Miyakogusa Predicted Gene
- Lj0g3v0198599.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0198599.1 CUFF.12584.1
(372 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 290 9e-79
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 93 3e-19
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 92 6e-19
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 91 1e-18
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 90 3e-18
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 89 3e-18
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 89 5e-18
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 89 5e-18
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 89 5e-18
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 89 6e-18
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 88 7e-18
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 87 3e-17
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 86 3e-17
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 85 8e-17
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 84 2e-16
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 83 2e-16
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 81 9e-16
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 81 1e-15
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 80 2e-15
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 80 2e-15
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 79 5e-15
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 79 5e-15
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 79 5e-15
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 79 6e-15
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 71 1e-12
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 69 5e-12
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 61 1e-09
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 61 1e-09
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 61 2e-09
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 56 5e-08
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 56 5e-08
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 53 3e-07
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 53 3e-07
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 53 3e-07
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 53 3e-07
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 53 3e-07
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 53 4e-07
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 52 7e-07
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 52 7e-07
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 52 9e-07
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 290 bits (743), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 133/179 (74%), Positives = 155/179 (86%), Gaps = 2/179 (1%)
Query: 176 RALQKCARISAELKGELFGSTGTACERYXXXXXXXXRIVTQDDVDVACASEEEDSDFQPL 235
+ALQKCA+ISA+L+ EL+G++ +RY RIVTQ+D+D AC +E DSDFQP+
Sbjct: 155 KALQKCAKISADLRKELYGTSSGVTDRYSEVETSTVRIVTQNDIDDACKAE--DSDFQPI 212
Query: 236 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCPA 295
LKPYQLVGVNFLLLLY+KGI GAILADEMGLGKTIQAITYLTLL L+ND GPHL+ CPA
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 296 SVLENWKKELKRWCPSFSILQYHGAARAAYCKELNSLSKAGLPPPFNVLLVCYSLFERH 354
SVLENW++EL++WCPSF++LQYHGAARAAY +ELNSLSKAG PPPFNVLLVCYSLFERH
