Miyakogusa Predicted Gene

Lj0g3v0197519.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0197519.1 Non Chatacterized Hit- tr|F6GU18|F6GU18_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,63.18,0,ZINC
FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN,NULL; CALCIUM-ACTIVATED
CHLORIDE CHANNEL REGULAT,CUFF.12509.1
         (258 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G60710.1 | Symbols:  | Zinc finger (C3HC4-type RING finger) f...   238   2e-63
AT2G38970.1 | Symbols:  | Zinc finger (C3HC4-type RING finger) f...   224   4e-59
AT1G08050.1 | Symbols:  | Zinc finger (C3HC4-type RING finger) f...   203   7e-53
AT3G54780.1 | Symbols:  | Zinc finger (C3HC4-type RING finger) f...   201   5e-52
AT3G54780.2 | Symbols:  | Zinc finger (C3HC4-type RING finger) f...   201   5e-52
AT3G54780.3 | Symbols:  | Zinc finger (C3HC4-type RING finger) f...   201   6e-52
AT5G49665.1 | Symbols:  | Zinc finger (C3HC4-type RING finger) f...    73   2e-13
AT4G37890.1 | Symbols: EDA40 | Zinc finger (C3HC4-type RING fing...    55   4e-08
AT4G37890.2 | Symbols: EDA40 | Zinc finger (C3HC4-type RING fing...    55   4e-08
AT2G22680.1 | Symbols:  | Zinc finger (C3HC4-type RING finger) f...    51   8e-07
AT5G65683.1 | Symbols:  | Zinc finger (C3HC4-type RING finger) f...    50   1e-06

>AT5G60710.1 | Symbols:  | Zinc finger (C3HC4-type RING finger)
           family protein | chr5:24410953-24414849 REVERSE
           LENGTH=704
          Length = 704

 Score =  238 bits (608), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 129/237 (54%), Positives = 164/237 (69%), Gaps = 4/237 (1%)

Query: 1   MSVVVQELQIEVRCFNPCLQLSSVKAGSYQTRLINNARMACIKVGDLYAEEERDFFITMN 60
           +SVVVQEL + + C +  L++ SVKAGSY+     N+R   I VGDLYAEEER+F + ++
Sbjct: 436 LSVVVQELCVTIECMHHLLRIGSVKAGSYRFDNGPNSRTGSIAVGDLYAEEERNFLVNLD 495

Query: 61  VP-ADDSSDEMSLLIVRGLYRDPTTKEMVGLDVTSEVKIQRPDIA--RGVAVSIEVDKQR 117
           +P  D  SD MSLL V+ +Y+DP TKE V L+ + EVKI RP +   R   VS+EVD+QR
Sbjct: 496 IPIVDGVSDVMSLLKVQCVYKDPVTKETVNLNNSGEVKILRPIVMTERRPVVSVEVDRQR 555

Query: 118 NRNLATEVMTEARVKAERGDFVAAVSTLESCQRALSETVSARAGDSLCVSLSAELKEMQE 177
            R  A E ++EARV AERGD   AVS LE+C+  L+E+VS RAGD LCV+L AELKEMQE
Sbjct: 556 IRLRAAEAISEARVLAERGDLTEAVSVLETCRGLLTESVSGRAGDQLCVTLCAELKEMQE 615

Query: 178 RMENRRIYEQSGRAYLLSGISSHSSQRAXX-XXXXXXXXXXYQTASQVDMITRSQTM 233
           RM +R++YE SGRAY+L+G+SSHS QRA             YQT S VDM+  SQTM
Sbjct: 616 RMASRQVYEASGRAYVLAGLSSHSWQRATARGDMSDSTTTSYQTQSMVDMVNLSQTM 672


>AT2G38970.1 | Symbols:  | Zinc finger (C3HC4-type RING finger)
           family protein | chr2:16274135-16276651 FORWARD
           LENGTH=692
          Length = 692

 Score =  224 bits (572), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 121/247 (48%), Positives = 164/247 (66%), Gaps = 8/247 (3%)

Query: 1   MSVVVQELQIEVRCFNPCLQLSSVKAGSYQTRLINNARMACIKVGDLYAEEERDFFITMN 60
           +SV VQEL++E+      + LSS+KAGSYQ+ +  + R  C+ +GDLYA+EERDF I++N
Sbjct: 438 LSVAVQELRLEIEGMCSDVHLSSIKAGSYQSLVSGDGRSGCVDIGDLYADEERDFLISVN 497

