Miyakogusa Predicted Gene

Lj0g3v0201789.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0201789.2 Non Chatacterized Hit- tr|E1ZNJ1|E1ZNJ1_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,33.15,9e-19,GCN4-COMPLEMENTING PROTEIN,NULL;
CENTAURIN/ARF,NULL; PH_DOMAIN,Pleckstrin homology domain; BAR/IMD
d,CUFF.12833.2
         (315 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13300.1 | Symbols: SFC, VAN3, AGD3 | ARF GTPase-activating p...   427   e-120
AT5G61980.1 | Symbols: AGD1 | ARF-GAP domain 1 | chr5:24894472-2...   423   e-119
AT1G10870.1 | Symbols: AGD4 | ARF-GAP domain 4 | chr1:3616905-36...   281   3e-76
AT1G60860.1 | Symbols: AGD2 | ARF-GAP domain 2 | chr1:22401244-2...   274   7e-74

>AT5G13300.1 | Symbols: SFC, VAN3, AGD3 | ARF GTPase-activating
           protein | chr5:4255923-4262018 REVERSE LENGTH=827
          Length = 827

 Score =  427 bits (1098), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/329 (64%), Positives = 251/329 (76%), Gaps = 22/329 (6%)

Query: 1   MHFANLDDTPMFRQQLQCLEESAESLRTRCTKLYKGCRKYTEGLGDSYHGDIAFATTLEN 60
           MHF  LDD+PMFR+QLQ +EESAE LR R  K YKGCRKYTEGLG++Y GDIAFA+ LE 
Sbjct: 1   MHFTKLDDSPMFRKQLQSMEESAEILRERSLKFYKGCRKYTEGLGEAYDGDIAFASALET 60

Query: 61  FGGGYADPHFVALGGPVMTNFTIALREIATYKQLLRSQ---------------------E 99
           FGGG+ DP  VA GGPVMT FTIALREI TYK++LRSQ                     E
Sbjct: 61  FGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHILNDRLLQFANMDLHEVKE 120

Query: 100 ARKCFDKASLVYDQARDKFMSLRKSTKIDIASVIEEELQNARTSFEEARFNLVGALNNIE 159
           ARK FDKASL YDQAR+KF+SLRK TK D+A+ +E+EL  +R+ FE+ARFNLV AL+N+E
Sbjct: 121 ARKRFDKASLTYDQAREKFLSLRKGTKSDVAAALEQELHTSRSMFEQARFNLVTALSNVE 180

Query: 160 VKKRFEFLEVVAGIMDAHLRYFQQGYHLLTQMGPFINEVLDFVHQSRERYDTEQISLYKR 219
            KKRFEFLE V+G MDAHLRYF+QGY LL QM P+IN+VL +  QSRER + EQ +L ++
Sbjct: 181 AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEQAALNEK 240

Query: 220 MEDYKRQVYQESRLSLNGPYGGSPSGDSRHPFSKTSNEVADVVMESAANGKVQIIRQGYL 279
           M++YKRQV +ESR   NG   GSP+GD      ++S+++ D VM+SAA GKVQ IRQGYL
Sbjct: 241 MQEYKRQVDRESRWGSNGS-NGSPNGDGIQAIGRSSHKMIDAVMQSAARGKVQTIRQGYL 299

Query: 280 SKRSSNLRADWKRRYFVLDSRGMLYYYRK 308
           SKRSSNLR DWKRR+FVLDSRGMLYYYRK
Sbjct: 300 SKRSSNLRGDWKRRFFVLDSRGMLYYYRK 328


>AT5G61980.1 | Symbols: AGD1 | ARF-GAP domain 1 |
           chr5:24894472-24899178 FORWARD LENGTH=828
          Length = 828

 Score =  423 bits (1088), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/334 (62%), Positives = 252/334 (75%), Gaps = 26/334 (7%)