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHGAARAAYSRELNSLSKAGKPPPFNVLLVCYSLFERH 331
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Query: 232 FQPLLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLI 291
F+ LK YQ+ G+ +L+ Y +G+ G ILADEMGLGKTIQA+ +L L N GP L+
Sbjct: 582 FKGTLKEYQMKGLQWLVNCYEQGLNG-ILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLV 640
Query: 292 GCPASVLENWKKELKRWCPSFSILQYHGA--ARAAYCKELNSLSKAGLPPPFNVLLVCYS 349
PASVL NW E+ R+CP L Y G R K +N F++L+ Y
Sbjct: 641 VAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGFHILITSYQ 700
Query: 350 LF 351
L
Sbjct: 701 LL 702
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 71/124 (57%), Gaps = 21/124 (16%)
Query: 236 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDS---GPHLIG 292
L+ YQ +G+++L+ +Y K + G ILADEMGLGKTI I LL HL D GPHLI
Sbjct: 536 LREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIMTI---ALLAHLACDKGIWGPHLIV 591
Query: 293 CPASVLENWKKELKRWCPSFSILQYHGAARAAYCK-----ELNSLSKAGLPPPFNVLLVC 347
P SV+ NW+ E +WCP+F IL Y G+A+ K +LNS F+V +
Sbjct: 592 VPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNS---------FHVCITT 642
Query: 348 YSLF 351
Y L
Sbjct: 643 YRLV 646
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Query: 236 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCPA 295
L+ YQL G+NFL+ + ILADEMGLGKT+Q+++ L L++ GP L+ P
Sbjct: 625 LRDYQLEGLNFLVNSWLND-TNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPL 683
Query: 296 SVLENWKKELKRWCPSFSILQYHGA-ARAAYCK--ELNSLSKAGLPPPFNVLLVCYSL 350
S L NW KE ++W P +I+ Y G A C+ E + K G P FN LL Y +
Sbjct: 684 STLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVGRPIKFNALLTTYEV 741
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 232 FQPLLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLI 291
Q L+ YQL G+N+L+ LY GI G ILADEMGLGKT+Q I+ L L +GPH++
Sbjct: 190 IQGKLRDYQLAGLNWLIRLYENGING-ILADEMGLGKTLQTISLLAYLHEYRGINGPHMV 248
Query: 292 GCPASVLENWKKELKRWCPSFSILQYHG 319
P S L NW E++R+CP +++ G
Sbjct: 249 VAPKSTLGNWMNEIRRFCPVLRAVKFLG 276
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 232 FQPLLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLI 291
Q L+ YQL G+N+L+ LY GI G ILADEMGLGKT+Q I+ L L +GPH++
Sbjct: 190 IQGKLRDYQLAGLNWLIRLYENGING-ILADEMGLGKTLQTISLLAYLHEYRGINGPHMV 248
Query: 292 GCPASVLENWKKELKRWCPSFSILQYHG 319
P S L NW E++R+CP +++ G
Sbjct: 249 VAPKSTLGNWMNEIRRFCPVLRAVKFLG 276
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 232 FQPLLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLI 291
Q ++ YQL G+N+L+ LY GI G ILADEMGLGKT+Q I+ L L +GPH++
Sbjct: 185 IQGKMRDYQLAGLNWLIRLYENGING-ILADEMGLGKTLQTISLLAYLHEYRGINGPHMV 243
Query: 292 GCPASVLENWKKELKRWCPSFSILQYHG 319
P S L NW E++R+CP +++ G
Sbjct: 244 VAPKSTLGNWMNEIRRFCPVLRAVKFLG 271
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 232 FQPLLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLI 291
Q ++ YQL G+N+L+ LY GI G ILADEMGLGKT+Q I+ L L +GPH++
Sbjct: 185 IQGKMRDYQLAGLNWLIRLYENGING-ILADEMGLGKTLQTISLLAYLHEYRGINGPHMV 243
Query: 292 GCPASVLENWKKELKRWCPSFSILQYHG 319
P S L NW E++R+CP +++ G
Sbjct: 244 VAPKSTLGNWMNEIRRFCPVLRAVKFLG 271
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 232 FQPLLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLI 291
Q ++ YQL G+N+L+ LY GI G ILADEMGLGKT+Q I+ L L +GPH++
Sbjct: 185 IQGKMRDYQLAGLNWLIRLYENGING-ILADEMGLGKTLQTISLLAYLHEYRGINGPHMV 243
Query: 292 GCPASVLENWKKELKRWCPSFSILQYHG 319
P S L NW E++R+CP +++ G
