Miyakogusa Predicted Gene
- Lj0g3v0204989.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0204989.1 Non Chatacterized Hit- tr|I1N112|I1N112_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7168
PE=,58.9,0,mTERF,Mitochodrial transcription termination
factor-related; seg,NULL; SUBFAMILY NOT NAMED,NULL; FAM,CUFF.13080.1
(400 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G07900.1 | Symbols: | Mitochondrial transcription terminatio... 265 3e-71
AT1G21150.1 | Symbols: | Mitochondrial transcription terminatio... 194 1e-49
AT1G62120.1 | Symbols: | Mitochondrial transcription terminatio... 179 4e-45
AT1G61970.2 | Symbols: | Mitochondrial transcription terminatio... 175 4e-44
AT1G61970.1 | Symbols: | Mitochondrial transcription terminatio... 175 4e-44
AT1G61980.1 | Symbols: | Mitochondrial transcription terminatio... 172 3e-43
AT1G61990.1 | Symbols: | Mitochondrial transcription terminatio... 155 4e-38
AT1G62010.1 | Symbols: | Mitochondrial transcription terminatio... 149 4e-36
AT3G46950.1 | Symbols: | Mitochondrial transcription terminatio... 126 2e-29
AT1G62085.1 | Symbols: | Mitochondrial transcription terminatio... 123 3e-28
AT1G61960.1 | Symbols: | Mitochondrial transcription terminatio... 121 1e-27
AT5G64950.1 | Symbols: | Mitochondrial transcription terminatio... 120 1e-27
AT1G62150.1 | Symbols: | Mitochondrial transcription terminatio... 120 1e-27
AT1G56380.2 | Symbols: | Mitochondrial transcription terminatio... 108 7e-24
AT1G56380.1 | Symbols: | Mitochondrial transcription terminatio... 108 8e-24
AT1G62110.1 | Symbols: | Mitochondrial transcription terminatio... 102 7e-22
AT5G23930.1 | Symbols: | Mitochondrial transcription terminatio... 94 1e-19
AT2G21710.1 | Symbols: EMB2219 | Mitochondrial transcription ter... 66 5e-11
AT2G36000.1 | Symbols: | Mitochondrial transcription terminatio... 55 7e-08
AT2G36000.2 | Symbols: | Mitochondrial transcription terminatio... 55 8e-08
AT5G06810.1 | Symbols: | Mitochondrial transcription terminatio... 55 1e-07
AT5G54180.1 | Symbols: PTAC15 | plastid transcriptionally active... 55 1e-07
AT4G14605.1 | Symbols: | Mitochondrial transcription terminatio... 54 2e-07
AT2G44020.1 | Symbols: | Mitochondrial transcription terminatio... 54 3e-07
AT1G74120.1 | Symbols: | Mitochondrial transcription terminatio... 53 3e-07
AT3G60400.1 | Symbols: | Mitochondrial transcription terminatio... 52 8e-07
AT1G78930.1 | Symbols: | Mitochondrial transcription terminatio... 50 2e-06
AT4G02990.1 | Symbols: | Mitochondrial transcription terminatio... 50 2e-06
AT5G55580.1 | Symbols: | Mitochondrial transcription terminatio... 49 6e-06
>AT5G07900.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:2520188-2521405 FORWARD
LENGTH=405
Length = 405
Score = 265 bits (678), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 140/334 (41%), Positives = 206/334 (61%), Gaps = 2/334 (0%)
Query: 60 TYTISYLTKSCGLSPDSAKKLSIGLNLKDPDGPNAVLDLLKNYGFSKTQVAKLVGKHPLL 119
++T++YL SCGLSPDSA S L L P+ PN VL+LL+++GF+ Q++ LV K P+L
Sbjct: 69 SFTLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 128
Query: 120 LFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHILLVRSLKNCIVPRYKILRGVLRNDQ 179
L ANA+ LLPKL F SIGVS + + + L ++ +L RSL N ++P Y L+ VL +D+
Sbjct: 129 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 188
Query: 180 EAARALRNAPRAFTYCDIMNKLVQNIEFLRQFGVPQSSISLMVVNFPSATYIHHSKFVEA 239
+ ALR F D LV NI ++ + GVP+ I L++ +FP A + +F
Sbjct: 189 KIVAALRRTTWVFLE-DHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAI 247
Query: 240 VKTVKEIGLDPSKTTFVMAVQVLLGL-SQAARESRFEFFHRRGWDREMTLQAFRKFPNFM 298
K +E+G +P K+TFV+A+ L G +++ + FE + R GW + + AF+K P+ M
Sbjct: 248 AKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCM 307
Query: 299 KLSQETVAKKMSYMVNDMGWTLEDVAGFPPVLGFSLEKRIIPRLSVIKVLKSKGLIKNDM 358
LS+ + + M Y VN+M +A P VL FSLEKRIIPR SV KVL S GL+K D
Sbjct: 308 MLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDW 367
Query: 359 HLSSFMCSSEEVFLKKFVINFQDDAPLLTDVYKG 392
L+S + E+VFL+K VI ++++ P L ++Y G
Sbjct: 368 SLTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401
>AT1G21150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:7406406-7407578 REVERSE
LENGTH=390
Length = 390
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 179/333 (53%), Gaps = 2/333 (0%)
Query: 59 DTYTISYLTKSCGLSPDSAKKLSIGLNLKDPDGPNAVLDLLKNYGFSKTQVAKLVGKHPL 118
+++T+SYL SCGLS +SAK S + L P++VL L K++GF+ Q+ ++ P
Sbjct: 55 ESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPR 114
Query: 119 LLFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHILLVRSLKNCIVPRYKILRGVLRND 178
+L + + + PKL F SIG ST+D +++ ++ +L SL ++P Y L+ +L +
Sbjct: 115 VLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEE 174
Query: 179 QEAARALRNAPRAFTYCDIMNKLVQNIEFLRQFGVPQSSISLMVVNFPSATYIHHSKFVE 238
+ + L+ R F+ I + + + R+ GVP SI +V P + +F E