Query: 61  VPADDSSDEMSLLIVRGLYRDPTTKEMVGLDVTSEVKIQRPD-IARGVAVSIEVDKQRNR 119
           +P     +E  LL +R +Y+D  TKE+V L  +  +KIQRP+ + + V VSIEVD+QRNR
Sbjct: 498 IPPQKDGNETPLLKMRCVYKDLLTKEIVTLQ-SHMLKIQRPETVGQEVVVSIEVDRQRNR 556

Query: 120 NLATEVMTEARVKAERGDFVAAVSTLESCQRALSETVSARAGDSLCVSLSAELKEMQERM 179
            LA E M +AR  AER D  A V+ +++ + AL+ETVSA++GD  CV+L  ELKEMQERM
Sbjct: 557 FLAAEAMVKARALAEREDLAAGVTAIQNFRVALAETVSAKSGDGFCVALDRELKEMQERM 616

Query: 180 ENRRIYEQSGRAYLLSGISSHSSQRAXXXXX----XXXXXXXYQTASQVDMITRSQ--TM 233
            +R +YE SGRAY+LSG+SSHS QRA                YQT S V+M+ RSQ  + 
Sbjct: 617 ASRHVYEVSGRAYILSGLSSHSWQRATSRGESGDGSSFVQAYYQTPSMVEMLHRSQATSH 676

Query: 234 LMRTTQP 240
             R  QP
Sbjct: 677 HHRLIQP 683


>AT1G08050.1 | Symbols:  | Zinc finger (C3HC4-type RING finger)
           family protein | chr1:2499088-2501311 REVERSE LENGTH=641
          Length = 641

 Score =  203 bits (517), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 117/250 (46%), Positives = 165/250 (66%), Gaps = 11/250 (4%)

Query: 1   MSVVVQELQIEVRCFNP-CLQLSSVKAGSYQTRLINNARMACIKVGDLYAEEERDFFITM 59
           +SVV+ E  +E+ C +   L++SS+KAGSY++R+  +AR A I VGD+YAEEERDF + +
Sbjct: 385 LSVVILEQVVEIECIHEQGLKISSIKAGSYRSRIAPDARTATIDVGDMYAEEERDFLVLL 444

Query: 60  NVPADDS----SDEMSLLIVRGLYRDPTTKEMVGLDVTSEVKIQRPDIARGV-AVSIEVD 114
            +P  D+    S+ +SLL VR +Y+DP TKE+V ++ + E+ IQRP    G   VSIEVD
Sbjct: 445 EIPCCDNGSGESESLSLLKVRCVYKDPVTKEIVHVE-SGELSIQRPMKLTGKEVVSIEVD 503

Query: 115 KQRNRNLATEVMTEARVKAERGDFVAAVSTLESCQRALSETVSARAGDSLCVSLSAELKE 174
           +Q NR L ++ M+EARV A+ GD   AV  L + +R LSET SA++ D LC SLS+EL  
Sbjct: 504 RQLNRFLVSQAMSEARVLADGGDLSGAVGILRNRERELSETPSAQSSDRLCQSLSSELSA 563

Query: 175 MQERMENRRIYEQSGRAYLLSGISSHSSQRAXX---XXXXXXXXXXYQTASQVDMITRSQ 231
           +QERM +RR+Y  SGRAY  S +SSHS+QRA               YQT+    M+TRSQ
Sbjct: 564 LQERMTSRRMYRTSGRAYAFSSMSSHSAQRATARGDSTQGFSPVQAYQTSPMARMVTRSQ 623

Query: 232 TMLMRT-TQP 240
            +++ + T+P
Sbjct: 624 LLVLESPTKP 633


>AT3G54780.1 | Symbols:  | Zinc finger (C3HC4-type RING finger)
           family protein | chr3:20278985-20281429 FORWARD
           LENGTH=675
          Length = 675

 Score =  201 bits (511), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 110/254 (43%), Positives = 160/254 (62%), Gaps = 6/254 (2%)

Query: 1   MSVVVQELQIEVRCFNPCLQLSSVKAGSYQTRLINNARMACIKVGDLYAEEERDFFITMN 60
           +SV VQEL++E+   +P ++LSS+KAGSY + +  +     + +GDLYA+EERDF +++N
Sbjct: 417 LSVAVQELRVEIEGVSPNVRLSSIKAGSYSSLVTGDGHSGLVDLGDLYADEERDFLVSIN 476

