Miyakogusa Predicted Gene

Lj0g3v0198769.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0198769.1 Non Chatacterized Hit- tr|I1MPU8|I1MPU8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,71.38,0,seg,NULL,CUFF.12593.1
         (1173 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G52290.1 | Symbols: SHOC1 | shortage in chiasmata 1 | chr5:21...   544   e-154

>AT5G52290.1 | Symbols: SHOC1 | shortage in chiasmata 1 |
            chr5:21230353-21236554 REVERSE LENGTH=1594
          Length = 1594

 Score =  544 bits (1401), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 408/1173 (34%), Positives = 604/1173 (51%), Gaps = 108/1173 (9%)

Query: 57   CIPLPDNLPEEFTS-SNLLQHG--SSKQGCRE----QLPCREQLPERDAERASLFFKSMS 109
            C PL +   E F   SNL +H   ++  G  E    +   R+   + +A++A+L FKSMS
Sbjct: 462  CEPLVEKCTEPFYGISNLDEHAPVNTSHGLLENPFQKTGARDCAVDDNAKKATLLFKSMS 521

Query: 110  EISNLEYFLNPKYVTDKANCNFAVESTNANVNIPKDTSTEFKAGLQSHGWH-------TV 162
               +L +F++PK    + N    VE+  A     K  S + KA  +S G H        +
Sbjct: 522  AFDDLTFFMDPKKAVIEDNLESRVEA--AKTTNHKCMSIDSKASCRSGGMHPNPKTEEMI 579

Query: 163  LHRIKLSDNIVAITAYFEKCYLAILQSDTELTKMYNPDVDYFKLLSFPKRKLFEYHVNGN 222
            LH ++ S+NI A+   F K YL +++ ++E     N   D  KLLS  K KL +     N
Sbjct: 580  LHSVRPSENIQALVGEFVKSYLTLVKDESE-----NLSEDKLKLLSISKGKLIDCIRKAN 634

Query: 223  ----------NMAFIALSAIKQAAWYLSFYGLNPACLYVDKLCQNLDYLKSRLGFLQSLI 272
                         F  L AIKQ  WY+ F+G++ A +Y++K+C++ + +K  L  L S +
Sbjct: 635  VHKTQLADDKTFTFALLLAIKQMTWYMCFFGIHVAYIYLNKVCRSSNPMKIGLHTLYSAV 694

Query: 273  KYENRKVDGSYTIAHPSLTIVKEILQSSIKSNSLKALIVAEEVFWWXXXXXXXXXXXXXX 332
            + E++  +   T +HPSL +++ ILQS     + KAL++AE+VFW               
Sbjct: 695  ETEHKSDETDITRSHPSLAVIQGILQSEFARGNSKALLLAEKVFW---SSLKRLLMSMGL 751

Query: 333  XXXDSYRNQPYASNLPEDTNTKMKELLNSDCLLVSHKHVSLLFPFNKFGIILEYGGPYGS 392
               D     P  +        ++  L  SDCL++S++ +S  FP   F +I+EYGGP  S
Sbjct: 752  SYNDLNSPSPSGNRPNVHEAIELGFLPISDCLIISYEQISPSFPVENFSVIVEYGGPNAS 811

Query: 393  SRISELSPNSVGK-PHLHFLTIDLDDHAASKALCEGVETPPNTGMLLESETPLIFYHKES 451
             R S   P+ +   P  HF+ ++LD  +A   LC GV  P +  M+   E          
Sbjct: 812  PRYS--FPSKLDSFPSFHFIKVELDMPSACGQLCAGVTVPYSLKMIKGDEV--------E 861

Query: 452  MANQKLERLLNFCPVEQSYGIESSKVAPETDNFVPVITAAQSEHG--NQSLEPFSGSVII 509
                 LE +LNF P+E+     SS+   E++ F+ +   ++ + G   Q L     SVI+
Sbjct: 862  TKTGWLEEVLNFVPLEKVCYAGSSETTNESE-FISMPQESERKRGIIEQGLSD-QRSVIV 919

Query: 510  VNTQNIDKEMIVSRRSSYQVILAMEKGGVQVVERDLDLPVDIIISSGICLAWYDSRNLGK 569
            VNT+ +DKEMI+SRRS+YQ +LAMEK GVQVVERD DLPVD+++S  +CL WYDS  + K
Sbjct: 920  VNTKTVDKEMIISRRSTYQKVLAMEKEGVQVVERDSDLPVDLMLSPAVCLLWYDSETVSK 979

