Miyakogusa Predicted Gene
- Lj0g3v0201229.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0201229.1 tr|Q655R5|Q655R5_ORYSJ Dentin
sialophosphoprotein-like OS=Oryza sativa subsp. japonica
GN=P0686E06.3,35.74,2e-18, ,CUFF.12776.1
(260 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G06660.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 161 5e-40
AT2G30820.2 | Symbols: | unknown protein; BEST Arabidopsis thal... 158 3e-39
AT2G30820.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 158 3e-39
AT1G04030.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 52 6e-07
>AT1G06660.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G30820.2); Has 166 Blast hits to 144 proteins
in 35 species: Archae - 0; Bacteria - 17; Metazoa - 13;
Fungi - 20; Plants - 104; Viruses - 0; Other Eukaryotes
- 12 (source: NCBI BLink). | chr1:2037461-2040148
REVERSE LENGTH=481
Length = 481
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/270 (44%), Positives = 150/270 (55%), Gaps = 50/270 (18%)
Query: 24 TETERKNKSVRFECVSSDDGDVKKIKSPNNQSACKP-----------SPYPTPLKLFDEM 72
T T KNKSVRFEC D S N S+ KP SP PTPLKL DEM
Sbjct: 214 TFTAGKNKSVRFEC---DLDQSNSSNSSENGSSRKPEMGGKICFTVSSPNPTPLKLSDEM 270
Query: 73 QTPGTVYPASLEKSRDCKHRVRSQFVYSNDNPSENVFLSKILEEKDLNTEQDSSELSDYV 132
QTPGT+YPA++E + R+RSQFV+S N EN L K+ +DS E DY
Sbjct: 271 QTPGTIYPANMESGGRGRPRIRSQFVHSVSNIMENASLYKVY--------KDSHEGLDYE 322
Query: 133 KQAQSATPTPE---KGLKKFANENESVMEASLSSWLR-------------PASVIM---E 173
+Q ++ TP+ E + +++ ++E S EAS S WL P ++ +
Sbjct: 323 EQIEAETPSSETYGEKVEESSDEKLSKFEASFSPWLNQINENIAALNERTPGVGVITPGD 382
Query: 174 DKLVGVVAAHGNEDEDSHISHPKWWDGNGIPNSTTKYKEDQKVMWHATPFEERLNKALVE 233
++G+VAA E+E + IS PK WDGNGIPNSTTKYKEDQKV WHATPFE RL KAL E
Sbjct: 383 RPIIGLVAAQWIENEQTEIS-PKMWDGNGIPNSTTKYKEDQKVSWHATPFEVRLEKALSE 441
Query: 234 ---GNVISQRKLVCGKPVAFEEIDESDTAL 260
++ QRKL V EE+ E DT +
Sbjct: 442 EGGQSLFPQRKL----EVMMEEV-EGDTDI 466
>AT2G30820.2 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G06660.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr2:13129800-13132391 FORWARD LENGTH=421
Length = 421
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 136/225 (60%), Gaps = 25/225 (11%)
Query: 24 TETERKNKSVRFECVSSDDGDVKKIKSPNNQSACKP-----------SPYPTPLKLFDEM 72
T K KSVR E D G S N++A KP SPY T +KL DE+
Sbjct: 173 TGVREKTKSVRSEI---DFGQSYSSSSSKNRTASKPEMVGKTSISATSPYTTSMKLSDEI 229
Query: 73 QTPGTVYPASLEKSRDCKHRVRSQFVYSNDNPSENVFLSKILEEKDLNTEQDSSELSDYV 132
QTPGT++PA++E + + R+RSQFV+S N N L K+ E+ + N EQ +++ Y
Sbjct: 230 QTPGTIFPANMESAGRERRRIRSQFVHSASNLIVNASLCKLHEDSNANLEQ--AKVQAYK 287
Query: 133 KQAQSATPTPE---KGLKKFANENESVMEASLSSWLRPASVIMEDK-LVGVVAAHGNEDE 188
++ ++ +PT + L++ ++ + + E S S P S+ D+ ++G+VAAH NE E
Sbjct: 288 EKTENESPTSTICGEKLEESSDGKKQIGEISSS----PLSINPGDRPIIGMVAAHWNEKE 343
Query: 189 DSHISHPKWWDGNGIPNSTTKYKEDQKVMWHATPFEERLNKALVE 233
S IS PKWWDGNGIPNST KYKEDQKV WHATPFEERL KAL E
Sbjct: 344 HSQIS-PKWWDGNGIPNSTNKYKEDQKVSWHATPFEERLEKALSE 387
>AT2G30820.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G06660.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr2:13129800-13132391 FORWARD LENGTH=421
Length = 421
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 136/225 (60%), Gaps = 25/225 (11%)
Query: 24 TETERKNKSVRFECVSSDDGDVKKIKSPNNQSACKP-----------SPYPTPLKLFDEM 72
T K KSVR E D G S N++A KP SPY T +KL DE+
Sbjct: 173 TGVREKTKSVRSEI---DFGQSYSSSSSKNRTASKPEMVGKTSISATSPYTTSMKLSDEI 229
Query: 73 QTPGTVYPASLEKSRDCKHRVRSQFVYSNDNPSENVFLSKILEEKDLNTEQDSSELSDYV 132
QTPGT++PA++E + + R+RSQFV+S N N L K+ E+ + N EQ +++ Y
Sbjct: 230 QTPGTIFPANMESAGRERRRIRSQFVHSASNLIVNASLCKLHEDSNANLEQ--AKVQAYK 287
Query: 133 KQAQSATPTPE---KGLKKFANENESVMEASLSSWLRPASVIMEDK-LVGVVAAHGNEDE 188
++ ++ +PT + L++ ++ + + E S S P S+ D+ ++G+VAAH NE E
Sbjct: 288 EKTENESPTSTICGEKLEESSDGKKQIGEISSS----PLSINPGDRPIIGMVAAHWNEKE 343
Query: 189 DSHISHPKWWDGNGIPNSTTKYKEDQKVMWHATPFEERLNKALVE 233
S IS PKWWDGNGIPNST KYKEDQKV WHATPFEERL KAL E
Sbjct: 344 HSQIS-PKWWDGNGIPNSTNKYKEDQKVSWHATPFEERLEKALSE 387
>AT1G04030.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G44040.1); Has 1835 Blast hits to 1511 proteins
in 238 species: Archae - 7; Bacteria - 164; Metazoa -
377; Fungi - 135; Plants - 187; Viruses - 22; Other
Eukaryotes - 943 (source: NCBI BLink). |
chr1:1040597-1042313 FORWARD LENGTH=434
Length = 434
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 202 GIPNSTTKYKEDQKVMWHATPFEERLNKAL 231
GIPN+++KY+ED+ V WH+TPFE RL KAL
Sbjct: 400 GIPNTSSKYREDKSVNWHSTPFEARLEKAL 429