Sbjct: 175 ESVVKCLKRGIRCFSL-KITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNE 233
Query: 239 AVKTVKEIGLDPSKTTFVMAVQVLLGLSQAARESRFEFFHRRGWDREMTLQAFRKFPNFM 298
+ V G DP K FV A+ S++A E +F+ F GW +E + A +FPN +
Sbjct: 234 VLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCV 293
Query: 299 KLSQETVAKKMSYMVNDMGWTLEDVAGFPPVLGFSLEKRIIPRLSVIKVLKSKGLI-KND 357
+S E + + Y+VN++G D+ P VL S+EKRI PR VI +L SKGL+ K D
Sbjct: 294 TVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKED 353
Query: 358 MHLSSFMCSSEEVFLKKFVINFQDDAPLLTDVY 390
++ + + F+ KFV+ +QD+ P L +
Sbjct: 354 INYFTILKLKSSEFMDKFVLKYQDEMPQLVQPF 386
>AT1G62120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22960326-22961639 REVERSE
LENGTH=437
Length = 437
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 196/373 (52%), Gaps = 42/373 (11%)
Query: 54 DYCKGDTYTISYLTKSCGLSPDSAKKLSIGLNLKDPDGPNAVLDLLKNYGFSKTQVAKLV 113
D KG +T+SYL S GL+ A+ +S+ ++ + P++VL LL+++GF+ +Q++ ++
Sbjct: 50 DGRKGHNFTVSYLVDSLGLATKVAESISMKVSFDNKGNPDSVLSLLRSHGFTDSQISNII 109
Query: 114 GKHPLLLFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHILLVRSLKNCIVPRYKILRG 173
P LL +A+++L PKL+FL SIG S++++ + + A +L + + Y ++
Sbjct: 110 RTFPRLLILDAEKSLAPKLQFLQSIGASSSELTETVSAVPKILGKRKGKSLSRYYDFVKV 169
Query: 174 VLRNDQEAARALRNAPRAFTYCDIMNKLVQNIEFLRQFGVPQSSI-SLMVVNFPSATYIH 232
++ D+ + L + ++N+ LR+ GVPQ + SL++ + +
Sbjct: 170 IIEADKSS--KLEKLCHSLPEGSKQENKIRNLLVLREMGVPQRLLFSLLISD--AGDVCG 225
Query: 233 HSKFVEAVKTVKEIGLDPSKTTFVMAVQVLLGLSQAARESRF------------------ 274
KF E++K EIG DP+ TFV A+ VL GLS E++F
Sbjct: 226 KEKFKESLKKAVEIGFDPTTATFVKALNVLYGLSDKGIENKFNACKRLGLAVDDVWAMFK 285
Query: 275 -----------------EFFHRRGWDREMTLQAFRKFPNFMKLSQETVAKKMSYMVNDMG 317
E F G+ R+ L ++FP + S E + K ++V +M
Sbjct: 286 KWPNILTKSEKKIENSVETFLGLGFSRDEFLMMVKRFPQCIGYSTELMKTKTEFLVTEMN 345
Query: 318 WTLEDVAGFPPVLGFSLEKRIIPRLSVIKVLKSKGLIKNDM-HLSSFMCSSEEVFLKKFV 376
W L+ VA P VLG+SLEKR +PR +VIKVL SKGL+++++ +SS + S+ EVFL +V
Sbjct: 346 WPLKAVASIPQVLGYSLEKRTVPRCNVIKVLISKGLLESELPPISSVLTSTSEVFLYMYV 405
Query: 377 INFQDDAPLLTDV 389
DD L+ ++
Sbjct: 406 RK-HDDKQLVAEL 417
>AT1G61970.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904713-22905969 FORWARD
LENGTH=418
Length = 418
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 196/363 (53%), Gaps = 45/363 (12%)
Query: 57 KGDTYTISYLTKSCGLSPDSAKKLSIGLNLKDPDGPNAVLDLLKNYGFSKTQVAKLVGKH 116
KG+ +T+SYL S GL+ A+ +S ++ +D + P++VL+LL ++GF+ +Q++ ++ +
Sbjct: 49 KGNNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDY 108
Query: 117 PLLLFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHILLVRSLKNCIVPRYKILRG-VL 175
P LL A+A+++L PKL+FL S G S++++ +++ + +L + I Y ++ +L
Sbjct: 109 PQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLL 168
Query: 176 RNDQEAARALRNAPRAFTYCDIMNKLVQNIEFLRQFGVPQSSI-SLMVVNFPSATYIHHS 234
+ + + P+ ++ NK ++N+ LR+ G+P + SL++ + S
Sbjct: 169 EKSSKNEKLCHSLPQG----NLENK-IRNVSVLRELGMPHKLLFSLLISD--SQPVCGKE 221
Query: 235 KFVEAVKTVKEIGLDPSKTTFVMAVQVLLGLSQAARESRFEFFHRRGWDREMTLQAFRK- 293
KF E +K V E+G DP+ + FV A+QV+ +++ E + + G+D +F+K
Sbjct: 222 KFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKW 281
Query: 294 ----------------------------------FPNFMKLSQETVAKKMSYMVNDMGWT 319
FP + LS ETV KK ++V M W
Sbjct: 282 PISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWP 341
Query: 320 LEDVAGFPPVLGFSLEKRIIPRLSVIKVLKSKGLIKNDM-HLSSFMCSSEEVFLKKFVIN 378
L+ V P V G+SLEKRI+PR +VIK L SKGL++N++ +S + +++VFL ++V N
Sbjct: 342 LKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVAN 401
Query: 379 FQD 381
D
Sbjct: 402 HVD 404
>AT1G61970.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904713-22905969 FORWARD
LENGTH=418
Length = 418
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 196/363 (53%), Gaps = 45/363 (12%)
Query: 57 KGDTYTISYLTKSCGLSPDSAKKLSIGLNLKDPDGPNAVLDLLKNYGFSKTQVAKLVGKH 116
KG+ +T+SYL S GL+ A+ +S ++ +D + P++VL+LL ++GF+ +Q++ ++ +
Sbjct: 49 KGNNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDY 108
Query: 117 PLLLFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHILLVRSLKNCIVPRYKILRG-VL 175
P LL A+A+++L PKL+FL S G S++++ +++ + +L + I Y ++ +L
Sbjct: 109 PQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLL 168
Query: 176 RNDQEAARALRNAPRAFTYCDIMNKLVQNIEFLRQFGVPQSSI-SLMVVNFPSATYIHHS 234
+ + + P+ ++ NK ++N+ LR+ G+P + SL++ + S
Sbjct: 169 EKSSKNEKLCHSLPQG----NLENK-IRNVSVLRELGMPHKLLFSLLISD--SQPVCGKE 221
Query: 235 KFVEAVKTVKEIGLDPSKTTFVMAVQVLLGLSQAARESRFEFFHRRGWDREMTLQAFRK- 293
KF E +K V E+G DP+ + FV A+QV+ +++ E + + G+D +F+K
Sbjct: 222 KFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKW 281
Query: 294 ----------------------------------FPNFMKLSQETVAKKMSYMVNDMGWT 319
FP + LS ETV KK ++V M W
Sbjct: 282 PISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWP 341
Query: 320 LEDVAGFPPVLGFSLEKRIIPRLSVIKVLKSKGLIKNDM-HLSSFMCSSEEVFLKKFVIN 378
