Miyakogusa Predicted Gene
- Lj0g3v0203209.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0203209.1 Non Chatacterized Hit- tr|I1NFB3|I1NFB3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,78.07,0,Nucleotid_trans,Nucleotide-diphospho-sugar transferase;
seg,NULL; PROKAR_LIPOPROTEIN,NULL,gene.g15649.t1.1
(203 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G14590.1 | Symbols: | Nucleotide-diphospho-sugar transferase... 182 1e-46
AT2G02061.1 | Symbols: | Nucleotide-diphospho-sugar transferase... 171 4e-43
AT4G19970.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Nucleotide... 154 4e-38
AT5G44820.1 | Symbols: | Nucleotide-diphospho-sugar transferase... 146 1e-35
AT4G15970.1 | Symbols: | Nucleotide-diphospho-sugar transferase... 139 1e-33
AT5G40900.1 | Symbols: | Nucleotide-diphospho-sugar transferase... 104 5e-23
AT1G28695.1 | Symbols: | Nucleotide-diphospho-sugar transferase... 97 8e-21
AT1G28710.3 | Symbols: | Nucleotide-diphospho-sugar transferase... 96 2e-20
AT1G28710.1 | Symbols: | Nucleotide-diphospho-sugar transferase... 96 2e-20
AT1G28700.1 | Symbols: | Nucleotide-diphospho-sugar transferase... 96 2e-20
AT1G28710.2 | Symbols: | Nucleotide-diphospho-sugar transferase... 87 1e-17
>AT1G14590.1 | Symbols: | Nucleotide-diphospho-sugar transferase
family protein | chr1:4998957-5000617 REVERSE LENGTH=386
Length = 386
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/126 (69%), Positives = 103/126 (81%), Gaps = 1/126 (0%)
Query: 63 SNATSNEYP-LEKILNDAAMEDRTVILTTLNEAWAAPNSVIDLFLQSFRIGDRTSRLLNH 121
S+ NE P LE +L+ AA DRTV+LTTLN AWAAP SVIDLF +SFRIG+ TS++L+H
Sbjct: 75 SSYLDNEEPKLEDVLSKAATRDRTVVLTTLNAAWAAPGSVIDLFFESFRIGEETSQILDH 134
Query: 122 LVIIALDQKAFARCQVIHAHCFSLVSEETDFHKEAYFMTPSYLMMMWRRIDFLRSVLEMG 181
LVI+ALD KA++RC +H HCFSLV+E DF +EAYFMT SYL MMWRRID LRSVLEMG
Sbjct: 135 LVIVALDAKAYSRCLELHKHCFSLVTEGVDFSREAYFMTRSYLKMMWRRIDLLRSVLEMG 194
Query: 182 YNFVFT 187
YNFVFT
Sbjct: 195 YNFVFT 200
>AT2G02061.1 | Symbols: | Nucleotide-diphospho-sugar transferase
family protein | chr2:498025-499559 FORWARD LENGTH=408
Length = 408
Score = 171 bits (432), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/114 (73%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 75 ILNDAAMEDRTVILTTLNEAWAAPNSVIDLFLQSFRIGDRTSRLLNHLVIIALDQKAFAR 134
+L AA +D TVILTTLNEAWAAP SVIDLF +SFRIG T RLL HLVIIALD KA++R
Sbjct: 111 VLRRAATKDGTVILTTLNEAWAAPGSVIDLFFESFRIGKGTRRLLKHLVIIALDAKAYSR 170
