Miyakogusa Predicted Gene

Lj0g3v0203629.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0203629.1 Non Chatacterized Hit- tr|I1L2F4|I1L2F4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20931
PE,69.41,0,FHA,Forkhead-associated (FHA) domain; seg,NULL; no
description,Forkhead-associated (FHA) domain; coi,gene.g15671.t1.1
         (147 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G20550.1 | Symbols: DDL | SMAD/FHA domain-containing protein ...   193   3e-50
AT2G24410.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...    61   2e-10

>AT3G20550.1 | Symbols: DDL | SMAD/FHA domain-containing protein  |
           chr3:7174695-7177600 REVERSE LENGTH=314
          Length = 314

 Score =  193 bits (491), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 99/153 (64%), Positives = 111/153 (72%), Gaps = 24/153 (15%)

Query: 18  PSFELSGNLAAETNRFRGVTLLFNEPPEARKPDVKWRLYVFRGGEVLNEVYMVDRAPLH- 76
           PSFELSG LA ETNR+RG+TLLFNEPPEARKP  +WRLYVF+ GE LNE   + R   + 
Sbjct: 161 PSFELSGKLAEETNRYRGITLLFNEPPEARKPSERWRLYVFKDGEPLNEPLCLHRQSCYL 220

Query: 77  ---------------SSPKQ--------VETEQPDGMLSKQVRPYIMDLGSTNKTFLNES 113
                          S  KQ        +E E+PDGM+ KQV+PYIMDLGSTNKT++NES
Sbjct: 221 FGRERRIADIPTDHPSCSKQHAVIQYREMEKEKPDGMMGKQVKPYIMDLGSTNKTYINES 280

Query: 114 PIEPQRYYELREKDTIKFGNSSREYVLLHENSA 146
           PIEPQRYYEL EKDTIKFGNSSREYVLLHENSA
Sbjct: 281 PIEPQRYYELFEKDTIKFGNSSREYVLLHENSA 313


>AT2G24410.1 | Symbols:  | BEST Arabidopsis thaliana protein match
          is: SMAD/FHA domain-containing protein
          (TAIR:AT3G20550.1); Has 194 Blast hits to 194 proteins
          in 92 species: Archae - 0; Bacteria - 0; Metazoa - 118;
          Fungi - 33; Plants - 30; Viruses - 0; Other Eukaryotes
          - 13 (source: NCBI BLink). | chr2:10379171-10379407
          REVERSE LENGTH=78
          Length = 78

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 35/52 (67%)

Query: 19 SFELSGNLAAETNRFRGVTLLFNEPPEARKPDVKWRLYVFRGGEVLNEVYMV 70
           FELS  LA ETN ++G+TLLFN P + RKP  +WRLY F+ GE L E   +
Sbjct: 9  CFELSRKLAEETNIYKGITLLFNNPVDNRKPKERWRLYHFKDGEPLKETLCI 60