Miyakogusa Predicted Gene
- Lj0g3v0205299.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0205299.1 Non Chatacterized Hit- tr|I1MD85|I1MD85_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22000 PE,86.07,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; OB_NTP_bind,Domain
of unknown function DU,CUFF.13110.1
(282 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein | c... 392 e-109
AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |... 179 2e-45
AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein | chr1... 154 6e-38
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prote... 154 6e-38
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protei... 153 1e-37
AT4G18465.1 | Symbols: | RNA helicase family protein | chr4:101... 140 7e-34
AT3G62310.1 | Symbols: | RNA helicase family protein | chr3:230... 133 1e-31
AT2G47250.1 | Symbols: | RNA helicase family protein | chr2:193... 132 2e-31
AT5G14900.1 | Symbols: | helicase associated (HA2) domain-conta... 120 8e-28
AT1G26370.1 | Symbols: | RNA helicase family protein | chr1:912... 114 6e-26
AT1G27900.1 | Symbols: | RNA helicase family protein | chr1:971... 89 5e-18
AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protei... 79 5e-15
AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 72 6e-13
AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 67 2e-11
AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 67 2e-11
AT2G35920.1 | Symbols: | RNA helicase family protein | chr2:150... 66 2e-11
AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 61 1e-09
AT5G10370.1 | Symbols: | helicase domain-containing protein / I... 60 2e-09
AT4G01020.1 | Symbols: | helicase domain-containing protein / I... 58 7e-09
AT1G58060.1 | Symbols: | RNA helicase family protein | chr1:214... 52 4e-07
>AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein |
chr5:4122747-4128660 FORWARD LENGTH=1255
Length = 1255
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/263 (72%), Positives = 215/263 (81%)
Query: 1 MVDFXXXXXXXXXXXXGEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE 60
MV+F GE+L C++EVLTIVSMLSVPSVFFRPK+RAEESDAARE+F VPE
Sbjct: 977 MVEFPLDPPLAKMLLMGERLDCIDEVLTIVSMLSVPSVFFRPKERAEESDAAREKFFVPE 1036
Query: 61 SDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPD 120
SDHLTL NVYQQWK+HDYRGDWCNDH+L VKGLRKAREVRSQLLDILK+L I L +C PD
Sbjct: 1037 SDHLTLLNVYQQWKEHDYRGDWCNDHYLQVKGLRKAREVRSQLLDILKQLKIELRSCGPD 1096
Query: 121 TDIVRKAVCSAYFHNSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLT 180
DIVRKA+CSAYFHNSAR KGV EY+NCR+GMPCHLHPSSALYG+G TP+YVVYHEL+LT
Sbjct: 1097 WDIVRKAICSAYFHNSARLKGVGEYVNCRTGMPCHLHPSSALYGLGYTPDYVVYHELILT 1156
Query: 181 SKEYMQCTTAVEPQWLAELGPMFFSIKESDTSLLEHKKKQNQEKTSMEEEMENLEKVQAX 240
+KEYMQC T+VEP WLAELGPMFFS+K+SDTS+LEHKKKQ +EK+ MEEEME L + Q
Sbjct: 1157 TKEYMQCATSVEPHWLAELGPMFFSVKDSDTSMLEHKKKQKEEKSGMEEEMEKLRRDQVE 1216
Query: 241 XXXXXXXXXXXXMAQHQQQISMP 263
A+ QQQIS P
Sbjct: 1217 SELRSKERERKKRAKQQQQISGP 1239
>AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |
chr3:9750122-9753719 REVERSE LENGTH=1168
Length = 1168
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 130/203 (64%), Gaps = 4/203 (1%)
Query: 20 LGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDYR 79
LGC +E+LT+++M+ ++F+RP+++ ++D R +F PE DHLTL VY+ WK ++