L+ V P V G+SLEKRI+PR +VIK L SKGL++N++ +S + +++VFL ++V N
Sbjct: 342 LKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVAN 401
Query: 379 FQD 381
D
Sbjct: 402 HVD 404
>AT1G61980.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22908162-22909418 FORWARD
LENGTH=418
Length = 418
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 192/361 (53%), Gaps = 41/361 (11%)
Query: 57 KGDTYTISYLTKSCGLSPDSAKKLSIGLNLKDPDGPNAVLDLLKNYGFSKTQVAKLVGKH 116
KG ++T+SYL S GL A+ +S ++ +D D P++VL+LL+++GF+ +Q++ +V +
Sbjct: 49 KGKSFTVSYLVDSLGLPKKLAESVSRKVSFEDKDNPDSVLNLLRSHGFTDSQISTIVTDY 108
Query: 117 PLLLFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHILLVRSLKNCIVPRYKILRGVLR 176
P LL A+A+++L PKL+FL S G S++++ +++ +L + I Y ++ L
Sbjct: 109 PQLLVADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKRGHKTISVFYDFIKETLL 168
Query: 177 NDQEAARALRNAPRAFTYCDIMNKLVQNIEFLRQFGVPQSSISLMVVNFPSATYIHHSKF 236
+ + + + F ++ NK ++N+ LR+ G+P + ++++ + KF
Sbjct: 169 DKSSKSE---KSCQPFPQGNLENK-IRNLSVLRELGMPHKLLFPLLISCDVPVF-GKEKF 223
Query: 237 VEAVKTVKEIGLDPSKTTFVMAVQVLLGLSQAARESRFEFFHRRGWDREMTLQAFRKFPN 296
E++K V E+G DPS + FV A+ V+ LS E + + R G+D E F+++PN
Sbjct: 224 EESLKKVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRWPN 283
Query: 297 FMK-----------------------------------LSQETVAKKMSYMVNDMGWTLE 321
F+ LS E V KK ++V M W L+
Sbjct: 284 FLTHSEKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLK 343
Query: 322 DVAGFPPVLGFSLEKRIIPRLSVIKVLKSKGLIKNDM-HLSSFMCSSEEVFLKKFVINFQ 380
+ P VLG+SLEKR +PR +V++ L SKGLI +++ +S +++VFL ++V +
Sbjct: 344 ALVSNPAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFLNRYVKRHE 403
Query: 381 D 381
D
Sbjct: 404 D 404
>AT1G61990.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22911453-22912697 FORWARD
LENGTH=414
Length = 414
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 189/375 (50%), Gaps = 50/375 (13%)
Query: 54 DYCKGDTYTISYLTKSCGLSPDSAKKLSIGLNLKDPDGPNAVLDLLKNYGFSKTQVAKLV 113
D KG +T+SYL S GLS A+ +S ++ +D P++VL L ++YGF+ +Q++ ++
Sbjct: 46 DGRKGKNFTVSYLVDSLGLSKKLAESISRKVSFEDKVNPDSVLSLFRSYGFTDSQISTII 105
Query: 114 GKHPLLLFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHILLVRSLKNCIVPRYKILRG 173
+PLLL A+AK+ L KL+ L S G S++++ +++ +L K I Y ++
Sbjct: 106 TDYPLLLVADAKKALGRKLQILQSRGASSSEITEIVSTVPRILG---KKSITVYYDAVKD 162
Query: 174 VLRNDQEAARALRNAPRAFTYCDIMNKLVQNIEFLRQFGVPQSSISLMVVNFPSATYIHH 233
++ D ++ L + NK ++N+ LR+ G+P S + L ++ S
Sbjct: 163 IIVADTSSSYELPQGSQG-------NK-IRNVSALRELGMP-SRLLLPLLVSKSQPVCGK 213
Query: 234 SKFVEAVKTVKEIGLDPSKTTFVMAVQVLLGLSQAARESRFEFFHRRGWDREMTLQAFRK 293
F ++K V E+G DP+ T FV+A+++L +S+ E + F G+ + + F+K
Sbjct: 214 ENFDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKK 273
Query: 294 FPNFMKLSQ-----------------------------------ETVAKKMSYMVNDMGW 318
P+ +K+S+ E+V KK ++V M W
Sbjct: 274 TPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKW 333
Query: 319 TLEDVAGFPPVLGFSLEKRIIPRLSVIKVLKSKGLIKNDMHL---SSFMCSSEEVFLKKF 375
+ P V G+S+EKRIIPR ++++ L SKGL++ L SS + ++E FL ++
Sbjct: 334 PRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFLDRY 393
Query: 376 VINFQDDAPLLTDVY 390
V+ + P L ++
Sbjct: 394 VMKHNELVPTLMAIF 408
>AT1G62010.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22915886-22917133 FORWARD
LENGTH=415
Length = 415
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 174/351 (49%), Gaps = 54/351 (15%)
Query: 80 LSIGLNLKDPDGPNAVLDLLKNYGFSKTQVAKLVGKHPLLLFANAKRTLLPKLKFLHSIG 139
L + L D ++VLDLL++YGF+ +Q++ ++ +L N +L KL+FL S G
Sbjct: 58 LRLATKLTDKGNSDSVLDLLRSYGFTDSQISSIIRSDSRVLIDNDATSLGSKLQFLQSRG 117
Query: 140 VSTTDMPQVLLANHILLVRSLKNCIVPRYKILRGVLRNDQEAARALRNAPRAFTYCDIMN 199
S++++ +V+ +L + + Y ++ ++ D+ + Y I +
Sbjct: 118 ASSSELTEVVSTVPKILGKREGKSLSRYYDFIKVIIEADKSSK-----------YEKISH 166
Query: 200 KLVQ-----NIEFLRQFGVPQSSISLMVVNFPSATYIHHSKFVEAVKTVKEIGLDPSKTT 254
L Q NI LR+ GVPQ + L++++ S KF ++K V E+G DP+ +T
Sbjct: 167 SLAQGNKIRNILVLRELGVPQKRLLLLLIS-KSQPVCGKEKFDASLKKVVEMGFDPTTST 225
Query: 255 FVMAVQVLLGLSQAARESRFEFFHRRG------------WDREMT--------------- 287
FV A+ +L +S E + + G W R +T
Sbjct: 226 FVHALHMLYQMSDKTIEEKIRVYRSVGFSVDDVWAMFKKWPRSLTHSEKKVANSIETFLG 285
Query: 288 --------LQAFRKFPNFMKLSQETVAKKMSYMVNDMGWTLEDVAGFPPVLGFSLEKRII 339
+ F++FP + S E V KK ++V +M W ++ VA P VLG+SLEKR +
Sbjct: 286 LGFSRDVFMMMFKRFPPCIGYSTEAVKKKTEFLVKEMNWPVKAVASIPQVLGYSLEKRTV 345
Query: 340 PRLSVIKVLKSKGLIKNDM-HLSSFMCSSEEVFLKKFVINFQDDAPLLTDV 389
PR +VIKVL SKGL+++++ +SS + S+ E FL +V + DD L+ ++
Sbjct: 346 PRCNVIKVLMSKGLLESELPPMSSVLTSTSESFLNLYV-SKHDDKQLVAEL 395
>AT3G46950.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr3:17289452-17290804 FORWARD
LENGTH=450
Length = 450
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 142/250 (56%), Gaps = 11/250 (4%)
Query: 57 KGDTYTISYLTKSCGLSPDSAKKLSIGLNLKDPDGPNAVLDLLKNYGFSKTQVAKLVGKH 116
