Miyakogusa Predicted Gene

Lj0g3v0199179.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0199179.1 CUFF.12627.1
         (1407 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G15680.1 | Symbols:  | ARM repeat superfamily protein | chr5:...  2417   0.0  

>AT5G15680.1 | Symbols:  | ARM repeat superfamily protein |
            chr5:5101188-5110793 REVERSE LENGTH=2153
          Length = 2153

 Score = 2417 bits (6264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1172/1418 (82%), Positives = 1277/1418 (90%), Gaps = 11/1418 (0%)

Query: 1    MLSNFLAPLADGGKCQWPPTGVEPALQLWFEAVGRIRLQLMHWMDKQNKHIAVGYPLVTI 60
            MLSN LAPL+DGGK QWPP+  EPAL LW+EAVGRIR+QL+ WM+KQ+KH+ VGYPLV++
Sbjct: 240  MLSNILAPLSDGGKSQWPPSVAEPALTLWYEAVGRIRVQLIQWMEKQSKHLGVGYPLVSL 299

Query: 61   LLCLGDPQIFHNNLSSHMEQLYRHLRDKNHRFMALDCLHRVLRFYLTVHASNQAPNRIWD 120
            LLCLGDP IFH+NLSSHMEQLY+ LRDKNHR+MALDCLHRVLRFYL+V+AS+Q PNRIWD
Sbjct: 300  LLCLGDPLIFHHNLSSHMEQLYKLLRDKNHRYMALDCLHRVLRFYLSVYASSQPPNRIWD 359

Query: 121  YLDSVTLQLLAALRKGMLTQDVQHDKLVEFCVTIAEHNLDFTMNHMILELLKQDSPSEAK 180
            YLDSVT QLL  LRKGMLTQDVQ DKLVEFCVTIAEHNLDF MNHM+LELLKQDSPSEAK
Sbjct: 360  YLDSVTSQLLTVLRKGMLTQDVQQDKLVEFCVTIAEHNLDFAMNHMLLELLKQDSPSEAK 419

Query: 181  VIGLRALLAIVMLPSSPHFGLDIFKGHGIGHYIPKVKAAIESILRSCHKTYSQALLTSSR 240
            +IGLRALLA+VM PSS + GL+IFKGHGIGHYIPKVKAAIESILRSCH+TYSQALLTSSR
Sbjct: 420  IIGLRALLALVMSPSSQYVGLEIFKGHGIGHYIPKVKAAIESILRSCHRTYSQALLTSSR 479

Query: 241  TTIDAVTKEKSQGYLFRSVLKCIPYLIEEVGRSDKITEIIPQHGISIDPGVREEAVQVLN 300
            TTIDAV KEKSQG LF+SVLKCIPYLIEEVGRSDKITEIIPQHGISIDPGVR EAVQVLN
Sbjct: 480  TTIDAVNKEKSQGSLFQSVLKCIPYLIEEVGRSDKITEIIPQHGISIDPGVRVEAVQVLN 539

Query: 301  RIVKYLPHRRFAVMKGMANFILRLPDEFPLLIQTSLGRLLELMRFWRSCLIDDRMQLDA- 359
            RIV+YLPHRRFAVM+GMANFIL+LPDEFPLLIQ SLGRLLELMRFWR+CL+DDR   DA 
Sbjct: 540  RIVRYLPHRRFAVMRGMANFILKLPDEFPLLIQASLGRLLELMRFWRACLVDDRQDTDAE 599

Query: 360  DGNSLGHETERFRKPTFPQSGEAIEFRASEIDAVGLIFLSSVDSQIRHTALELLRCVRAL 419
            + N      +RF+K +F Q+ +AIEFRAS+IDAVGLIFLSSVDSQIRHTALELLRCVRAL
Sbjct: 600  EENKTAKGNDRFKKLSFHQAADAIEFRASDIDAVGLIFLSSVDSQIRHTALELLRCVRAL 659

