Miyakogusa Predicted Gene

Lj0g3v0202109.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0202109.1 Non Chatacterized Hit- tr|I1M6F5|I1M6F5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,49,3e-19,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.12849.1
         (108 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G55850.1 | Symbols: ATCSLE1, CSLE1 | cellulose synthase like ...    70   2e-13

>AT1G55850.1 | Symbols: ATCSLE1, CSLE1 | cellulose synthase like E1
           | chr1:20876752-20879414 FORWARD LENGTH=729
          Length = 729

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 54/100 (54%), Gaps = 4/100 (4%)

Query: 9   PLFETTRGRGRFI-YRPFAISLFVAICFIWAYRFTHITTRTGEEDATKYXXXXXXXXXXX 67
           PLFET R  GR I YR F+ S+FV IC IW YR   I       D   +           
Sbjct: 18  PLFETRRRTGRVIAYRFFSASVFVCICLIWFYRIGEIGDNRTVLDRLIWFVMFIVEIWFG 77

Query: 68  XXXXYWILTQALRWNLVYRQPFNTRLSQRYEDVLPAVDIF 107
               YW++TQ+ RWN V+R PF+ RLS+RY   LP +D+F
Sbjct: 78  L---YWVVTQSSRWNPVWRFPFSDRLSRRYGSDLPRLDVF 114