Miyakogusa Predicted Gene
- Lj0g3v0200239.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0200239.1 tr|G7LAU3|G7LAU3_MEDTR U-box domain-containing
protein OS=Medicago truncatula GN=MTR_8g027140 PE=4
S,77.19,0,Arm,Armadillo; U-box,U box domain; coiled-coil,NULL;
ARM_REPEAT,Armadillo; ARM repeat,Armadillo-type,CUFF.12699.1
(986 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76390.2 | Symbols: | ARM repeat superfamily protein | chr1:... 219 8e-57
AT1G76390.1 | Symbols: | ARM repeat superfamily protein | chr1:... 219 8e-57
AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | senescence-associ... 202 7e-52
AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat fam... 157 3e-38
AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat fam... 157 3e-38
AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat fam... 157 5e-38
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 102 1e-21
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 91 5e-18
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 84 4e-16
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 84 4e-16
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 79 2e-14
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 79 2e-14
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 75 2e-13
AT1G49780.1 | Symbols: PUB26 | plant U-box 26 | chr1:18429024-18... 74 5e-13
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10... 74 7e-13
AT1G60190.1 | Symbols: | ARM repeat superfamily protein | chr1:... 71 3e-12
AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23548... 71 4e-12
AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 | chr4:11356143... 71 4e-12
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 70 8e-12
AT5G51270.1 | Symbols: | U-box domain-containing protein kinase... 70 8e-12
AT4G36550.1 | Symbols: | ARM repeat superfamily protein | chr4:... 69 1e-11
AT3G19380.1 | Symbols: PUB25 | plant U-box 25 | chr3:6714602-671... 67 9e-11
AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |... 65 2e-10
AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 | chr3:64... 65 2e-10
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 65 3e-10
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 65 3e-10
AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY p... 64 4e-10
AT3G61390.2 | Symbols: | RING/U-box superfamily protein | chr3:... 64 6e-10
AT5G61560.1 | Symbols: | U-box domain-containing protein kinase... 64 6e-10
AT5G61560.2 | Symbols: | U-box domain-containing protein kinase... 64 6e-10
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 63 9e-10
AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 | chr1:34... 63 1e-09
AT5G09800.1 | Symbols: | ARM repeat superfamily protein | chr5:... 63 1e-09
AT5G57035.1 | Symbols: | U-box domain-containing protein kinase... 62 1e-09
AT5G01830.1 | Symbols: | ARM repeat superfamily protein | chr5:... 62 2e-09
AT4G25160.1 | Symbols: | U-box domain-containing protein kinase... 62 2e-09
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 62 2e-09
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 62 2e-09
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:... 61 3e-09
AT5G37490.1 | Symbols: | ARM repeat superfamily protein | chr5:... 61 3e-09
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 61 4e-09
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 61 4e-09
AT3G49810.1 | Symbols: | ARM repeat superfamily protein | chr3:... 60 5e-09
AT3G52450.1 | Symbols: PUB22 | plant U-box 22 | chr3:19440943-19... 60 7e-09
AT5G65920.1 | Symbols: | ARM repeat superfamily protein | chr5:... 60 7e-09
AT1G01660.1 | Symbols: | RING/U-box superfamily protein | chr1:... 59 2e-08
AT2G35930.1 | Symbols: PUB23 | plant U-box 23 | chr2:15083101-15... 58 3e-08
AT5G65500.1 | Symbols: | U-box domain-containing protein kinase... 58 3e-08
AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 | chr1:24... 58 4e-08
AT1G01670.1 | Symbols: | RING/U-box superfamily protein | chr1:... 58 4e-08
AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 57 4e-08
AT2G45920.1 | Symbols: | U-box domain-containing protein | chr2... 57 7e-08
AT2G19410.1 | Symbols: | U-box domain-containing protein kinase... 55 2e-07
AT3G49060.2 | Symbols: | U-box domain-containing protein kinase... 55 2e-07
AT4G16490.1 | Symbols: | ARM repeat superfamily protein | chr4:... 55 2e-07
AT3G49060.1 | Symbols: | U-box domain-containing protein kinase... 55 2e-07
AT3G01400.1 | Symbols: | ARM repeat superfamily protein | chr3:... 55 3e-07
AT5G61550.1 | Symbols: | U-box domain-containing protein kinase... 53 8e-07
AT3G11840.1 | Symbols: PUB24 | plant U-box 24 | chr3:3736578-373... 53 9e-07
AT5G61550.2 | Symbols: | U-box domain-containing protein kinase... 53 9e-07
>AT1G76390.2 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 219 bits (558), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 232/781 (29%), Positives = 376/781 (48%), Gaps = 56/781 (7%)
Query: 250 QSLGSQILEP-----LQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAE----GNKL- 299
QS S EP ++F CP+T VM +PV + TFER AIEKW E G L
Sbjct: 11 QSDNSSQFEPGIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLS 70
Query: 300 CPLTLIPLDISILRPNKTLKQSIEEWKDRNTIIKIGALKEKIQSGD---DVLDDLGTLKE 356
CP+T L I+ L P+ L+ +IEEW+ RN +K+ ++ + G+ ++L L ++E
Sbjct: 71 CPITSKELSITDLSPSIALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVRE 130
Query: 357 LCEQKDQHREWVILENYIPVLIQILGSRNREIRNLALAILYSLAKDNEEAKEKIAAVDNA 416
+C + R+ V + ++ +L S + E+R AL L + + +EE+K +A D
Sbjct: 131 ICRNIRKIRQRVCNPQLVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGD-T 189
Query: 417 IESIVPSLGRRPGE-RKIAVTLLLELSKCDLAREHIGKVQGCILLLV--TMSSGDDNQAA 473
+ +IV L + P + R+ AV++L ELSK + E IG + G I+LLV T S ++
Sbjct: 190 VRTIVKFLSQEPSKGREAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENVSTV 249
Query: 474 KDATELLENLSYSDQNVIQMAKANYFKHLLQRLSTGPDDVKMIMAKTLAEMELTDHNKEL 533
+ A + L NL S++NV QMA + LL +L G + K+ MA L + L + K +
Sbjct: 250 EKADKTLTNLERSEENVRQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLALNNDVKVI 309
Query: 534 LFDCGVLTPLLHLFSHNDLQVKTEATKALRNLSSLKKNGLEMIRQGAGRPLLGLLFL--H 591
+ V + L+ L D+ + A AL N+SS + + +I G PL+ LF
Sbjct: 310 VAQT-VGSSLIDLMRTRDMSQREAALGALNNISSFEGSAKLLINTGILPPLIKDLFYVGP 368
Query: 592 NMHTSSLWEDVAAIVMQLAASAISQDAQAPVS----LLESDEDVFNLFCLIRVTLPEVQQ 647
N L E A I+ + D + PV L S+E V NL L T PE+Q
Sbjct: 369 NQLPIRLKEVSATILANIVNIGYDFD-KVPVGPHHQTLVSEEIVENLLQLTSNTGPEIQG 427
Query: 648 KIILTFYILCQSPLASY-IRTKLNECPAIPDLVRLWE-NENLNLRASAVKLLSCLVESCD 705
K++ L P + + + + AI LV+ E +EN +LR +++KLL +
Sbjct: 428 KLLAVLVGLTSCPNSVINVVSAIRNSAAIISLVQFVEIHENDDLRLASIKLLHNISPHMS 487
Query: 706 EAI---IVEIVDQKCIDTLIRILKSSSDE--EEIHSAMGIICYIPEIDQI-TQWLLDAGA 759
E + + V Q + +L+ I+ ++ EE +A G++ +PE D + T LL GA
Sbjct: 488 EELANALRSTVGQ--LGSLVSIISENTPTITEEQAAAAGLLAELPERDLVLTMRLLREGA 545
Query: 760 LPIIYRHV---KDGRDRDLQRSK-LVENATGALCRFTVPTNLEWQKT--AAETGIITVLV 813
I + + G R ++ + +E L R T E T E + ++ +
Sbjct: 546 FEKIISKIVGIRQGEIRGIRFERTFLEGLVSILARITFALTKETDATLFCCEKNLPSLFL 605
Query: 814 QLLENGTTLTKQRA-ALSLAQFSESSLRLSTPIPKRKG-------LCCFSAPAEI--GCR 863
LL++ + QRA A +L S S L T IP+ C S P + C+
Sbjct: 606 DLLQSNSQDNIQRASATALENLSLESKNL-TKIPELPPPTYCVSIFSCLSKPPVVLGICK 664
Query: 864 VHGGKCTVNSSFCLLEAEAVGPLTRILGESDPGVCEASLDALLTLIE-GERLLSGSKVLA 922
+H G C+V SFCL+E +AV L +L + V +L AL TL+E G ++ G +++
Sbjct: 665 IHQGICSVRESFCLVEGQAVDKLVDLLDHENDKVVGPALAALSTLLEDGLDVVQGVRLID 724
