Miyakogusa Predicted Gene

Lj0g3v0199549.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0199549.1 Non Chatacterized Hit- tr|I1NGZ9|I1NGZ9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,73.94,0,TIMELESS_C,Timeless C-terminal; TIMELESS,Timeless
protein; GB DEF: ARABIDOPSIS THALIANA GENOMIC DNA,,CUFF.12647.1
         (1171 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G52910.1 | Symbols: ATIM | timeless family protein | chr5:214...   822   0.0  

>AT5G52910.1 | Symbols: ATIM | timeless family protein |
            chr5:21457774-21463159 REVERSE LENGTH=1141
          Length = 1141

 Score =  822 bits (2123), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/1028 (47%), Positives = 635/1028 (61%), Gaps = 116/1028 (11%)

Query: 1    MPIEPGSTDIPQQLDYLWGLKSAVTTSDVAAVIVSFLERPLENLECDAFTEDDWKLVQLV 60
            MPIEP S DIPQQL+YLWGLKSA+T S++ AVIVS LE PLENLE D F E+DWKLVQLV
Sbjct: 106  MPIEPSSDDIPQQLEYLWGLKSAITFSNIVAVIVSLLEAPLENLELDVFNEEDWKLVQLV 165

Query: 61   LTFFRNILAVQEIPLHQKSGGFASQLLSVRDRFLELLFSDNVMDIILVISQYVGGSNAYL 120
            LT FRN+LA+ ++   QK+G      LS+RD+FLE+L  +NVMDI+LVI+Q + G N+ L
Sbjct: 166  LTLFRNLLAIHDVSPIQKAGESTCYFLSLRDQFLEVLSRENVMDIVLVITQTIEGFNSLL 225

Query: 121  SQDNLLLLEIFHYIFMGQDPELIVKAHLNGTKVSRASDDEADEIHQAK-GSRDSLRLQSI 179
              DNLLLLEI+HYI +GQD EL+ KA               +++ Q K  S DSL+  ++
Sbjct: 226  RHDNLLLLEIYHYILLGQDMELVAKA--------------PEKLDQGKQASVDSLK--TL 269

Query: 180  IDEEKKRRTTCRVGNIS-RHSQFSGTFTRVTTDGSKAVLKGNPNSSHNVLLKSQNVTRGP 238
            + EE+ +R   R+ N++ RHSQF GTFTRVT DG+KAVLKG P+++ + +LK Q   RG 
Sbjct: 270  MKEEEVKRKLARLNNMNQRHSQFGGTFTRVTMDGTKAVLKGIPSTTESTMLKPQQ-GRGA 328

Query: 239  AKKIAWDHSNLPSTNEKILKLLHGFVNQFLSGGYNVLMRSIREDIEKEHPAIQKSDXXXX 298
             +KI W+H  +  TN+K                      S+ EDIEKEHP+IQ SD    
Sbjct: 329  TEKIVWEHGPMSVTNDK----------------------SLCEDIEKEHPSIQNSDIVTF 366

Query: 299  XXXXXXXXXXXXHKYSSSKNKEGGDTFETFSDKDADTSDFS-GQICGPIAASLNESMFQL 357
                        HK S+S      +     +       +FS   IC PIAA++N+ MF L
Sbjct: 367  FQVAQSITSFQFHKSSASSPAIETEETSELTTNQKAGVNFSKSDICAPIAATINDRMFLL 426

Query: 358  VISKWRHAYDGLKETNDYKFLSAASSLLKNMIRMLDLVLKLLPEDSKEPQTARILLYKLF 417
            VISKWR A+DGLKET D+KFLSAASSL+K M+ +LDLV+KLLPEDSKE  T RILLYKLF
Sbjct: 427  VISKWRCAFDGLKETKDFKFLSAASSLVKTMLCLLDLVIKLLPEDSKEAFTVRILLYKLF 486

Query: 418  YDQTEEGMTQFLLNLMKTFDIHKQCKSDLADLVEIIHKVVKLMDNLQSRGTLXXXXXXXX 477
            YDQT++GM QF+LNL+++FD HKQ KS+L DLVE IH +V LM+NLQ RGTL        
Sbjct: 487  YDQTDQGMCQFILNLVRSFDTHKQPKSELGDLVESIHIIVGLMENLQGRGTLRVSKKSRK 546