Sbjct: 244 VAPKSTLGNWMNEIRRFCPVLRAVKFLG 271
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 232 FQPLLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLI 291
F+ LK YQ+ G+ +L+ Y +G+ G ILADEMGLGKTIQA+ +L L N GP L+
Sbjct: 582 FKGTLKEYQMKGLQWLVNCYEQGLNG-ILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLV 640
Query: 292 GCPASVLENWKKELKRWCPSFSILQYHGA--ARAAYCKELN 330
PASVL NW E+ R+CP L Y G R K +N
Sbjct: 641 VAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNIN 681
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 70/126 (55%), Gaps = 13/126 (10%)
Query: 236 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCPA 295
L+ YQLVG+ ++L LY + G ILADEMGLGKT+Q + + L + GPHLI P
Sbjct: 981 LRDYQLVGLQWMLSLYNNKLNG-ILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPN 1039
Query: 296 SVLENWKKELKRWCPSFSILQYHGAA---RAAYCKELNSLSKAGLPPPFNVLLVCYS--L 350
+VL NWK EL W PS S + Y G + +E+ ++ FNVL+ Y +
Sbjct: 1040 AVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEVCAMK-------FNVLVTTYEFIM 1092
Query: 351 FERHRF 356
++R +
Sbjct: 1093 YDRSKL 1098
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 67/123 (54%), Gaps = 8/123 (6%)
Query: 236 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCPA 295
L+ YQLVG+ ++L LY + G ILADEMGLGKT+Q + + L + GPHLI P
Sbjct: 981 LRDYQLVGLQWMLSLYNNKLNG-ILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPN 1039
Query: 296 SVLENWKKELKRWCPSFSILQYHGAARAAYCKELNSLSKAGLPPPFNVLLVCYS--LFER 353
+VL NWK EL W PS S + Y G + + L FNVL+ Y +++R
Sbjct: 1040 AVLVNWKSELHTWLPSVSCIYYVGTK-----DQRSKLFSQVKFEKFNVLVTTYEFIMYDR 1094
Query: 354 HRF 356
+
Sbjct: 1095 SKL 1097
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 236 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCPA 295
LKP+Q+ GV++L+ Y G+ + D+MGLGKT+QAI++L+ LK GP L+ CP
Sbjct: 51 LKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPL 110
Query: 296 SVLENWKKELKRWCPSFSILQYHGAARAAYCK--ELNSLSKAGLPPPFNVLLVCYSL 350
SV + W E+ R+ P+ +L+Y G YC+ S+ G PF+VLL Y +
Sbjct: 111 SVTDGWVSEINRFTPNLEVLRYVG---DKYCRLDMRKSMYDHGHFLPFDVLLTTYDI 164
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query: 236 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCPA 295
L+ YQL G+ +++ LY G ILADEMGLGKTIQ I + L + GPHLI P
Sbjct: 386 LRSYQLEGLQWMVSLYNNDYNG-ILADEMGLGKTIQTIALIAYLLESKDLHGPHLILAPK 444
Query: 296 SVLENWKKELKRWCPSFSILQYHGAARAAYCKELNSLSKAGLP-PPFNVLLVCYSLFERH 354
+VL NW+ E W PS S Y G+ KE + +A + FNVL+ Y L R
Sbjct: 445 AVLPNWENEFALWAPSISAFLYDGS------KEKRTEIRARIAGGKFNVLITHYDLIMRD 498
Query: 355 RFF 357
+ F
Sbjct: 499 KAF 501
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 11/123 (8%)
Query: 236 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCPA 295
LKP+Q+ GV++L+ Y G+ + D+MGLGKT+QAI++L+ LK GP L+ CP
Sbjct: 51 LKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPL 110
Query: 296 SVLENWKKELKRWCPSFSILQYHGAARAAYCK--------ELNSLSKAGLPPPFNVLLVC 347
SV + W E+ R+ P+ +L+Y G YC+ + S G PF+VLL
Sbjct: 111 SVTDGWVSEINRFTPNLEVLRYVG---DKYCRLDMRKSMYDHVKKSSKGHFLPFDVLLTT 167
Query: 348 YSL 350
Y +
Sbjct: 168 YDI 170
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 70/119 (58%), Gaps = 11/119 (9%)
Query: 236 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCPA 295
LK YQL GV +L+ L++ G+ G ILAD+MGLGKTIQ I +L+ LK D GP+L+ P
Sbjct: 202 LKSYQLKGVKWLISLWQNGLNG-ILADQMGLGKTIQTIGFLSHLKGNGLD-GPYLVIAPL 259
Query: 296 SVLENWKKELKRWCPSFSILQYHGAARAAYCKELNSLSKAGLP----PPFNVLLVCYSL 350