Query: 923 DAKAI-PLIIKFLVSTSSGLQEKSLQALERIFQLLEFRQMYGASAQM--PLVDLTQRGTF 979
+A I P++ L + + L+ +++ +ERI ++ E + G + LVD Q F
Sbjct: 725 EADGITPILNVLLENRTENLRIRAVWMVERILRIEEIAREVGEEQNVTAALVDAFQNADF 784
Query: 980 Q 980
+
Sbjct: 785 R 785
>AT1G76390.1 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 219 bits (558), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 232/781 (29%), Positives = 376/781 (48%), Gaps = 56/781 (7%)
Query: 250 QSLGSQILEP-----LQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAE----GNKL- 299
QS S EP ++F CP+T VM +PV + TFER AIEKW E G L
Sbjct: 11 QSDNSSQFEPGIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLS 70
Query: 300 CPLTLIPLDISILRPNKTLKQSIEEWKDRNTIIKIGALKEKIQSGD---DVLDDLGTLKE 356
CP+T L I+ L P+ L+ +IEEW+ RN +K+ ++ + G+ ++L L ++E
Sbjct: 71 CPITSKELSITDLSPSIALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVRE 130
Query: 357 LCEQKDQHREWVILENYIPVLIQILGSRNREIRNLALAILYSLAKDNEEAKEKIAAVDNA 416
+C + R+ V + ++ +L S + E+R AL L + + +EE+K +A D
Sbjct: 131 ICRNIRKIRQRVCNPQLVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGD-T 189
Query: 417 IESIVPSLGRRPGE-RKIAVTLLLELSKCDLAREHIGKVQGCILLLV--TMSSGDDNQAA 473
+ +IV L + P + R+ AV++L ELSK + E IG + G I+LLV T S ++
Sbjct: 190 VRTIVKFLSQEPSKGREAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENVSTV 249
Query: 474 KDATELLENLSYSDQNVIQMAKANYFKHLLQRLSTGPDDVKMIMAKTLAEMELTDHNKEL 533
+ A + L NL S++NV QMA + LL +L G + K+ MA L + L + K +
Sbjct: 250 EKADKTLTNLERSEENVRQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLALNNDVKVI 309
Query: 534 LFDCGVLTPLLHLFSHNDLQVKTEATKALRNLSSLKKNGLEMIRQGAGRPLLGLLFL--H 591
+ V + L+ L D+ + A AL N+SS + + +I G PL+ LF
Sbjct: 310 VAQT-VGSSLIDLMRTRDMSQREAALGALNNISSFEGSAKLLINTGILPPLIKDLFYVGP 368
Query: 592 NMHTSSLWEDVAAIVMQLAASAISQDAQAPVS----LLESDEDVFNLFCLIRVTLPEVQQ 647
N L E A I+ + D + PV L S+E V NL L T PE+Q
Sbjct: 369 NQLPIRLKEVSATILANIVNIGYDFD-KVPVGPHHQTLVSEEIVENLLQLTSNTGPEIQG 427
Query: 648 KIILTFYILCQSPLASY-IRTKLNECPAIPDLVRLWE-NENLNLRASAVKLLSCLVESCD 705
K++ L P + + + + AI LV+ E +EN +LR +++KLL +
Sbjct: 428 KLLAVLVGLTSCPNSVINVVSAIRNSAAIISLVQFVEIHENDDLRLASIKLLHNISPHMS 487
Query: 706 EAI---IVEIVDQKCIDTLIRILKSSSDE--EEIHSAMGIICYIPEIDQI-TQWLLDAGA 759
E + + V Q + +L+ I+ ++ EE +A G++ +PE D + T LL GA
Sbjct: 488 EELANALRSTVGQ--LGSLVSIISENTPTITEEQAAAAGLLAELPERDLVLTMRLLREGA 545
Query: 760 LPIIYRHV---KDGRDRDLQRSK-LVENATGALCRFTVPTNLEWQKT--AAETGIITVLV 813
I + + G R ++ + +E L R T E T E + ++ +
Sbjct: 546 FEKIISKIVGIRQGEIRGIRFERTFLEGLVSILARITFALTKETDATLFCCEKNLPSLFL 605
Query: 814 QLLENGTTLTKQRA-ALSLAQFSESSLRLSTPIPKRKG-------LCCFSAPAEI--GCR 863
LL++ + QRA A +L S S L T IP+ C S P + C+
Sbjct: 606 DLLQSNSQDNIQRASATALENLSLESKNL-TKIPELPPPTYCVSIFSCLSKPPVVLGICK 664
Query: 864 VHGGKCTVNSSFCLLEAEAVGPLTRILGESDPGVCEASLDALLTLIE-GERLLSGSKVLA 922
+H G C+V SFCL+E +AV L +L + V +L AL TL+E G ++ G +++
Sbjct: 665 IHQGICSVRESFCLVEGQAVDKLVDLLDHENDKVVGPALAALSTLLEDGLDVVQGVRLID 724
Query: 923 DAKAI-PLIIKFLVSTSSGLQEKSLQALERIFQLLEFRQMYGASAQM--PLVDLTQRGTF 979
+A I P++ L + + L+ +++ +ERI ++ E + G + LVD Q F
Sbjct: 725 EADGITPILNVLLENRTENLRIRAVWMVERILRIEEIAREVGEEQNVTAALVDAFQNADF 784
Query: 980 Q 980
+
Sbjct: 785 R 785
>AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 |
senescence-associated E3 ubiquitin ligase 1 |
chr1:7217812-7220609 FORWARD LENGTH=801
Length = 801
Score = 202 bits (515), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 215/760 (28%), Positives = 361/760 (47%), Gaps = 49/760 (6%)
Query: 261 QSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNK-----LCPLTLIPLDISILRPN 315
++F CP+T +VM DPV + TFER AIEKW E CPLT L + + +
Sbjct: 25 EAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSAS 84
Query: 316 KTLKQSIEEWKDRNTIIKIGALKEKIQSGD---DVLDDLGTLKELCEQKDQHREWVILEN 372
L+ +IEEW+ RN K+ ++ + G+ D+L L ++++C +R V
Sbjct: 85 IALRNTIEEWRSRNDAAKLDIARQSLFLGNAETDILQALMHVRQICRTIRSNRHGVRNSQ 144
Query: 373 YIPVLIQILGSRNREIRNLALAILYSLAKDNEEAKEKIAAVDNAIESIVPSLGRRPGE-R 431
I ++I +L S + +R AL L + + ++E+K I A + + ++V L P + R
Sbjct: 145 LIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESK-AIVAEGDTVRTLVKFLSHEPSKGR 203
Query: 432 KIAVTLLLELSKCDLAREHIGKVQGCILLLVTMSSGDDNQAA--KDATELLENLSYSDQN 489
+ AV+LL ELSK + E IG + G ++LLV ++S + + + A LEN+ S++
Sbjct: 204 EAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSENVSIVEKADRTLENMERSEEI 263
Query: 490 VIQMAKANYFKHLLQRLSTGPDDVKMIMAKTLAEMELTDHNKELLFDCGVLTPLLHLFSH 549
V QMA + LL +L G + K+ MA L E+ L + K L+ V + L+ L
Sbjct: 264 VRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDVKVLVAQT-VGSSLVDLMRS 322
Query: 550 NDLQVKTEATKALRNLSSLKKNGLEMIRQGAGRPLLGLLFLHNMHTSSL-WEDVAAIVMQ 608
D+ + A KAL +SS + + +I +G PL+ LF + + ++V+A ++
Sbjct: 323 GDMPQREAALKALNKISSFEGSAKVLISKGILPPLIKDLFYVGPNNLPIRLKEVSATIL- 381
Query: 609 LAASAISQDAQAPVSLLESDEDVFNLFCLIRVTLPEVQQKIILTFYILCQSP-LASYIRT 667
A+ ++ + L S+ V NL LI T P +Q K++ L P +
Sbjct: 382 --ANIVNIGYDFDKATLVSENRVENLLHLISNTGPAIQCKLLEVLVGLTSCPKTVPKVVY 439
Query: 668 KLNECPAIPDLVRLWE-NENLNLRASAVKLLSCLVESCDEAIIVEIVDQKC-----IDTL 721
+ AI LV+ E EN +LR +++KLL L E E+ C + +L
Sbjct: 440 AIKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSE----ELAKALCGTAGQLGSL 495
Query: 722 IRILKSSSD-EEEIHSAMGIICYIPEID-QITQWLLDAGALPIIYRHVKDGRDRDLQRSK 779
+ I+ + EE +A G++ +P+ D +TQ +L+ GA I V R D++ +
Sbjct: 496 VAIISEKTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKIISKVFGIRQGDIKGMR 555
Query: 780 LVENATGALCRFTVPTNLEWQKTA------AETGIITVLVQLLE-NGTTLTKQRAALSLA 832
V L R + K A E + ++ + LL+ NG + +A++L
Sbjct: 556 FVNPFLEGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQDNIQMVSAMALE 615
Query: 833 QFSESSLRLS-TPIPKRKGLC-----CFSAPAEIG--CRVHGGKCTVNSSFCLLEAEAVG 884
S S++L+ P P C C P + C++H G C++ +FCL+E AV
Sbjct: 616 NLSLESIKLTRMPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGICSLRETFCLVEGGAVE 675
Query: 885 PLTRILGESDPGVCEASLDALLTLIE-GERLLSGSKVLADAKAIPLIIKFLVST-SSGLQ 942
L +L + V EA+L AL +L+E G + G K+L +A I I+ L + L
Sbjct: 676 KLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILNVLRENRTERLT 735
Query: 943 EKSLQALERIFQLLEFRQMYG--ASAQMPLVDLTQRGTFQ 980
+++ +ERI ++ + + S LVD Q F+
Sbjct: 736 RRAVWMVERILRIEDIAREVAEEQSLSAALVDAFQNADFR 775
>AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25922001-25925374 REVERSE LENGTH=1033
Length = 1033
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 191/746 (25%), Positives = 339/746 (45%), Gaps = 56/746 (7%)
Query: 235 ASSPRERQLKHLAKRQSLGSQILE----PLQSFYCPITHDVMVDPVETSSAHTFERSAIE 290
+++ +R+ +L++ S+ Q+ + P Q+F CP+T ++M DPV T + T ER A+
Sbjct: 218 SNASSQRKYGNLSESLSMLPQVTQFMEPPYQAFICPLTKEIMEDPVTTETGVTCERQAVI 277
Query: 291 KWV-AEGNK---LCPLTLIPLDISILRPNKTLKQSIEEWKDRNTIIKIGALKEKIQSGDD 346
+W + GN CP+T L L N LK I+EWK RN +I + G
Sbjct: 278 EWFDSFGNSDEINCPVTGQKLTTE-LSANVVLKTIIQEWKVRNEAARIKVAHAALSLGGS 336
Query: 347 ---VLDDLGTLKELCEQKDQHREWVILENYIPVLIQILGSRNREIRNLALAILYSLAKDN 403
V+D L L+ CE K+ ++ V I +L + L R++++R L L +LA +
Sbjct: 337 ESMVIDALRDLQMTCEGKEYNKVQVREAGIIQLLDRYLTYRSKDVRFELLKFLRTLADEE 396
Query: 404 EEAKEKIAAVDNAIESIVPSLG--RRPGERKIAVTLLLELSKCDLAREHIGKVQGCILLL 461
+ +++ + ++ LG +P R A LLLELSK A E IG +G IL+L
Sbjct: 397 TDDGKEMIVKTITMSCVIKLLGSSHQPV-RHAAQALLLELSKSQHACEKIGTARGAILML 455
Query: 462 VTMSSGD--DNQAAKDATELLENLSYSDQNVIQMAKANYFKHLLQRLSTGPDDVKMIMAK 519
VT D+ A++ + ++L NL +N+ QMA++ + LL L+ G ++ ++ MA
Sbjct: 456 VTAKYNRELDSFASETSDQILRNLEKCPENIKQMAESGLLEPLLGHLAEGSEETQVAMAA 515
Query: 520 TLAEMELTDHNKELLFDCGVLTPLLHLFSHNDLQVKTEATKALRNLSSLKKNGLEMIRQG 579
L E+++ H K+ L+ L ++ + A KAL ++S N ++ G
