Miyakogusa Predicted Gene

Lj0g3v0201119.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0201119.1 Non Chatacterized Hit- tr|G7JAU9|G7JAU9_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,78.96,0,seg,NULL; ARM repeat,Armadillo-type
fold,CUFF.12769.1
         (1242 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14180.1 | Symbols: AtPRD1, PRD1 | putative recombination ini...  1010   0.0  

>AT4G14180.1 | Symbols: AtPRD1, PRD1 | putative recombination
            initiation defect 1 | chr4:8178330-8183515 FORWARD
            LENGTH=1268
          Length = 1268

 Score = 1010 bits (2611), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 547/1220 (44%), Positives = 763/1220 (62%), Gaps = 76/1220 (6%)

Query: 34   LNLPTHQGGSICLVCFSNLISNPHSPTIHVSYAXXXXXXXXXXXXXXXXILTFHPHFLLS 93
            ++L   QGG+ CL+CFSNL+S+P  PT+HVSYA                +L+ H HFL+S
Sbjct: 39   ISLRDDQGGTFCLICFSNLVSDPRIPTVHVSYALHQLSIAISEPIFLRTLLSSHIHFLVS 98

Query: 94   PLITALSSFDDDPVAEQLIHLVLALAVSPQQPSIRRQFVARVSDRISSGALGWSPRQLHM 153
            PL+ ALSS DD P+A Q++ ++ +L  S ++ SI   FV R+SD++SSGALGWS RQLHM
Sbjct: 99   PLVHALSSIDDAPIAIQIMDMI-SLLCSVEESSIGEDFVERISDQLSSGALGWSRRQLHM 157

Query: 154  LHCLGALLNCEKDDDLHVHIKDIYSLISVLVTGLQLPSEEIRGEVLFVLYKLYFLQSKSA 213
            LHC G L++CE + +++ HI+D  +L+  LV GLQLPSEEIRGE+LF LYK   LQ    
Sbjct: 158  LHCFGVLMSCE-NININSHIRDKEALVCQLVEGLQLPSEEIRGEILFALYKFSALQFTEQ 216

Query: 214  EGDGSDILIRFCPKLLYLLTNVLMKTQNDDVRLNCIXXXXXXXXX--XXXXEECACDSSY 271
              DG ++L   CPKLL L    L KTQ DDVRLNC+                  +  S  
Sbjct: 217  NVDGIEVLSLLCPKLLCLSLEALAKTQRDDVRLNCVALLTILAQQGLLANSHSNSASSMS 276

Query: 272  MSSSGGVNYKESEDGVNGSSLVNLFAEAIKGPMLSSDSQVQISTLDLLFHYLSSVGTSGN 331
            +        + +E+      L  LFAEAIKGP+LS+DS+VQI TLDL+FHY+S   T   
Sbjct: 277  LDEVDDDPMQTAENVAARPCLNVLFAEAIKGPLLSTDSEVQIKTLDLIFHYISQESTPSK 336

Query: 332  QIQVLVEENIADYLFEILRLSEYKDPAVKMCLQLLDLLSTAEEVFKPRLVVGFSTLIPVL 391
            QIQV+VEEN+ADY+FEILRLS                   AE  F+ RLV+GF ++I VL
Sbjct: 337  QIQVMVEENVADYIFEILRLS-------------------AEHSFRKRLVIGFPSVIRVL 377

Query: 392  RYVAEVPFHPVQYETLKLIFYCISEFPGAVSTSQLEELVLILTRMFRKHSDGEMGIIPET 451
             YV EVP HP Q +TLKLI  CIS+FPG  S+SQ++E+ L+L +M  ++   EMG+ P+ 
Sbjct: 378  HYVGEVPCHPFQIQTLKLISSCISDFPGIASSSQVQEIALVLKKMLERYYSQEMGLFPDA 437

Query: 452  FAMACSVFVALIRSPSCKEALDLSKSIEEAIKHAISACLYVSERNINQILQCLYLLKEAY 511
            FA+ CSVFV+L+++PS  E  D+  S++E+++H+I A L + E++  QIL  +YLL E Y
Sbjct: 438  FAIICSVFVSLMKTPSFGETADVLTSLQESLRHSILASLSLPEKDSTQILHAVYLLNEVY 497

Query: 512  AYSHDGNSTNSSI-LELRCSILDICRTRLLPWLLSDINEMQEEIVLGLLEIFHSILLLHP 570
             Y     S N +I +ELR  ++D+C + LLPW LSD+NE+ EE  LG++E FHSILL + 
Sbjct: 498  VYCTASTSINKTICIELRHCVIDVCTSHLLPWFLSDVNEVNEEATLGIMETFHSILLQNS 557