Query: 478  XXXXXXXEGTESGNKPTGDNSCIGNEAGIPIGNQLPENQSLQKENLPSANST-----GED 532
                        GNK    +    N            N++   +++P  +ST     G  
Sbjct: 547  ARKK-----KPKGNKEATVHKLSENHPST-------SNEASTAKSIPMVDSTVSTEDGPM 594

Query: 533  CVIPNDNEHQNI-VENGDSQVGSEPVQNTNPEHCIEDMLDDTGDFSEDEQFNAISEVDFN 591
             V PN  E  N+  E  ++Q    P  N    + ++D+   + D S+ E+  A  EVDF 
Sbjct: 595  DVPPNKPEASNLETETDETQQMHSPKSN----NVVDDLSSGSDDSSDGEEQTATDEVDFK 650

Query: 592  VSTLVSAFVNHNIIQKLCWLLKFYKSNSLAINYYIIGMLRRISDDLELHPMLYQLSLLTT 651
            VST +SAF +++IIQ LCWLLKFYKSN    N+++I +LRRI++DLEL PMLYQLSLL T
Sbjct: 651  VSTFISAFASNSIIQNLCWLLKFYKSNPKQTNHHVISILRRITEDLELAPMLYQLSLLIT 710

Query: 652  FYDILVEQKSCPCKEYTEIVDFLTSLVRXXXXXXXXQPLLFVEVLFWKTRRECHYINAEY 711
            F+ IL EQK CPCK+Y  IV FLT LVR        QPLLFVE+LF KTR+ECHYINAEY
Sbjct: 711  FHKILDEQKVCPCKDYENIVTFLTDLVRNMLKKMKSQPLLFVEILFSKTRKECHYINAEY 770

Query: 712  LLDELGHLKKKHINGNDAQGDGEIGSSPVNVWTRRSIADALGDDEADVVISHDSGYQNHE 771
            +L ELGHL+K+  N     G  E G+S    W  RS+ADALGDDEADVVIS+D G+QN +
Sbjct: 771  MLHELGHLRKQMGNQEKFSGTEEFGTSSDKGWAHRSLADALGDDEADVVISYDQGFQNED 830

Query: 772  ENIDDVIEGLASTSGQDDINGEQLAADESQIAPRRKKKLILNAELEREIKDLYERFKDER 831
               DD++E                  D+S    +RK++L+L+ +++ +IKDLY+R+KD++
Sbjct: 831  ---DDMVE------------------DKSAGPSKRKRRLVLDGDMDIKIKDLYDRYKDDK 869

Query: 832  NCSRCIAEVLDPDGKISPAQISNTLKKLGLRVSPRQKIGDAEKPSSTSRNQLEGGDGTGV 891
            NCSR IAE L PDG IS AQ++N LK+LGL    R + G                 GT  
Sbjct: 870  NCSRLIAENLVPDGGISAAQVTNKLKQLGLETRKRLRRG-----------------GT-- 910

Query: 892  DDHKSVNLEGSLSVQHLQKRKRVRAFNEDQEAMIKVLYEQFKDHRRCSYMIANALDVDGK 951
             DH    L+ +   Q    RKRV +F+++QE +IK LY++FKD +RC Y+IA+ L  +  
Sbjct: 911  -DH----LDATSLAQPSNTRKRVSSFSKEQETLIKELYKKFKDEKRCCYLIASELGSENT 965

Query: 952  FTPAQVSRKLKQLGLFVP--KKSSKGKMHPNSEDLMECSEDRINESDDETLISLIERKKV 1009
            +T AQVSRKLKQLGL +P  KKS  G M  +  D     +   +ES+DETL++   RK  
Sbjct: 966  YTTAQVSRKLKQLGLRLPRGKKSEAGMMLKDDHD-----DSSADESEDETLLAFKNRKSR 1020

Query: 1010 NSKGSSEQ 1017
             ++ + +Q
Sbjct: 1021 KNQKNKQQ 1028