Query: 1   MHFANLDDTPMFRQQLQCLEESAESLRTRCTKLYKGCRKYTEGLGDSYHGDIAFATTLEN 60
           MHFA LDD+PMFRQQ+Q +EESAE LR RC + YKGCRKYTEGLG+ Y  DI F   LE+
Sbjct: 1   MHFAKLDDSPMFRQQMQSMEESAELLRLRCLRFYKGCRKYTEGLGEGYDADIGFVNALES 60

Query: 61  FGGGYADPHFVALGGPVMTNFTIALREIATYKQLLRSQ---------------------E 99
           FGGG+ DP  VA GGPVMT FTIALREI TYK++LRSQ                     E
Sbjct: 61  FGGGHNDPVCVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLSDRLLQFVNGDVHEVKE 120

Query: 100 ARKCFDKASLVYDQARDKFMSLRKSTKIDIASVIEEELQNARTSFEEARFNLVGALNNIE 159
           ARK FDKA++ YDQAR+K++SLRKST++D+A+ IEE+L +ART+FE+ARF+LV AL+N E
Sbjct: 121 ARKRFDKATITYDQAREKYLSLRKSTRLDVAATIEEDLHSARTTFEQARFHLVSALSNAE 180

Query: 160 VKKRFEFLEVVAGIMDAHLRYFQQGYHLLTQMGPFINEVLDFVHQSRERYDTEQISLYKR 219
            KKRFEFLE V+G MDAHLR+F+QGY LL QM PFIN+VL + HQSRE  + E  SL +R
Sbjct: 181 SKKRFEFLEAVSGTMDAHLRFFKQGYELLHQMEPFINQVLAYAHQSRECANYEMASLNER 240

Query: 220 MEDYKRQVYQESRLSLNGPYGGSPSGDSRHPFSKTSNEVADVVMESAANGKVQIIRQGYL 279
           M++Y+RQV +E+R S       SP+GD     S+ S +V + VM+SAA GKVQ IRQGYL
Sbjct: 241 MQEYQRQVDRETRNSCV-----SPTGDGMRHNSRNSQKVIEAVMQSAAKGKVQTIRQGYL 295

Query: 280 SKRSSNLRADWKRRYFVLDSRGMLYYYRKPWHVS 313
           SKRSSNLR DWKRR+F+LDSRGMLYYYRKPW+ S
Sbjct: 296 SKRSSNLRGDWKRRFFILDSRGMLYYYRKPWNWS 329


>AT1G10870.1 | Symbols: AGD4 | ARF-GAP domain 4 |
           chr1:3616905-3623612 REVERSE LENGTH=775
          Length = 775

 Score =  281 bits (720), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 142/329 (43%), Positives = 216/329 (65%), Gaps = 33/329 (10%)

Query: 3   FANLDDTPMFRQQLQCLEESAESLRTRCTKLYKGCRKYTEGLGDSYHGDIAFATTLENFG 62
           F NL+D+PMF++Q+  LE +A+ L+ RC KLYKG +K+   LG++  G+ AFA  LE FG
Sbjct: 4   FINLEDSPMFQKQVCSLEGTADELKDRCQKLYKGVKKFMGTLGEASKGESAFAACLEEFG 63

Query: 63  GGYADPHFVALGGPVMTNFTIALREIATYKQLLRSQ---------------------EAR 101
           GG  DP  +++GGPV++ F  ALRE+A+YK+ L SQ                     E+R
Sbjct: 64  GGPDDPISLSIGGPVISKFINALRELASYKEFLCSQVEHVLLERLMNFISVDLQEAKESR 123

Query: 102 KCFDKASLVYDQARDKFMSLRKSTKIDIASVIEEELQNARTSFEEARFNLVGALNNIEVK 161
             FDKA+  YDQ+R+KF+SL+K+T+ +I + +EE+L+N++++FE++RFNLV +L  IE K
Sbjct: 124 HRFDKAAHSYDQSREKFVSLKKNTRGEIVAELEEDLENSKSTFEKSRFNLVNSLMTIEAK 183

