Miyakogusa Predicted Gene

Lj0g3v0199279.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0199279.3 Non Chatacterized Hit- tr|B9RDH4|B9RDH4_RICCO
Transferase, transferring glycosyl groups, putative
OS,49.48,0.0000000000001,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL,CUFF.12626.3
         (157 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G61130.1 | Symbols: GAUT1, LGT1 | galacturonosyltransferase 1...    95   2e-20

>AT3G61130.1 | Symbols: GAUT1, LGT1 | galacturonosyltransferase 1 |
           chr3:22622399-22625514 FORWARD LENGTH=673
          Length = 673

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 54/127 (42%), Positives = 73/127 (57%), Gaps = 2/127 (1%)

Query: 11  FVLLCVFASVIFFLGPGLHAFDQDDISSVPSKQVAKWREWQTLQDLKSLFSKEVLDLIAS 70
            +  CVFA + FF+G G++    +D S V  KQ   WRE   +Q ++SLFSKE+LD+IA+
Sbjct: 27  LIFFCVFAPLCFFVGRGVYIDSSNDYSIVSVKQNLDWRERLAMQSVRSLFSKEILDVIAT 86

Query: 71  STDDMGPLSLDNFRK-KLSASWRVVGSETSNATYELNQPTTYVRQGKPKVTEGQSSDDGL 129
           ST D+GPLSLD+F+K  LSASWR  G + S    E N  T  V+           S D +
Sbjct: 87  STADLGPLSLDSFKKNNLSASWRGTGVDPSFRHSE-NPATPDVKSNNLNEKRDSISKDSI 145

Query: 130 AQWTHSP 136
            Q   +P
Sbjct: 146 HQKVETP 152