S L NW E+ R+ PS + + YHG + + L + +P P F +++ Y +
Sbjct: 260 STLSNWFNEIARFTPSINAIIYHGDK-----NQRDELRRKHMPKTVGPKFPIVITSYEV 313
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 71/137 (51%), Gaps = 10/137 (7%)
Query: 236 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCPA 295
L+ YQL G+ +++ L+ + G ILADEMGLGKTIQ I+ + L GP+LI P
Sbjct: 403 LRSYQLEGLQWMVSLFNNNLNG-ILADEMGLGKTIQTISLIAYLLENKGVPGPYLIVAPK 461
Query: 296 SVLENWKKELKRWCPSFSILQYHG--AARAAYCKELNSLSKAGLPPPFNVLLVCYSLFER 353
+VL NW E W PS + Y G R A +++ K FNVL+ Y L R
Sbjct: 462 AVLPNWVNEFATWVPSIAAFLYDGRLEERKAIREKIAGEGK------FNVLITHYDLIMR 515
Query: 354 HRFFSLYNIANYVTLLN 370
+ F L I Y +++
Sbjct: 516 DKAF-LKKIEWYYMIVD 531
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 232 FQPLLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLI 291
+ LL PYQL G+NFL + K ILADEMGLGKTIQ+I L L + PHL+
Sbjct: 269 LKGLLHPYQLEGLNFLRFSWSKQ-THVILADEMGLGKTIQSIALLASL--FEENLIPHLV 325
Query: 292 GCPASVLENWKKELKRWCPSFSILQYHGAARA 323
P S L NW++E W P +++ Y G A+A
Sbjct: 326 IAPLSTLRNWEREFATWAPQMNVVMYFGTAQA 357
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 236 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCPA 295
L YQL G+NFL + K ILADEMGLGKTIQ+I +L L + PHL+ P
Sbjct: 184 LHTYQLEGLNFLRYSWSKK-TNVILADEMGLGKTIQSIAFLASL--FEENLSPHLVVAPL 240
Query: 296 SVLENWKKELKRWCPSFSILQYHGAARAA-YCKELNSLSKAGLPPPFNVLLVCYSL 350
S + NW++E W P +++ Y G + A E G F+VLL Y +
Sbjct: 241 STIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEGRKSKFDVLLTTYEM 296
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 236 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCPA 295
L YQL G+NFL + K ILADEMGLGKTIQ+I +L L + PHL+ P
Sbjct: 225 LHTYQLEGLNFLRYSWSKK-TNVILADEMGLGKTIQSIAFLASL--FEENLSPHLVVAPL 281
Query: 296 SVLENWKKELKRWCPSFSILQYHGAARAA-YCKELNSLSKAGLPPPFNVLLVCYSL 350
S + NW++E W P +++ Y G + A E G F+VLL Y +
Sbjct: 282 STIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEGRKSKFDVLLTTYEM 337
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 79.0 bits (193), Expect = 5e-15, Method: Composition-based stats.
Identities = 50/122 (40%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 236 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCPA 295
L+ YQ+ G+ +L+ LY + G ILADEMGLGKT+Q I+ + L ND GP L+ P+
Sbjct: 754 LREYQMNGLRWLVSLYNNHLNG-ILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPS 812
Query: 296 SVLENWKKELKRWCPSFSILQYHGAA--RAAYCKELNSLSKAGLPPPFNVLLVCYS-LFE 352
SVL W+ E+ W PS + Y G R KE K FNVLL Y L
Sbjct: 813 SVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQK------FNVLLTTYEYLMN 866
Query: 353 RH 354
+H
Sbjct: 867 KH 868
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 79.0 bits (193), Expect = 5e-15, Method: Composition-based stats.
Identities = 50/122 (40%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 236 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCPA 295
L+ YQ+ G+ +L+ LY + G ILADEMGLGKT+Q I+ + L ND GP L+ P+
Sbjct: 754 LREYQMNGLRWLVSLYNNHLNG-ILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPS 812
Query: 296 SVLENWKKELKRWCPSFSILQYHGAA--RAAYCKELNSLSKAGLPPPFNVLLVCYS-LFE 352
SVL W+ E+ W PS + Y G R KE K FNVLL Y L
Sbjct: 813 SVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQK------FNVLLTTYEYLMN 866
Query: 353 RH 354
+H
Sbjct: 867 KH 868
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 79.0 bits (193), Expect = 5e-15, Method: Composition-based stats.