Sbjct: 516 YLVEIDI-GHEKKTYVAEKACPALIGLVQSENIDARRAAFKALAHISLYHPNNKILVEVG 574
Query: 580 AGRPLLGLLFLHNMHTSSL--WEDVAAIVMQLAASAISQDA---QAPVSLLESDEDVFNL 634
+ ++ +F + + + + A I+ + S + + L SD V+N+
Sbjct: 575 IIKIMVEEMFTKRVFSDLMNSRNEAATILANILESGLEHETFEVNTHGHTLGSDYFVYNI 634
Query: 635 FCLIRVTLP-EVQQKIILTFYILCQSPLA-SYIRTKLNECPAIPDLVRLWENENLNLRAS 692
+++ + P ++ +I L +SP A + I + + E A ++ L N + L
Sbjct: 635 IHMLKNSSPDDLNIDLIRILLSLSKSPRAMATIVSVIKETDASFAMIELINNPHDELGVG 694
Query: 693 AVKLLSCLVESCDEAIIVEIVDQKC-IDTLIRILKSSSDEEEIHS-AMGIICYIPEID-- 748
A+KLL L + + + + LI+ ++ E H+ + ++ +P +
Sbjct: 695 ALKLLIALTPYIGHTLSERLCKTRGQPENLIQCPVEANQITEKHAVSAKLLAKLPHQNLT 754
Query: 749 ---QITQWLLDAGALPIIYRHVKDGRDRDLQRSKLVENATGALCRFTVPTNLEWQKT--A 803
+ + + L I+ + G + +E G L RFT T E Q A
Sbjct: 755 LNLALVNESIVSEILHAIHLIQRSGARTSRYATDFLEGLVGILVRFTT-TLYEPQMMYLA 813
Query: 804 AETGIITVLVQLLENGTTLTKQR-AALSLAQFSESSLRLSTPIPKR--KGLCCFSAPAEI 860
+ +V V LL ++ QR +A L S +++ LS P R K + S P
Sbjct: 814 RNHDLTSVFVDLLMKTSSDEVQRLSATGLENLSSTTMTLSRPPQPRSTKFMGSLSMPRSF 873
Query: 861 G-----------CRVHGGKCTVNSSFCLLEAEAVGPLTRILGESDPGVCEASLDALLTL- 908
C +H G C+ ++FCL+EA A+ L L V E++L A+ TL
Sbjct: 874 SLRSSKKKQIEICAIHRGVCSAKNTFCLVEANAITKLLACLQSDKVEVVESALAAICTLL 933
Query: 909 ---IEGERLLSGSKVLADAKAIPLII 931
+E E+ LS +L++ A+ LI+
Sbjct: 934 DDKVEVEKSLS---MLSEMNAVQLIL 956
>AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1035
Length = 1035
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 191/746 (25%), Positives = 339/746 (45%), Gaps = 56/746 (7%)
Query: 235 ASSPRERQLKHLAKRQSLGSQILE----PLQSFYCPITHDVMVDPVETSSAHTFERSAIE 290
+++ +R+ +L++ S+ Q+ + P Q+F CP+T ++M DPV T + T ER A+
Sbjct: 218 SNASSQRKYGNLSESLSMLPQVTQFMEPPYQAFICPLTKEIMEDPVTTETGVTCERQAVI 277
Query: 291 KWV-AEGNK---LCPLTLIPLDISILRPNKTLKQSIEEWKDRNTIIKIGALKEKIQSGDD 346
+W + GN CP+T L L N LK I+EWK RN +I + G
Sbjct: 278 EWFDSFGNSDEINCPVTGQKLTTE-LSANVVLKTIIQEWKVRNEAARIKVAHAALSLGGS 336
Query: 347 ---VLDDLGTLKELCEQKDQHREWVILENYIPVLIQILGSRNREIRNLALAILYSLAKDN 403
V+D L L+ CE K+ ++ V I +L + L R++++R L L +LA +
Sbjct: 337 ESMVIDALRDLQMTCEGKEYNKVQVREAGIIQLLDRYLTYRSKDVRFELLKFLRTLADEE 396
Query: 404 EEAKEKIAAVDNAIESIVPSLG--RRPGERKIAVTLLLELSKCDLAREHIGKVQGCILLL 461
+ +++ + ++ LG +P R A LLLELSK A E IG +G IL+L
Sbjct: 397 TDDGKEMIVKTITMSCVIKLLGSSHQPV-RHAAQALLLELSKSQHACEKIGTARGAILML 455
Query: 462 VTMSSGD--DNQAAKDATELLENLSYSDQNVIQMAKANYFKHLLQRLSTGPDDVKMIMAK 519
VT D+ A++ + ++L NL +N+ QMA++ + LL L+ G ++ ++ MA
Sbjct: 456 VTAKYNRELDSFASETSDQILRNLEKCPENIKQMAESGLLEPLLGHLAEGSEETQVAMAA 515
Query: 520 TLAEMELTDHNKELLFDCGVLTPLLHLFSHNDLQVKTEATKALRNLSSLKKNGLEMIRQG 579
L E+++ H K+ L+ L ++ + A KAL ++S N ++ G
Sbjct: 516 YLVEIDI-GHEKKTYVAEKACPALIGLVQSENIDARRAAFKALAHISLYHPNNKILVEVG 574
Query: 580 AGRPLLGLLFLHNMHTSSL--WEDVAAIVMQLAASAISQDA---QAPVSLLESDEDVFNL 634
+ ++ +F + + + + A I+ + S + + L SD V+N+
Sbjct: 575 IIKIMVEEMFTKRVFSDLMNSRNEAATILANILESGLEHETFEVNTHGHTLGSDYFVYNI 634
Query: 635 FCLIRVTLP-EVQQKIILTFYILCQSPLA-SYIRTKLNECPAIPDLVRLWENENLNLRAS 692
+++ + P ++ +I L +SP A + I + + E A ++ L N + L
Sbjct: 635 IHMLKNSSPDDLNIDLIRILLSLSKSPRAMATIVSVIKETDASFAMIELINNPHDELGVG 694
Query: 693 AVKLLSCLVESCDEAIIVEIVDQKC-IDTLIRILKSSSDEEEIHS-AMGIICYIPEID-- 748
A+KLL L + + + + LI+ ++ E H+ + ++ +P +
Sbjct: 695 ALKLLIALTPYIGHTLSERLCKTRGQPENLIQCPVEANQITEKHAVSAKLLAKLPHQNLT 754
Query: 749 ---QITQWLLDAGALPIIYRHVKDGRDRDLQRSKLVENATGALCRFTVPTNLEWQKT--A 803
+ + + L I+ + G + +E G L RFT T E Q A
Sbjct: 755 LNLALVNESIVSEILHAIHLIQRSGARTSRYATDFLEGLVGILVRFTT-TLYEPQMMYLA 813
Query: 804 AETGIITVLVQLLENGTTLTKQR-AALSLAQFSESSLRLSTPIPKR--KGLCCFSAPAEI 860
+ +V V LL ++ QR +A L S +++ LS P R K + S P
Sbjct: 814 RNHDLTSVFVDLLMKTSSDEVQRLSATGLENLSSTTMTLSRPPQPRSTKFMGSLSMPRSF 873
Query: 861 G-----------CRVHGGKCTVNSSFCLLEAEAVGPLTRILGESDPGVCEASLDALLTL- 908
C +H G C+ ++FCL+EA A+ L L V E++L A+ TL
Sbjct: 874 SLRSSKKKQIEICAIHRGVCSAKNTFCLVEANAITKLLACLQSDKVEVVESALAAICTLL 933
Query: 909 ---IEGERLLSGSKVLADAKAIPLII 931
+E E+ LS +L++ A+ LI+
Sbjct: 934 DDKVEVEKSLS---MLSEMNAVQLIL 956
>AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1061
Length = 1061
Score = 157 bits (396), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 191/746 (25%), Positives = 339/746 (45%), Gaps = 56/746 (7%)
Query: 235 ASSPRERQLKHLAKRQSLGSQILE----PLQSFYCPITHDVMVDPVETSSAHTFERSAIE 290
+++ +R+ +L++ S+ Q+ + P Q+F CP+T ++M DPV T + T ER A+
Sbjct: 218 SNASSQRKYGNLSESLSMLPQVTQFMEPPYQAFICPLTKEIMEDPVTTETGVTCERQAVI 277
Query: 291 KWV-AEGNK---LCPLTLIPLDISILRPNKTLKQSIEEWKDRNTIIKIGALKEKIQSGDD 346
+W + GN CP+T L L N LK I+EWK RN +I + G
Sbjct: 278 EWFDSFGNSDEINCPVTGQKLTTE-LSANVVLKTIIQEWKVRNEAARIKVAHAALSLGGS 336
Query: 347 ---VLDDLGTLKELCEQKDQHREWVILENYIPVLIQILGSRNREIRNLALAILYSLAKDN 403
V+D L L+ CE K+ ++ V I +L + L R++++R L L +LA +
Sbjct: 337 ESMVIDALRDLQMTCEGKEYNKVQVREAGIIQLLDRYLTYRSKDVRFELLKFLRTLADEE 396
Query: 404 EEAKEKIAAVDNAIESIVPSLG--RRPGERKIAVTLLLELSKCDLAREHIGKVQGCILLL 461
+ +++ + ++ LG +P R A LLLELSK A E IG +G IL+L
Sbjct: 397 TDDGKEMIVKTITMSCVIKLLGSSHQPV-RHAAQALLLELSKSQHACEKIGTARGAILML 455
Query: 462 VTMSSGD--DNQAAKDATELLENLSYSDQNVIQMAKANYFKHLLQRLSTGPDDVKMIMAK 519
VT D+ A++ + ++L NL +N+ QMA++ + LL L+ G ++ ++ MA
Sbjct: 456 VTAKYNRELDSFASETSDQILRNLEKCPENIKQMAESGLLEPLLGHLAEGSEETQVAMAA 515
Query: 520 TLAEMELTDHNKELLFDCGVLTPLLHLFSHNDLQVKTEATKALRNLSSLKKNGLEMIRQG 579
L E+++ H K+ L+ L ++ + A KAL ++S N ++ G
Sbjct: 516 YLVEIDI-GHEKKTYVAEKACPALIGLVQSENIDARRAAFKALAHISLYHPNNKILVEVG 574
Query: 580 AGRPLLGLLFLHNMHTSSL--WEDVAAIVMQLAASAISQDA---QAPVSLLESDEDVFNL 634
+ ++ +F + + + + A I+ + S + + L SD V+N+
Sbjct: 575 IIKIMVEEMFTKRVFSDLMNSRNEAATILANILESGLEHETFEVNTHGHTLGSDYFVYNI 634
Query: 635 FCLIRVTLP-EVQQKIILTFYILCQSPLA-SYIRTKLNECPAIPDLVRLWENENLNLRAS 692
+++ + P ++ +I L +SP A + I + + E A ++ L N + L
Sbjct: 635 IHMLKNSSPDDLNIDLIRILLSLSKSPRAMATIVSVIKETDASFAMIELINNPHDELGVG 694
Query: 693 AVKLLSCLVESCDEAIIVEIVDQKC-IDTLIRILKSSSDEEEIHS-AMGIICYIPEID-- 748
A+KLL L + + + + LI+ ++ E H+ + ++ +P +
Sbjct: 695 ALKLLIALTPYIGHTLSERLCKTRGQPENLIQCPVEANQITEKHAVSAKLLAKLPHQNLT 754
Query: 749 ---QITQWLLDAGALPIIYRHVKDGRDRDLQRSKLVENATGALCRFTVPTNLEWQKT--A 803
+ + + L I+ + G + +E G L RFT T E Q A
Sbjct: 755 LNLALVNESIVSEILHAIHLIQRSGARTSRYATDFLEGLVGILVRFTT-TLYEPQMMYLA 813
Query: 804 AETGIITVLVQLLENGTTLTKQR-AALSLAQFSESSLRLSTPIPKR--KGLCCFSAPAEI 860
+ +V V LL ++ QR +A L S +++ LS P R K + S P
Sbjct: 814 RNHDLTSVFVDLLMKTSSDEVQRLSATGLENLSSTTMTLSRPPQPRSTKFMGSLSMPRSF 873
Query: 861 G-----------CRVHGGKCTVNSSFCLLEAEAVGPLTRILGESDPGVCEASLDALLTL- 908
C +H G C+ ++FCL+EA A+ L L V E++L A+ TL
Sbjct: 874 SLRSSKKKQIEICAIHRGVCSAKNTFCLVEANAITKLLACLQSDKVEVVESALAAICTLL 933
Query: 909 ---IEGERLLSGSKVLADAKAIPLII 931
+E E+ LS +L++ A+ LI+
Sbjct: 934 DDKVEVEKSLS---MLSEMNAVQLIL 956
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 141/541 (26%), Positives = 230/541 (42%), Gaps = 66/541 (12%)
Query: 19 IIETIGEFVSHADNVLVNKDSFNELAAYMERITPILKELRKEKVSNSETFNHAIEVMSRE 78
+I++I E S +D+V K L+ + + P+L+E+R + S+SE N + V +
Sbjct: 13 LIDSINEIASISDSVTPMKKHCANLSRRLSLLLPMLEEIRDNQESSSEVVNALLSV-KQS 71
Query: 79 IKDAKQLAQECSEKSKFYLLVNCRSIVVRLEKHTKELSKAIALLPLATTGLSSGIMEEIE 138
+ AK L S SK YL++ ++V+ +K T L +A++++P +S + E++E
Sbjct: 72 LLHAKDLLSFVSHVSKIYLVLERDQVMVKFQKVTSLLEQALSIIPYENLEISDELKEQVE 131
Query: 139 ----KLRENM-QTAGFXXXXXXXXXXXXXXSG---IRENNVDRLYANNLVI-----LISE 185
+LR ++ + G SG + E+++ R A L + L E
Sbjct: 132 LVLVQLRRSLGKRGGDVYDDELYKDVLSLYSGRGSVMESDMVRRVAEKLQLMTITDLTQE 191
Query: 186 ALGITNQRSTXXXXXXXXXXXXXNARVEKELFEARQM--DQIIALLERADVASSPRERQL 243
+L + + S+ E FE M +I ++ + +L
