Miyakogusa Predicted Gene

Lj0g3v0204789.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0204789.1 Non Chatacterized Hit- tr|I1L4I0|I1L4I0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44021
PE,73.02,3e-19,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,NODE_58769_length_493_cov_16.022312.path2.1
         (64 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G16060.1 | Symbols:  | ATP binding microtubule motor family p...   112   7e-26
AT3G16630.2 | Symbols: ATKINESIN-13A, KINESIN-13A | P-loop conta...    75   7e-15
AT3G16630.1 | Symbols: ATKINESIN-13A, KINESIN-13A | P-loop conta...    75   7e-15
AT4G15885.1 | Symbols:  | kinesin motor protein-related | chr4:9...    72   7e-14

>AT3G16060.1 | Symbols:  | ATP binding microtubule motor family
           protein | chr3:5447503-5451196 FORWARD LENGTH=684
          Length = 684

 Score =  112 bits (279), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 51/64 (79%), Positives = 60/64 (93%)

Query: 1   MNIVREEMNLLVEADQPGNQLDDYITKLNTILSQKAAAVMELQTRLANFQKRLKEHNVLV 60
           MNIV+EEMNLLVEADQPGNQLD YI++LNTILSQKAA +++LQ RLA+FQKRL+EHNVLV
Sbjct: 620 MNIVKEEMNLLVEADQPGNQLDGYISRLNTILSQKAAGILQLQNRLAHFQKRLREHNVLV 679

Query: 61  SSAG 64
           S+ G
Sbjct: 680 STTG 683


>AT3G16630.2 | Symbols: ATKINESIN-13A, KINESIN-13A | P-loop
           containing nucleoside triphosphate hydrolases
           superfamily protein | chr3:5662660-5667261 REVERSE
           LENGTH=794
          Length = 794

 Score = 75.5 bits (184), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 34/59 (57%), Positives = 46/59 (77%)

Query: 1   MNIVREEMNLLVEADQPGNQLDDYITKLNTILSQKAAAVMELQTRLANFQKRLKEHNVL 59
           M IVREEM LL E DQPG+ +++Y+T+L+ +LS+KAA ++ LQ RLA FQ RLKE  +L
Sbjct: 729 MEIVREEMKLLAEVDQPGSMIENYVTQLSFVLSRKAAGLVSLQARLARFQHRLKEQEIL 787


>AT3G16630.1 | Symbols: ATKINESIN-13A, KINESIN-13A | P-loop
           containing nucleoside triphosphate hydrolases
           superfamily protein | chr3:5662660-5667261 REVERSE
           LENGTH=794
          Length = 794

 Score = 75.5 bits (184), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 34/59 (57%), Positives = 46/59 (77%)

Query: 1   MNIVREEMNLLVEADQPGNQLDDYITKLNTILSQKAAAVMELQTRLANFQKRLKEHNVL 59
           M IVREEM LL E DQPG+ +++Y+T+L+ +LS+KAA ++ LQ RLA FQ RLKE  +L
Sbjct: 729 MEIVREEMKLLAEVDQPGSMIENYVTQLSFVLSRKAAGLVSLQARLARFQHRLKEQEIL 787


>AT4G15885.1 | Symbols:  | kinesin motor protein-related |
           chr4:9016451-9016978 REVERSE LENGTH=113
          Length = 113

 Score = 72.0 bits (175), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 45/59 (76%)

Query: 1   MNIVREEMNLLVEADQPGNQLDDYITKLNTILSQKAAAVMELQTRLANFQKRLKEHNVL 59
           M IV EEM LL + D+PG+ +D+Y+T+L+ +LS+KAA ++ LQ RLA FQ RLKE  +L
Sbjct: 48  MEIVHEEMKLLAKVDRPGSMIDNYVTQLSFVLSRKAAGLVSLQARLARFQHRLKEQEIL 106