Query: 135 CQVIHAHCFSLVSEETDF-HKEAYFMTPSYLMMMWRRIDFLRSVLEMGYNFVFT 187
CQ +H HCF L +E DF EAYFMTPSYL MMWRRI FLRSVLE GYNFVFT
Sbjct: 171 CQELHKHCFRLETEGVDFSGGEAYFMTPSYLTMMWRRISFLRSVLEKGYNFVFT 224
>AT4G19970.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Nucleotide-diphospho-sugar transferase, predicted
(InterPro:IPR005069); BEST Arabidopsis thaliana protein
match is: Nucleotide-diphospho-sugar transferase family
protein (TAIR:AT5G44820.1); Has 801 Blast hits to 466
proteins in 35 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 750; Viruses - 0; Other
Eukaryotes - 49 (source: NCBI BLink). |
chr4:10818242-10825343 FORWARD LENGTH=715
Length = 715
Score = 154 bits (389), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 96/139 (69%)
Query: 49 LAGFPSIFPSASTDSNATSNEYPLEKILNDAAMEDRTVILTTLNEAWAAPNSVIDLFLQS 108
L+ P + ++S+ S ++L +A+ E+RTVI+TTLN+AWA PNS+ DLFL+S
Sbjct: 419 LSSRPLLDHTSSSSPLTRSKSISFREVLENASTENRTVIVTTLNQAWAEPNSLFDLFLES 478
Query: 109 FRIGDRTSRLLNHLVIIALDQKAFARCQVIHAHCFSLVSEETDFHKEAYFMTPSYLMMMW 168
FRIG T +LL H+V++ LD KAFARC +H +C+ L + TDF E F TP YL MMW
Sbjct: 479 FRIGQGTKKLLQHVVVVCLDSKAFARCSQLHPNCYYLKTTGTDFSGEKLFATPDYLKMMW 538
Query: 169 RRIDFLRSVLEMGYNFVFT 187
RRI+ L VLEMGYNF+FT
Sbjct: 539 RRIELLTQVLEMGYNFIFT 557
Score = 133 bits (335), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 84/117 (71%), Gaps = 1/117 (0%)
Query: 72 LEKILNDAAMEDRTVILTTLNEAWAAPNSVIDLFLQSFRIGDRTSRLLNHLVIIALDQKA 131
LE++L +AAMED TVI+T LN+AWA PNS D+F +SF++G T RLL H++ + LD KA
Sbjct: 102 LERVLMNAAMEDNTVIITALNQAWAEPNSTFDVFRESFKVGIETERLLKHVIAVCLDIKA 161
Query: 132 FARCQVIHAHCFSLVSEETD-FHKEAYFMTPSYLMMMWRRIDFLRSVLEMGYNFVFT 187
+ +C +H HC+ + + ++D FMTP YL ++WRR+D LR V+ +GYNF+FT
Sbjct: 162 YDQCLKVHPHCYLINATDSDQLSGPNRFMTPGYLKLIWRRMDLLRQVIGLGYNFIFT 218
>AT5G44820.1 | Symbols: | Nucleotide-diphospho-sugar transferase
family protein | chr5:18095795-18097558 REVERSE
LENGTH=367
Length = 367
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 90/130 (69%)
Query: 58 SASTDSNATSNEYPLEKILNDAAMEDRTVILTTLNEAWAAPNSVIDLFLQSFRIGDRTSR 117
S+ T + ++IL +A+ ++ TVI+TTLN+AWA PNS+ DLFL+SFRIG T +
Sbjct: 78 SSEISPETTKPKLSFKEILENASTKNNTVIITTLNQAWAEPNSLFDLFLESFRIGQGTQQ 137
Query: 118 LLNHLVIIALDQKAFARCQVIHAHCFSLVSEETDFHKEAYFMTPSYLMMMWRRIDFLRSV 177
LL H+V++ LD KAF RC +H +C+ + + ETDF E + TP YL MMW RID L V
Sbjct: 138 LLKHVVVVCLDIKAFERCSQLHTNCYHIETSETDFSGEKVYNTPDYLKMMWARIDLLTQV 197