Identities = 50/122 (40%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 236 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCPA 295
L+ YQ+ G+ +L+ LY + G ILADEMGLGKT+Q I+ + L ND GP L+ P+
Sbjct: 754 LREYQMNGLRWLVSLYNNHLNG-ILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPS 812
Query: 296 SVLENWKKELKRWCPSFSILQYHGAA--RAAYCKELNSLSKAGLPPPFNVLLVCYS-LFE 352
SVL W+ E+ W PS + Y G R KE K FNVLL Y L
Sbjct: 813 SVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQK------FNVLLTTYEYLMN 866
Query: 353 RH 354
+H
Sbjct: 867 KH 868
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 239 YQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKH----------LHNDSGP 288
+Q GV F+ LY K G IL D+MGLGKTIQ I +L + L +D GP
Sbjct: 142 HQREGVKFMYNLY-KNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCLLESDKGP 200
Query: 289 HLIGCPASVLENWKKELKRWCPSFSILQYHGAARAAYCKELNSLSKAGLPPPFNVLLV 346
LI CP+S++ NW+ E RW F + YHG+ R ++L + L F+ +
Sbjct: 201 VLIICPSSIIHNWESEFSRWASFFKVSVYHGSNRDMILEKLKARGVEVLVTSFDTFRI 258
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 239 YQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCPASVL 298
YQ VGV +L L+ + AG I+ DEMGLGKTIQ +++L L H P +I CP ++L
Sbjct: 388 YQRVGVQWLWELHCQR-AGGIIGDEMGLGKTIQVLSFLGSL-HFSKMYKPSIIICPVTLL 445
Query: 299 ENWKKELKRWCPSFSILQYHGAAR 322
W++E ++W P F + H +A+
Sbjct: 446 RQWRREAQKWYPDFHVEILHDSAQ 469
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 239 YQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCPASVL 298
+QL +N+L + K ILADEMGLGKT+ A +L+ L + P L+ P S +
Sbjct: 692 HQLEALNWLRRCWHKS-KNVILADEMGLGKTVSASAFLSSLYFEFGVARPCLVLVPLSTM 750
Query: 299 ENWKKELKRWCPSFSILQYHGAARAA--------YCKELNSLSKAGLPPPFNVLLVCYSL 350
NW E W P ++++YHG+A+ + K +K FNVLL Y +
Sbjct: 751 PNWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKPTSYKFNVLLTTYEM 810
Query: 351 F 351
Sbjct: 811 V 811
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 236 LKPYQLVGVNFLL-----LLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPH- 289
L+P+Q GV F+ L I G ILAD+MGLGKT+Q+IT L L D P
Sbjct: 180 LRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMV 239
Query: 290 ---LIGCPASVLENWKKELKRWCPS-FSILQYHGAARAAYCKELNSLSKAGLPPPFNVLL 345
+I P S++ NW+ E+K+W ++ + R ++S ++ VL+
Sbjct: 240 KKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRP--RSALQVLI 297
Query: 346 VCYSLFERH 354
+ Y F H
Sbjct: 298 ISYETFRMH 306
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 236 LKPYQLVGVNFLL-----LLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPH- 289
L+P+Q GV F+ L I G ILAD+MGLGKT+Q+IT L L D P
Sbjct: 180 LRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMV 239