Sbjct: 192 SLALLDMVSSS------------GGDDPGESFEKMSMVLKKIKDFVQTYNPNLDDAPLRL 239
Query: 244 KH-LAKRQSLGSQILEPLQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPL 302
K L K + +L P + F CPI+ ++M DPV SS T+ER I+KW+ G+ CP
Sbjct: 240 KSSLPKSRDDDRDMLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPK 299
Query: 303 TLIPLDISILRPNKTLKQSIEEWKDRNTI----------------------------IKI 334
T L I+ PN L+ I +W + N I I+
Sbjct: 300 TQETLTSDIMTPNYVLRSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEE 359
Query: 335 GALKEKIQSGDDVLDDLGTLKELCEQKDQHREWVILENYIPVLIQILGSRN--REIRNLA 392
LK Q +D G ++ L +Q + +R + IP+L+ +L N R +
Sbjct: 360 LLLKLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAV 419
Query: 393 LAIL-YSLAKDNEEAKEKIAAVDNAIESIVPSLGRRPGE-RKIAVTLLLELSKCDLAREH 450
+IL S+ ++N K KI A+ IV L + E R+ A L LS D +
Sbjct: 420 TSILNLSICQEN---KGKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVT 476
Query: 451 IGKVQGCILLLVTMSSGDDNQAAKDATELLENLSYSDQNVIQMAKANYFKHLLQRLSTGP 510
IG G I LVT+ S + KDA L NL N + +A +L RL T P
Sbjct: 477 IGAA-GAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVP-VLMRLLTEP 534
Query: 511 D 511
+
Sbjct: 535 E 535
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 125/519 (24%), Positives = 217/519 (41%), Gaps = 59/519 (11%)
Query: 37 KDSFNELAAYMERITPILKELRKEKVSNSETFNHAIEVMSREIKDAKQLAQECSEKSKFY 96
K+ FN L ++ + P L E+R S + H + + + AK+L + CS SK Y
Sbjct: 76 KECFN-LVRRLKILIPFLDEIRG---FESPSCKHFLNRLRKVFLAAKKLLETCSNGSKIY 131
Query: 97 LLVNCRSIVVRLEKHTKELSKAIALLPLATTGLSSGIMEEIEKL------------RENM 144
+ ++ +++ R ++L++ + P +S +EI+ L +++
Sbjct: 132 MALDGETMMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEIDSLCKQLKKAKRRTDTQDI 191
Query: 145 QTAGFXXXXXXXXXXXXXXSGIRENNVDRLYANNLVILISEALGITNQRSTXXXXXXXXX 204
+ A S I E +L + L +E + I +
Sbjct: 192 ELAVDMMVVFSKTDPRNADSAIIERLAKKLELQTIDDLKTETIAIQS---------LIQD 242
Query: 205 XXXXNARVEKELFEARQMDQIIALLERADVASSPRERQLKHLAKRQSLGSQILEPLQSFY 264
N ++ + E + + LE D+ P K + K SL IL F
Sbjct: 243 KGGLNIETKQHIIELLNKFKKLQGLEATDILYQPVIN--KAITKSTSL---ILP--HEFL 295
Query: 265 CPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSIEE 324
CPIT ++M+DPV ++ T+E+ +I+KW G+K CP T LD L PN LK I +
Sbjct: 296 CPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIMQ 355
Query: 325 WKDRNTIIKIGALKEKIQSGDDVLDDLGTLKELCEQKDQHREWVILENYIPVLIQILGSR 384
W ++N + EK S D EQKD+ + +L++ L S
Sbjct: 356 WCEKNNF----KIPEKEVSPDSQ----------NEQKDE----------VSLLVEALSSS 391
Query: 385 NREIRNLALAILYSLAKDNEEAKEKIAAVDNAIESIVPSLGR-RPGERKIAVTLLLELSK 443
E + ++ + LA++N E + IA AI +V L G ++ AVT LL LS
Sbjct: 392 QLEEQRRSVKQMRLLARENPENRVLIANA-GAIPLLVQLLSYPDSGIQENAVTTLLNLSI 450
Query: 444 CDLAREHIGKVQGCILLLVTMSSGDDNQAAKDATELLENLSYSDQNVIQMAKANYFKHLL 503
++ ++ I +G I ++ + + +A +++ L +LS D+N + + +N L+
Sbjct: 451 DEVNKKLISN-EGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLV 509
Query: 504 QRLSTGPDDVKMIMAKTLAEMELTDHNKELLFDCGVLTP 542
L G K L + L NK D G++ P
Sbjct: 510 DLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQP 548
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 154/358 (43%), Gaps = 58/358 (16%)
Query: 261 QSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQ 320
+ F CPI+ ++M DP S+ T+ERS I++W+ GN CP T L+ L PN L+
Sbjct: 245 EDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLRS 304
Query: 321 SIEEWKDRNTIIKIGALKEKIQSGDDVLDDLGTLKELCEQKDQHREWVILENYIPVLIQI 380
I +W ++ I + G D G+ ++L + I L+
Sbjct: 305 LISQWCTKHNIEQPGGYMNGRTKNSD-----GSFRDLSGDM----------SAIRALVCK 349
Query: 381 LGSRNREIRNLALAILYSLAKDNEEAKEKIAAVDNAIESIVPSLGRRPGERKIAVTLLLE 440
L S++ E R A++ + SL+K + DN I ++ G A+ +L++
Sbjct: 350 LSSQSIEDRRTAVSEIRSLSK---------RSTDNRI--LIAEAG--------AIPVLVK 390
Query: 441 LSKCDLAREHIGKVQGCILLLVTMSSGDDNQAAKDATELLENLSYSDQNVIQMAKANYFK 500
L ++S D + ++A + NLS + N + A
Sbjct: 391 L----------------------LTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVT 428
Query: 501 HLLQRLSTGPDDVKMIMAKTLAEMELTDHNKELLFDCGVLTPLLHLFSHNDLQVKTEATK 560
++ L G + + A TL + L D NK ++ G + L+ L + ++ K +A
Sbjct: 429 SIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAAT 488
Query: 561 ALRNLSSLKKNGLEMIRQGAGRPLLGLLFLHNMHTSSLWEDVAAIVMQLAASAISQDA 618
AL NL + N +R G +PL+ + L + + + ++ I+ LA++ +++ A
Sbjct: 489 ALFNLCIYQGNKGRAVRAGIVKPLVKM--LTDSSSERMADEALTILSVLASNQVAKTA 544
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 157/360 (43%), Gaps = 62/360 (17%)
Query: 261 QSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQ 320
+ F CPI+ ++M DP S+ T+ERS I++W+ GN CP T L+ L PN L+
Sbjct: 97 EDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLRS 156
Query: 321 SIEEWKDRNTIIKIGA-LKEKIQSGDDVLDDL-GTLKELCEQKDQHREWVILENYIPVLI 378
I +W ++ I + G + + ++ D DL G + + I L+
Sbjct: 157 LISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDM-----------------SAIRALV 199
Query: 379 QILGSRNREIRNLALAILYSLAKDNEEAKEKIAAVDNAIESIVPSLGRRPGERKIAVTLL 438
L S++ E R A++ + SL+K + DN I ++ G A+ +L
Sbjct: 200 CKLSSQSIEDRRTAVSEIRSLSK---------RSTDNRI--LIAEAG--------AIPVL 240
Query: 439 LELSKCDLAREHIGKVQGCILLLVTMSSGDDNQAAKDATELLENLSYSDQNVIQMAKANY 498
++L ++S D + ++A + NLS + N + A
Sbjct: 241 VKL----------------------LTSDGDTETQENAVTCILNLSIYEHNKELIMLAGA 278
Query: 499 FKHLLQRLSTGPDDVKMIMAKTLAEMELTDHNKELLFDCGVLTPLLHLFSHNDLQVKTEA 558
++ L G + + A TL + L D NK ++ G + L+ L + ++ K +A
Sbjct: 279 VTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDA 338
Query: 559 TKALRNLSSLKKNGLEMIRQGAGRPLLGLLFLHNMHTSSLWEDVAAIVMQLAASAISQDA 618
AL NL + N +R G +PL+ + L + + + ++ I+ LA++ +++ A
Sbjct: 339 ATALFNLCIYQGNKGRAVRAGIVKPLVKM--LTDSSSERMADEALTILSVLASNQVAKTA 396
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 150/360 (41%), Gaps = 41/360 (11%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSI 322
F C ++ ++M DPV +S TFER I+KW+ G +CP T L + L PN ++ +
Sbjct: 244 FRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVRAFL 303
Query: 323 EEWKDRNTIIKIGALKEKIQSGDDVLDDLGTLKELCEQKDQHREWVILENYIPVLIQILG 382
W + N + L E I S + + +++ ++ H E + E L Q+
Sbjct: 304 ASWCETNNVYPPDPL-ELIHSSEPFPLLVESVRA-SSSENGHSESLDAEE----LRQVF- 356
Query: 383 SRNREIRNLALAILYSLAKDNEEAKEKIAAVDNAI-----------ESIVPSLGRRPGER 431
SR+ + ++ ++N A ++ N I+P+ R G
Sbjct: 357 SRSASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHPGIIPATVRETGSS 416
Query: 432 KIAVTLLLEL------SKCDLAREHIGKVQ----------------GCILLLVTMSSGDD 469
T + +L S D RE +++ I LV++ D
Sbjct: 417 SSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTD 476
Query: 470 NQAAKDATELLENLSYSDQNVIQMAKANYFKHLLQRLSTGP-DDVKMIMAKTLAEMELTD 528
+ DA L NLS +D N +A++ L+ L TG ++ K A TL + + +
Sbjct: 477 ERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIE 536
Query: 529 HNKELLFDCGVLTPLLHLFSHNDLQVKTEATKALRNLSSLKKNGLEMIRQGAGRPLLGLL 588
K + + G + PL+ L L K +A AL NLS +N ++I GA R L+ L+
Sbjct: 537 EYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELM 596
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 146/361 (40%), Gaps = 72/361 (19%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSI 322
F CP++ ++M DPV ++ T+ER+ I++W+ GN CP T L+ L PN L+ I
Sbjct: 245 FLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVLRSLI 304
Query: 323 EEW-KDRNTIIKIGALKEKIQSGDDVLDDLGTLKELCEQKDQHREWVILENYIPVLIQIL 381
W + N G + + ++ D+ + I L+Q L
Sbjct: 305 SRWCAEHNIEQPAGYINGRTKNSGDM------------------------SVIRALVQRL 340
Query: 382 GSRNREIRNLALAILYSLAKDNEEAKEKIAAVDNAIESIVPSLGRRPGERKIAVTLLLEL 441
SR+ E R A++ + SL+K + DN I L+ E
Sbjct: 341 SSRSTEDRRNAVSEIRSLSK---------RSTDNRI-------------------LIAE- 371
Query: 442 SKCDLAREHIGKVQGCILLLVTMSSGDDNQAAKDATELLENLSYSDQNVIQMAKANYFKH 501