Query: 420  RNDIRDLTIQEQPNHIWKYEAEPIFIIDVLEEHGDEIVQNCYWDSGRPFDLKREPDAIPP 479
            RNDIRDL IQE P+H+ K+EAEPI++IDVLEEHGD+IVQ+CYWDS RPFDL+R+ DAIP 
Sbjct: 660  RNDIRDLMIQEHPDHVMKFEAEPIYMIDVLEEHGDDIVQSCYWDSARPFDLRRDSDAIPS 719

Query: 480  EVTLQSIIFESPDKNRWARCLSELVKYAAELCPSSVQEAKIEVMQRLTHITPFELGGKAH 539
            +VTLQSIIFES DKN+W RCLSELVKYAAELCP SVQEAK E+M RL HITP E GGKA+
Sbjct: 720  DVTLQSIIFESLDKNKWGRCLSELVKYAAELCPRSVQEAKSEIMHRLAHITPVEFGGKAN 779

Query: 540  QSQDVDNKLDQWLMYAMFVCSCPPVARESSGIGATKDLYHLIFPSLKSGSDAHVHAATMA 599
            QSQD DNKLDQWL+YAMFVCSCPP  +++  I +T+D+YHLIFP L+ GS+ H HAATMA
Sbjct: 780  QSQDTDNKLDQWLLYAMFVCSCPPDGKDAGSIASTRDMYHLIFPYLRFGSETHNHAATMA 839

Query: 600  LGRSHLEACEIMFSELASFIEEVSSETEGKPKWKSQK-SRREELRVHIANIYRTVAENVW 658
            LGRSHLEACEIMFSELASF+EE+SSETE KPKWK QK  RRE+LRVH++NIYRTV+ENVW
Sbjct: 840  LGRSHLEACEIMFSELASFMEEISSETETKPKWKIQKGGRREDLRVHVSNIYRTVSENVW 899

Query: 659  PGMLVRKPVFRLHYLKFIEETTRLISTSS-ESFQDTQPFRYALACVIRSLAPEFVDSKSE 717
            PGML RKPVFRLHYL+FIE++TR IS +  ESFQD QP RYALA V+R LAPEFV+SKSE
Sbjct: 900  PGMLARKPVFRLHYLRFIEDSTRQISLAPHESFQDMQPLRYALASVLRFLAPEFVESKSE 959

Query: 718  KFDVRTRKRLFDLLLSWCDDTGSTWGQDGVSDYRREVDRYKSSQHARSKDSVDKLSFDKE 777
            KFDVR+RKRLFDLLLSW DDTG+TWGQDGVSDYRREV+RYK+SQH RSKDSVDK+SFDKE
Sbjct: 960  KFDVRSRKRLFDLLLSWSDDTGNTWGQDGVSDYRREVERYKTSQHNRSKDSVDKISFDKE 1019

Query: 778  LNEQVEAIQWASMNAIASLLYGPCFDDSAKKMSGRVIYWINALFLEPTPRAPFGFSPADP 837
            LNEQ+EAIQWAS+NA+ASLLYGPCFDD+A+KMSGRVI WIN+LF+EP PR PFG+SPADP
Sbjct: 1020 LNEQIEAIQWASLNAMASLLYGPCFDDNARKMSGRVISWINSLFIEPAPRVPFGYSPADP 1079

Query: 838  RTPSYTKYQGEGGRGNTGRDRLRGGHHRVSXXXXXXXXXXXXXXXXFPSCIDQCYYSNSS 897
            RTPSY+KY GEGGRG TGRDR RGGH RV+                FP+CIDQCYYS+++
Sbjct: 1080 RTPSYSKYTGEGGRGTTGRDRHRGGHQRVALAKLALKNLLLTNLDLFPACIDQCYYSDAA 1139

Query: 898  VADGYFSVLAEVYMRQEIPNFEIQRLLSLILYKVVDPSRQIRDDALQMLETLSVREWAED 957
            +ADGYFSVLAEVYMRQEIP  EIQRLLSLILYKVVDPSRQIRDDALQMLETLS+REWAED
Sbjct: 1140 IADGYFSVLAEVYMRQEIPKCEIQRLLSLILYKVVDPSRQIRDDALQMLETLSMREWAED 1199