Query: 290 ---LIGCPASVLENWKKELKRWCPS-FSILQYHGAARAAYCKELNSLSKAGLPPPFNVLL 345
+I P S++ NW+ E+K+W ++ + R ++S ++ VL+
Sbjct: 240 KKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRP--RSALQVLI 297
Query: 346 VCYSLFERH 354
+ Y F H
Sbjct: 298 ISYETFRMH 306
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
Query: 253 KGIAGAILADEMGLGKTIQAITYLTLLKHLHN-----DSGPHLIGCPASVLENWKKELKR 307
+ +AG ILADEMG+GKTIQAI+ + + + +G L+ CP + W E+ R
Sbjct: 155 QSVAGGILADEMGMGKTIQAISLVLARREVDRAQFGEAAGCTLVLCPLVAVSQWLNEIAR 214
Query: 308 WCP--SFSILQYHGAARAAYCKELNSLSKAGLPPPFNVLLVCYSLFE 352
+ S +L YHGA RA KE + ++ +L YS E
Sbjct: 215 FTSPGSTKVLVYHGAKRAKNIKEFMN---------YDFVLTTYSTVE 252
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 212 RIVTQDDVD-----VACASEEEDSDFQPLLKPYQLVGVNFLLLLYRKGIAGAILADEMGL 266
++ DD D +A A+E+ PLLK YQ + + + + G ILADEMG+
Sbjct: 106 QMTEDDDFDEQNAVIAEAAEQPLDLIIPLLK-YQKEFLAWATIQELSAVRGGILADEMGM 164
Query: 267 GKTIQAITYLTLLKHLHNDSGPHLIG-----CPASVLENWKKELKRWCP--SFSILQYHG 319
GKTIQAI+ + + + +G P L W E+ R S +LQYHG
Sbjct: 165 GKTIQAISLVLARREVDRAKSREAVGHTLVLVPPVALSQWLDEISRLTSPGSTRVLQYHG 224
Query: 320 AARAAYCKEL 329
R ++L
Sbjct: 225 PKRDKNVQKL 234
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 17/105 (16%)
Query: 234 PLLKPYQLVGVNFLLLLYRKG--IAGAILADEMGLGKTIQAITYLTLLKHLHN------- 284
PL++ +Q + +N++ ++ G ILAD+ GLGKTI I+ L LL+ L +
Sbjct: 52 PLMR-HQKIALNWMRKKEKRSRHCLGGILADDQGLGKTISTIS-LILLQKLKSQSKQRKR 109
Query: 285 ---DSGPHLIGCPASVLENWKKELKRWCP---SFSILQYHGAARA 323
+SG LI CPASV++ W +E+K S+L +HG+ R
Sbjct: 110 KGQNSGGTLIVCPASVVKQWAREVKEKVSDEHKLSVLVHHGSHRT 154
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 236 LKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCPA 295
L P+QL G+ F L R+G +ADEMGLGKT+QAI + G L+ CPA
Sbjct: 204 LLPFQLDGLRFGL---RRG-GRCFIADEMGLGKTLQAIA----IAGCFISEGSILVVCPA 255
Query: 296 SVLENWKKELKRWCPS 311
+ W +EL+RW PS
Sbjct: 256 VLRFTWAEELERWLPS 271
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 236 LKPYQLVGVNFLLLLYRKGIA---------GAILADEMGLGKTIQAITYL-TLLKHLHND 285
LK +Q+ G+ F+ + I+ G ILA MGLGKT Q I +L T ++ +
Sbjct: 719 LKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLG 778
Query: 286 SGPHLIGCPASVLENWKKELKRWCPS 311
LI P +VL NW+ E ++W PS
Sbjct: 779 LKTALIVTPVNVLHNWRSEFEKWMPS 804
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 236 LKPYQLVGVNFLLLLYRKGIA---------GAILADEMGLGKTIQAITYL-TLLKHLHND 285
LK +Q+ G+ F+ + I+ G ILA MGLGKT Q I +L T ++ +
Sbjct: 719 LKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLG 778
Query: 286 SGPHLIGCPASVLENWKKELKRWCPS 311
LI P +VL NW+ E ++W PS
Sbjct: 779 LKTALIVTPVNVLHNWRSEFEKWMPS 804