Query: 178 LEMGYNFVFT 187
LEMG+NF+FT
Sbjct: 198 LEMGFNFIFT 207
>AT4G15970.1 | Symbols: | Nucleotide-diphospho-sugar transferase
family protein | chr4:9049390-9051370 FORWARD LENGTH=358
Length = 358
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
Query: 60 STDSNATSNEYPLEKILNDAAMEDRTVILTTLNEAWAAPNSVIDLFLQSFRIGDRTSRLL 119
ST ++ + L KIL +AA ED+TVI+TTLN+AW+ PNS DLFL SF +G T LL
Sbjct: 21 STTTHHQEDLKKLGKILTEAATEDKTVIITTLNKAWSEPNSTFDLFLHSFHVGKGTKPLL 80
Query: 120 NHLVIIALDQKAFARCQVIHAH-CFSLVSEETDFHKEAYFMTPSYLMMMWRRIDFLRSVL 178
HLV+ LD++A++RC +H H C+ + + DF + FMTP YL MMWRRI+FL ++L
Sbjct: 81 RHLVVACLDEEAYSRCSEVHPHRCYFMKTPGIDFAGDKMFMTPDYLKMMWRRIEFLGTLL 140
Query: 179 EMGYNFVFTV 188
++ YNF+FT+
Sbjct: 141 KLRYNFIFTI 150
>AT5G40900.1 | Symbols: | Nucleotide-diphospho-sugar transferase
family protein | chr5:16391847-16393375 FORWARD
LENGTH=322
Length = 322
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 81/135 (60%), Gaps = 10/135 (7%)
Query: 72 LEKILNDAAMEDRTVILTTLNEAWAAPNSVIDLFLQSFRIGDRTSRLLNHLVIIALDQKA 131
L +L +AA ED+ VI+T ++ WA P+S++DLFL+S RIG+RT LLNHL+++ALD +A
Sbjct: 57 LSSLLKEAATEDKIVIITMVDREWAKPDSILDLFLESVRIGERTKHLLNHLIVVALDDQA 116
Query: 132 FARCQVIHAHCFSLVSEETDFHKEAYFMTPSYLMMMWRRIDFLRSVLEMGYNFVFTVS-- 189
C H HC+ K++ + P L+ W + ++ +LE+GY+ +FT +
Sbjct: 117 LRYCLRAHPHCYLHRYSR----KKSESLKPDGLVTGWNKKSLVKEILELGYHIMFTEADV 172
Query: 190 --LFSP--HCLPLQA 200
L +P HC P A
Sbjct: 173 MWLRNPLMHCNPQNA 187
>AT1G28695.1 | Symbols: | Nucleotide-diphospho-sugar transferase
family protein | chr1:10081894-10083054 REVERSE
LENGTH=329
Length = 329
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 87/148 (58%), Gaps = 9/148 (6%)
Query: 49 LAGFPSIFPSASTDSNATSNEYPLEKI----LNDAAMEDRTVILTTLNEAW----AAPNS 100
AG IF + + + +YP++++ AA ++TVI+T +N+A+ ++
Sbjct: 19 FAGALYIFNYQNYVNTLRTTQYPVDELEAALYTAAAGNNKTVIITMVNKAYVKEVGRGST 78
Query: 101 VIDLFLQSFRIGDRTSRLLNHLVIIALDQKAFARCQVIHAHCFSLVSEE-TDFHKEAYFM 159
++DLFL+SF G+ T LL+HL+++A+DQ A+ RC+ HC+ + +E+ D E FM
Sbjct: 79 MLDLFLESFWEGEGTLPLLDHLMVVAVDQTAYDRCRFKRLHCYKMETEDGVDLEGEKVFM 138
Query: 160 TPSYLMMMWRRIDFLRSVLEMGYNFVFT 187
+ ++ MMWRR + VL GYN +FT
Sbjct: 139 SKDFIEMMWRRTRLILDVLRRGYNVIFT 166
>AT1G28710.3 | Symbols: | Nucleotide-diphospho-sugar transferase
family protein | chr1:10086850-10088025 REVERSE
LENGTH=340
Length = 340
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 76/127 (59%), Gaps = 8/127 (6%)