Query: 958  GIDGSGSYRAAVVGNLPDSYQQFQYKLSCKLAKDHPELSQLLCEEIMLRQLDAVDIIAQH 1017
            GI+GSG YRAAVVGNLPDSYQQFQYKLSCKLAKDHPELSQLLCEEIM RQLDAVDIIAQH
Sbjct: 1200 GIEGSGGYRAAVVGNLPDSYQQFQYKLSCKLAKDHPELSQLLCEEIMQRQLDAVDIIAQH 1259

Query: 1018 QVLTCMAPWIENLNFWKLKE-GWSERLLKSFYYVTSRHGDQFPDEIEKLWSTIASKNSNI 1076
            QVLTCMAPWIENLNFWKLK+ GWSERLLKS YYVT RHGDQFPDEIEKLWSTIASK  NI
Sbjct: 1260 QVLTCMAPWIENLNFWKLKDSGWSERLLKSLYYVTWRHGDQFPDEIEKLWSTIASKPRNI 1319

Query: 1077 SPVLDFLITKGIEDCDSNASTEISGAFATYFSVAKRVSLYLARICPQRTIDHLVFQLSQR 1136
            SPVLDFLITKGIEDCDSNAS EI+GAFATYFSVAKRVSLYLARICPQRTIDHLV+QLSQR
Sbjct: 1320 SPVLDFLITKGIEDCDSNASAEITGAFATYFSVAKRVSLYLARICPQRTIDHLVYQLSQR 1379

Query: 1137 LLEDSIELVGPSASKGDCNANFVLEFSQGPAVA-QMASVMDNQPHMSPLLVRGSLDGPLR 1195
            +LEDSIE +G SA++GD N NFVLEFSQGPA A Q+ SV D+QPHMSPLLVRGSLDGPLR
Sbjct: 1380 MLEDSIEPIGYSANRGDSNGNFVLEFSQGPATAPQVVSVADSQPHMSPLLVRGSLDGPLR 1439

Query: 1196 NVSGSLSWRTAGMTGRSVSGPLSPMPPELNIVPVSTGRSGQLLPSLVNMSGPLMGVRSST 1255
            N SGSLSWRTAGMTGRS SGPLSPMPPELNIVPV+TGRSGQLLPSLVN SGPLMGVRSST
Sbjct: 1440 NTSGSLSWRTAGMTGRSASGPLSPMPPELNIVPVATGRSGQLLPSLVNASGPLMGVRSST 1499

Query: 1256 GSLRSRHVSRDSGDYLVDTPNSGED------AGGAVNAKELQSALQGHQQHSLTHADXXX 1309
            GSLRSRHVSRDSGDYL+DTPNSGED      A   VNAKELQSALQGHQQHSLTHAD   
Sbjct: 1500 GSLRSRHVSRDSGDYLIDTPNSGEDVLHSGIAMHGVNAKELQSALQGHQQHSLTHADIAL 1559

Query: 1310 XXXXXXXYENDEDFRQYLPLLFHVIFVSMDSSEDIVLEHCQHLLVNLLYSLAGRHLEQYE 1369
                   YENDEDFR++LPLLFHV FVSMDSSEDIVLEHCQHLLVNLLYSLAGRHLE YE
Sbjct: 1560 ILLAEIAYENDEDFREHLPLLFHVTFVSMDSSEDIVLEHCQHLLVNLLYSLAGRHLELYE 1619

Query: 1370 VENNDRENKQQVVSLIKYVQSKRGSMMWENEDPTVVRT 1407
            VEN+D ENKQQVVSLIKYVQSKRGSMMWENEDPTVVRT
Sbjct: 1620 VENSDGENKQQVVSLIKYVQSKRGSMMWENEDPTVVRT 1657