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 236 LKPYQLVGVNFLLLLYRKGIA---------GAILADEMGLGKTIQAITYL-TLLKHLHND 285
LK +Q+ G+ F+ + I+ G ILA MGLGKT Q I +L T ++ +
Sbjct: 719 LKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLG 778
Query: 286 SGPHLIGCPASVLENWKKELKRWCPS 311
LI P +VL NW+ E ++W PS
Sbjct: 779 LKTALIVTPVNVLHNWRSEFEKWMPS 804
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 236 LKPYQLVGVNFLLLLYRKGIA---------GAILADEMGLGKTIQAITYL-TLLKHLHND 285
LK +Q+ G+ F+ + I+ G ILA MGLGKT Q I +L T ++ +
Sbjct: 719 LKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLG 778
Query: 286 SGPHLIGCPASVLENWKKELKRWCPS 311
LI P +VL NW+ E ++W PS
Sbjct: 779 LKTALIVTPVNVLHNWRSEFEKWMPS 804
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 235 LLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSGPHLIGCP 294
+L P+Q G+N+L L+ +G G IL D+MGLGKT+Q ++L L H L+ P
Sbjct: 376 MLYPHQREGLNWLWSLHTQG-KGGILGDDMGLGKTMQICSFLAGLFH-SKLIKRALVVAP 433
Query: 295 ASVLENWKKELKRWCPSFSILQYHGAARAAYCKELNSLSKAGLPPPFNVLLVCYSLF 351
++L +W KEL S +Y+G + A +L+ + + +LL Y +
Sbjct: 434 KTLLPHWMKELATVGLSQMTREYYGTSTKAREYDLHHILQGK-----GILLTTYDIV 485
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 20/134 (14%)
Query: 230 SDFQPLLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSG-- 287
++ + L+ YQ G+N+L L R + G IL D+MGLGKT+QA + S
Sbjct: 1476 TELKVQLRRYQQEGINWLGFLKRFKLHG-ILCDDMGLGKTLQASAIVASDAAERRGSTDE 1534
Query: 288 ----PHLIGCPASVLENWKKELKRWC--PSFSILQYHGAA--RAAYCKELNSLSKAGLPP 339
P +I CP++++ +W E++++ S+LQY G+A R + ++ N+
Sbjct: 1535 LDVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQFNN-------- 1586
Query: 340 PFNVLLVCYSLFER 353
NV++ Y + +
Sbjct: 1587 -HNVIITSYDVVRK 1599
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 20/134 (14%)
Query: 230 SDFQPLLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHNDSG-- 287
++ + L+ YQ G+N+L L R + G IL D+MGLGKT+QA + S
Sbjct: 1445 TELKVQLRRYQQEGINWLGFLKRFKLHG-ILCDDMGLGKTLQASAIVASDAAERRGSTDE 1503
Query: 288 ----PHLIGCPASVLENWKKELKRWC--PSFSILQYHGAA--RAAYCKELNSLSKAGLPP 339
P +I CP++++ +W E++++ S+LQY G+A R + ++ N+
Sbjct: 1504 LDVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQFNN-------- 1555
Query: 340 PFNVLLVCYSLFER 353
NV++ Y + +
Sbjct: 1556 -HNVIITSYDVVRK 1568
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18
| chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 226 EEEDSDFQPLLKPYQLVGVNFLLLLYRKGIAGAILADEMGLGKTIQAITYLTLLKHLHND 285
E+ S +P L P+Q G+ F+L + G +LADEMGLGKT+QAI T ++ +
Sbjct: 162 EKIPSHIEPKLLPFQREGIEFIL---QHG-GRVLLADEMGLGKTLQAIAVTTCVQ----E 213
Query: 286 SGPHLIGCPASVLENWKKELKRW 308
S P LI P+S+ +W + +W
Sbjct: 214 SWPVLIIAPSSLRLHWATMIHQW 236