Sbjct: 949 LGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFS 1008
Query: 80 GDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHNSARS 139
G WC ++F+ + LR+A++VR QLL I+ K + + T + +RKA+ + +F + AR
Sbjct: 1009 GPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGKNFTKIRKAITAGFFFHGARK 1068
Query: 140 KGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQWLAEL 199
Y P ++HPSSAL+ P++V+YH+LV+T+KEYM+ T ++P+WL EL
Sbjct: 1069 DPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYHDLVMTTKEYMREVTVIDPKWLVEL 1126
Query: 200 GPMFFSIKESDTSLLEHKKKQNQ 222
P FF + SD + + +K+Q +
Sbjct: 1127 APRFFKV--SDPTKMSKRKRQER 1147
>AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1034
Length = 1034
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 18 EKLGCLEEVLTIVSMLSVP-SVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
+K C +E+++I +MLS+ S+F+RPKD+ +D AR F DH+ L VY WK+
Sbjct: 826 DKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKE 885
Query: 76 HDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHN 135
++ WC ++++ V+ +++AR++R QL +L+++ I +++ + D VRK++ + +F +
Sbjct: 886 TNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPH 945
Query: 136 SARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQW 195
+A+ + Y + H+HP+S L P +VVYHELVLTSKEYM+ T ++P+W
Sbjct: 946 TAKLQKNGSYRTVKHPQTVHIHPNSGL--SQVLPRWVVYHELVLTSKEYMRQVTELKPEW 1003
Query: 196 LAELGPMFFSIKE 208
L EL P ++ +K+
Sbjct: 1004 LIELAPHYYQLKD 1016
>AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1044
Length = 1044
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 18 EKLGCLEEVLTIVSMLSVP-SVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
+K C +E+++I +MLS+ S+F+RPKD+ +D AR F DH+ L VY WK+
Sbjct: 836 DKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKE 895
Query: 76 HDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHN 135
++ WC ++++ V+ +++AR++R QL +L+++ I +++ + D VRK++ + +F +
Sbjct: 896 TNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPH 955
Query: 136 SARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQW 195
+A+ + Y + H+HP+S L P +VVYHELVLTSKEYM+ T ++P+W
Sbjct: 956 TAKLQKNGSYRTVKHPQTVHIHPNSGL--SQVLPRWVVYHELVLTSKEYMRQVTELKPEW 1013
Query: 196 LAELGPMFFSIKE 208
L EL P ++ +K+
Sbjct: 1014 LIELAPHYYQLKD 1026
>AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein |
chr2:14872728-14879615 FORWARD LENGTH=1044
Length = 1044
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 123/193 (63%), Gaps = 4/193 (2%)
Query: 18 EKLGCLEEVLTIVSMLSV-PSVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
+K C +E+++I +MLS+ PS+F+RPKD+ +D A + F V DH+ +Y WK+
Sbjct: 836 DKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKE 895
Query: 76 HDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHN 135
+Y WC ++++ V+ +++AR++R QL +L+++ I +++ + D +RK++ + +F +
Sbjct: 896 TNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIRKSIVAGFFPH 955
Query: 136 SARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQW 195
+A+ + Y + H+HP+S L P +VVYH+LVLTSKEYM+ T ++P+W
Sbjct: 956 TAKLQKNGSYRTVKHPQTVHIHPASGL--SQVLPRWVVYHQLVLTSKEYMRQVTELKPEW 1013
Query: 196 LAELGPMFFSIKE 208
L E+ P ++ +K+
Sbjct: 1014 LIEIAPHYYQLKD 1026
>AT4G18465.1 | Symbols: | RNA helicase family protein |
chr4:10197056-10201611 FORWARD LENGTH=695
Length = 695