KG T+T+SYL +S GL+ A+ +S + +D P++VL+LL++ GF +Q+++++ +
Sbjct: 49 KGSTFTVSYLVESLGLTKKLAETISKKVTFEDKVNPDSVLNLLRSNGFKDSQISRIIRAY 108
Query: 117 PLLLFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHILLVRSLKNCIVPRYKILRGVLR 176
P LL +A+++L PKL+FL S G S++++ +++ +L + + + Y ++ +++
Sbjct: 109 PRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILDKKGEESVSLYYDFVKDIMQ 168
Query: 177 NDQEAARALRNAPRAFTYCDIMNKLVQNIEFLRQFGVPQSSI-SLMVVNFPSATYIHHSK 235
+ + + + N+ ++NI LR+ GVPQ + SL++ + K
Sbjct: 169 DGKSLCISCPEGKKG-------NR-IRNISVLRELGVPQKLLFSLLISRYQPVC--GKEK 218
Query: 236 FVEAVKTVKEIGLDPSKTTFVMAVQVLLGLSQAARESRFEFFHRRGWDREMTLQAFRKFP 295
F E++K V ++G DP+K+ FV A+ V+ +S+ E + + R G+ F+K+P
Sbjct: 219 FEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYKRLGFSEAEIWAIFKKWP 278
Query: 296 NFMKLSQETV 305
F+K S++ +
Sbjct: 279 YFLKFSEKKI 288
>AT1G62085.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22948757-22950142 REVERSE
LENGTH=461
Length = 461
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 187/416 (44%), Gaps = 90/416 (21%)
Query: 57 KGDTYTISYLTKSCGLSPDSAKKLSIGLNLKDPDGPNAVLDLLKNYGFSKTQVAKLVGKH 116
KG ++++SYL S GL A+ +S ++ +D P++VL LL+++GF+ +Q++ ++ +
Sbjct: 52 KGLSFSVSYLVDSLGLPKKVAESISKKVSFEDKGNPDSVLSLLRSHGFTDSQISSIITDY 111
Query: 117 PLLLFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHILLVRSLKNCIVPRYKILRGVLR 176
P LL A+A++++ PKL+FL S G S +++ ++ +L + I Y ++ ++
Sbjct: 112 PQLLVADAEKSIGPKLQFLQSRGASRSELTHIVSTVPEILGKRGDKTISIYYDFVKEIIE 171
Query: 177 NDQEA--ARALRNAPRAFTYCDIMNKLVQNIEFLRQFGVPQSSISLMVVNFPSATYIHH- 233
D+ + + + P NK ++N+ LR+ GVPQ + FP H
Sbjct: 172 ADKSSKFEKLCHSLPEGSKQ---ENK-IRNVLVLRELGVPQRLL------FPLLISDHQP 221
Query: 234 ----SKFVEAVKTVKEIGLDPSKTTFVMAVQVLLGLSQAARESRFEFFHRRGWDREMTLQ 289
F E++K V E+G DP+ + FV A++V+ E++ G+
Sbjct: 222 VCGKENFEESLKKVVEMGFDPTTSKFVKALRVVYRFRDKTIEAKVNVCKSLGFSVGDVWA 281
Query: 290 AFRKFPNFMKLSQE--------------------TVAKKMSYMVN--------------D 315
F+K P+F+ S+ +V KK +N
Sbjct: 282 MFKKCPSFLNFSENKIVQTWETLKKCGLLEDDVLSVLKKFPQCINASEQKIMNSIETFLG 341
Query: 316 MGWTLEDVA----GFPPVL--------------------------------GFSLEKRII 339
+G++ ++VA FP L G+SLEKR I
Sbjct: 342 LGFSRDEVAMIAKRFPQCLILSAETVKKKTEFLVKKMNWPLKAVVSTPAVLGYSLEKRTI 401
Query: 340 PRLSVIKVLKSKGLIKNDM-HLSSFMCSSEEVFLKKFVINFQDD--APLLTDVYKG 392
PR +VIK L SKG + +++ +SS + + E FL ++V N D P L ++ G
Sbjct: 402 PRCNVIKALMSKGSLGSELPGMSSVLVCTNEEFLCRYVKNHDDKKIVPELMAIFTG 457
>AT1G61960.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22902239-22903612 FORWARD
LENGTH=457
Length = 457
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 139/253 (54%), Gaps = 4/253 (1%)
Query: 54 DYCKGDTYTISYLTKSCGLSPDSAKKLSIGLNLKDPDGPNAVLDLLKNYGFSKTQVAKLV 113
D KG+ +T+SYL S GL+ A+ +S ++ ++ P++VL LL +YGF+K+Q++ ++
Sbjct: 46 DSLKGNNFTVSYLVDSLGLTTKLAESISKKVSFEERRNPDSVLSLLTSYGFTKSQISSII 105
Query: 114 GKHPLLLFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHILLVRSLKNCIVPRYKILRG 173
+P LL +A++++ PKL+ L S G S++++ Q++ +L + I Y ++
Sbjct: 106 TIYPRLLALDAEKSIAPKLQSLQSRGASSSELTQIVSTVPKILGKRGHKSITVYYDFVKD 165
Query: 174 VLRNDQEAARALRNAPRAFTYCDIMNKLVQNIEFLRQFGVPQSSISLMVVNFPSATYIHH 233
++ D+ + + +F + NK ++NI LR+ GV Q + ++++
Sbjct: 166 IIEADKSS--SYEKLCHSFPQGNKKNK-IRNISVLRELGVAQRLLFPLLIS-DGQPVCGK 221
Query: 234 SKFVEAVKTVKEIGLDPSKTTFVMAVQVLLGLSQAARESRFEFFHRRGWDREMTLQAFRK 293
+F E++K V E+G DP T FV A++V+ +S E + + R G+ F+K
Sbjct: 222 ERFEESLKKVVEMGFDPETTKFVEALRVIYRMSDKTIEEKVNVYKRLGFGVADVWAIFKK 281
Query: 294 FPNFMKLSQETVA 306
+P+F+ S++ +
Sbjct: 282 WPSFLSYSEKKIT 294
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Query: 275 EFFHRRGWDREMTLQAFRKFPNFMKLSQETVAKKMSYMVNDMGWTLEDVAGFPPVLGFSL 334
E F G+ R+ +++P + + ETV KK ++V +M W LE + P V G+SL
Sbjct: 333 ETFLGLGFSRDEFAMMVKRYPQCIDYTAETVKKKTEFIVKNMNWPLEALVSIPQVFGYSL 392
Query: 335 EKRIIPRLSVIKVLKSKGLIKNDMH---LSSFMCSSEEVFLKKFVINFQDDAPLLTDVYK 391
EKR +PR +VIK L SKGL+K+ +SS + S+++ FL+++V+ AP L ++
Sbjct: 393 EKRTVPRCNVIKTLISKGLMKDGSEAPPMSSVLTSTDQAFLRRYVMKHDKLAPELMAIFT 452
Query: 392 G 392
G
Sbjct: 453 G 453
>AT5G64950.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:25953887-25955062 FORWARD
LENGTH=391
Length = 391
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 154/309 (49%), Gaps = 17/309 (5%)
Query: 85 NLKDPDGPNAVLDLLKNYGFSKTQVAKLVGKHPLLLFANAKRTLLPKLKFLHSIGVSTTD 144
NLK + P +V+ +LK+Y FS TQ+ K + HP ++F N ++ L PKL+F IG + +
Sbjct: 64 NLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSG 123
Query: 145 MPQVLLANHILLVRSLKNCIVPRYKILRGVLRNDQEAARALRNAPRAFTYCD--IMNK-- 200
+ + + N ++ SL ++P +IL+ ++ E + P + C ++++
Sbjct: 124 LGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHE------DLPVILSRCGWLLLSRDP 177
Query: 201 ---LVQNIEFLRQFGVPQSSISLMVVNFPSATYIHHSKFVEAVKTVKEIGLDPSKTTFVM 257
L+ NI +L G+ S ++ ++ P + K V ++G + V
Sbjct: 178 NLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVH 237
