Miyakogusa Predicted Gene

Lj0g3v0200359.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0200359.1 Non Chatacterized Hit- tr|I1MPJ9|I1MPJ9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,30.43,2e-18,C2,C2
membrane targeting protein; no description,NULL; Protein kinase C
conserved region,C2 calcium-,CUFF.12739.1
         (305 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G07310.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...   124   7e-29
AT5G23950.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...    77   2e-14
AT2G13350.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...    57   1e-08
AT1G04540.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...    50   2e-06

>AT1G07310.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr1:2247775-2248833 REVERSE
           LENGTH=352
          Length = 352

 Score =  124 bits (311), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 66/130 (50%), Positives = 82/130 (63%), Gaps = 8/130 (6%)

Query: 1   MTSSRPPPSKSVDLDLTIVSAKHLKNVNWKTGDLKPYVVFWVDPDRRLATKSDDSGNTSP 60
           MTSS P     +DL +T+VSAKHLKNVNW+ GDLKPYVV ++D D  L+T+SDDS +  P
Sbjct: 1   MTSSEP-----LDLVVTVVSAKHLKNVNWRNGDLKPYVVLYLDQDHPLSTRSDDSSSIKP 55

Query: 61  VWNERFTLPLSHPITDSFLTLEIFHSKPSDTPKPLVATVR---XXXXXXXXXXXXXXIRK 117
           VWNER TLPL+  + +S L +E+FHS  SD  K LV +VR                 I  
Sbjct: 56  VWNERITLPLTRSVHESVLNIEVFHSNSSDLAKTLVGSVRFPLARLIDSDGSMIPELINS 115

Query: 118 FTLLRPSGRP 127
             L+RPSGRP
Sbjct: 116 LELVRPSGRP 125


>AT5G23950.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr5:8082789-8083448 FORWARD
           LENGTH=219
          Length = 219

 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 3/122 (2%)

Query: 9   SKSVDLDLTIVSAKHLKNVNWKTGDLKPYVVFWVDPDRRLATKSDDSGNTSPVWNERFTL 68
           S   ++++TI SAK +KNVNW+ G  KPY V W+DP  + +T+ D+ GNT   WNE F +
Sbjct: 3   SHGREVEVTISSAKDIKNVNWRNGPNKPYAVVWIDPKFKSSTRVDEDGNTCTTWNETFVI 62

Query: 69  PL-SHPITDSFLTLEIFHSKPSDTPKPLVATVRXXXXXXXXXXXXXX--IRKFTLLRPSG 125
            L      D  + + I H+   +  KPL+ +                  ++   L RPSG
Sbjct: 63  ALPPANDDDDKVYINIVHAGREENTKPLIGSAHLSLRDVIDDVGFGVPFMKTLKLKRPSG 122

Query: 126 RP 127
           RP
Sbjct: 123 RP 124


>AT2G13350.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
          domain) family protein | chr2:5536525-5537730 REVERSE
          LENGTH=401
          Length = 401

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 6/74 (8%)

Query: 14 LDLTIVSAKHLKNVNWKTGDLKPYVVFWVDPDRRLATKSDDSGNTSPVWNERFTLPLSHP 73
          L+L I+SA+ L  V      +K Y + W+DP+R+L T+ D++G TSP WN++F   L   
Sbjct: 10 LELNIISAQELAPV---ARCMKTYAIAWIDPERKLTTRVDNTGGTSPTWNDKFVFRLDEE 66

Query: 74 I---TDSFLTLEIF 84
                S + +EI+
Sbjct: 67 ALYDATSIVVIEIY 80


>AT1G04540.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
          domain) family protein | chr1:1237256-1239061 FORWARD
          LENGTH=601
          Length = 601

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 6/74 (8%)

Query: 14 LDLTIVSAKHLKNVNWKTGDLKPYVVFWVDPDRRLATKSDDSGNTSPVWNERFTLPLSHP 73
          L+L I+SA+ L  V  KT   K Y V WV  +R+L T+ D +G T+P WN++F   ++  
Sbjct: 11 LELNIISAQDLAPVARKT---KTYAVAWVHSERKLTTRVDYNGGTNPTWNDKFVFRVNEE 67

Query: 74 IT---DSFLTLEIF 84
                S + +EI+
Sbjct: 68 FLYADTSAVVIEIY 81