
            +  +WL ++ P ++ +    +S  +   +++ +K  + EE
Sbjct: 252 HIRGEWLVDVAPHYYKLANFPSSEAKRVLERHYKKRKLSEE 292


>AT1G26370.1 | Symbols:  | RNA helicase family protein |
           chr1:9122030-9125368 REVERSE LENGTH=717
          Length = 717

 Score =  114 bits (286), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 117/204 (57%), Gaps = 16/204 (7%)

Query: 19  KLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQW----- 73
           +  CLEE+L  V++LSV S+F+ P+++ EE+  ++  F+  E DHLT  +VY++      
Sbjct: 516 QFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYLSVYRESDEFLE 575

Query: 74  -KQHDYRGD--------WCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIV 124
            ++    G+        WC +++++ + L+ AR++  Q+ + ++++   +++C  D    
Sbjct: 576 KRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCGNDMLAF 635

Query: 125 RKAVCSAYFHNSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEY 184
           R+ + +++F  +A+ +    Y    SG   H+HP+S L+     PE V+++EL+ TSK+Y
Sbjct: 636 RRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSVLF--RAKPECVIFNELMQTSKKY 693

Query: 185 MQCTTAVEPQWLAELGPMFFSIKE 208
           ++  T ++  WL+EL P  F   E
Sbjct: 694 IKNLTIIDSLWLSELAPHHFQTAE 717


>AT1G27900.1 | Symbols:  | RNA helicase family protein |
           chr1:9715615-9720346 REVERSE LENGTH=700
          Length = 700

 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 47/251 (18%)

Query: 21  GCLEEVLTIVSMLSVPSVFF----RPKDRAEESDAARERFSVPES----DHLTLYNVYQQ 72
           GCL + LT+V+MLS  +       +P ++  + D   E  ++P      DH+ L  +++ 
Sbjct: 443 GCLSQALTVVAMLSAETTLLPARSKPSEKKRKHD---EDSNLPNGSGYGDHIQLLQIFES 499

Query: 73  WKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPL---------TTCFPDTDI 123
           W + +Y   WC ++ + V+G+   ++VR QL  I++K++            ++   D   
Sbjct: 500 WDRTNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRK 559

Query: 124 VRKAVCSAYFHNSA----RSKGVREYINCRSGMPCHLHPSSALYG--MGCTPEYVVYHEL 177
           +RKA+C    +  A    R  G R  ++ +S +   +HPSS L     G  P YVVYHEL
Sbjct: 560 LRKALCVGNANQIAERMLRHNGYRT-LSFQSQL-VQVHPSSVLSADNDGMMPNYVVYHEL 617

Query: 178 VLTSKEYMQCTTAVEPQWLAEL--------------GPM-FFSIKESDTSLLEHKKKQNQ 222
           + T++ +M+   AV+  W+A +              GP   F + E  T L     K N 
Sbjct: 618 ISTTRPFMRNVCAVDMAWVAPIKRKIEKLNVRKLSGGPAPSFKVPEEKTEL----SKNNA 673

Query: 223 EKTSMEEEMEN 233
           E  ++ E +E+
Sbjct: 674 ETPAVSENVES 684


>AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protein |
            chr1:12099738-12104108 REVERSE LENGTH=1237
          Length = 1237

 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 32/188 (17%)

Query: 41   RPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVR 100
            R KDR E+  AAR+RFS P SD LT+      ++  +    +C  + LH+K + +  +++
Sbjct: 895  RKKDRKEKIKAARDRFSNPSSDALTVAYALHSFEVSENGMGFCEANGLHLKTMDEMSKLK 954

Query: 101  SQLL------------------------DILKKLNIPLTTCFP------DTDIVRKAVCS 130
             QLL                        D+ K   I  +T         + +++ +A+C+
Sbjct: 955  DQLLRLVFNCCKPSETEDSFSWTHGTIQDVEKSWRITTSTSSKTPLLQNEEELLGEAICA 1014

Query: 131  AYFHNSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTA 190
             +    AR     EY  C    P  LH  S+L  +   PE +VY EL+LT++ YM   T 
Sbjct: 1015 GWADRVARKTRATEYQACAVQEPVFLHRWSSL--INSAPELLVYSELLLTNRPYMHGATR 1072

Query: 191  VEPQWLAE 198
            V P+WL +
Sbjct: 1073 VRPEWLVK 1080


>AT2G01130.1 | Symbols:  | DEA(D/H)-box RNA helicase family protein
           | chr2:88847-94635 REVERSE LENGTH=1113
          Length = 1113

 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 13/128 (10%)

Query: 17  GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQH 76
           G  LGCL+ +LT+ + LSV   F  P+D+ + ++AA+ +FS   SDHL L   Y+ WK+ 
Sbjct: 720 GAILGCLDPILTVAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKA 779

