Miyakogusa Predicted Gene

Lj0g3v0197239.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0197239.1 tr|G7J2M9|G7J2M9_MEDTR Octicosapeptide/Phox/Bem1p
domain-containing protein OS=Medicago truncatula
G,48.48,0.0000000000001,no description,Aldolase-type TIM barrel;
CBS,Cystathionine beta-synthase, core; OS12G0169400
PROTEIN,CUFF.12487.1
         (167 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G52950.2 | Symbols:  | CBS / octicosapeptide/Phox/Bemp1 (PB1)...   270   3e-73
AT3G52950.1 | Symbols:  | CBS / octicosapeptide/Phox/Bemp1 (PB1)...   270   3e-73
AT2G36500.1 | Symbols:  | CBS / octicosapeptide/Phox/Bemp1 (PB1)...   249   4e-67
AT5G50530.1 | Symbols:  | CBS / octicosapeptide/Phox/Bemp1 (PB1)...   191   3e-49
AT5G50640.1 | Symbols:  | CBS / octicosapeptide/Phox/Bemp1 (PB1)...   191   3e-49
AT5G63490.1 | Symbols:  | CBS / octicosapeptide/Phox/Bemp1 (PB1)...   186   4e-48
AT5G10860.1 | Symbols:  | Cystathionine beta-synthase (CBS) fami...    52   2e-07

>AT3G52950.2 | Symbols:  | CBS / octicosapeptide/Phox/Bemp1 (PB1)
           domains-containing protein | chr3:19634866-19636536
           FORWARD LENGTH=556
          Length = 556

 Score =  270 bits (690), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 130/167 (77%), Positives = 146/167 (87%), Gaps = 2/167 (1%)

Query: 1   MEKAAEQGSAIAAAVEGAERQRGSNASAPNALIETLRERMFKPTLSTIIGDNTKAAIASA 60
           MEKAAEQGSA+AAAVEG E+Q GS  SAP A IETLRERMFKP LSTII DN+K A+ + 
Sbjct: 187 MEKAAEQGSALAAAVEGVEKQWGSGYSAPYAFIETLRERMFKPALSTIITDNSKVALVAP 246

Query: 61  ADPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTP 120
           +DPV VAAK+M++LRVNS +I +  G KI GILTSKDILMRVVAQNLSPELTLVEKVMTP
Sbjct: 247 SDPVSVAAKRMRDLRVNSVIIST--GNKISGILTSKDILMRVVAQNLSPELTLVEKVMTP 304

Query: 121 NPECATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITHA 167
           NPECA+L+TTILDALH MHDGKFLHLP++D+DG  AACVDVLQITHA
Sbjct: 305 NPECASLETTILDALHTMHDGKFLHLPIIDKDGSAAACVDVLQITHA 351



 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 2/103 (1%)

Query: 64  VYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPE 123
           V+ A ++M   RV+ A +++ S   + GI+T KD+  RV+A+ L P+ TLV KVMT NP 
Sbjct: 81  VFDACRRMAARRVD-ACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRNPI 139

Query: 124 CATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITH 166
             T D+  L+AL  M  GKF HLPVV+ +G V A +D+ +  +
Sbjct: 140 FVTSDSLALEALQKMVQGKFRHLPVVE-NGEVIALLDITKCLY 181


>AT3G52950.1 | Symbols:  | CBS / octicosapeptide/Phox/Bemp1 (PB1)
           domains-containing protein | chr3:19634866-19636536
           FORWARD LENGTH=556
          Length = 556

 Score =  270 bits (690), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 130/167 (77%), Positives = 146/167 (87%), Gaps = 2/167 (1%)

Query: 1   MEKAAEQGSAIAAAVEGAERQRGSNASAPNALIETLRERMFKPTLSTIIGDNTKAAIASA 60
           MEKAAEQGSA+AAAVEG E+Q GS  SAP A IETLRERMFKP LSTII DN+K A+ + 
Sbjct: 187 MEKAAEQGSALAAAVEGVEKQWGSGYSAPYAFIETLRERMFKPALSTIITDNSKVALVAP 246