Query: 61  VPADDSSDEMSLLIVRGLYRDPTTKEMVGLDVTSEVKIQRPD-IARGVAVSIEVDKQRNR 119
           +P ++      LL +R LY +P TKE+  L+ +  ++I+RP+ +A    V IEV +QRNR
Sbjct: 477 IPVEEDG-HTPLLKLRCLYINPLTKEITTLE-SHVLQIRRPEYVAEEKVVPIEVVRQRNR 534

Query: 120 NLATEVMTEARVKAERGDFVAAVSTLESCQRALSETVSARAGDSLCVSLSAELKEMQERM 179
            LA E M +AR  AE GD  AAV  +E+ +  L+ETV+A++ D  CV+L +ELKEMQ RM
Sbjct: 535 FLAAEAMAQARTLAEHGDLEAAVKAIENFRLVLAETVAAKSCDRFCVALDSELKEMQGRM 594

Query: 180 ENRRIYEQSGRAYLLSGISSHSSQRAXX---XXXXXXXXXXYQTASQVDMITRSQTMLMR 236
            +  +YE SGRAY+LSG+SSHS QRA               YQT S  +M+ RSQ M + 
Sbjct: 595 RSSHMYEASGRAYILSGLSSHSWQRATARGNSRDSSSFVQAYQTPSMAEMLRRSQAMFLV 654

Query: 237 TTQPGNSLPPSKSF 250
           +      + P  SF
Sbjct: 655 SPSHHRLIQPLLSF 668


>AT3G54780.2 | Symbols:  | Zinc finger (C3HC4-type RING finger)
           family protein | chr3:20278985-20281429 FORWARD
           LENGTH=632
          Length = 632

 Score =  201 bits (510), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 110/254 (43%), Positives = 160/254 (62%), Gaps = 6/254 (2%)

Query: 1   MSVVVQELQIEVRCFNPCLQLSSVKAGSYQTRLINNARMACIKVGDLYAEEERDFFITMN 60
           +SV VQEL++E+   +P ++LSS+KAGSY + +  +     + +GDLYA+EERDF +++N
Sbjct: 374 LSVAVQELRVEIEGVSPNVRLSSIKAGSYSSLVTGDGHSGLVDLGDLYADEERDFLVSIN 433

Query: 61  VPADDSSDEMSLLIVRGLYRDPTTKEMVGLDVTSEVKIQRPD-IARGVAVSIEVDKQRNR 119
           +P ++      LL +R LY +P TKE+  L+ +  ++I+RP+ +A    V IEV +QRNR
Sbjct: 434 IPVEEDG-HTPLLKLRCLYINPLTKEITTLE-SHVLQIRRPEYVAEEKVVPIEVVRQRNR 491

Query: 120 NLATEVMTEARVKAERGDFVAAVSTLESCQRALSETVSARAGDSLCVSLSAELKEMQERM 179
            LA E M +AR  AE GD  AAV  +E+ +  L+ETV+A++ D  CV+L +ELKEMQ RM
Sbjct: 492 FLAAEAMAQARTLAEHGDLEAAVKAIENFRLVLAETVAAKSCDRFCVALDSELKEMQGRM 551

Query: 180 ENRRIYEQSGRAYLLSGISSHSSQRAXX---XXXXXXXXXXYQTASQVDMITRSQTMLMR 236
            +  +YE SGRAY+LSG+SSHS QRA               YQT S  +M+ RSQ M + 
Sbjct: 552 RSSHMYEASGRAYILSGLSSHSWQRATARGNSRDSSSFVQAYQTPSMAEMLRRSQAMFLV 611

Query: 237 TTQPGNSLPPSKSF 250
           +      + P  SF
Sbjct: 612 SPSHHRLIQPLLSF 625


>AT3G54780.3 | Symbols:  | Zinc finger (C3HC4-type RING finger)
           family protein | chr3:20278985-20281429 FORWARD
           LENGTH=633
          Length = 633

 Score =  201 bits (510), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 110/254 (43%), Positives = 160/254 (62%), Gaps = 6/254 (2%)