Query: 258 AVQVLLGLSQAARESRFEFFHRRGWDREMTLQAFRKFPNFMKLSQETVAKKMSYMVNDMG 317
AV L LS+ + + + F G+ + R+ P ++ S++ + + + MG
Sbjct: 238 AVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMG 297
Query: 318 WTLEDVAGFPPVLGFSLEKRIIPRLSVIKVLKSKGLIKNDMHLSSFMCS----SEEVFLK 373
E +A P VL ++LEKR+IPRL V+++L+ KGL+ + M +EE FL+
Sbjct: 298 LEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLE 357
Query: 374 KFVINFQDD 382
K+V+ F D+
Sbjct: 358 KYVVRFGDE 366
>AT1G62150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22970198-22971589 REVERSE
LENGTH=463
Length = 463
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 187/408 (45%), Gaps = 92/408 (22%)
Query: 54 DYCKGDTYTISYLTKSCGLSPDSAKKLSIGLNLKDPDGPNAVLDLLKNYGFSKTQVAKLV 113
D KG+ +T+SYL S GL+ A+ +S+ ++ ++ P+ VL+LL+++ F+ +Q++ ++
Sbjct: 52 DSRKGNNFTVSYLVDSLGLASKLAESISMKVSFENKGNPDTVLNLLRSHEFTDSQISSII 111
Query: 114 GKHPLLLFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHILLVRSLKNCIVPRYKILRG 173
+P LL A+A+ +L PKL + S G S++++ +++ +L I Y I++
Sbjct: 112 SDYPTLLVADAENSLGPKLLLMQSRGASSSELTEIVSKVPKILGMKGDKSIGRYYDIVKE 171
Query: 174 VLRNDQEA--ARALRNAPRAFTYCDIMNKLVQNIEFLRQFGVPQSSI-SLMVVNFPSATY 230
++ D+ + + + P NK ++N+ LR GVPQ + SL+ N
Sbjct: 172 IIEADKSSKFEKLCHSLPEGSKQ---ENK-IRNVLVLRDLGVPQRLLFSLLFSN------ 221
Query: 231 IHH-----SKFVEAVKTVKEIGLDPSKTTFVMAVQVLLGLSQAARESRFEFFHRRG---- 281
HH KF E++ V +G DP+ FV A+ ++ GLS E F + R G
Sbjct: 222 -HHVCCGKEKFEESLNKVVGMGFDPTTPKFVEALCIVYGLSDKRLEENFNVYKRFGLTVN 280
Query: 282 --WD-----------------------------REMTLQAFRKFPNFMKLSQETVAKKMS 310
W+ + L F+K P ++ S++ + M
Sbjct: 281 DVWELFKKCPAFLGYSENRIIQTFEALKRCGLCEDEVLSVFKKNPLCLRASEQQILNSME 340
Query: 311 YMVNDMGWTLED----VAGFPPVLGFS--------------------------------L 334
+ +G++ ++ V P +G+S +
Sbjct: 341 TFIG-LGFSRDEFVMMVKCLPQCIGYSAEMVKKKTEFVVKKMNWPLKVITLFPQVLGYSM 399
Query: 335 EKRIIPRLSVIKVLKSKGLIKNDM-HLSSFMCSSEEVFLKKFVINFQD 381
EKR +PR +VIK L SKGL+ +++ ++S + +++ FLK++V+ +
Sbjct: 400 EKRTVPRCNVIKALMSKGLLGSELPPMASVLACTDQTFLKRYVVEHDE 447
>AT1G56380.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:21101327-21102701 FORWARD
LENGTH=399
Length = 399
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 171/365 (46%), Gaps = 39/365 (10%)
Query: 62 TISYLTKSCGLSPDSAKKLSIGLNLKDPDGPNAVLDLLKNYGFSKTQVAKLVGKHPLLLF 121
T+SYL S G+ A+ + ++ KD PN+VL+LL++Y F+ +Q++ ++ P LL
Sbjct: 29 TVSYLVDSVGIPIKFAESILKEVSSKDKCNPNSVLNLLRSYDFTDSQISSIITTDPELLM 88
Query: 122 ANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHILLVRSLKNCIVPRYKILRGVL----RN 177
+A+ +L PKLKFL S + ++ + ++ +L + ++ Y ++ + R+
Sbjct: 89 EDAENSLCPKLKFLESREILSSRLNDIVTRVPKILRMEEEKSMITYYDFVKTITLTSSRS 148
Query: 178 D-----------QEAARALRN------APRAF----TYCDIMNK-LVQNIEFLRQFGVPQ 215
D + + R + AP+ F C + N+ L + + + G
Sbjct: 149 DFYKVCELYPYIESSIRKVIEMGFDPFAPKIFDATVVVCTLSNETLEERVNIYKTLGFDV 208
Query: 216 SSISLMVVNFPSATYIHHSKFVEAVKTVKEIGLDPSK--TTFVMAVQVLLGLSQAARESR 273
+ M P+ I K ++ +T+K+ GL + + F + Q + S+
Sbjct: 209 RDVWEMFKKCPTFLNISEKKITQSFETLKKCGLVEEEVISMFQKSPQC-IDFSELDITQN 267
Query: 274 FEFFHRRGWDREMTLQAFRKFPNFMKLSQETVAKKMSYMVND--------MGWTLEDVAG 325
FEF G E L F+++P + S++ + + + M E V
Sbjct: 268 FEFLKGCGLVEEEVLSMFKRYPQCIGFSEKKILNAVETFLGQGFSKDEVMMMVNREGVVS 327
Query: 326 FPPVLGFSLEKRIIPRLSVIKVLKSKGLIKNDM-HLSSFMCSSEEVFLKKFVINFQDDAP 384
P VL FS+EK I+PR +VIK L SK L+K ++ + S + +EVFL+++V + DD
Sbjct: 328 IPVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVSSMFSVLICPDEVFLERYV-SKHDDQE 386
Query: 385 LLTDV 389
L+ ++
Sbjct: 387 LVDEL 391
>AT1G56380.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:21101374-21102701 FORWARD
LENGTH=388
Length = 388
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 171/365 (46%), Gaps = 39/365 (10%)
Query: 62 TISYLTKSCGLSPDSAKKLSIGLNLKDPDGPNAVLDLLKNYGFSKTQVAKLVGKHPLLLF 121
T+SYL S G+ A+ + ++ KD PN+VL+LL++Y F+ +Q++ ++ P LL
Sbjct: 18 TVSYLVDSVGIPIKFAESILKEVSSKDKCNPNSVLNLLRSYDFTDSQISSIITTDPELLM 77
Query: 122 ANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHILLVRSLKNCIVPRYKILRGVL----RN 177
+A+ +L PKLKFL S + ++ + ++ +L + ++ Y ++ + R+
Sbjct: 78 EDAENSLCPKLKFLESREILSSRLNDIVTRVPKILRMEEEKSMITYYDFVKTITLTSSRS 137
Query: 178 D-----------QEAARALRN------APRAF----TYCDIMNK-LVQNIEFLRQFGVPQ 215
D + + R + AP+ F C + N+ L + + + G
Sbjct: 138 DFYKVCELYPYIESSIRKVIEMGFDPFAPKIFDATVVVCTLSNETLEERVNIYKTLGFDV 197
Query: 216 SSISLMVVNFPSATYIHHSKFVEAVKTVKEIGLDPSK--TTFVMAVQVLLGLSQAARESR 273
+ M P+ I K ++ +T+K+ GL + + F + Q + S+
Sbjct: 198 RDVWEMFKKCPTFLNISEKKITQSFETLKKCGLVEEEVISMFQKSPQC-IDFSELDITQN 256
Query: 274 FEFFHRRGWDREMTLQAFRKFPNFMKLSQETVAKKMSYMVND--------MGWTLEDVAG 325
FEF G E L F+++P + S++ + + + M E V
Sbjct: 257 FEFLKGCGLVEEEVLSMFKRYPQCIGFSEKKILNAVETFLGQGFSKDEVMMMVNREGVVS 316
Query: 326 FPPVLGFSLEKRIIPRLSVIKVLKSKGLIKNDM-HLSSFMCSSEEVFLKKFVINFQDDAP 384
P VL FS+EK I+PR +VIK L SK L+K ++ + S + +EVFL+++V + DD
