Miyakogusa Predicted Gene

Lj0g3v0200849.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0200849.1 Non Chatacterized Hit- tr|K4DA52|K4DA52_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,34.31,7e-18,no
description,Homeodomain-like; seg,NULL; HOMEOBOX PROTEIN
KNOTTED-1-RELATED,NULL; HOMEOBOX PROTEIN,CUFF.12749.1
         (254 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G35940.3 | Symbols: BLH1 | BEL1-like homeodomain 1 | chr2:150...    82   3e-16
AT2G35940.2 | Symbols: BLH1 | BEL1-like homeodomain 1 | chr2:150...    82   3e-16
AT2G35940.1 | Symbols: BLH1, EDA29 | BEL1-like homeodomain 1 | c...    82   3e-16

>AT2G35940.3 | Symbols: BLH1 | BEL1-like homeodomain 1 |
           chr2:15089171-15091699 REVERSE LENGTH=680
          Length = 680

 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 120/281 (42%), Gaps = 62/281 (22%)

Query: 2   QVSNWFINARVRLWKPXXXXXXXXXXXXXXKANGSKE------------SSQSTNKERGS 49
           QVSNWFINARVRLWKP              K  GS E            S  ++N+E+  
Sbjct: 431 QVSNWFINARVRLWKPMVEEMYMEEMKEQAKNMGSMEKTPLDQSNEDSASKSTSNQEKSP 490

Query: 50  SPPNNVTPESGDEIKLEHIKNLQSSXISTNSSVGGGPFQSHSGFQLVGSSDHMIQRSSEM 109
               N          LE +  +Q           G P       +L  S + M+Q    +
Sbjct: 491 MADTNYHMNPNHNGDLEGVTGMQ-----------GSP------KRLRTSDETMMQ---PI 530

Query: 110 QNNSPSSIGNNIRFGNERNHKDLGYHALMTDHGGGFGSLFSSMEDIGMSRFNVTHEQ--L 167
             +  S+    ++   ER         + +D G  F   F   +   MSRF+V  +Q  +
Sbjct: 531 NADFSSNEKLTMKILEER-------QGIRSDGGYPFMGNFGQYQMDEMSRFDVVSDQELM 583

Query: 168 ASRFHGNNNNGVSLTLGLHHNENLPNISATHQHGFLS--QDIHLGMGLEMGSTNN-GNEV 224
           A R+ G NNNGVSLTLGL H ++L   S+TH  GF+     I +G  +++G T   G   
Sbjct: 584 AQRYSG-NNNGVSLTLGLPHCDSL---SSTHHQGFMQTHHGIPIGRRVKIGETEEYGPAT 639

Query: 225 VTG--------------TDYDTIDIQNRKRFSAQSLPDFCG 251
           + G                Y+ ++IQN+KR+ AQ LPDF  
Sbjct: 640 INGGSSTTTAHSSAAAAAAYNGMNIQNQKRYVAQLLPDFVA 680


>AT2G35940.2 | Symbols: BLH1 | BEL1-like homeodomain 1 |
           chr2:15089171-15091699 REVERSE LENGTH=680
          Length = 680

 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 120/281 (42%), Gaps = 62/281 (22%)

Query: 2   QVSNWFINARVRLWKPXXXXXXXXXXXXXXKANGSKE------------SSQSTNKERGS 49
           QVSNWFINARVRLWKP              K  GS E            S  ++N+E+  
Sbjct: 431 QVSNWFINARVRLWKPMVEEMYMEEMKEQAKNMGSMEKTPLDQSNEDSASKSTSNQEKSP 490

Query: 50  SPPNNVTPESGDEIKLEHIKNLQSSXISTNSSVGGGPFQSHSGFQLVGSSDHMIQRSSEM 109
               N          LE +  +Q           G P       +L  S + M+Q    +
Sbjct: 491 MADTNYHMNPNHNGDLEGVTGMQ-----------GSP------KRLRTSDETMMQ---PI 530

Query: 110 QNNSPSSIGNNIRFGNERNHKDLGYHALMTDHGGGFGSLFSSMEDIGMSRFNVTHEQ--L 167
             +  S+    ++   ER         + +D G  F   F   +   MSRF+V  +Q  +
Sbjct: 531 NADFSSNEKLTMKILEER-------QGIRSDGGYPFMGNFGQYQMDEMSRFDVVSDQELM 583

Query: 168 ASRFHGNNNNGVSLTLGLHHNENLPNISATHQHGFLS--QDIHLGMGLEMGSTNN-GNEV 224
           A R+ G NNNGVSLTLGL H ++L   S+TH  GF+     I +G  +++G T   G   
Sbjct: 584 AQRYSG-NNNGVSLTLGLPHCDSL---SSTHHQGFMQTHHGIPIGRRVKIGETEEYGPAT 639

Query: 225 VTG--------------TDYDTIDIQNRKRFSAQSLPDFCG 251
           + G                Y+ ++IQN+KR+ AQ LPDF  
Sbjct: 640 INGGSSTTTAHSSAAAAAAYNGMNIQNQKRYVAQLLPDFVA 680


>AT2G35940.1 | Symbols: BLH1, EDA29 | BEL1-like homeodomain 1 |
           chr2:15089171-15091699 REVERSE LENGTH=680
          Length = 680

 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 120/281 (42%), Gaps = 62/281 (22%)

Query: 2   QVSNWFINARVRLWKPXXXXXXXXXXXXXXKANGSKE------------SSQSTNKERGS 49
           QVSNWFINARVRLWKP              K  GS E            S  ++N+E+  
Sbjct: 431 QVSNWFINARVRLWKPMVEEMYMEEMKEQAKNMGSMEKTPLDQSNEDSASKSTSNQEKSP 490

Query: 50  SPPNNVTPESGDEIKLEHIKNLQSSXISTNSSVGGGPFQSHSGFQLVGSSDHMIQRSSEM 109
               N          LE +  +Q           G P       +L  S + M+Q    +
Sbjct: 491 MADTNYHMNPNHNGDLEGVTGMQ-----------GSP------KRLRTSDETMMQ---PI 530

Query: 110 QNNSPSSIGNNIRFGNERNHKDLGYHALMTDHGGGFGSLFSSMEDIGMSRFNVTHEQ--L 167
             +  S+    ++   ER         + +D G  F   F   +   MSRF+V  +Q  +
Sbjct: 531 NADFSSNEKLTMKILEER-------QGIRSDGGYPFMGNFGQYQMDEMSRFDVVSDQELM 583

Query: 168 ASRFHGNNNNGVSLTLGLHHNENLPNISATHQHGFLS--QDIHLGMGLEMGSTNN-GNEV 224
           A R+ G NNNGVSLTLGL H ++L   S+TH  GF+     I +G  +++G T   G   
Sbjct: 584 AQRYSG-NNNGVSLTLGLPHCDSL---SSTHHQGFMQTHHGIPIGRRVKIGETEEYGPAT 639

Query: 225 VTG--------------TDYDTIDIQNRKRFSAQSLPDFCG 251
           + G                Y+ ++IQN+KR+ AQ LPDF  
Sbjct: 640 INGGSSTTTAHSSAAAAAAYNGMNIQNQKRYVAQLLPDFVA 680