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 114/199 (57%), Gaps = 8/199 (4%)
Query: 19 KLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDY 78
+LGC E++TI ++LSV SV+ + +E D A+ RF+ E DH+T NVY+ + +
Sbjct: 501 ELGCSHEIITIAAVLSVQSVWIIARGVQKEQDEAKLRFAAAEGDHVTFLNVYKGFLESKK 560
Query: 79 RGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHNSAR 138
WC +FL+ + ++K E+R QL I ++L I L +C D + VRKAV + +F N+ R
Sbjct: 561 PTQWCYKNFLNYQSMKKVVEIRDQLKRIARRLGITLKSCDGDMEAVRKAVTAGFFANACR 620
Query: 139 ----SKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQ 194
S GV Y R ++HPSS L+ + P++VVY +V T ++YM+ + P
Sbjct: 621 LEPHSNGV--YKTIRGSEEVYIHPSSVLFRV--NPKWVVYQSIVSTERQYMRNVVTINPS 676
Query: 195 WLAELGPMFFSIKESDTSL 213
WL E+ P F+ +++ S
Sbjct: 677 WLTEVAPHFYQNRQNAMSF 695
>AT3G62310.1 | Symbols: | RNA helicase family protein |
chr3:23057516-23060561 REVERSE LENGTH=726
Length = 726
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 113/192 (58%), Gaps = 7/192 (3%)
Query: 19 KLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDY 78
+ C E+L++ +MLSVP+ F RP++ + +D A+ RF E DHLTL NVY +KQ++
Sbjct: 507 EFNCSNEILSVSAMLSVPNCFIRPREAQKAADEAKARFGHIEGDHLTLLNVYHAFKQNNE 566
Query: 79 RGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPL-TTCFPDTDI---VRKAVCSAYFH 134
+WC ++F++ + ++ A VR QL+ I+ + N+ + +T F D +RKA+ + YF
Sbjct: 567 DPNWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFM 626
Query: 135 NSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQ 194
A + Y+ + HLHPS+ L PE+V+Y+E VLTS+ +++ T + +
Sbjct: 627 QVAHLERTGHYLTVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDIRGE 683
Query: 195 WLAELGPMFFSI 206
WL ++ ++ +
Sbjct: 684 WLVDVASHYYDL 695
>AT2G47250.1 | Symbols: | RNA helicase family protein |
chr2:19399923-19402981 REVERSE LENGTH=729
Length = 729
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 124/216 (57%), Gaps = 12/216 (5%)
Query: 19 KLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDY 78
+ C E+L++ +MLSVP+ F RP++ + +D A+ RF + DHLTL NVY +KQ++
Sbjct: 511 EFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNE 570
Query: 79 RGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPL-TTCFPDTDI---VRKAVCSAYFH 134
+WC ++F++ + ++ A VR QL+ I+ + N+ + +T F D +RKA+ + YF
Sbjct: 571 DPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFM 630
Query: 135 NSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQ 194
A + Y+ + HLHPS+ L PE+V+Y+E VLT++ +++ T + +
Sbjct: 631 QVAHLERTGHYLTVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTTRNFIRTVTDIRGE 687
Query: 195 WLAELGPMFFSIK-----ESDTSLLEHKKKQNQEKT 225
WL ++ ++ + E+ +L + KK+ +EK
Sbjct: 688 WLVDVAQHYYDLSNFPNCEAKRALEKLYKKREREKN 723
>AT5G14900.1 | Symbols: | helicase associated (HA2)
domain-containing protein | chr5:4822676-4823581 REVERSE
LENGTH=301
Length = 301
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 121/221 (54%), Gaps = 14/221 (6%)
Query: 19 KLGCLEEVLTIVSMLSVPSVFFRPKDRAEES-DAARERFSVPESDHLTLYNVYQQWKQHD 77
+ C E+L+I +MLSVP+ F RP+ A+++ D A+ F+ + DHLTL N++ + Q++
Sbjct: 77 QFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHIDGDHLTLLNLFHAFLQNN 136
Query: 78 YRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDI------VRKAVCSA 131
+WC F++ + ++ A VR QL+ I+ + I L C PD + +RKA+ +
Sbjct: 137 QDPNWCCTKFINYRAMKSAVSVREQLVRIMLRFQIKL--CSPDFNSRDYYVNIRKALLAG 194