Sbjct: 317 IPVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVSSMFSVLICPDEVFLERYV-SKHDDQE 375
Query: 385 LLTDV 389
L+ ++
Sbjct: 376 LVDEL 380
>AT1G62110.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22958094-22959482 REVERSE
LENGTH=462
Length = 462
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 140/288 (48%), Gaps = 10/288 (3%)
Query: 54 DYCKGDTYTISYLTKSCGLSPDSAKKLSIGLNLKDPDGPNAVLDLLKNYGFSKTQVAKLV 113
D K +T+SYL S GL+ A+ +S ++ + P+ VL L ++YGF+ +Q++ ++
Sbjct: 46 DGRKVKNFTVSYLVDSLGLATKLAESISKKVSFVNKGNPDLVLSLFRSYGFTNSQISSII 105
Query: 114 GKHPLLLFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHILLVRSLKNCIVPRYKILRG 173
+P LL +A+++L KL+FL S G S+ ++ Q++ +L + Y ++
Sbjct: 106 TDYPRLLLIDAEKSLDIKLQFLESRGASSPELTQIVSTVPKILGMKEGKSLGRYYDFVKE 165
Query: 174 VLRNDQEAARALRNAPRAFTYCDIMNKLVQNIEFLRQFGVPQSSI-SLMVVNFPSATYIH 232
++ D+ + P + ++N+ LR GVPQ + SL++ + +
Sbjct: 166 IIEADKSSKYETLCQP--LPEANRQGNKIRNVSVLRDLGVPQKLLFSLLISD--AQPVCG 221
Query: 233 HSKFVEAVKTVKEIGLDPSKTTFVMAVQVLLGLSQAARESRFEFFHRRGWDREMTLQAFR 292
F E++K V E+G DP+ + FV A++ + + E R + G+ E F+
Sbjct: 222 KENFEESLKKVVEMGFDPTTSKFVQALRAVYRFTDKTIEERVNVYKGFGFAVEDVWAMFK 281
Query: 293 KFPNFMKLSQETVAKKMSYMVNDMGWTLEDVAG----FPPVLGFSLEK 336
K P F+ S++ + + + + G ++V +P +G S +K
Sbjct: 282 KCPYFLNSSEKKIGQTIETL-KKCGLLEDEVISVLKKYPQCIGTSEQK 328
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 5/189 (2%)
Query: 203 QNIEFLRQFGVPQSSISLMVVNFPSATYIHHSKFVEAVKTVKEIGLDPSKTTFVMA-VQV 261
+ + + FG + M P K + ++T+K+ GL + V+
Sbjct: 261 ERVNVYKGFGFAVEDVWAMFKKCPYFLNSSEKKIGQTIETLKKCGLLEDEVISVLKKYPQ 320
Query: 262 LLGLSQAARESRFEFFHRRGWDREMTLQAFRKFPNFMKLSQETVAKKMSYMVNDMGWTLE 321
+G S+ + E F G+ R+ + ++FP + LS ETV KK+ ++V M W L+
Sbjct: 321 CIGTSEQKILNSIEIFLGLGFSRDEFITMVKRFPQCLILSAETVKKKIEFVVKKMNWPLK 380
Query: 322 DVAGFPPVLGFSLEKRIIPRLSVIKVLKSKGLIKNDMH----LSSFMCSSEEVFLKKFVI 377
DV P VLG++LEKR +PR +VI+ L SK L+ + +SS + ++E+FLK++V
Sbjct: 381 DVVSNPTVLGYNLEKRTVPRCNVIEALMSKRLLGDTGSELPPMSSVLVCTDELFLKRYVR 440
Query: 378 NFQDDAPLL 386
N D +L
Sbjct: 441 NHGDKELVL 449
>AT5G23930.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:8074625-8075998 REVERSE
LENGTH=457
Length = 457
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 170/399 (42%), Gaps = 60/399 (15%)
Query: 54 DYCKGDTYTISYLTKSCGLSPDSAKKLSIGLNLKDPDGPN-------------------- 93
D K T+T+SYL S GL+ A+ +S+ N + P+
Sbjct: 49 DERKRKTFTVSYLIDSLGLTTKLAESISMKANFDEKGNPDSVLKLLRSYGFKDSQISSII 108
Query: 94 ----------------AVLDLLKNYGFSKTQVAKLVGKHPLLLFANAKRTLLPKLKFLHS 137
A L LK G S +++ ++V K P +L + + ++
Sbjct: 109 STYPRFLIENPEKTLRAKLHFLKLNGASSSELTEIVSKVPKILGKRGGKWISHYYDYVKE 168
Query: 138 I------GVSTTDMPQVLLANHILLVRSLK-------NCIVPRYKILRGVLRNDQEAARA 184
I S++ Q ++ ++R L N ++ R K + G R ++ +
Sbjct: 169 ILQDQDSSSSSSKRKQTNRNRNVSVLRKLGVPQRLLLNLLISRAKPVCGKERFEESVKKI 228
Query: 185 LRNA--PRA-------FTYCDIMNKLVQN-IEFLRQFGVPQSSISLMVVNFPSATYIHHS 234
+ P++ + + ++ +K ++ + + G+ + + + +P +
Sbjct: 229 VEMGFDPKSPKFVNALYVFYELSDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFSLKYSEK 288
Query: 235 KFVEAVKTVKEIGLDPSKTTFVMA-VQVLLGLSQAARESRFEFFHRRGWDREMTLQAFRK 293
++ +T+K +GL + V+ +G S+ + F G+ ++ L ++
Sbjct: 289 NIIQKFETLKRVGLTKEEVCLVVKKYPECVGTSEEKIVKSVKTFLELGFTKDEVLMIIKR 348
Query: 294 FPNFMKLSQETVAKKMSYMVNDMGWTLEDVAGFPPVLGFSLEKRIIPRLSVIKVLKSKGL 353
P + L+ ++V KK ++V MGW L+ VA P VLGFSLEK ++PR +VIK L S GL
Sbjct: 349 HPQCIGLAADSVKKKTEFLVKTMGWPLKVVASTPIVLGFSLEKFVLPRCNVIKALMSNGL 408
Query: 354 IKNDMHLSSFMCSSEEVFLKKFVINFQDDAPLLTDVYKG 392
I +SS + S + FLK FV QD P L ++ G
Sbjct: 409 IGEMPAISSVLTSPKLKFLKLFVEKHQDVLPELNSIFTG 447
>AT2G21710.1 | Symbols: EMB2219 | Mitochondrial transcription
termination factor family protein | chr2:9270886-9273307
FORWARD LENGTH=641
Length = 641
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 103/254 (40%), Gaps = 41/254 (16%)
Query: 96 LDLLKNYGFSKTQVAKLVGKHPLLLFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHIL 155
++ LK +G S +V +L+ P L+ + + P +K+ + +G+ M ++L+ IL
Sbjct: 356 INYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPIL 415
Query: 156 LVRSLKNCIVPRYKILRGVLRNDQEAARALRNAPRAFTYCDIMNKLVQNIEFLRQFGVPQ 215
L+ I P+ + FL++ G+P
Sbjct: 416 YCIDLEKTIAPK-------------------------------------VRFLQEMGIPN 438
Query: 216 SSISLMVVNFPSATYIHHSKFVEAVKT--VKEIGLDPSKTTFVMAVQ-VLLGLSQAAR-E 271
+I M+V FPS K + V + G+ V+A+ LLG S + E
Sbjct: 439 EAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLE 498
Query: 272 SRFEFFHRRGWDREMTLQAFRKFPNFMKLSQETVAKKMSYMVNDMGWTLEDVAGFPPVLG 331
++ G + FP ++ + + + K Y+ M L+D+ FP
Sbjct: 499 PNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFS 558
Query: 332 FSLEKRIIPRLSVI 345
+SLE+RIIPR +++
Sbjct: 559 YSLERRIIPRHTIM 572
>AT2G36000.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr2:15117181-15118182 FORWARD
LENGTH=333
Length = 333
