Miyakogusa Predicted Gene

Lj0g3v0203889.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0203889.1 Non Chatacterized Hit- tr|A3BWF3|A3BWF3_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,59.42,5e-18,AF0625-like,NULL; seg,NULL;
tRNA_deacylase,D-aminoacyl-tRNA deacylase,CUFF.13022.1
         (115 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G03800.1 | Symbols: GEK1 | D-aminoacyl-tRNA deacylases | chr2...   165   6e-42

>AT2G03800.1 | Symbols: GEK1 | D-aminoacyl-tRNA deacylases |
           chr2:1156782-1158695 FORWARD LENGTH=317
          Length = 317

 Score =  165 bits (417), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 78/116 (67%), Positives = 90/116 (77%), Gaps = 1/116 (0%)

Query: 1   MAQLVWEXXXXXXXTDIGNWGRENDKKKVLLGIGGGHYAPRHMDVVLKDDVWVGHLLSGY 60
           MA L+WE        ++G W  E  K+KVLLGIGGGHYAPRHMD+ LKDD+WVGHLLSGY
Sbjct: 180 MALLMWEGLGLGGSEEVGKWKSETGKRKVLLGIGGGHYAPRHMDIALKDDIWVGHLLSGY 239

Query: 61  SLPMEDPNNAKGER-NTAIGGTWKESIKAAYEASKSAFPGGEILAHLDHKSFKGWQ 115
           SLPMEDP   K       IGG W++SIKAA+EA+K++FPGGEILAHLDHKSFKGWQ
Sbjct: 240 SLPMEDPTQTKTTPGENYIGGNWRQSIKAAFEATKASFPGGEILAHLDHKSFKGWQ 295