Query: 162 KRFEFLEVVAGIMDAHLRYFQQGYHLLTQMGPFINEVLDFVHQSRERYDTEQISLYKRME 221
           K++EFLE ++ IMDAHLRYF+ GY LL Q+ PFI+++L +  QS+E+   EQ  L +R++
Sbjct: 184 KKYEFLESISAIMDAHLRYFKLGYDLLNQLEPFIHQILTYAQQSKEQSKIEQDRLARRIQ 243

Query: 222 DYKRQVYQESRLSLNGPYGGSPSGD---SRHPFSKTSNEVADVVMESAANGKVQIIRQGY 278
           +++ Q   +S+  +        +G+      P+  T         E++     ++I+QGY
Sbjct: 244 EFRTQSELDSQQLVANAESSGANGNRVGGNIPYKNT---------ETSLTADKEVIKQGY 294

Query: 279 LSKRSSNLRADWKRRYFVLDSRGMLYYYR 307
           L KRSS+LR DWKR++FVLDS G +YYYR
Sbjct: 295 LLKRSSSLRTDWKRKFFVLDSHGSMYYYR 323


>AT1G60860.1 | Symbols: AGD2 | ARF-GAP domain 2 |
           chr1:22401244-22407639 REVERSE LENGTH=776
          Length = 776

 Score =  274 bits (700), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 139/327 (42%), Positives = 214/327 (65%), Gaps = 27/327 (8%)

Query: 3   FANLDDTPMFRQQLQCLEESAESLRTRCTKLYKGCRKYTEGLGDSYHGDIAFATTLENFG 62
           F NL+D+PMF++Q+  LE +++ L+ RC KLYKG +K+   LG++  G  AFA +LE FG
Sbjct: 4   FINLEDSPMFQKQVFSLEGTSDELKDRCQKLYKGVKKFMGALGEASTGVSAFADSLEEFG 63

Query: 63  GGYADPHFVALGGPVMTNFTIALREIATYKQLLRSQ---------------------EAR 101
            G+ DP  V++GGPV++ F   LRE+++YK+ LRSQ                     E+R
Sbjct: 64  AGHDDPVSVSIGGPVISKFINTLRELSSYKEFLRSQVEHVLLERLTNFMTVDLQEAKESR 123

Query: 102 KCFDKASLVYDQARDKFMSLRKSTKIDIASVIEEELQNARTSFEEARFNLVGALNNIEVK 161
           + FDKA   YDQAR+KF+SL+K+T+ DI + +EE+L+N++++FE++RFNLV +L  IE K
Sbjct: 124 RRFDKAVHSYDQAREKFVSLKKNTRGDIVAELEEDLENSKSAFEKSRFNLVNSLMTIEAK 183

Query: 162 KRFEFLEVVAGIMDAHLRYFQQGYHLLTQMGPFINEVLDFVHQSRERYDTEQISLYKRME 221
           K++EFLE ++ IMD+H +YF+ GY LL+Q+ P+I++VL +  QS+E+   EQ    +R++
Sbjct: 184 KKYEFLESISAIMDSHFKYFKLGYDLLSQLEPYIHQVLTYAQQSKEQSKIEQDRFAQRIQ 243

Query: 222 DYKRQVYQESRLSLNGPYGGSPSG-DSRHPFSKTSNEVADVVMESAANGKVQIIRQGYLS 280
           +++ Q   +S+          PS     H +     +  +V   S +    ++ +QGYL 
Sbjct: 244 EFRTQSELDSQ---QASAKADPSDVGGNHVYRAIPRK--NVEANSVSTADKEVTKQGYLL 298

Query: 281 KRSSNLRADWKRRYFVLDSRGMLYYYR 307
           KRS++LRADWKRR+FVLD+ G LYYYR
Sbjct: 299 KRSASLRADWKRRFFVLDNHGSLYYYR 325