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 243 VKEIG-LDPSKTTFVMAVQVLLGLSQAARESRFEFFHRRGWDREMTLQAFRKFPNFMKLS 301
++ IG LDP K T++++ V L R ++F + G+ R F++FP S
Sbjct: 188 LQRIGILDPHKHTYLLSCSVDNKLV-----PRIDYFEKLGFSRRSATAMFKRFPQLFNYS 242
Query: 302 -QETVAKKMSYMVNDMGWTLEDVAGFPPVLGFSLEKRIIPR 341
E K+ Y++ +MG + +V FP FSLE RI PR
Sbjct: 243 IAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPR 283
>AT2G36000.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr2:15117181-15118333 FORWARD
LENGTH=318
Length = 318
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 243 VKEIG-LDPSKTTFVMAVQVLLGLSQAARESRFEFFHRRGWDREMTLQAFRKFPNFMKLS 301
++ IG LDP K T++++ V L R ++F + G+ R F++FP S
Sbjct: 188 LQRIGILDPHKHTYLLSCSVDNKLV-----PRIDYFEKLGFSRRSATAMFKRFPQLFNYS 242
Query: 302 -QETVAKKMSYMVNDMGWTLEDVAGFPPVLGFSLEKRIIPR 341
E K+ Y++ +MG + +V FP FSLE RI PR
Sbjct: 243 IAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPR 283
>AT5G06810.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:2108493-2112256 FORWARD
LENGTH=1141
Length = 1141
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 132/314 (42%), Gaps = 27/314 (8%)
Query: 85 NLKDPDGPNA-----VLDLLKNYGFSKTQVAKLVGKHPLLLFANAKRTLLPKLKFLHSIG 139
NL D +GP+ VL LL+ F + ++ L+ P LLF N+ + + F +G
Sbjct: 261 NLSD-EGPDWSSVHRVLSLLREICFDEEKLYGLIRNCPSLLFENSGKWTGILVGFETKLG 319
Query: 140 VSTTDMPQVLLANHILLVRSLKNCIVPRYKILRGVLRNDQEAARALRNAPRAFTYCDIMN 199
S +++ + ++ V + + + L+ + D E + R+ C
Sbjct: 320 ASRSELCSLFQKFPLIQVEKCVSNLRQCFLFLKEIEMEDDEIHKVFRSHSWWLGSC---- 375
Query: 200 KLVQNIEFLRQFGVPQSSISLMVVNFPSAT--YIHHSKFVEAVKTVKEIGLDPSKTTFVM 257
KL + L ++ + ++ P + SK T +I KT F++
Sbjct: 376 KLKKTSSLLVFLKAGKTRVCQVIQENPEEMKKWTMGSKIQPLPATNVDIESKSMKTQFLL 435
Query: 258 -------------AVQVLLGLSQAARESRFEFFHRRGWDREMTLQAFRKFPNFMKLSQET 304
A++ G RE RF G+ ++ + P + + +
Sbjct: 436 DLGYKENSEEMETAMKNFRGKGSELRE-RFNVLVSLGFTKKDVKDMVKACPTMLSQTCDI 494
Query: 305 VAKKMSYMVNDMGWTLEDVAGFPPVLGFSLEKRIIPRLSVIKVLKSKGLIKNDMHLSSFM 364
+ K++Y++ ++G+ L + FP L F+L+ R+ R ++ L+++G + + +S+ +
Sbjct: 495 LESKVNYLIKELGYPLSTLVDFPSCLKFTLQ-RMKLRFAMFSWLQARGKVDRKIKVSTML 553
Query: 365 CSSEEVFLKKFVIN 378
S+++F+ F+ N
Sbjct: 554 ACSDKIFVMSFMRN 567
>AT5G54180.1 | Symbols: PTAC15 | plastid transcriptionally active 15
| chr5:21988544-21990183 FORWARD LENGTH=500
Length = 500
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 129/321 (40%), Gaps = 52/321 (16%)
Query: 93 NAVLDLLKNYGFSKTQVAKLVGKHPL--LLFANAKRTLLPKLKFLHSIGVSTTDMPQVLL 150
N + LL +G K +++ ++ K L LL+ + + + FL G ++
Sbjct: 182 NQKVRLLLLHGIPKEKISHVLNKVYLNKLLYQKSVEDIERLISFLEPFGGIG-----IIA 236
Query: 151 ANHILLVRSLKNCIVPRYKILRGVLRNDQEA-ARALRNAPRAFTYCDIMNKLVQNIEFLR 209
++L L + ++PR +R + D A LR P +Y + + +EFL+
Sbjct: 237 RRPVILNSDLDSQLIPRVDFIRNLSGEDDFATGTVLRRLPAILSYS--VEHMNGQVEFLK 294
Query: 210 QF-GVPQSSISLMVVNFPSA-TYIHHSKFVEAVKTVKEIGLD-PSKTTFVMAVQVLLGLS 266
F G+ + +V FP+ + K ++ +KE G D P F+ ++L LS
Sbjct: 295 SFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSPGMFKFLSKAPLILALS 354
Query: 267 QAARESRFEFFHRRGWDREMTLQAF----------------------------------R 292
+ + F + G+ AF
Sbjct: 355 ENNLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMST 414
Query: 293 KFPNFMKLSQETVAKKMSYMVNDMGWTLEDVAGFPPVLGFSLEKRIIPRLSVIKVLKSKG 352
K P ++ + ++ +K+ Y++ MG +E++ FP LG+ L+ RI R + LKS+G
Sbjct: 415 KHPQVLQYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYE--EKLKSRG 472
Query: 353 LIKNDMHLSSFMCSSEEVFLK 373
+M L+ + S E F K
Sbjct: 473 ---ENMSLNKLLTVSAERFSK 490
>AT4G14605.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr4:8378815-8380564 FORWARD
LENGTH=493
Length = 493
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 22/242 (9%)
Query: 130 PKLKFLHSIGVSTTDMPQVLLANHILLVRSLKNCIVPRYKILRGVLRNDQEAARALRNAP 189
P ++FL +G+ +D+P +L + SL + + P L + + + A+ + P
Sbjct: 234 PVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFP 293
Query: 190 RAFTYCDIMNKLVQNIEFLRQFGVPQSSISLMVVNFPS-ATYIHHSKFVEAVKTVKEIGL 248
TY KL +EFL Q G+ + I ++ P+ +Y K ++ + + +
Sbjct: 294 AILTYS--RQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNV 351
Query: 249 DPSKTTFVMAVQVLL-------GLS-QAARESRFEFFHRRGWDREMTLQAFRKFPNFMKL 300
D V VLL GLS ++ + EFF +G+ + ++
Sbjct: 352 D---------VAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTF 402
Query: 301 S-QETVAKKMSYMVNDMGWTLEDVAGFPPVLGFSLEKRIIPRLSVIKVLKSKGLIKNDMH 359
S +E V K Y M + ++ FP G+SL++RI PR +++ + L+ +
Sbjct: 403 SLKENVMPKWDYF-QTMDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLS 461
Query: 360 LS 361
LS
Sbjct: 462 LS 463
>AT2G44020.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr2:18217737-18219260 REVERSE
LENGTH=507
Length = 507
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 119/290 (41%), Gaps = 10/290 (3%)
Query: 95 VLDLLKNYGFSKTQVAKLVGKHPLLLFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHI 154
V+ L+ K + ++ K+P LL + T+ + +L SIGVS D+ ++