Query: 570  KGTPATEASSSLPLCIDNIATDVLTLLSFYFRGCFLVFEGEFDFLSIVMESSDGLYAAAA 629
            K       SSS    I +IAT+VLT LSF F  C +VFEGE  FL+ VM+SSD LYAAA 
Sbjct: 980  KSAATIGTSSSSLSWIGDIATNVLTSLSFSFSTCIMVFEGEPAFLAAVMDSSDELYAAAG 1039

Query: 630  SLGIDLQIFFSYSPELSNEVILSCIKNAAKLTRGLYPKMPDSVTLAESFLTQFPGINPLT 689
            SLGI LQ+F S S  L++E+IL CIK++ KL++ L+ KMP+S +LAESFLT+FP +NPLT
Sbjct: 1040 SLGISLQMFCSSSANLTDEIILKCIKSSVKLSK-LHVKMPESESLAESFLTKFPSVNPLT 1098

Query: 690  AHSILSSGAMLNEFLECSHEQRMRVLENYDVPEESLSLFSVFCKYGEREDSKSIMTXXXX 749
            A  ILSS   L EF++  H+ ++   + Y VPEES+ LFS  C+YG REDS+S+MT    
Sbjct: 1099 AQVILSSSGSLLEFMKLPHKSKVERTQKYHVPEESVDLFSSVCRYGAREDSRSVMT-DSS 1157

Query: 750  XXXXXXXXXRCHRYQVDNKRKRKNPISSHQKDEQYFDELLQF------------------ 791
                       H   V +  K+K  I+  +KDE   D+L+ F                  
Sbjct: 1158 SSVSSGPDSDTHHVSVHSGSKKKQYIA--EKDEIDMDDLVHFSPSIEFADTQLKSSGDFQ 1215

Query: 792  -----KTLNQEV---EAIPDSSTLP-KPFDLGMSKAAGRSSDLEKASLCMSDFFDQKQ-P 841
                  + + E+   + + + S  P KP  +     +  S D E+        FD+K  P
Sbjct: 1216 LDDSWSSKDHEIFHFDPVTEFSDAPFKPSGISHPNDSWPSKDPER--------FDKKSGP 1267

Query: 842  ITASTMRNPSRVYPS-SRNSKAPRISEQVEQPCLSFKNNELVQNEILDIDLMGKSMNWNS 900
             ++S      +  P  S     P I E +E      K+  + QN      +M +  N + 
Sbjct: 1268 GSSSKDTFWEKDQPDFSVEDSLPGIPE-LEDWSFPVKDKFMSQNRGCKFPVM-RDFNLHD 1325

Query: 901  LSSSEKLHEDIRGEVVDLTDSPLLDESFPMS-DFMYFPNLVTDTEKDQL-RKSKIARRLS 958
              +SE    D +GEV+D  D   L+E FP S  +  F  +V+D  +++L RKSK +R+LS
Sbjct: 1326 NRNSENFIADYKGEVIDRADK-YLEEDFPPSPGYNRFARIVSDVNEEELPRKSKSSRKLS 1384

Query: 959  FNNRSHPA-TNSSEIWKSLQDTAREVDDYPEPDFGKDVFPLDFKPPENVGLTQVAMTNLQ 1017
            F     P    +++I  S +  A E D   + +     +  ++       L +  +T   
Sbjct: 1385 FFGSLQPNFPKAADIDSSSERYATEKDSKYDNNTSLRGYADNYPAKRQRTLLEEVLTRRS 1444

Query: 1018 G-----LHFQDRMSHLSETXXXXXXXXXXXXXXXXWTIDFLNKVKEKSKLR--QKSLSYQ 1070
                  L F++ +SH   +                WT+DFLN+V+E+S+ R  Q+SL   
Sbjct: 1445 AVPTTELPFREEISHFGGSPLSNAIRSSNQVQSSPWTVDFLNRVRERSRARKQQQSLPSY 1504

Query: 1071 KSRPCFGYQGNVSKV-PKRRSPSIIEFFKYQPGRTPGNFPEQKRQKQSGQSSNSVKKGRY 1129
             S P     GN+ K   KR+SPSI+EFFKY+ G       E+KRQK+S  SS S K  R+
Sbjct: 1505 ASPPSLETPGNIKKANTKRKSPSILEFFKYKGG---NKLQEEKRQKRSKNSSASPKNERF 1561

Query: 1130 STCVPSWTPDDKRSTKALTFGKKESGSQTKLVW 1162
             + + S TP DKR+ ++L++    +G QTKLVW
Sbjct: 1562 YSPLKSCTPIDKRAKQSLSYTANGTG-QTKLVW 1593