G I +LV + + +D ++A + NLS + N + A
Sbjct: 372 -------------AGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGAVTS 418
Query: 502 LLQRLSTGPDDVKMIMAKTLAEMELTDHNKELLFDCGVLTPLLHLFSHNDLQVKTEATKA 561
++Q L G + + A TL + L D NK ++ G + L+ L + + K +A A
Sbjct: 419 IVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPRGKKDAATA 478
Query: 562 LRNLSSLKKNGLEMIRQGAGRPLLGLLFLHNMHTSSLWEDVAAIVMQLAASAISQDAQAP 621
L NL N +R G L+ +L H D A ++ + A+ +QDA++
Sbjct: 479 LFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHR---MVDEALTILSVLAN--NQDAKSA 533
Query: 622 V 622
+
Sbjct: 534 I 534
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 118/274 (43%), Gaps = 30/274 (10%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSI 322
F CPI+ ++M DPV SS T+ER+ IEKW+ G+ CP T L + L PN L+ I
Sbjct: 260 FRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLRSLI 319
Query: 323 EEWKDRNTI-----------------------IKIGALKEKIQSGD--DVLDDLGTLKEL 357
+W + N I KI L ++ G+ D G ++ L
Sbjct: 320 AQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGEIRLL 379
Query: 358 CEQKDQHREWVILENYIPVLIQILGSRNREIRNLALAILYSLAKDNEEAKEKIAAVDNAI 417
++ +R + IP+L+ +L + + I+ ++ L +L+ ++A AI
Sbjct: 380 AKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSA--GAI 437
Query: 418 ESIVPSLGRRPGE-RKIAVTLLLELSKCDLAREHIGKVQGCILLLVTMSSGDDNQAAKDA 476
IV L + E R+ A L LS D + IG + G I LV + + + KDA
Sbjct: 438 PGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGAL-GAIPPLVVLLNEGTQRGKKDA 496
Query: 477 TELLENLSYSDQNVIQMAKANYFKHLLQRLSTGP 510
L NL N + +A L RL T P
Sbjct: 497 ATALFNLCIYQGNKGKAIRAGVIP-TLTRLLTEP 529
>AT1G49780.1 | Symbols: PUB26 | plant U-box 26 |
chr1:18429024-18430289 REVERSE LENGTH=421
Length = 421
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
Query: 257 LEPLQ-------SFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDI 309
LEPL F CPI+ D+M DPV S+ T++R++I+ W+A GN CP+T + L
Sbjct: 5 LEPLDLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSD 64
Query: 310 SILRPNKTLKQSIEEW 325
L PN TL++ I+EW
Sbjct: 65 FTLIPNHTLRRLIQEW 80
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
chr1:10264412-10266601 FORWARD LENGTH=729
Length = 729
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 131/307 (42%), Gaps = 39/307 (12%)
Query: 234 VASSPRERQLKHLAKRQSLGSQILEPLQSFYCPITHDVMVDPVETSSAHTFERSAIEKWV 293
+ ++P++ + +A Q +G + + F CPI+ D+M DPV S+ T++R++I +W+
Sbjct: 282 IENNPKKPRKGFVA--QEIGDTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWI 339
Query: 294 AEGNKLCPLTLIPLDISILRPNKTLKQSIEEW---------------------------- 325
EG+ CP T L S + PN+ LK I +W
Sbjct: 340 EEGHCTCPKTGQMLMDSRIVPNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKA 399
Query: 326 ---KDRNTI-IKIGALKEKIQSGDDVLDDLGTLKELCEQKDQHREWVILENYIPVLIQIL 381
++ T+ I I L + Q+ V ++ L + ++R ++ IP L ++L
Sbjct: 400 AVEANKATVSILIKYLADGSQAAQTVAAR--EIRLLAKTGKENRAYIAEAGAIPHLCRLL 457
Query: 382 GSRNREIRNLALAILYSLAKDNEEAKEKIAAVDNAIESIVPSL--GRRPGERKIAVTLLL 439
S N + ++ + +L+ E+ K +I + +ESIV L G ++ A L
Sbjct: 458 TSENAIAQENSVTAMLNLSI-YEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLF 516
Query: 440 ELSKCDLAREHIGKVQGCILLLVTMSSGDDNQAAKDATELLENLSYSDQNVIQMAKANYF 499
LS ++ I V C+ L + + KDA L NLS N +M +
Sbjct: 517 SLSAVHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGV 576
Query: 500 KHLLQRL 506
L+ L
Sbjct: 577 SSLVGAL 583
>AT1G60190.1 | Symbols: | ARM repeat superfamily protein |
chr1:22198403-22200463 FORWARD LENGTH=686
Length = 686
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 28/238 (11%)
Query: 265 CPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSIEE 324
CPI+ ++M DPV S HT++RS+I KW A GN CP T L ++L N ++KQ I+
Sbjct: 284 CPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQS 343
Query: 325 WKDRNTII------------------KIGALKEKIQSGDDVLDD-------LGTLKELCE 359
+ +N ++ + G L + +G+ + D L ++ L +
Sbjct: 344 YSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEEMVKALVEIRILTK 403
Query: 360 QKDQHREWVILENYIPVLIQILGSRNREIRNLALAILYSLAKDNEEAKEKIAAVDNAIES 419
+R ++ + L++IL S + I+ A+A + +L+KD + +
Sbjct: 404 TSTFYRSCLVEAGVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIVGEDGGGLRL 463
Query: 420 IVPSL--GRRPGERKIAVTLLLELSKCDLAREHIGKVQGCILLLV-TMSSGDDNQAAK 474
IV L G R R+ A L LS IG++ I LV + S D +AK
Sbjct: 464 IVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYGDSAK 521
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2354884-2356613 FORWARD LENGTH=460
Length = 460
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 157/383 (40%), Gaps = 62/383 (16%)
Query: 233 DVASSPRERQLKHLAKRQSLGSQILEPL---QSFYCPITHDVMVDPVETSSAHTFERSAI 289
D S+ RE ++ +AK SL ++LE + + F CP+++++M DPV +S T+++ I
Sbjct: 47 DALSALREATMRKMAKSSSL--EMLETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFI 104
Query: 290 EKWVAEGNKLCPLTLIPLDISILRPNKTLKQSIEEWKDRNTIIKIGALKEKIQSGDDVLD 349
+KW++ GN+ CP T L + L PN +++ I +W +N +
Sbjct: 105 QKWLSSGNRTCPKTQQVLPHTALTPNLLIREMISKWCKKNGL------------------ 146
Query: 350 DLGTLKELCEQKDQHREWVILENYIPVLIQILGSRNREIRN-LALAILYSLAKDNEEAKE 408
E K Q+ ++ E+ + + +REI N L + S +D + A +
Sbjct: 147 ---------ETKSQYHPNLVNED------ETVTRSDREIFNSLLCKVSSSNLQDQKSAAK 191
Query: 409 KIAAVDNAIESIVPSLGRRPGERKIAVTLLLELSKCDLAREHIGKVQGCILLLVTMSSGD 468
++ + G P E V LL S D + + + L+ +S D
Sbjct: 192 ELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQ-----EDVVTTLLNISIHD 246
Query: 469 DNQAAKDATELLENLSYSDQNVIQMAKANYFKHLLQRLSTGPDDVKMIMAKTLAEMELTD 528
D+ + L + NVI + L+ L G + A + + D
Sbjct: 247 DSN---------KKLVCENPNVIPL--------LIDALRRGTVATRSNAAAAIFTLSALD 289
Query: 529 HNKELLFDCGVLTPLLHLFSHNDLQVKTEATKALRNLSSLKKNGLEMIRQGAGRPLLGLL 588
NK L+ G+L PL+ L + + A+ L +N +R GA R +LG
Sbjct: 290 SNKVLIGKSGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVR-VLGKK 348
Query: 589 FLHNMHTSSLWEDVAAIVMQLAA 611
+ ++ L +A +V A
Sbjct: 349 ISNGLYVDELLAILAMLVTHWKA 371
>AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 |
chr4:11356143-11357267 REVERSE LENGTH=374
Length = 374
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 22/246 (8%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPL-DISILRPNKTLKQS 321
F CPI+ ++M DPV S HTF+R +I++W+ GN+ CP+T +PL + L PN L+
Sbjct: 9 FRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHALRSL 68
Query: 322 I-----------------EEWKDRNTIIKIGALKEKIQSGDDVLDDLGTLKELCEQKDQH 364
I +E + I L + S L+ L L L ++
Sbjct: 69 ILNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRLTKRDSSI 128
Query: 365 REWVILENYIPVLIQILGSRNREIRNLALAILYSLAKDNEEAKEKIAAVDNAIESIVPSL 424
R V + + + S N+ ++ +L++L +L+ +++ +A D I IV L
Sbjct: 129 RRKVTESGAVRAALDCVDSCNQVLQEKSLSLLLNLSLEDDNKVGLVA--DGVIRRIVTVL 186
Query: 425 G-RRPGERKIAVTLLLELSKCDLAREHIGKVQGCILLLVT-MSSGDDNQAAKDATELLEN 482
P + IA TLL L+ ++ + IG I LV+ + G+D + + AT L
Sbjct: 187 RVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDRERKESATALYAL 246
Query: 483 LSYSDQ 488
S+ D
Sbjct: 247 CSFPDN 252
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 166/416 (39%), Gaps = 79/416 (18%)
Query: 251 SLGSQILEPLQS------FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTL 304
S GS+I+ +S F CPI+ ++M DPV S+ T+ERS+I+KW+ G+K CP +
Sbjct: 234 STGSRIVSRHRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQ 293
Query: 305 IPLDISILRPNKTLKQSIEEWKDRNTI---IKIGALKEKIQSGDDVLDDLGTLKELCEQK 361
L + L PN LK I W + N I G+ + G D C++
Sbjct: 294 ETLLHAGLTPNYVLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSD--------CDR- 344
Query: 362 DQHREWVILENYIPVLIQILGSRNREIRNLALAILYSLAKDNEEAKEKIAAVDNAIESIV 421
++ L++ L + E + A L LAK N VDN + +
