Miyakogusa Predicted Gene

Lj0g3v0200159.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0200159.1 Non Chatacterized Hit- tr|I1MQK5|I1MQK5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24871
PE,38.46,4e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.12695.1
         (138 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G20660.1 | Symbols: AtOCT4, 4-Oct | organic cation/carnitine ...   174   1e-44
AT1G73220.1 | Symbols: AtOCT1, 1-Oct | organic cation/carnitine ...    84   4e-17
AT1G16370.1 | Symbols: ATOCT6, OCT6 | organic cation/carnitine t...    65   2e-11
AT1G79360.1 | Symbols: ATOCT2, OCT2, 2-Oct | organic cation/carn...    64   2e-11
AT1G16390.1 | Symbols: ATOCT3, 3-Oct | organic cation/carnitine ...    63   5e-11
AT1G79410.1 | Symbols: AtOCT5, 5-Oct | organic cation/carnitine ...    59   1e-09

>AT3G20660.1 | Symbols: AtOCT4, 4-Oct | organic cation/carnitine
           transporter4 | chr3:7225271-7228510 REVERSE LENGTH=526
          Length = 526

 Score =  174 bits (442), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 91/136 (66%), Positives = 102/136 (75%), Gaps = 11/136 (8%)

Query: 7   DDLRTPMLPAAEKKAEVE---KICIDEMLQKYCGEFGRWQLKHFVLTSLAWALEAFHTMV 63
           +D+R P+L     K E E   ++CIDEMLQ+YCGEFGRWQLKHFVLT +AWALEAFHTMV
Sbjct: 10  NDVRQPLLEKIPVKKEAEGEERLCIDEMLQRYCGEFGRWQLKHFVLTCIAWALEAFHTMV 69

Query: 64  MIFADXXXXXXXXXRCVAGSGCSAAVGSV-CGLRPGEWEWVGGNGASTVSEWGLICGEKY 122
           MIFAD         RCV GS C   VGS+ C L P  WEW  G G+STVSEWGLICG+KY
Sbjct: 70  MIFAD----QEPEWRCV-GSDCR--VGSLNCELDPSSWEWTAGKGSSTVSEWGLICGDKY 122

Query: 123 KVGLVQAIFFAGCMIG 138
           KVGLVQA+FFAGCMIG
Sbjct: 123 KVGLVQALFFAGCMIG 138


>AT1G73220.1 | Symbols: AtOCT1, 1-Oct | organic cation/carnitine
           transporter1 | chr1:27538387-27540109 FORWARD LENGTH=539
          Length = 539

 Score = 83.6 bits (205), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 5/113 (4%)

Query: 26  ICIDEMLQKYCGEFGRWQLKHFVLTSLAWALEAFHTMVMIFADXXXXXXXXXRCVAGSGC 85
           + +DE+++++ G  G  Q+ H +L S+AW  +A  T++ IF+D         R +A +G 
Sbjct: 43  LTVDEVIEQHIGALGFAQILHALLVSIAWIFDAQTTLISIFSDAQPAA----RLLA-TGA 97

Query: 86  SAAVGSVCGLRPGEWEWVGGNGASTVSEWGLICGEKYKVGLVQAIFFAGCMIG 138
                S+CGL  GEWEW+G    + VSEW LIC  K+ V +   +FF G + G
Sbjct: 98  IVEGASLCGLASGEWEWIGPKSDTVVSEWNLICQHKFLVAVPSTLFFIGSLFG 150


>AT1G16370.1 | Symbols: ATOCT6, OCT6 | organic cation/carnitine
           transporter 6 | chr1:5596762-5598327 FORWARD LENGTH=521
          Length = 521

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 11/141 (7%)

Query: 5   LSDDLRTPMLP------AAEKKAEVEKICIDEMLQKYCGEFGRWQLKHFVLTSLAWALEA 58
           ++D +  P+L          +K  +E +  D+++++   +FG WQ     L  LA   +A
Sbjct: 1   MADPISEPLLSHLTDDSGVNEKTRLEALTFDKIVEQSLSDFGFWQFFQISLVGLALLFDA 60