Query: 132 YFHNSARSKGVREYINCR--SGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTT 189
YF A + Y+ R HLHPS+ L PE+VVY+E V TS+ +++ T
Sbjct: 195 YFMQVAHLERTGHYLTFRDKDDQVVHLHPSNCL---DHKPEWVVYNEYVFTSRNFIRTVT 251
Query: 190 AVEPQWLAELGPMFFSIKESDTSLLEHKKKQNQEKTSMEEE 230
+ +WL ++ P ++ + +S + +++ +K + EE
Sbjct: 252 HIRGEWLVDVAPHYYKLANFPSSEAKRVLERHYKKRKLSEE 292
>AT1G26370.1 | Symbols: | RNA helicase family protein |
chr1:9122030-9125368 REVERSE LENGTH=717
Length = 717
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 117/204 (57%), Gaps = 16/204 (7%)
Query: 19 KLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQW----- 73
+ CLEE+L V++LSV S+F+ P+++ EE+ ++ F+ E DHLT +VY++
Sbjct: 516 QFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYLSVYRESDEFLE 575
Query: 74 -KQHDYRGD--------WCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIV 124
++ G+ WC +++++ + L+ AR++ Q+ + ++++ +++C D
Sbjct: 576 KRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCGNDMLAF 635
Query: 125 RKAVCSAYFHNSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEY 184
R+ + +++F +A+ + Y SG H+HP+S L+ PE V+++EL+ TSK+Y
Sbjct: 636 RRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSVLF--RAKPECVIFNELMQTSKKY 693
Query: 185 MQCTTAVEPQWLAELGPMFFSIKE 208
++ T ++ WL+EL P F E
Sbjct: 694 IKNLTIIDSLWLSELAPHHFQTAE 717
>AT1G27900.1 | Symbols: | RNA helicase family protein |
chr1:9715615-9720346 REVERSE LENGTH=700
Length = 700
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 47/251 (18%)
Query: 21 GCLEEVLTIVSMLSVPSVFF----RPKDRAEESDAARERFSVPES----DHLTLYNVYQQ 72
GCL + LT+V+MLS + +P ++ + D E ++P DH+ L +++
Sbjct: 443 GCLSQALTVVAMLSAETTLLPARSKPSEKKRKHD---EDSNLPNGSGYGDHIQLLQIFES 499
Query: 73 WKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPL---------TTCFPDTDI 123
W + +Y WC ++ + V+G+ ++VR QL I++K++ ++ D
Sbjct: 500 WDRTNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRK 559
Query: 124 VRKAVCSAYFHNSA----RSKGVREYINCRSGMPCHLHPSSALYG--MGCTPEYVVYHEL 177
+RKA+C + A R G R ++ +S + +HPSS L G P YVVYHEL
Sbjct: 560 LRKALCVGNANQIAERMLRHNGYRT-LSFQSQL-VQVHPSSVLSADNDGMMPNYVVYHEL 617
Query: 178 VLTSKEYMQCTTAVEPQWLAEL--------------GPM-FFSIKESDTSLLEHKKKQNQ 222
+ T++ +M+ AV+ W+A + GP F + E T L K N
Sbjct: 618 ISTTRPFMRNVCAVDMAWVAPIKRKIEKLNVRKLSGGPAPSFKVPEEKTEL----SKNNA 673
Query: 223 EKTSMEEEMEN 233
E ++ E +E+
Sbjct: 674 ETPAVSENVES 684
>AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protein |
chr1:12099738-12104108 REVERSE LENGTH=1237
Length = 1237
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 32/188 (17%)
Query: 41 RPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVR 100
R KDR E+ AAR+RFS P SD LT+ ++ + +C + LH+K + + +++
Sbjct: 895 RKKDRKEKIKAARDRFSNPSSDALTVAYALHSFEVSENGMGFCEANGLHLKTMDEMSKLK 954
Query: 101 SQLL------------------------DILKKLNIPLTTCFP------DTDIVRKAVCS 130
QLL D+ K I +T + +++ +A+C+
Sbjct: 955 DQLLRLVFNCCKPSETEDSFSWTHGTIQDVEKSWRITTSTSSKTPLLQNEEELLGEAICA 1014
Query: 131 AYFHNSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTA 190
+ AR EY C P LH S+L + PE +VY EL+LT++ YM T
Sbjct: 1015 GWADRVARKTRATEYQACAVQEPVFLHRWSSL--INSAPELLVYSELLLTNRPYMHGATR 1072
Query: 191 VEPQWLAE 198
V P+WL +
Sbjct: 1073 VRPEWLVK 1080
>AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:88847-94635 REVERSE LENGTH=1113
Length = 1113