Sbjct: 345 ----------TFVLSLLEKLANGTTEQQRAAAGELRLLAKRN---------VDNRV--CI 383
Query: 422 PSLGRRPGERKIAVTLLLELSKCDLAREHIGKVQGCILLLVTMSSGDDNQAAKDATELLE 481
G A+ LL+EL +SS D T LL
Sbjct: 384 AEAG--------AIPLLVEL----------------------LSSPDPRTQEHSVTALL- 412
Query: 482 NLSYSDQNVIQMAKANYFKHLLQRLSTGPDDVKMIMAKTLAEMELTDHNKELLFDCGVLT 541
NLS ++ N + A +++ L G + + A TL + + D NK + G +
Sbjct: 413 NLSINEGNKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQ 472
Query: 542 PLLHLFSHNDLQVKTEATKALRNLSSLKKNGLEMIRQGAGRPLLGLLFLHNMHTSSLWED 601
L+ L + K +A A+ NL + N ++ G PL LL + ++
Sbjct: 473 ALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLL---KDAGGGMVDE 529
Query: 602 VAAIVMQLAASAISQDAQAPVSLLESDEDVFNLFCLIRVTLPEVQQKIILTFYILC 657
AI LA + +Q+ + ++ ES + L +IR P ++ + LC
Sbjct: 530 ALAI---LAILSTNQEGKTAIAEAES---IPVLVEIIRTGSPRNRENAAAILWYLC 579
>AT5G51270.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:20835137-20838262 REVERSE
LENGTH=819
Length = 819
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 14/109 (12%)
Query: 223 DQIIALLERADVASSPRERQLKHLAK--RQSLGSQILEPLQSFYCPITHDVMVDPVETSS 280
DQI+ +LE LK +A R SL + +P F+CP+ DVM +P +
Sbjct: 722 DQILPVLE-----------SLKKVADKARNSLSAAPSQPPSHFFCPLLKDVMKEPCIAAD 770
Query: 281 AHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSIEEWKDRN 329
+T++R AIE+W+ E ++ P+T PL L PN TL +I EW++RN
Sbjct: 771 GYTYDRRAIEEWM-ENHRTSPVTNSPLQNVNLLPNHTLYAAIVEWRNRN 818
>AT4G36550.1 | Symbols: | ARM repeat superfamily protein |
chr4:17245400-17247926 REVERSE LENGTH=718
Length = 718
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 41/69 (59%)
Query: 261 QSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQ 320
+ F C ++ VM DPV SS +TFER I+KW EGN CP++ LD L+PN LK
Sbjct: 221 EKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELKS 280
Query: 321 SIEEWKDRN 329
I EW +N
Sbjct: 281 QISEWCAKN 289
>AT3G19380.1 | Symbols: PUB25 | plant U-box 25 |
chr3:6714602-6715867 REVERSE LENGTH=421
Length = 421
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 252 LGSQILEPLQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNK-LCPLTLIPLDIS 310
LG QI P F CPI+ ++M DPV + T++R++IE WV+ GN CP+T PL
Sbjct: 10 LGIQI--PYH-FRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDF 66
Query: 311 ILRPNKTLKQSIEEW 325
L PN TL++ I+EW
Sbjct: 67 TLIPNHTLRRLIQEW 81
>AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |
chr1:20960356-20962334 REVERSE LENGTH=485
Length = 485
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 232 ADVASSPRERQLKHLAKRQSLGSQILEPLQSFYCPITHDVMVDPVETSSAHTFERSAIEK 291
AD R++ LK AK Q Q P SF+CPIT +VM DP + T+E +I K
Sbjct: 395 ADAMREERDKALK-TAKEQMEKRQ---PPSSFFCPITQEVMKDPHFAADGFTYEAESIRK 450
Query: 292 WVAEGNKLCPLTLIPLDISILRPNKTLKQSIEE 324
W++ G++ P+T + L L PN+ L+ +IEE
Sbjct: 451 WLSTGHQTSPMTNLRLSHLTLVPNRALRSAIEE 483
>AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 |
chr3:6434234-6435481 REVERSE LENGTH=415
Length = 415
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 29/196 (14%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSI 322
F CPI+ DVM PV + T++R++I++W+ GN CP T+ L PN TL++ I
Sbjct: 16 FKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQRLI 75
Query: 323 EEWKD------------------RNTIIK--IGALKEKIQSGDDVLDDLGTLKELCEQKD 362
W D R K + L E++ S L++L + + D
Sbjct: 76 NIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMS----LENLMKIVRFVKDSD 131
Query: 363 QHREWVILE-NYIPVLIQILGSRNREIR--NLALAILYSLAKDNEEAKEKIAAVD--NAI 417
+RE++ + ++P+L+ I+ ++ +I +A+ IL S+ D E + A D + +
Sbjct: 132 SNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSIKVDRERLSNLMLANDGGDCL 191
Query: 418 ESIVPSLGRRPGERKI 433
+I+ ++ R E KI
Sbjct: 192 TAILLAIQRGNLESKI 207
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 260 LQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLK 319
L F+CP++ +VM DPV SS T+E++ I++W+ G K+CP T L + L PN T+K
Sbjct: 234 LADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVK 293
Query: 320 QSIEEWKDRNTI 331
I W + N +
Sbjct: 294 ALIANWCETNDV 305
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 456 GCILLLVTMSSGDDNQAAKDATELLENLSYSDQNVIQMAKANYFKHLLQRLSTGPDDVKM 515
G I+LLV + D+ ++A L NLS +D N +A A + L+ L G + K
Sbjct: 586 GAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKE 645
Query: 516 IMAKTLAEMELTDHNKELLFDCGVLTPLLHLFSHNDLQVKTEATKALRNLSSLKKNGLEM 575
A TL + + + NK + G + PL+ L + + K +A AL NLS ++N +
Sbjct: 646 NSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMI 705
Query: 576 IRQGAGRPLLGLLFLHNMHTSSLWEDVAAIVMQLAA-----SAISQDAQAPV 622
++ GA R L+ L+ + + + A++ LA +AI Q+ P+
Sbjct: 706 VQSGAVRYLIDLM----DPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPL 753
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 260 LQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLK 319
L F+CP++ +VM DPV SS T+E++ I++W+ G K+CP T L + L PN T+K
Sbjct: 231 LADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVK 290
Query: 320 QSIEEWKDRNTI 331
I W + N +
Sbjct: 291 ALIANWCETNDV 302
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 456 GCILLLVTMSSGDDNQAAKDATELLENLSYSDQNVIQMAKANYFKHLLQRLSTGPDDVKM 515
G I+LLV + D+ ++A L NLS +D N +A A + L+ L G + K
Sbjct: 583 GAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKE 642
Query: 516 IMAKTLAEMELTDHNKELLFDCGVLTPLLHLFSHNDLQVKTEATKALRNLSSLKKNGLEM 575
A TL + + + NK + G + PL+ L + + K +A AL NLS ++N +
Sbjct: 643 NSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMI 702
Query: 576 IRQGAGRPLLGLLFLHNMHTSSLWEDVAAIVMQLAA-----SAISQDAQAPV 622
++ GA R L+ L+ + + + A++ LA +AI Q+ P+
Sbjct: 703 VQSGAVRYLIDLM----DPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPL 750
>AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY
protein 2 | chr5:25842119-25843381 REVERSE LENGTH=420
Length = 420
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSI 322
F CPI+ DVM PV + T++R++I++W+ GN CP T+ L PN+TL++ I
Sbjct: 14 FRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQRLI 73
Query: 323 EEWKD---RNTIIKIGALKEKIQSGDDVLDDLGTLKELCEQKDQH 364
E W D R T ++ L + D++ D + +K E++D
Sbjct: 74 EIWSDSVRRRTCVESAELAAPTR--DEIADAIDRVKIEKEERDDR 116
>AT3G61390.2 | Symbols: | RING/U-box superfamily protein |
chr3:22716418-22718270 FORWARD LENGTH=435
Length = 435
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 258 EPLQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKT 317
EP Q F CPITHD+M DP + T+E AI +W G++ P+ L + L PN
Sbjct: 352 EPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLA 411
Query: 318 LKQSIEEW 325
L+ +I+EW
Sbjct: 412 LRSAIQEW 419
>AT5G61560.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=796
Length = 796
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSI 322
FYCPIT DVM +P S +T+E+ AI++W+ + +K P+T +P L PN +L +I
Sbjct: 729 FYCPITKDVMENPCVASDGYTYEKRAIKEWLQKNHK-SPMTDLPFPSDSLLPNHSLLSAI 787
Query: 323 EEWKDRNTIIK 333
+EW R+ +IK
Sbjct: 788 KEW--RSQLIK 796
>AT5G61560.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=794
Length = 794
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSI 322
FYCPIT DVM +P S +T+E+ AI++W+ + +K P+T +P L PN +L +I
Sbjct: 727 FYCPITKDVMENPCVASDGYTYEKRAIKEWLQKNHK-SPMTDLPFPSDSLLPNHSLLSAI 785
Query: 323 EEWKDRNTIIK 333
+EW R+ +IK
Sbjct: 786 KEW--RSQLIK 794
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 253 GSQILEPLQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISIL 312
SQ+ P + CPI+ +M DPV +S T+ER IEKW ++G+ CP T L L
Sbjct: 273 SSQMSVPPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCL 332
Query: 313 RPNKTLKQSIEEWKDRNTI 331
PN +K I W ++N +
Sbjct: 333 TPNYCVKALISSWCEQNGV 351
