Miyakogusa Predicted Gene

Lj0g3v0203809.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0203809.1 tr|K1REP9|K1REP9_CRAGI Leucine carboxyl
methyltransferase 2 OS=Crassostrea gigas PE=4
SV=1,43.9,3e-19,SUBFAMILY NOT NAMED,NULL; LEUCINE CARBOXYL
METHYLTRANSFERASE,Leucine carboxyl methyltransferase, euk,CUFF.12990.1
         (124 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02100.2 | Symbols:  | Leucine carboxyl methyltransferase | c...   182   5e-47
AT1G02100.1 | Symbols:  | Leucine carboxyl methyltransferase | c...   182   5e-47
AT1G02100.3 | Symbols:  | Leucine carboxyl methyltransferase | c...   182   5e-47

>AT1G02100.2 | Symbols:  | Leucine carboxyl methyltransferase |
           chr1:389876-392293 FORWARD LENGTH=306
          Length = 306

 Score =  182 bits (462), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 91/119 (76%), Positives = 99/119 (83%), Gaps = 8/119 (6%)

Query: 5   VADSRGSSNTAAVQATNDDASASKLSCVKKGYMKDDYIHLFVRRPVRRSPIINRGYFARW 64
           +A+SR  SN AAVQATNDDASASKLSCVKKGYMKDDY+HLFV+RPVRRSPIINRGYF+RW
Sbjct: 1   MAESR--SNRAAVQATNDDASASKLSCVKKGYMKDDYVHLFVKRPVRRSPIINRGYFSRW 58

Query: 65  AAIRKLLYQFLDAEEKTGGDAPTKKQILSLGAGFDTTYFQLQDEGKAPYLYVEVDFKEV 123
           AA RKL+ QFL           +KKQILSLGAGFDTTYFQL DEG  P LYVE+DFKEV
Sbjct: 59  AAFRKLMSQFL------LSGTSSKKQILSLGAGFDTTYFQLLDEGNGPNLYVELDFKEV 111


>AT1G02100.1 | Symbols:  | Leucine carboxyl methyltransferase |
           chr1:389876-392448 FORWARD LENGTH=332
          Length = 332

 Score =  182 bits (461), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 91/119 (76%), Positives = 100/119 (84%), Gaps = 8/119 (6%)

Query: 5   VADSRGSSNTAAVQATNDDASASKLSCVKKGYMKDDYIHLFVRRPVRRSPIINRGYFARW 64
           +A+SR  SN AAVQATNDDASASKLSCVKKGYMKDDY+HLFV+RPVRRSPIINRGYF+RW
Sbjct: 1   MAESR--SNRAAVQATNDDASASKLSCVKKGYMKDDYVHLFVKRPVRRSPIINRGYFSRW 58

Query: 65  AAIRKLLYQFLDAEEKTGGDAPTKKQILSLGAGFDTTYFQLQDEGKAPYLYVEVDFKEV 123
           AA RKL+ QFL +         +KKQILSLGAGFDTTYFQL DEG  P LYVE+DFKEV
Sbjct: 59  AAFRKLMSQFLLS------GTSSKKQILSLGAGFDTTYFQLLDEGNGPNLYVELDFKEV 111


>AT1G02100.3 | Symbols:  | Leucine carboxyl methyltransferase |
           chr1:389876-392448 FORWARD LENGTH=332
          Length = 332

 Score =  182 bits (461), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 91/119 (76%), Positives = 100/119 (84%), Gaps = 8/119 (6%)

Query: 5   VADSRGSSNTAAVQATNDDASASKLSCVKKGYMKDDYIHLFVRRPVRRSPIINRGYFARW 64
           +A+SR  SN AAVQATNDDASASKLSCVKKGYMKDDY+HLFV+RPVRRSPIINRGYF+RW
Sbjct: 1   MAESR--SNRAAVQATNDDASASKLSCVKKGYMKDDYVHLFVKRPVRRSPIINRGYFSRW 58

Query: 65  AAIRKLLYQFLDAEEKTGGDAPTKKQILSLGAGFDTTYFQLQDEGKAPYLYVEVDFKEV 123
           AA RKL+ QFL +         +KKQILSLGAGFDTTYFQL DEG  P LYVE+DFKEV
Sbjct: 59  AAFRKLMSQFLLS------GTSSKKQILSLGAGFDTTYFQLLDEGNGPNLYVELDFKEV 111