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 13/128 (10%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQH 76
G LGCL+ +LT+ + LSV F P+D+ + ++AA+ +FS SDHL L Y+ WK+
Sbjct: 720 GAILGCLDPILTVAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKA 779
Query: 77 DYRG---DWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFP--------DTDIVR 125
+ D+C +FL ++ LR +R + +LK + L P D ++ R
Sbjct: 780 EEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLK--DTGLIDGNPSICNSEGNDANLTR 837
Query: 126 KAVCSAYF 133
+C +
Sbjct: 838 AVICYGMY 845
>AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:17989670-17995169 REVERSE LENGTH=1197
Length = 1197
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 24/202 (11%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWK- 74
G CL+ V+T+V+ LSV F P D+ + ++ AR +FS + SDHLTL Y WK
Sbjct: 800 GAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKD 859
Query: 75 -QHDYRG-DWCNDHFLHVKGLRKAREVRSQLLDILKKLNI--PLTTCFP---DTDIVRKA 127
+ + G D+C +FL + L+ +R Q ++LK+ ++ + C D +VR
Sbjct: 860 AERTHSGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAI 919
Query: 128 VCSAYFHNSARSKGVREYINCRSGMPCH--------LHPSSALYGMGCTP-EYVVYHELV 178
+C+ F GV +N + L+ SS + P ++V+++ V
Sbjct: 920 ICAGMF------PGVCSVVNKEKSITLKTMEDGQVLLYSSSVNGNVPMIPFPWLVFNDKV 973
Query: 179 LTSKEYMQCTTAVEPQWLAELG 200
+ +++ +TAV L G
Sbjct: 974 KVNSVFLRDSTAVSDSVLLLFG 995
>AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:17989517-17995169 REVERSE LENGTH=1206
Length = 1206
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 24/202 (11%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWK- 74
G CL+ V+T+V+ LSV F P D+ + ++ AR +FS + SDHLTL Y WK
Sbjct: 800 GAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKD 859
Query: 75 -QHDYRG-DWCNDHFLHVKGLRKAREVRSQLLDILKKLNI--PLTTCFP---DTDIVRKA 127
+ + G D+C +FL + L+ +R Q ++LK+ ++ + C D +VR
Sbjct: 860 AERTHSGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAI 919
Query: 128 VCSAYFHNSARSKGVREYINCRSGMPCH--------LHPSSALYGMGCTP-EYVVYHELV 178
+C+ F GV +N + L+ SS + P ++V+++ V
Sbjct: 920 ICAGMF------PGVCSVVNKEKSITLKTMEDGQVLLYSSSVNGNVPMIPFPWLVFNDKV 973
Query: 179 LTSKEYMQCTTAVEPQWLAELG 200
+ +++ +TAV L G
Sbjct: 974 KVNSVFLRDSTAVSDSVLLLFG 995
>AT2G35920.1 | Symbols: | RNA helicase family protein |
chr2:15075674-15080506 FORWARD LENGTH=995
Length = 995
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 18/200 (9%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
G C+ LTI + L+ S F P +R EE+D A+ F+ SDH+ L Y+ ++
Sbjct: 725 GAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAKRYFAGDSCSDHIALLKAYEGYRD 784
Query: 76 HDYRG---DWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFP--------DTDIV 124
G D+C +FL LR ++R+Q LD+L + + P D +++
Sbjct: 785 AKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGF-VDKSKPNAYNQYSYDMEMI 843
Query: 125 RKAVCSAYFHNSARSK--GVREYINCRSGMPCHLHPSS--ALYGMGCTPEYVVYHELVLT 180
+C+ + N + K G R + +HP S A + P Y+VY E V T
Sbjct: 844 SAVLCAGLYPNVVQCKRRGKRTAFYTKELGKVDIHPGSVNARVNLFSLP-YLVYSEKVKT 902
Query: 181 SKEYMQCTTAVEPQWLAELG 200
+ Y++ +T + L G
Sbjct: 903 TSVYIRDSTNISDYALLMFG 922
>AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:1428796-1434516 FORWARD LENGTH=1161
Length = 1161
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 16/134 (11%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