Query: 61  ADPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTP 120
           +DPV VAAK+M++LRVNS +I +  G KI GILTSKDILMRVVAQNLSPELTLVEKVMTP
Sbjct: 247 SDPVSVAAKRMRDLRVNSVIIST--GNKISGILTSKDILMRVVAQNLSPELTLVEKVMTP 304

Query: 121 NPECATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITHA 167
           NPECA+L+TTILDALH MHDGKFLHLP++D+DG  AACVDVLQITHA
Sbjct: 305 NPECASLETTILDALHTMHDGKFLHLPIIDKDGSAAACVDVLQITHA 351



 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 2/103 (1%)

Query: 64  VYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPE 123
           V+ A ++M   RV+ A +++ S   + GI+T KD+  RV+A+ L P+ TLV KVMT NP 
Sbjct: 81  VFDACRRMAARRVD-ACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRNPI 139

Query: 124 CATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITH 166
             T D+  L+AL  M  GKF HLPVV+ +G V A +D+ +  +
Sbjct: 140 FVTSDSLALEALQKMVQGKFRHLPVVE-NGEVIALLDITKCLY 181


>AT2G36500.1 | Symbols:  | CBS / octicosapeptide/Phox/Bemp1 (PB1)
           domains-containing protein | chr2:15318473-15320083
           FORWARD LENGTH=536
          Length = 536

 Score =  249 bits (637), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 123/167 (73%), Positives = 141/167 (84%), Gaps = 7/167 (4%)

Query: 1   MEKAAEQGSAIAAAVEGAERQRGSNASAPNALIETLRERMFKPTLSTIIGDNTKAAIASA 60
           MEKAAEQGSA+A AVE  ER  GS   A    I+TLRERMFKP LSTI+ +NTK A+ SA
Sbjct: 185 MEKAAEQGSALATAVE--ERHWGSGNFA---FIDTLRERMFKPALSTIVTENTKVALVSA 239

Query: 61  ADPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTP 120
           +DPV+VA+KKM++LRVNS +I    G KI GILTSKDILMRVVAQNLSPELTLVEKVMTP
Sbjct: 240 SDPVFVASKKMRDLRVNSVIIAV--GNKIHGILTSKDILMRVVAQNLSPELTLVEKVMTP 297

Query: 121 NPECATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITHA 167
           NPECA+++TTILDALH+MHDGKFLHLPV D+DG+  AC+DVLQITHA
Sbjct: 298 NPECASIETTILDALHIMHDGKFLHLPVFDKDGFAVACLDVLQITHA 344



 Score = 80.1 bits (196), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 70/114 (61%), Gaps = 2/114 (1%)

Query: 53  TKAAIASAADPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELT 112
           +KA   +    V+ A ++M   RV+ AV+++ S   + GI+T KDI  RV+A+ L PE T
Sbjct: 68  SKALTINEGTTVFDACRRMAARRVD-AVLLTDSSALLSGIVTDKDIATRVIAEGLRPEHT 126

Query: 113 LVEKVMTPNPECATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITH 166
           LV KVMT NP   T D+  ++AL  M  GKF HLPVV+ +G V A +D+ +  +
Sbjct: 127 LVSKVMTRNPIFVTSDSLAIEALQKMVQGKFRHLPVVE-NGEVIALLDITKCLY 179


>AT5G50530.1 | Symbols:  | CBS / octicosapeptide/Phox/Bemp1 (PB1)
           domains-containing protein | chr5:20571876-20574922
           REVERSE LENGTH=548
          Length = 548

 Score =  191 bits (484), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 94/167 (56%), Positives = 124/167 (74%), Gaps = 2/167 (1%)

Query: 1   MEKAAEQGSAIAAAVEGAERQRGSNASAPNALIETLRERMFKPTLSTIIGDNTKAAIASA 60
           ME++ E+G AIAAAVEG E+  G++ + PN  +ETLRER+FKP+LSTII +NTK      
Sbjct: 186 MERSVEKGKAIAAAVEGVEKNWGTSIAGPNTFMETLRERIFKPSLSTIIPENTKVLKVGL 245