Query: 1   MSVVVQELQIEVRCFNPCLQLSSVKAGSYQTRLINNARMACIKVGDLYAEEERDFFITMN 60
           +SV VQEL++E+   +P ++LSS+KAGSY + +  +     + +GDLYA+EERDF +++N
Sbjct: 375 LSVAVQELRVEIEGVSPNVRLSSIKAGSYSSLVTGDGHSGLVDLGDLYADEERDFLVSIN 434

Query: 61  VPADDSSDEMSLLIVRGLYRDPTTKEMVGLDVTSEVKIQRPD-IARGVAVSIEVDKQRNR 119
           +P ++      LL +R LY +P TKE+  L+ +  ++I+RP+ +A    V IEV +QRNR
Sbjct: 435 IPVEEDG-HTPLLKLRCLYINPLTKEITTLE-SHVLQIRRPEYVAEEKVVPIEVVRQRNR 492

Query: 120 NLATEVMTEARVKAERGDFVAAVSTLESCQRALSETVSARAGDSLCVSLSAELKEMQERM 179
            LA E M +AR  AE GD  AAV  +E+ +  L+ETV+A++ D  CV+L +ELKEMQ RM
Sbjct: 493 FLAAEAMAQARTLAEHGDLEAAVKAIENFRLVLAETVAAKSCDRFCVALDSELKEMQGRM 552

Query: 180 ENRRIYEQSGRAYLLSGISSHSSQRAXX---XXXXXXXXXXYQTASQVDMITRSQTMLMR 236
            +  +YE SGRAY+LSG+SSHS QRA               YQT S  +M+ RSQ M + 
Sbjct: 553 RSSHMYEASGRAYILSGLSSHSWQRATARGNSRDSSSFVQAYQTPSMAEMLRRSQAMFLV 612

Query: 237 TTQPGNSLPPSKSF 250
           +      + P  SF
Sbjct: 613 SPSHHRLIQPLLSF 626


>AT5G49665.1 | Symbols:  | Zinc finger (C3HC4-type RING finger)
           family protein | chr5:20167119-20169420 REVERSE
           LENGTH=740
          Length = 740

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 106/182 (58%), Gaps = 13/182 (7%)

Query: 1   MSVVVQELQIEVRCFN---PCLQLSSVKAGSYQTRLINNARMACIKVGDLYAEEERDFFI 57
           +SVVVQ+L+I++R  +   PC ++S++   + +  L+++     +++GDLYA EER+  +
Sbjct: 497 LSVVVQDLRIQIRVGSGSGPC-EISAIYLCNGRPTLVSSGS-GSVRLGDLYAGEERELLV 554

Query: 58  TMNVPADDSSDEMSLLIVRGLYRDPTTKEMV-GLDVTSEVKIQRPDIARGVAVSIEVDKQ 116
            + VP+  ++    +L VRGL++DP+T+E+V G D +  V    P   R  + S  +++ 
Sbjct: 555 ELRVPS-TATRAYQILSVRGLFKDPSTQEVVYGRDQSLRV----PQAVRS-SSSPRIERL 608

Query: 117 RNRNLATEVMTEARVKAERGDFVAAVSTLESCQRALSETVSARAGDSLCVSLSAELKEMQ 176
           R+  +AT  + E+R   E G+  +A   L S +  L ++ +  A + + V + AEL E+Q
Sbjct: 609 RSLFIATRAVAESRRLVEYGECTSAYHLLTSARALLGQSGTVEAAEYIKV-VEAELVEVQ 667

Query: 177 ER 178
            R
Sbjct: 668 WR 669


>AT4G37890.1 | Symbols: EDA40 | Zinc finger (C3HC4-type RING finger)
           family protein | chr4:17812812-17815031 REVERSE
           LENGTH=739
          Length = 739

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 7/147 (4%)

Query: 42  IKVGDLYAEEERDFFITMNVPADDSSDEMSLLIVRGLYRDPTTKEMVGLDVTSEVKIQRP 101
           I++GD+Y +EER+  + +  P+  SS    ++ VR  + DPTT+E+   +    + I RP
Sbjct: 553 IRLGDMYGDEEREVLVELKSPS--SSRSQRIMTVRSRHVDPTTQEIKNYE-DRALMIPRP 609

