Miyakogusa Predicted Gene

Lj0g3v0203509.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0203509.1 Non Chatacterized Hit- tr|A2ZTJ0|A2ZTJ0_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,66.67,4e-16,seg,NULL; TRNASYNTHTYR,Tyrosine-tRNA ligase;
SUBFAMILY NOT NAMED,NULL; TYROSYL-TRNA SYNTHETASE,Tyros,CUFF.12966.1
         (502 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G02660.1 | Symbols: emb2768 | Tyrosyl-tRNA synthetase, class ...   674   0.0  

>AT3G02660.1 | Symbols: emb2768 | Tyrosyl-tRNA synthetase, class Ib,
           bacterial/mitochondrial | chr3:570221-571756 REVERSE
           LENGTH=511
          Length = 511

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/517 (64%), Positives = 398/517 (76%), Gaps = 33/517 (6%)

Query: 5   FASRTILSSHSTKLFILPFK-------PPSSHASF----SIPFCFTR--------TTCTL 45
           FASR+IL   S + F+ P +       P  S A+F     +P  F+           C++
Sbjct: 9   FASRSILPICS-RTFLSPLRVASLLVFPEKSSATFFRRVQVPHLFSTSTTTLFSSVKCSI 67

Query: 46  QPLXXXXXXXXXXHGRSVIGILEQRGLLESITSDALRTASSNAIDAPLKVYCGFDPTAES 105
                           +V+ ILE+RGLLESITS+ LR+A S+   APL+VYCGFDPTAES
Sbjct: 68  HSTSSPETENQAVFRPNVVDILEERGLLESITSENLRSACSDPKVAPLRVYCGFDPTAES 127

Query: 106 LHLGNLLGIIVLSWFRRCGHNVVALIGGATARVGDPSGKSLERPELDVETLERNTAGIEN 165
           LHLGNLLGIIVLSWF+RCGH  V LIGGAT RVGDPSGKSLERPELD +TLE+N AGI  
Sbjct: 128 LHLGNLLGIIVLSWFQRCGHQAVGLIGGATGRVGDPSGKSLERPELDADTLEKNIAGITK 187

Query: 166 TIRTILGRAQNLNLEELSVGDGNLCDSSVVVLNNYDWWKEFSLLDFLKRVGKYARVGSMM 225
            I  ILG   +                S V+ NNYDWWK+ ++LDFL +VG++ARVG+MM
Sbjct: 188 IIIKILGSNPSPG-------------GSYVIFNNYDWWKDMTMLDFLNKVGRFARVGTMM 234

Query: 226 AKESVRKRLDSEQGMSYTEFTYQLLQGYDFLHLFQNEGVTVQIGGSDQWGNITAGTELVR 285
           AKESV+KRL+SEQGMSYTEFTYQLLQ YDFLHLF+NEG+ VQIGGSDQWGNITAGT+L+R
Sbjct: 235 AKESVKKRLESEQGMSYTEFTYQLLQAYDFLHLFKNEGINVQIGGSDQWGNITAGTDLIR 294

Query: 286 KILQVESAVYGFTFPLLLKSDGTKFGKSEDGAIWLSPSLLSPYKFYQYFFSVPDADVVRF 345
           KILQ E A YG TFPLLLK+DGTKFGKSEDGAIWLSPS+LSPYKFYQYFFSVPD DV+RF
Sbjct: 295 KILQAEEAAYGLTFPLLLKNDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDVDVIRF 354

Query: 346 LKILTFLDIEEIVKLEEEMVKPGYVPNTAQRRLAEEVTRFVHGEDGLKEALRATEALRPG 405
           LK LTFL ++EI  LE++M KPGYVPNTAQ +LAEEVTRFVHGE+GLKEA++ATEALRPG
Sbjct: 355 LKTLTFLSLDEIKILEDQMSKPGYVPNTAQIKLAEEVTRFVHGEEGLKEAIKATEALRPG 414

Query: 406 SETKLDWKTIEGIAEDVPSCSLAYDEVLNQSLVDLSVSSGLFDSKSSARRLLKQGGLYLN 465
           +ETKLDW  IE IAED+PSCSL  D V   S+VDLSVS+GLF+SKS+ARR+LKQGG Y+N
Sbjct: 415 AETKLDWNLIERIAEDIPSCSLPIDRVSGLSIVDLSVSAGLFESKSAARRMLKQGGFYMN 474

Query: 466 NSRVNSENKKIEAADIVDGKVLLLSAGKKNKVLVRIA 502
           N RV+ ENK+++  DIV+G+ L+LSAGKKNKV+VRI+
Sbjct: 475 NERVDDENKRVDEEDIVEGRGLVLSAGKKNKVVVRIS 511