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 |
chr1:3484613-3486706 FORWARD LENGTH=697
Length = 697
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 260 LQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLK 319
++ CPI+ ++M DPV + HT++RS+I KW GN CP+T L + L N +++
Sbjct: 289 VEDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVR 348
Query: 320 QSIEEWKDRNTIIKIGALKEKIQSGDDVL 348
Q I + N I+ + + + +S DDV+
Sbjct: 349 QVIRKHCKTNGIV-LAGISRRRKSHDDVV 376
>AT5G09800.1 | Symbols: | ARM repeat superfamily protein |
chr5:3043123-3044352 REVERSE LENGTH=409
Length = 409
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSI 322
F CPI+ DVM PV S+ T++R +I++W+ +GN CP T+ L PN TL + I
Sbjct: 15 FKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLHRLI 74
Query: 323 EEWKD 327
+ W D
Sbjct: 75 DHWSD 79
>AT5G57035.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:23080743-23083819 FORWARD
LENGTH=789
Length = 789
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSI 322
+YCPI ++M DP + T+ER AI++W+ + + P+T L S L PN TL+ +I
Sbjct: 712 YYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNHTLRSAI 771
Query: 323 EEWKDRNTI 331
EW+ R+ +
Sbjct: 772 REWRSRSRL 780
>AT5G01830.1 | Symbols: | ARM repeat superfamily protein |
chr5:320983-323007 FORWARD LENGTH=674
Length = 674
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 33/263 (12%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSI 322
F CPIT ++M DPV ++ T++R +I+ W+ G+ CP T L + L PN+ LK I
Sbjct: 278 FRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRALKNLI 337
Query: 323 EEW-KDRN----------------------TIIKIGALKEKIQSGDDVLDDLGT---LKE 356
W +D+ T + + L EK+ V D G L+
Sbjct: 338 VLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLS----VADSNGVVFELRA 393
Query: 357 LCEQKDQHREWVILENYIPVLIQILGSRNREIRNLALAILYSLAKDNEEAKEKIAAVDNA 416
L + R + IP L++ L + ++ A+ + +L+ E+ K +I D A
Sbjct: 394 LAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTILNLSI-LEQNKTRIMETDGA 452
Query: 417 IESIVPSL--GRRPGERKIAVTLLLELSKCDLAREHIGKVQGCILLLVTMSSGDDNQAAK 474
+ ++ L G + A L L+ R +G+ + LV ++ + +
Sbjct: 453 LNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSKR 512
Query: 475 DATELLENLSYSDQNVIQMAKAN 497
DA + NL +NV + +A
Sbjct: 513 DALVAILNLVAERENVGRFVEAG 535
>AT4G25160.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr4:12903360-12906669 REVERSE
LENGTH=835
Length = 835
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 223 DQIIALLERADVASSPRERQLKHLAK--RQSLGSQILEPLQSFYCPITHDVMVDPVETSS 280
DQI+ LE LK +A+ R S +P F CP+ DVM +P +
Sbjct: 739 DQILPALE-----------NLKKVAEKARNSFSGVSTQPPTHFICPLLKDVMNEPCVAAD 787
Query: 281 AHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSIEEWK 326
+T++R AIE+W+ E N P+T PL L PN TL +I EW+
Sbjct: 788 GYTYDRHAIEEWLKEHN-TSPMTDSPLHSKNLLPNYTLYTAIMEWR 832
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSI 322
F CP++ ++M+DPV +S TF+R++I+KW+ G +CP T L L PN T+K I
Sbjct: 206 FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTVKAMI 265
Query: 323 EEWKDRNTI 331
W + N I
Sbjct: 266 ASWLEANRI 274
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSI 322
F CP++ ++M+DPV +S TF+R++I+KW+ G +CP T L L PN T+K I
Sbjct: 242 FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTVKAMI 301
Query: 323 EEWKDRNTI 331
W + N I
Sbjct: 302 ASWLEANRI 310
>AT1G24330.1 | Symbols: | ARM repeat superfamily protein |
chr1:8631779-8634835 FORWARD LENGTH=771
Length = 771
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 130/346 (37%), Gaps = 82/346 (23%)
Query: 244 KHLAKRQSLGSQILEPLQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLT 303
K + R+S Q+ P + CPI+ +M DPV +S T+ER IEKW ++G+ CP T
Sbjct: 262 KPMNSRKS--GQMPIPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKT 319
Query: 304 LIPLDISILRPNKTLKQSIEEWKDRNTIIKIGALKEKI-----------------QSGDD 346
L L PN +K I W ++N I E + +S D
Sbjct: 320 QQQLPHLSLTPNYCVKGLIASWCEQNGITVPTGPPESLDLNYWRLAMSDSESPNSKSVDS 379
Query: 347 V------------LDDLGTLKELCEQKDQHR-------EWVILENYIPVL---------- 377
V L++ T++ +QK+++ E +LE Y +L
Sbjct: 380 VGLCTPKDIRVVPLEESSTIESERQQKEKNNAPDEVDSEINVLEGYQDILAIVDKEEDLA 439
Query: 378 --------IQILGSRNREIRNLA---------LAILYSLAKDNEEAKEKIAAV------- 413
++IL N E R L L L S DN A ++ A+
Sbjct: 440 KKCKVVENVRILLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAV 499
Query: 414 -DNAIESIVPSLGRRPGERKI---------AVTLLLELSKCDLAREHIGKVQGCILLLVT 463
+N + ++ + G P K+ A L L LS + A+ IG Q +
Sbjct: 500 NNNRNKELMLTSGVIPLLEKMISCSQSQGPATALYLNLSCLEKAKPVIGSSQAVSFFVNL 559
Query: 464 MSSGDDNQAAKDATELLENLSYSDQNVIQMAKANYFKHLLQRLSTG 509
+ Q DA L NLS N+ + +N K L STG
Sbjct: 560 LLQDTKTQCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTG 605
>AT5G37490.1 | Symbols: | ARM repeat superfamily protein |
chr5:14887744-14889051 FORWARD LENGTH=435
Length = 435
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSI 322
F CPI+ D+M DPV S+ T++R +IE W+ GNK CP+T L PN T+++ I
Sbjct: 35 FQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNHTIRKMI 94
Query: 323 EEW 325
+ W
Sbjct: 95 QGW 97
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 255 QILEPLQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRP 314
Q+ P + CPI+ +M DPV +S T+ER IEKW ++G+ CP T L L P
Sbjct: 268 QMPVPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTP 327
Query: 315 NKTLKQSIEEWKDRN 329
N +K I W ++N
Sbjct: 328 NNCVKGLIASWCEQN 342
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 255 QILEPLQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRP 314
Q+ P + CPI+ +M DPV +S T+ER IEKW ++G+ CP T L L P
Sbjct: 268 QMPVPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTP 327
Query: 315 NKTLKQSIEEWKDRN 329
N +K I W ++N
Sbjct: 328 NNCVKGLIASWCEQN 342
>AT3G49810.1 | Symbols: | ARM repeat superfamily protein |
chr3:18474936-18476282 REVERSE LENGTH=448
Length = 448
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSI 322
F CPI+ + M DPV + T+ER I KW G+ CP T+ L + PNKTL I
Sbjct: 68 FICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLHHLI 127
Query: 323 EEWKDRNTIIKIGALKEKIQSGDDVLDDLGTLKELCEQKDQH---------------REW 367
W + ++ + E +Q ++ LGTLK+ Q H R+
Sbjct: 128 YTWFSQKYVL-MKKRSEDVQG--RAIEILGTLKKAKGQARVHALSELKQIVIAHLMARKT 184
Query: 368 VILENYIPVLIQILGS-RNREIRNLALAILYSLAKDNE 404
V+ E + V+ +LG + + + +AIL SL D++
Sbjct: 185 VVEEGGVSVISSLLGPFTSHAVGSEVVAILVSLDLDSD 222
>AT3G52450.1 | Symbols: PUB22 | plant U-box 22 |
chr3:19440943-19442250 REVERSE LENGTH=435
Length = 435
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNK-LCPLTLIPLDISILRPNKTLKQS 321
F CPI+ D+M DPV S+ T++R +IEKW+ G K CP+T + + L PN TL++
Sbjct: 11 FLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHTLRRL 70
Query: 322 IEEW 325
I+ W
Sbjct: 71 IQSW 74
>AT5G65920.1 | Symbols: | ARM repeat superfamily protein |
chr5:26364323-26365657 REVERSE LENGTH=444
Length = 444
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSI 322
F CPI+ + M DPV + T+ERS I KW G+ CP T+ L ++ PNKTL Q I
Sbjct: 64 FICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTLHQLI 123
Query: 323 EEWKDRNTIIKIGALKEKIQSGDDVLDDLGTLKE 356
W + ++ + E +Q ++ LGTL++
Sbjct: 124 YTWFSQKYVL-MKKRSEDVQG--RAIEILGTLRK 154
>AT1G01660.1 | Symbols: | RING/U-box superfamily protein |
chr1:240057-242608 REVERSE LENGTH=568
Length = 568
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 258 EPLQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKT 317
+P F CPI+ +VM +P + T+E ++ +W+ G++ P+T + L + L PN
Sbjct: 496 QPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHA 555
Query: 318 LKQSIEEWKDRNT 330
L+ +I+EW RN+
Sbjct: 556 LRSAIQEWLQRNS 568