G C + +LTIVS LSV F P+D+ + + +A+ RFS + SDH+ L ++ WK
Sbjct: 761 GAIFRCFDPILTIVSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYSDHMALVRAFEGWKD 820
Query: 76 HDYRG---DWCNDHFLHVKGLRKAREVRSQLLDILKK---------LNIPLTTCFPDTDI 123
+ G ++C +FL + L+ +R Q ILK+ LN L+ + +
Sbjct: 821 AEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLSH---NQSL 877
Query: 124 VRKAVCSAYFHNSA 137
VR +CS F A
Sbjct: 878 VRAVICSGLFPGIA 891
>AT5G10370.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr5:3261245-3267188 FORWARD LENGTH=1775
Length = 1775
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 28/224 (12%)
Query: 20 LGCL------EEVLTIVSMLSVPSVFFRPK--DRAEESDAARERFSVPESDHLTLYNVYQ 71
LGC E ++ M + S+F R D ++D + +F D TL +VY+
Sbjct: 737 LGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNQNGDLFTLLSVYK 796
Query: 72 QWKQ--HDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDI------ 123
+W + R WC ++ L+ K +R+ + +L +++ LT P +
Sbjct: 797 EWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEICIER---ELTLVSPSYWVWNPNEG 853
Query: 124 ------VRKAVCSAYFHNSARSKGVRE--YINCRSGMPCHLHPSSALYGMGCTPEYVVYH 175
++ + ++ N A G + Y +G LHPS +L G P +VV+
Sbjct: 854 TKHDKHLKMVILASLAENVAMYTGYNQLGYEVALTGQQVQLHPSCSLLAFGQKPSWVVFG 913
Query: 176 ELVLTSKEYMQCTTAVEPQWLAELG-PMFFSIKESDTSLLEHKK 218
EL+ +Y+ C TA + + L L P F + + D L KK
Sbjct: 914 ELLSIVDQYLVCVTACDFEALYMLDPPPPFDVSQMDERRLRIKK 957
>AT4G01020.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr4:439086-445043 FORWARD LENGTH=1787
Length = 1787
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 27/206 (13%)
Query: 20 LGCL------EEVLTIVSMLSVPSVFFRPK--DRAEESDAARERFSVPESDHLTLYNVYQ 71
LGC E ++ M + S+F R D ++D + +F D TL +VY+
Sbjct: 734 LGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYK 793
Query: 72 QWKQ--HDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPD--------- 120
+W D R WC ++ L+ K +R+ + +L +++ LT P
Sbjct: 794 EWASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEICIER---ELTLVSPSYWVWNPNEG 850
Query: 121 ---TDIVRKAVCSAYFHNSARSKGVRE--YINCRSGMPCHLHPSSALYGMGCTPEYVVYH 175
++ + ++ N A G + Y + LHPS +L G P +VV+
Sbjct: 851 TKHDKYLKMVILASLAENVAMYTGYDQLGYEVALTSQQVQLHPSCSLLAFGQKPSWVVFG 910
Query: 176 ELVLTSKEYMQCTTAVEPQWLAELGP 201
EL+ +Y+ C TA + + L L P
Sbjct: 911 ELLSIVDQYLVCVTAFDFEALYMLDP 936
>AT1G58060.1 | Symbols: | RNA helicase family protein |
chr1:21489480-21501775 REVERSE LENGTH=1459
Length = 1459
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 91/240 (37%), Gaps = 63/240 (26%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERF-------------SVPESDH 63
G GCL +L+I + LS S F PKD + D + + +SDH
Sbjct: 1138 GGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQSDH 1197
Query: 64 LTLYNVYQQW-KQHDYRG-----DWCNDHFLHVKGLRKAREVRSQ---LLDILKKLNIPL 114
L + Y +W K RG +C FL +R R++R Q LL + +N+P
Sbjct: 1198 LLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGLINLPK 1257
Query: 115 TTCFPDT-----------------------DIVRKAVCSAYFHN-SARSKGVRE------ 144
T F ++V+ +C+ + N +A KG+ E
Sbjct: 1258 TGEFSGRKKENLDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITETTFNSL 1317
Query: 145 ---------YINCRSG-MPCHLHPSSALYGMGCTPE-YVVYHELVLTSKEYMQCTTAVEP 193
Y G H+HPSS ++V+ E V T+K Y++ TT V P
Sbjct: 1318 TKQGNQTKSYSAWYDGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRDTTIVSP 1377