Query: 571  SIDSTEFAETLISSCWFSFSYGCLGLFTGDRMKHRIYXXXXXXXXXXXGIDSGQPVRDAA 630
             I + EFAE L+S+ WFSFS+GCLG F  D MK RIY              +G  +RDA 
Sbjct: 558  DIQAKEFAELLVSADWFSFSFGCLGNFCTDNMKQRIYLMLSSLVDILLEQKTGSHIRDAL 617

Query: 631  LHLPSDPVDLLFLLRQRSTNRSDFPSCQSAALLIMYTSSLYDERLADGKLVLASLEQYIL 690
              LPSDP DLLFLL Q S+N  +  SCQSAALLI +TSS+Y++                 
Sbjct: 618  HCLPSDPQDLLFLLGQASSNNQELASCQSAALLIFHTSSIYND----------------- 660

Query: 691  LNCGAFHNWATDILTVTRLVNLYSLLRGLGNMVYQVQYSREAEEIIFQLINNGEWDLLSA 750
                                      R L N  YQ+ YS EAE IIF L+N  EWDL S 
Sbjct: 661  --------------------------RSLQNERYQISYSLEAERIIFHLLNEYEWDLGSI 694

Query: 751  RTHIVSLKWLFRQENIVKSLCHQILKFCQSYNL--EEADIIIGNNSQTINVQTLAELVST 808
              H+ SLKWLF+QE+I KSL +QI K  ++ NL   E   + G+  Q       A+L+S 
Sbjct: 695  NIHLESLKWLFQQESISKSLIYQIQKISRN-NLIGNEVHNVYGDGRQRSLTYWFAKLISE 753

Query: 809  GENYGARLFVCLLAQLFEEEGQEHEMISVLNLMATMVHVCPAVSDQLSLHGIAATIKTWC 868
            G+NY A L V LL QL E+E QE+++IS+LNLM T+V + P  S+ LS++GI + I    
Sbjct: 754  GDNYAATLLVNLLTQLAEKEEQENDVISILNLMNTIVSIFPTASNNLSMNGIGSVIHRLV 813

Query: 869  --FST----TTFMSILILAFNILSSAHPQTLSADQSWVAVTMKMIEYSIPATMADILSHE 922
              FS     T+F ++L+L FNIL+S  P  L  D+SW AV++K++ +      A   +HE
Sbjct: 814  SGFSNSSLGTSFRTLLLLVFNILTSVQPAVLMIDESWYAVSIKLLNFLSLRDTAIKQNHE 873

Query: 923  SLFVIGILSLILHLSTNEALEDPSKSILFNTCIISAVNTVVCAASSKGAALSDHDEGTST 982
             + VIGILSL+L+ S++ AL + S++I+ N+ ++SA+NTVV  A SKG AL+   + T+ 
Sbjct: 874  DMVVIGILSLVLYHSSDGALVEASRNIVSNSYLVSAINTVVDVACSKGPALTQCQDETNI 933

Query: 983  GETLIFVLLLNYFAVKSLHAVIPGFVDWQSFLVSTNPSEPLAFIGIRCHELCRLLHFGSS 1042
            GE L F LLL +F+++SL  V+ G VDWQ+F  ++   E L  + I CH LCRL+HFG+ 
Sbjct: 934  GEALAFTLLLYFFSLRSLQIVLAGAVDWQTFFGTSTSLETLPVVCIHCHNLCRLMHFGAP 993

Query: 1043 VIKIIASYSLLELFNRISDQINSKHEELRCSIGHLMSIRSILEGLVFYSDLRVATNCALC 1102
             IK+IASY LLEL   +S+Q++ K E+L+CS  +L S++++L GLVF  D+RVATN ALC
Sbjct: 994  QIKLIASYCLLELLTGLSEQVDIKKEQLQCSSSYLKSMKAVLGGLVFCDDIRVATNSALC 1053

Query: 1103 LSMLMRWENHAEETKLLGHSSWCRLVIEEMTVSLAAPSLASQSFMESQRPAVXXXXXXXX 1162
            LSM++ WE+    T++L  SSW R + EEM+VSLA P  AS +++   +PAV        
Sbjct: 1054 LSMILGWEDMEGRTEMLKTSSWYRFIAEEMSVSLAMPCSASSTYVNHHKPAVYLTVAMLR 1113

Query: 1163 XXXXPQWVRYVFNNSCISGILENIAATNLSSEILVLFRELLKSDFLSTEQITTINQILQE 1222
                P W+R VF+ SCIS +++N+   N+S EI++LFREL++++ L+++Q+T +++  QE
Sbjct: 1114 LKNKPVWLRTVFDESCISSMIQNLNGINISREIVILFRELMQAELLNSQQVTKLDRAFQE 1173

Query: 1223 CRKRMYTNNAQEGLPKEPVK 1242
            CRK+M+ N  ++   +E V+
Sbjct: 1174 CRKQMHRNGTRDETVEEQVQ 1193