Query: 77  DYRG---DWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFP--------DTDIVR 125
           +      D+C  +FL ++ LR    +R +   +LK  +  L    P        D ++ R
Sbjct: 780 EEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLK--DTGLIDGNPSICNSEGNDANLTR 837

Query: 126 KAVCSAYF 133
             +C   +
Sbjct: 838 AVICYGMY 845


>AT1G48650.1 | Symbols:  | DEA(D/H)-box RNA helicase family protein
           | chr1:17989670-17995169 REVERSE LENGTH=1197
          Length = 1197

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 24/202 (11%)

Query: 17  GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWK- 74
           G    CL+ V+T+V+ LSV   F  P D+ + ++ AR +FS  + SDHLTL   Y  WK 
Sbjct: 800 GAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKD 859

Query: 75  -QHDYRG-DWCNDHFLHVKGLRKAREVRSQLLDILKKLNI--PLTTCFP---DTDIVRKA 127
            +  + G D+C  +FL  + L+    +R Q  ++LK+ ++   +  C     D  +VR  
Sbjct: 860 AERTHSGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAI 919

Query: 128 VCSAYFHNSARSKGVREYINCRSGMPCH--------LHPSSALYGMGCTP-EYVVYHELV 178
           +C+  F       GV   +N    +           L+ SS    +   P  ++V+++ V
Sbjct: 920 ICAGMF------PGVCSVVNKEKSITLKTMEDGQVLLYSSSVNGNVPMIPFPWLVFNDKV 973

Query: 179 LTSKEYMQCTTAVEPQWLAELG 200
             +  +++ +TAV    L   G
Sbjct: 974 KVNSVFLRDSTAVSDSVLLLFG 995


>AT1G48650.2 | Symbols:  | DEA(D/H)-box RNA helicase family protein
           | chr1:17989517-17995169 REVERSE LENGTH=1206
          Length = 1206

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 24/202 (11%)

Query: 17  GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWK- 74
           G    CL+ V+T+V+ LSV   F  P D+ + ++ AR +FS  + SDHLTL   Y  WK 
Sbjct: 800 GAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKD 859

Query: 75  -QHDYRG-DWCNDHFLHVKGLRKAREVRSQLLDILKKLNI--PLTTCFP---DTDIVRKA 127
            +  + G D+C  +FL  + L+    +R Q  ++LK+ ++   +  C     D  +VR  
Sbjct: 860 AERTHSGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAI 919

Query: 128 VCSAYFHNSARSKGVREYINCRSGMPCH--------LHPSSALYGMGCTP-EYVVYHELV 178
           +C+  F       GV   +N    +           L+ SS    +   P  ++V+++ V
Sbjct: 920 ICAGMF------PGVCSVVNKEKSITLKTMEDGQVLLYSSSVNGNVPMIPFPWLVFNDKV 973

Query: 179 LTSKEYMQCTTAVEPQWLAELG 200
             +  +++ +TAV    L   G
Sbjct: 974 KVNSVFLRDSTAVSDSVLLLFG 995


>AT2G35920.1 | Symbols:  | RNA helicase family protein |
           chr2:15075674-15080506 FORWARD LENGTH=995
          Length = 995

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 18/200 (9%)

Query: 17  GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
           G    C+   LTI + L+  S F  P +R EE+D A+  F+    SDH+ L   Y+ ++ 
Sbjct: 725 GAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAKRYFAGDSCSDHIALLKAYEGYRD 784

Query: 76  HDYRG---DWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFP--------DTDIV 124
               G   D+C  +FL    LR   ++R+Q LD+L  +   +    P        D +++
Sbjct: 785 AKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGF-VDKSKPNAYNQYSYDMEMI 843

Query: 125 RKAVCSAYFHNSARSK--GVREYINCRSGMPCHLHPSS--ALYGMGCTPEYVVYHELVLT 180
              +C+  + N  + K  G R     +      +HP S  A   +   P Y+VY E V T
Sbjct: 844 SAVLCAGLYPNVVQCKRRGKRTAFYTKELGKVDIHPGSVNARVNLFSLP-YLVYSEKVKT 902

Query: 181 SKEYMQCTTAVEPQWLAELG 200
           +  Y++ +T +    L   G
Sbjct: 903 TSVYIRDSTNISDYALLMFG 922


>AT5G04895.1 | Symbols:  | DEA(D/H)-box RNA helicase family protein
           | chr5:1428796-1434516 FORWARD LENGTH=1161
          Length = 1161

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 16/134 (11%)

Query: 17  GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
           G    C + +LTIVS LSV   F  P+D+ + + +A+ RFS  + SDH+ L   ++ WK 
Sbjct: 761 GAIFRCFDPILTIVSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYSDHMALVRAFEGWKD 820

Query: 76  HDYRG---DWCNDHFLHVKGLRKAREVRSQLLDILKK---------LNIPLTTCFPDTDI 123
            +  G   ++C  +FL  + L+    +R Q   ILK+         LN  L+    +  +
Sbjct: 821 AEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLSH---NQSL 877

Query: 124 VRKAVCSAYFHNSA 137
           VR  +CS  F   A
Sbjct: 878 VRAVICSGLFPGIA 891


>AT5G10370.1 | Symbols:  | helicase domain-containing protein / IBR
           domain-containing protein / zinc finger protein-related
           | chr5:3261245-3267188 FORWARD LENGTH=1775
          Length = 1775

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 28/224 (12%)

Query: 20  LGCL------EEVLTIVSMLSVPSVFFRPK--DRAEESDAARERFSVPESDHLTLYNVYQ 71
           LGC       E ++    M +  S+F R    D   ++D  + +F     D  TL +VY+
Sbjct: 737 LGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNQNGDLFTLLSVYK 796

Query: 72  QWKQ--HDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDI------ 123
           +W     + R  WC ++ L+ K +R+  +   +L   +++    LT   P   +      
Sbjct: 797 EWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEICIER---ELTLVSPSYWVWNPNEG 853

Query: 124 ------VRKAVCSAYFHNSARSKGVRE--YINCRSGMPCHLHPSSALYGMGCTPEYVVYH 175
                 ++  + ++   N A   G  +  Y    +G    LHPS +L   G  P +VV+ 
Sbjct: 854 TKHDKHLKMVILASLAENVAMYTGYNQLGYEVALTGQQVQLHPSCSLLAFGQKPSWVVFG 913

Query: 176 ELVLTSKEYMQCTTAVEPQWLAELG-PMFFSIKESDTSLLEHKK 218
           EL+    +Y+ C TA + + L  L  P  F + + D   L  KK
Sbjct: 914 ELLSIVDQYLVCVTACDFEALYMLDPPPPFDVSQMDERRLRIKK 957


>AT4G01020.1 | Symbols:  | helicase domain-containing protein / IBR
           domain-containing protein / zinc finger protein-related
           | chr4:439086-445043 FORWARD LENGTH=1787
          Length = 1787

 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 27/206 (13%)

Query: 20  LGCL------EEVLTIVSMLSVPSVFFRPK--DRAEESDAARERFSVPESDHLTLYNVYQ 71
           LGC       E ++    M +  S+F R    D   ++D  + +F     D  TL +VY+
Sbjct: 734 LGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYK 793

Query: 72  QWKQ--HDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPD--------- 120
           +W     D R  WC ++ L+ K +R+  +   +L   +++    LT   P          
Sbjct: 794 EWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEICIER---ELTLVSPSYWVWNPNEG 850

Query: 121 ---TDIVRKAVCSAYFHNSARSKGVRE--YINCRSGMPCHLHPSSALYGMGCTPEYVVYH 175
                 ++  + ++   N A   G  +  Y    +     LHPS +L   G  P +VV+ 
Sbjct: 851 TKHDKYLKMVILASLAENVAMYTGYDQLGYEVALTSQQVQLHPSCSLLAFGQKPSWVVFG 910

Query: 176 ELVLTSKEYMQCTTAVEPQWLAELGP 201
           EL+    +Y+ C TA + + L  L P
Sbjct: 911 ELLSIVDQYLVCVTAFDFEALYMLDP 936


>AT1G58060.1 | Symbols:  | RNA helicase family protein |
            chr1:21489480-21501775 REVERSE LENGTH=1459
          Length = 1459

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 91/240 (37%), Gaps = 63/240 (26%)

Query: 17   GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERF-------------SVPESDH 63
            G   GCL  +L+I + LS  S F  PKD  +  D  +                +  +SDH
Sbjct: 1138 GGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQSDH 1197

Query: 64   LTLYNVYQQW-KQHDYRG-----DWCNDHFLHVKGLRKAREVRSQ---LLDILKKLNIPL 114
            L +   Y +W K    RG      +C   FL    +R  R++R Q   LL  +  +N+P 
Sbjct: 1198 LLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGLINLPK 1257

Query: 115  TTCFPDT-----------------------DIVRKAVCSAYFHN-SARSKGVRE------ 144
            T  F                          ++V+  +C+  + N +A  KG+ E      
Sbjct: 1258 TGEFSGRKKENLDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITETTFNSL 1317

Query: 145  ---------YINCRSG-MPCHLHPSSALYGMGCTPE-YVVYHELVLTSKEYMQCTTAVEP 193
                     Y     G    H+HPSS           ++V+ E V T+K Y++ TT V P
Sbjct: 1318 TKQGNQTKSYSAWYDGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRDTTIVSP 1377