Sbjct: 183 VVKFLRGLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPY 242
Query: 155 LLVRSLKNCIVPRYKILRGVLRNDQEAARALRNAPRAFTYCDIMNKLVQNIEFLRQFGVP 214
LL + I P L + + AR L Y ++ + N++ L FGV
Sbjct: 243 LLGMRVGTMIKPLVDYLISIGLPKKIVARMLEKRSYIVGY-NLEETVKPNVDCLISFGVK 301
Query: 215 QSSISLMVVNFPSATYIHHSKFVEAVKTVKEIGLDPSKTTFVMAVQ---VLLGLSQAARE 271
+ + L++ +P + + + + L F V+ ++ L Q
Sbjct: 302 KELLPLLIAQYPQILGLPVKAKMSTQQYFFSLKLKIDPEGFARVVEKMPQIVSLKQNVIM 361
Query: 272 SRFEFFHRRGWDREMTLQAFRKFPNFMKLSQETVAKKMSYMVNDMGWTLEDVAGFPPVLG 331
EF R + E + + P + E + + +MG ++++ +P
Sbjct: 362 KPIEFLLGRAFQVEDIAKMVVRCPQILCSRVELMKNSYYFYKTEMGRPMKELVEYPEYFT 421
Query: 332 FSLEKRIIPRLSVIKVLKSKGLIKNDMHLSSFMCSSEEVFLKKFVINFQD 381
+SLE RI PR + L+SKG+ + L+ F+ S++ F ++ NF D
Sbjct: 422 YSLESRIKPRY---QKLQSKGIRSS---LNWFLNCSDQRFEERLQGNFID 465
>AT1G74120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:27871923-27873260 REVERSE
LENGTH=445
Length = 445
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%)
Query: 273 RFEFFHRRGWDREMTLQAFRKFPNFMKLSQETVAKKMSYMVNDMGWTLEDVAGFPPVLGF 332
R + + G R + K P + E + KK+ ++ N MG+ + +A P LG
Sbjct: 288 RVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADVPEYLGV 347
Query: 333 SLEKRIIPRLSVIKVLKSKGLIKNDMHLSSFMCSSEEVFLKKFVINFQD 381
+L+K+I+PR +VI LK KG + D+ L + S + F +V+ + +
Sbjct: 348 NLQKQIVPRYNVIDYLKLKGGLGCDIGLKGLIKPSMKRFYNLYVMPYPE 396
>AT3G60400.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr3:22329093-22330769 FORWARD
LENGTH=558
Length = 558
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 117/295 (39%), Gaps = 27/295 (9%)
Query: 103 GFSKTQVAKLVGKHPLLLFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHILLVRSLKN 162
G ++ +L+ ++ L ++ L+ K + GVS D ++L N ++ L+
Sbjct: 242 GCENEEMWELMCRNKSLFLEYSEEALMNKAGYFCRFGVSKEDAALLILRNPAIMNFDLEK 301
Query: 163 CIVPRYKILRGV-LRNDQEAARA-----------LRNAPRAFTYCDIMNKLVQ-----NI 205
++ +L+ LR D+ A A L+N P D+ ++ N
Sbjct: 302 PVISVTGMLKHFGLRQDEVDAVAQKYPYVFGRNQLKNLPYVLRAIDLHERIFDILKNGNH 361
Query: 206 EFLRQFGVPQSSISLMVVNFPSATYIHHSKF----VEAVKTVKEIGLDPSKTTFVMAVQV 261
L + + L + +S+ ++ + + EIG + T ++V
Sbjct: 362 HLLASYTLMDPDEDLEREYQEGLEELQNSRTKRHNIQKLDFLHEIGFGENGIT----MKV 417
Query: 262 LLGLSQAARE--SRFEFFHRRGWDREMTLQAFRKFPNFMKLSQETVAKKMSYMVNDMGWT 319
L + A E RF+ G R P + ++ K+ ++ +MG +
Sbjct: 418 LQHVHGTAVELHDRFQILLNSGIIFSKICMLIRSAPKILNQKPHSIQDKLRFLCGEMGDS 477
Query: 320 LEDVAGFPPVLGFSLEKRIIPRLSVIKVLKSKGLIKNDMHLSSFMCSSEEVFLKK 374
L+ + FP L F LE RI PR K L KG + ++S + +SE+ F+ +
Sbjct: 478 LDYLEVFPAYLCFDLENRISPRFRFHKWLVEKGFSEKSYSIASIVATSEKAFIAR 532
>AT1G78930.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:29678285-29680648 REVERSE
LENGTH=591
Length = 591
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 96 LDLLKNYGFSKTQVAKLVGKHPLLLFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHIL 155
L L +G S T +++ K+P L +A +T+LP+LK+L IG+S ++ ++ +
Sbjct: 446 LIFLTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPRLKYLMEIGISEREIAFMIRKFSPI 505
Query: 156 LVRSLKNCIVPRYKILRGVLRNDQEAARALRNAPRAFTY 194
L S+ + P+++ L + + ++ R + PR F+Y
Sbjct: 506 LGYSIDKVLRPKFEFL---VNSMEKPVREVIEYPRYFSY 541
>AT4G02990.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr4:1322158-1323783 FORWARD
LENGTH=541
Length = 541
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/250 (18%), Positives = 106/250 (42%), Gaps = 4/250 (1%)
Query: 95 VLDLLKNYGFSKTQVAKLVGKHPLLLFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHI 154
V+ L+ + V +++ ++P +L + T+ + +L IGV+ ++ +L
Sbjct: 218 VVKYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPE 277
Query: 155 LLVRSLKNCIVPRYKILRGVLRNDQEAARALRNAPRAFTYCDIMNKLVQNIEFLRQFGVP 214
+L + I P + L + AAR + P + ++ + + N++ L+ F V
Sbjct: 278 ILGMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHILGF-ELDDTVKPNVQILQDFNVR 336
Query: 215 QSSISLMVVNFPSATYIHHSKFVEAVKTV--KEIGLDPSK-TTFVMAVQVLLGLSQAARE 271
++S+ ++ +P I ++ + + I L+P + + + + LS++
Sbjct: 337 ETSLPSIIAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPML 396
Query: 272 SRFEFFHRRGWDREMTLQAFRKFPNFMKLSQETVAKKMSYMVNDMGWTLEDVAGFPPVLG 331
+F + G+ + T + P + L+ + Y +M L+D+ FP
Sbjct: 397 KHIDFLTKCGFSIDQTREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFT 456
Query: 332 FSLEKRIIPR 341
+ LE + PR
Sbjct: 457 YGLESTVKPR 466
>AT5G55580.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:22515601-22517408 FORWARD
LENGTH=496
Length = 496
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Query: 62 TISYLTKSCGLSPDSAKKL-----SIGLNLKDPDGPNAVLDLLKNYGFSKTQVAKLVGKH 116
TI YL + G+ K+ I + D + L K G + V K+V KH
Sbjct: 294 TIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKH 353
Query: 117 PLLLFANAKRTLLPKLKFLHSIGVSTTDMPQVLLANHILLVRSLKNCIVPRYKILRGVLR 176
P LL + LP++ FL SIG+ +D+ +VL + +L SL++ + P+Y L L
Sbjct: 354 PQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELN 413
Query: 177 ND 178
N+
Sbjct: 414 NE 415