Query: 59  FHTMVMIFADXXXXXXXXXRCVAGSGCSAAVGSVCGLRPGEWEWVGGN-GASTVSEWGLI 117
               + ++ D          C+  + C  +   +C L    WEW GG+ G S +SE+GL 
Sbjct: 61  QQIFITVYTD----AYPTWHCLNHTICDPSASDICKLPRSAWEWDGGSQGKSVISEFGLE 116

Query: 118 CGEKYKVGLVQAIFFAGCMIG 138
           C      G+  + F+ G ++G
Sbjct: 117 CSSSLLRGMPSSAFYIGAIVG 137


>AT1G79360.1 | Symbols: ATOCT2, OCT2, 2-Oct | organic
           cation/carnitine transporter 2 | chr1:29854140-29855723
           REVERSE LENGTH=527
          Length = 527

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 5/128 (3%)

Query: 12  PMLPAAEKKAEVEKICIDEMLQKYCGEFGRWQLKHFVLTSLAWALEAFHTMVMIFADXXX 71
           P  P            +D+ ++ Y G FG  Q     L S +   +A  T + +F D   
Sbjct: 4   PTQPLLTDSNSSSPRSLDDTIESYIGSFGWAQFLQAALVSFSGVFDAQQTFISVFTDSEP 63

Query: 72  XXXXXXRCV-AGSGCSAAVGSVCGLRPGEWEWVGGNGASTVSEWGLICGEKYKVGLVQAI 130
                  C  + S C  ++ ++C L    W W      S +SEWGL C   +  GL ++ 
Sbjct: 64  TW----HCTDSNSICHESISNICILPKTAWSWDYSPHVSVISEWGLQCAGSFVKGLPESS 119

Query: 131 FFAGCMIG 138
           FF GC+IG
Sbjct: 120 FFVGCLIG 127


>AT1G16390.1 | Symbols: ATOCT3, 3-Oct | organic cation/carnitine
           transporter 3 | chr1:5602921-5604477 FORWARD LENGTH=518
          Length = 518

 Score = 63.2 bits (152), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 50/111 (45%)

Query: 28  IDEMLQKYCGEFGRWQLKHFVLTSLAWALEAFHTMVMIFADXXXXXXXXXRCVAGSGCSA 87
           ++E +++  G+FG  Q     L S AW  +A  T + +F D              S C+ 
Sbjct: 25  LEETIERCIGDFGWAQFLQAALVSFAWFFDAQQTFITVFTDSQPMWHCDNSDRVDSVCNT 84

Query: 88  AVGSVCGLRPGEWEWVGGNGASTVSEWGLICGEKYKVGLVQAIFFAGCMIG 138
           +  ++C L    W W      S +SEWGL C   +  G   + FF GC+IG
Sbjct: 85  SSSNLCTLPNQTWSWDLNPHVSIISEWGLQCAGSFLKGFPASSFFLGCLIG 135


>AT1G79410.1 | Symbols: AtOCT5, 5-Oct | organic cation/carnitine
           transporter5 | chr1:29868037-29869584 REVERSE LENGTH=515
          Length = 515

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 7/134 (5%)

Query: 8   DLRTPMLPA--AEKKAEVEKICIDEMLQKYCGEFGRWQLKHFVLTSLAWALEAFHTMVMI 65
           D   P+LP    E +     +  D++L+K   +FG  Q    VL  LA   ++    + +
Sbjct: 3   DSLAPLLPTHIEEDEDTSSPLTFDKILEKSLSDFGFSQFLQIVLVGLALTFDSQQIFITV 62

Query: 66  FADXXXXXXXXXRCVAGSGCSAAVGSVCGLRPGEWEWVGG-NGASTVSEWGLICGEKYKV 124
           F D          C+  + C+ A   +C +    W+W GG  G S +SE+ L C   +  
Sbjct: 63  FTD----AYPTWHCLDHTICNPATTDICKIPRSAWDWDGGFKGKSVISEFDLECSSSFLR 118

Query: 125 GLVQAIFFAGCMIG 138
            L  + F+ G ++G
Sbjct: 119 SLPSSTFYVGSIVG 132