Query: 69 EYP---LEKILNDAAM-EDRTVILTTLNEAWA----APNSVIDLFLQSFRIGDRTSRLLN 120
EYP LE +L+ AAM ++TVI+ +N+A+ +++DLFL+SF G+ T LL+
Sbjct: 48 EYPVDELEAVLDKAAMGNNKTVIIAMVNKAYVEEVEGGRTMLDLFLESFWEGEGTRPLLD 107
Query: 121 HLVIIALDQKAFARCQVIHAHCFSLVSEETDFHKEAYFMTPSYLMMMWRRIDFLRSVLEM 180
HL+++A DQ ++ RC HC+ + ++ D E +M+ ++ MMWRR L VL
Sbjct: 108 HLMLVAADQTSYDRCLFRRLHCYKMDTDGVDLEGEKVYMSKDFIEMMWRRTHLLLDVLSR 167
Query: 181 GYNFVFT 187
GYN FT
Sbjct: 168 GYNLTFT 174
>AT1G28710.1 | Symbols: | Nucleotide-diphospho-sugar transferase
family protein | chr1:10086850-10088025 REVERSE
LENGTH=340
Length = 340
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 76/127 (59%), Gaps = 8/127 (6%)
Query: 69 EYP---LEKILNDAAM-EDRTVILTTLNEAWA----APNSVIDLFLQSFRIGDRTSRLLN 120
EYP LE +L+ AAM ++TVI+ +N+A+ +++DLFL+SF G+ T LL+
Sbjct: 48 EYPVDELEAVLDKAAMGNNKTVIIAMVNKAYVEEVEGGRTMLDLFLESFWEGEGTRPLLD 107
Query: 121 HLVIIALDQKAFARCQVIHAHCFSLVSEETDFHKEAYFMTPSYLMMMWRRIDFLRSVLEM 180
HL+++A DQ ++ RC HC+ + ++ D E +M+ ++ MMWRR L VL
Sbjct: 108 HLMLVAADQTSYDRCLFRRLHCYKMDTDGVDLEGEKVYMSKDFIEMMWRRTHLLLDVLSR 167
Query: 181 GYNFVFT 187
GYN FT
Sbjct: 168 GYNLTFT 174
>AT1G28700.1 | Symbols: | Nucleotide-diphospho-sugar transferase
family protein | chr1:10083773-10084958 REVERSE
LENGTH=338
Length = 338
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 76/127 (59%), Gaps = 8/127 (6%)
Query: 69 EYP---LEKILNDAAM-EDRTVILTTLNEAW----AAPNSVIDLFLQSFRIGDRTSRLLN 120
+YP LE +L+ A+ ++TVI+ +N+A+ +++DLFL+SF G+ T LLN
Sbjct: 49 QYPVDELETVLDKASTGNNKTVIIAMVNKAYVEEDGGGRTMLDLFLESFWEGEGTRPLLN 108
Query: 121 HLVIIALDQKAFARCQVIHAHCFSLVSEETDFHKEAYFMTPSYLMMMWRRIDFLRSVLEM 180
HL+++A DQ A+ RC HC+ + +E D E +M+ ++ MMWRR L VL
Sbjct: 109 HLMVVAADQTAYDRCLFRRLHCYKMDTEGVDLEGEKVYMSKDFIEMMWRRTRLLLDVLSR 168
Query: 181 GYNFVFT 187
GY+ +FT
Sbjct: 169 GYHIIFT 175
>AT1G28710.2 | Symbols: | Nucleotide-diphospho-sugar transferase
family protein | chr1:10086850-10087766 REVERSE
LENGTH=278
Length = 278
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
Query: 83 DRTVILTTLNEAWA----APNSVIDLFLQSFRIGDRTSRLLNHLVIIALDQKAFARCQVI 138
++TVI+ +N+A+ +++DLFL+SF G+ T LL+HL+++A DQ ++ RC
Sbjct: 4 NKTVIIAMVNKAYVEEVEGGRTMLDLFLESFWEGEGTRPLLDHLMLVAADQTSYDRCLFR 63
Query: 139 HAHCFSLVSEETDFHKEAYFMTPSYLMMMWRRIDFLRSVLEMGYNFVFT 187
HC+ + ++ D E +M+ ++ MMWRR L VL GYN FT
Sbjct: 64 RLHCYKMDTDGVDLEGEKVYMSKDFIEMMWRRTHLLLDVLSRGYNLTFT 112