Query: 102 DIARGVAVSIEVDKQRNRNLATEVMTEARVKAERGDFVAAVSTLESCQRALSETVSARAG 161
              R    SI   + RN +++T  + E+R   E  D+  A   L S  RAL       + 
Sbjct: 610 TTVRSSDPSIA--RLRNLHVSTRAVAESRRLVEVNDYSGAERMLTSA-RALLVQYGLSSS 666

Query: 162 DSLCVSLSAELKEMQERMENRRIYEQS 188
           DS    L AEL ++  R+  R +  +S
Sbjct: 667 DSCLRGLEAELADLN-RLRGRHVAVKS 692


>AT4G37890.2 | Symbols: EDA40 | Zinc finger (C3HC4-type RING finger)
           family protein | chr4:17812812-17815031 REVERSE
           LENGTH=711
          Length = 711

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 7/147 (4%)

Query: 42  IKVGDLYAEEERDFFITMNVPADDSSDEMSLLIVRGLYRDPTTKEMVGLDVTSEVKIQRP 101
           I++GD+Y +EER+  + +  P+  SS    ++ VR  + DPTT+E+   +    + I RP
Sbjct: 525 IRLGDMYGDEEREVLVELKSPS--SSRSQRIMTVRSRHVDPTTQEIKNYE-DRALMIPRP 581

Query: 102 DIARGVAVSIEVDKQRNRNLATEVMTEARVKAERGDFVAAVSTLESCQRALSETVSARAG 161
              R    SI   + RN +++T  + E+R   E  D+  A   L S  RAL       + 
Sbjct: 582 TTVRSSDPSIA--RLRNLHVSTRAVAESRRLVEVNDYSGAERMLTSA-RALLVQYGLSSS 638

Query: 162 DSLCVSLSAELKEMQERMENRRIYEQS 188
           DS    L AEL ++  R+  R +  +S
Sbjct: 639 DSCLRGLEAELADLN-RLRGRHVAVKS 664


>AT2G22680.1 | Symbols:  | Zinc finger (C3HC4-type RING finger)
           family protein | chr2:9645433-9647484 FORWARD LENGTH=683
          Length = 683

 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 6/138 (4%)

Query: 42  IKVGDLYAEEERDFFITMNVPADDS---SDEMSLLIVRGLYRDPTTKEMVGLDVTSEVKI 98
           I++GD+YAEEER   + +  P ++S   S    ++ VR  Y DPTT+E+   +    + I
Sbjct: 497 IRLGDMYAEEERALLVEIKSPVNNSLTGSRSHKIMTVRSRYVDPTTQELRNPE-DRALLI 555

Query: 99  QRPDIARGVAVSIEVDKQRNRNLATEVMTEARVKAERGDFVAAVSTLESCQRALSETVSA 158
             P   R  + +  + + RN +++T  + E+R   ER  +  A   L S  RAL      
Sbjct: 556 PTPLTVRS-SSNPNISRLRNLHVSTRAVAESRRLIERNHYSGAHRLLTSA-RALLVQHGL 613

Query: 159 RAGDSLCVSLSAELKEMQ 176
            + D+    L AE+ ++ 
Sbjct: 614 SSSDACIRGLDAEIADLN 631


>AT5G65683.1 | Symbols:  | Zinc finger (C3HC4-type RING finger)
           family protein | chr5:26261472-26263704 FORWARD
           LENGTH=717
          Length = 717

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 11/156 (7%)

Query: 20  QLSSVKAGSYQTRLINNARMACIKVGDLYAEEERDFFITMNVPADDSSDEMSLLIVRGLY 79
           ++SSV   S   RL N    + I+VGDL+AEEER+F + + VP   SS    ++ V+   
Sbjct: 517 EISSVY--SLTGRLENFGSGSVIQVGDLFAEEEREFLVELKVPT-SSSGSHQVMSVQSSI 573

Query: 80  RDPTTKEMVGLDVTSEVKIQRPDIARGVAVSIEVDKQRNRNLATEVMTEARVKAERGDFV 139
            D  T + +         I RP   R V+ SIE  + RN +     + ++R   ER D  
Sbjct: 574 VDQMTHQPMTCPKEKRFLIPRPQSVRYVSSSIE--RLRNLHSMCRAVADSRRLIEREDLS 631

Query: 140 AAVSTLESCQRALSETVSARAGDSLCVSLSAELKEM 175
            A   L + +     + ++ + DSL  SL  EL E+
Sbjct: 632 GAYQVLTTAR-----SNASHSDDSL-RSLEVELNEL 661