>AT2G35930.1 | Symbols: PUB23 | plant U-box 23 |
chr2:15083101-15084336 REVERSE LENGTH=411
Length = 411
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNK-LCPLTLIPLDISILRPNKTLKQS 321
F CPI+ ++M DPV S+ T++R +IEKW+ G K CP+T + + L PN TL++
Sbjct: 16 FLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNHTLRRL 75
Query: 322 IEEW 325
I+ W
Sbjct: 76 IQSW 79
>AT5G65500.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:26181093-26183997 REVERSE
LENGTH=791
Length = 791
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSI 322
F CPI +VM +P + ++E AI++W++ G+ P+T + LD +L PN TL+ I
Sbjct: 719 FMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQMLTPNHTLRSLI 778
Query: 323 EEWKDR 328
++W +
Sbjct: 779 QDWHSK 784
>AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 |
chr1:246411-248329 REVERSE LENGTH=308
Length = 308
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%)
Query: 237 SPRERQLKHLAKRQSLGSQILEPLQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEG 296
SP++ + + + K +S S L+ F CPI+ ++M DP + T+E KW+ G
Sbjct: 211 SPKKGRKETIEKSKSNESDEDPRLEDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSG 270
Query: 297 NKLCPLTLIPLDISILRPNKTLKQSIEEWKDRNTIIK 333
+ P T PL+ L PN TL+ I++W ++N K
Sbjct: 271 GRTSPKTNKPLENHNLVPNHTLRIIIKDWLEKNPNYK 307
>AT1G01670.1 | Symbols: | RING/U-box superfamily protein |
chr1:242943-245163 REVERSE LENGTH=365
Length = 365
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 211 RVEKELFEARQMDQIIALLERA-DVASSPRERQLKHLAKRQS----LGSQILEPLQSFYC 265
RV+ EL E D LLE+ D A E L+ L K +S S +EP Q F C
Sbjct: 243 RVQIELKEQHYAD--CRLLEKERDEAIKTTEELLRALEKGESSIPLQWSVSIEPPQCFIC 300
Query: 266 PITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSIEEW 325
PI+ D+M +P + +T+E +W+ G + P+T + L+ L PN L+ +I++W
Sbjct: 301 PISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIPNLVLRSAIKDW 360
>AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=431
Length = 431
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSI 322
F CPI++++M DPV +S T++R IEKW G + CP+T L PN T+++ I
Sbjct: 37 FQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNHTIRRMI 96
Query: 323 EEW 325
+ W
Sbjct: 97 QGW 99
>AT2G45920.1 | Symbols: | U-box domain-containing protein |
chr2:18899363-18901097 FORWARD LENGTH=400
Length = 400
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 242 QLKHLAKRQSLGSQILEPLQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCP 301
+++ L K S + E Q F CPI+ +VM DP + T+E AI W+ G++ P
Sbjct: 308 EVEELRKEVSRSDEHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSP 367
Query: 302 LTLIPLDISILRPNKTLKQSIEEW 325
+T L + L PN L+ +I+EW
Sbjct: 368 MTNTKLHHTKLVPNLALRSAIQEW 391
>AT2G19410.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:8404901-8409012 REVERSE LENGTH=801
Length = 801
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 247 AKRQSLGSQILEPLQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIP 306
+K + GS + P ++CPI ++M +P + T+ER AI W+ + N + P+T
Sbjct: 714 SKVKKEGSNLRAP-SHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHN-ISPVTRQK 771
Query: 307 LDISILRPNKTLKQSIEEWKDR 328
LD L PN TL+ +I +WK R
Sbjct: 772 LDHFKLTPNHTLRSAIRDWKSR 793
>AT3G49060.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187054-18191878 REVERSE
LENGTH=795
Length = 795
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 259 PLQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTL 318
P + CPI +VM DP+ + T+E AI +W+A G+ P+T + ++ L PN L
Sbjct: 725 PPSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHAL 784
Query: 319 KQSIEEWKDR 328
+I++W+++
Sbjct: 785 HLAIQDWQNQ 794
>AT4G16490.1 | Symbols: | ARM repeat superfamily protein |
chr4:9293891-9295530 REVERSE LENGTH=472
Length = 472
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 114/260 (43%), Gaps = 25/260 (9%)
Query: 456 GCILLLVTMSSGDDNQAAKDATELLENLSYSDQNVIQMAKANYFKHLLQRLSTGPDDVKM 515
G I L+ + +D + A L NLS DQN +A K L+ L TG + K
Sbjct: 225 GAIQALIPLLRCNDPWTQEHAVTALLNLSLHDQNKAVIAAGGAIKSLVWVLKTGTETSKQ 284
Query: 516 IMAKTLAEMELTDHNKELLFDCGVLTPLLHLFSHNDLQVKTEATKALRNLSSLKKNGLEM 575
A L + L + NK + CG + PL+ L + + K +A L L +L++N
Sbjct: 285 NAACALLSLALLEENKGSIGACGAIPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERA 344
Query: 576 IRQGAGRPLLGLLFLHNMHTSSLWEDVAAIVMQLAASAISQDA----QAPVSLLESDEDV 631
+ GA +PL+ L+ + + E ++ LAA ++A +L+E+ ED
Sbjct: 345 VTAGAVKPLVDLVAEEG---TGMAEKAMVVLSSLAAIDDGKEAIVEEGGIAALVEAIED- 400
Query: 632 FNLFCLIRVTLPEVQQK--IILTFYILCQSPLASYIRTKLNECPAIPDLVRLWENENLNL 689
V+ K ILT LC + + R L AIP LV L ++ ++++
Sbjct: 401 -----------GSVKGKEFAILTLLQLCSDSVRN--RGLLVREGAIPPLVGLSQSGSVSV 447
Query: 690 RA--SAVKLLSCLVESCDEA 707
RA A +LL L E EA
Sbjct: 448 RAKRKAERLLGYLREPRKEA 467
>AT3G49060.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187386-18191878 REVERSE
LENGTH=805
Length = 805
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 259 PLQSFYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTL 318
P + CPI +VM DP+ + T+E AI +W+A G+ P+T + ++ L PN L
Sbjct: 735 PPSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHAL 794
Query: 319 KQSIEEWKDR 328
+I++W+++
Sbjct: 795 HLAIQDWQNQ 804
>AT3G01400.1 | Symbols: | ARM repeat superfamily protein |
chr3:151920-152987 FORWARD LENGTH=355
Length = 355
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 456 GCILLLVTMSSGDDNQAAKDATELLENLSYSDQNVIQMAKANYFKHLLQRLSTGPDDVKM 515
G I L+++ S D Q + + NLS D+N +A + K L++ L G K
Sbjct: 105 GAIKPLISLISSSDLQLQEYGVTAILNLSLCDENKESIASSGAIKPLVRALKMGTPTAKE 164
Query: 516 IMAKTLAEMELTDHNKELLFDCGVLTPLLHLFSHNDLQVKTEATKALRNLSSLKKNGLEM 575
A L + + NK + G + L++L + K +A+ AL +L S K+N +
Sbjct: 165 NAACALLRLSQIEENKVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRA 224
Query: 576 IRQGAGRPLLGLL--FLHNMHTSSLWEDVAAIVMQLAAS--AISQDAQAPVSLLESDEDV 631
++ G +PL+ L+ F NM S + V +++M + S AI ++ PV
Sbjct: 225 VQSGIMKPLVELMADFGSNMVDKSAF--VMSLLMSVPESKPAIVEEGGVPV--------- 273
Query: 632 FNLFCLIRVTLPEVQQKIILTFYILCQSPLASYIRTKLNECPAIPDLVRLWE 683
L ++ V ++ + LC+ + RT + AIP LV L +
Sbjct: 274 --LVEIVEVGTQRQKEMAVSILLQLCEESV--VYRTMVAREGAIPPLVALSQ 321
>AT5G61550.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751558 FORWARD
LENGTH=845
Length = 845
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 14/106 (13%)
Query: 223 DQIIALLERADVASSPRERQLKHLA-KRQSLGSQILE-PLQSFYCPITHDVMVDPVETSS 280
DQII LER L+ +A K Q+L S+ P F CP+ VM +P +
Sbjct: 748 DQIIPALER-----------LRKVADKAQNLLSRTPSGPPSHFICPLLKGVMNEPCVAAD 796
Query: 281 AHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSIEEWK 326
+T++R AIE+W+ + + P+T +PL L N TL +I EWK
Sbjct: 797 GYTYDREAIEEWLRQKD-TSPVTNLPLPNKNLIANYTLYSAIMEWK 841
>AT3G11840.1 | Symbols: PUB24 | plant U-box 24 |
chr3:3736578-3738250 REVERSE LENGTH=470
Length = 470
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 263 FYCPITHDVMVDPVETSSAHTFERSAIEKWVAEGNKLCPLTLIPLDI-SILRPNKTLKQS 321
F CPI+ ++M DPV T S T++R I KW+ E CP+T PL + S L PN L++
Sbjct: 28 FICPISLEIMKDPVTTVSGITYDRQNIVKWL-EKVPSCPVTKQPLPLDSDLTPNHMLRRL 86
Query: 322 IEEW 325
I+ W
Sbjct: 87 IQHW 90
>AT5G61550.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751805 FORWARD
LENGTH=860
Length = 860
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 14/106 (13%)
Query: 223 DQIIALLERADVASSPRERQLKHLA-KRQSLGSQILE-PLQSFYCPITHDVMVDPVETSS 280
DQII LER L+ +A K Q+L S+ P F CP+ VM +P +
Sbjct: 748 DQIIPALER-----------LRKVADKAQNLLSRTPSGPPSHFICPLLKGVMNEPCVAAD 796
Query: 281 AHTFERSAIEKWVAEGNKLCPLTLIPLDISILRPNKTLKQSIEEWK 326
+T++R AIE+W+ + + P+T +PL L N TL +I EWK
Sbjct: 797 GYTYDREAIEEWLRQKD-TSPVTNLPLPNKNLIANYTLYSAIMEWK 841