Query: 61  ADPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTP 120
            + V     KM E + ++A++  +   K+ GILTSKDILMRV++QNL  E T VEKVMTP
Sbjct: 246 DETVLGVTMKMVEYQSSAAMV--MVENKLVGILTSKDILMRVISQNLPQETTTVEKVMTP 303

Query: 121 NPECATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITHA 167
           NPE AT+D  I++ALH+MH+GKFLHLPV+D+DG V A +DV+ ITHA
Sbjct: 304 NPESATVDMAIVEALHIMHNGKFLHLPVLDKDGDVVAVIDVIHITHA 350



 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 65/108 (60%), Gaps = 2/108 (1%)

Query: 54  KAAIASAADPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTL 113
           KA     +  ++ A ++M   RV+ A++++ S   + GILT +DI  +V+A+ L+ E T 
Sbjct: 70  KALTVPDSTTLFEACRRMAARRVD-ALLLTDSNALLCGILTDRDIATKVIAKQLNLEETP 128

Query: 114 VEKVMTPNPECATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDV 161
           V KVMT NP     DT  ++AL  M  GKF HLPVV+ +G V A +D+
Sbjct: 129 VSKVMTKNPVFVLSDTIAVEALQKMVQGKFRHLPVVE-NGEVIALLDI 175


>AT5G50640.1 | Symbols:  | CBS / octicosapeptide/Phox/Bemp1 (PB1)
           domains-containing protein | chr5:20605218-20608264
           REVERSE LENGTH=548
          Length = 548

 Score =  191 bits (484), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 94/167 (56%), Positives = 124/167 (74%), Gaps = 2/167 (1%)

Query: 1   MEKAAEQGSAIAAAVEGAERQRGSNASAPNALIETLRERMFKPTLSTIIGDNTKAAIASA 60
           ME++ E+G AIAAAVEG E+  G++ + PN  +ETLRER+FKP+LSTII +NTK      
Sbjct: 186 MERSVEKGKAIAAAVEGVEKNWGTSIAGPNTFMETLRERIFKPSLSTIIPENTKVLKVGL 245

Query: 61  ADPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTP 120
            + V     KM E + ++A++  +   K+ GILTSKDILMRV++QNL  E T VEKVMTP
Sbjct: 246 DETVLGVTMKMVEYQSSAAMV--MVENKLVGILTSKDILMRVISQNLPQETTTVEKVMTP 303

Query: 121 NPECATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITHA 167
           NPE AT+D  I++ALH+MH+GKFLHLPV+D+DG V A +DV+ ITHA
Sbjct: 304 NPESATVDMAIVEALHIMHNGKFLHLPVLDKDGDVVAVIDVIHITHA 350



 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 65/108 (60%), Gaps = 2/108 (1%)

Query: 54  KAAIASAADPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTL 113
           KA     +  ++ A ++M   RV+ A++++ S   + GILT +DI  +V+A+ L+ E T 
Sbjct: 70  KALTVPDSTTLFEACRRMAARRVD-ALLLTDSNALLCGILTDRDIATKVIAKQLNLEETP 128

Query: 114 VEKVMTPNPECATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDV 161
           V KVMT NP     DT  ++AL  M  GKF HLPVV+ +G V A +D+
Sbjct: 129 VSKVMTKNPVFVLSDTIAVEALQKMVQGKFRHLPVVE-NGEVIALLDI 175


>AT5G63490.1 | Symbols:  | CBS / octicosapeptide/Phox/Bemp1 (PB1)
           domains-containing protein | chr5:25418716-25421970
           REVERSE LENGTH=543
          Length = 543

 Score =  186 bits (473), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 92/153 (60%), Positives = 114/153 (74%), Gaps = 2/153 (1%)

Query: 1   MEKAAEQGSAIAAAVEGAERQRGSNASAPNALIETLRERMFKPTLSTIIGDNTKAAIASA 60
           ME+AAE+G AIAAAVEG E+  G+N S PN  IETLR+RMF+P+LSTII D+TK    S 
Sbjct: 178 MERAAEKGKAIAAAVEGVEKSWGTNTSVPNTFIETLRDRMFRPSLSTIIPDDTKVLKVSP 237

Query: 61  ADPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTP 120
            D V   AKKM E + + AV++     K++GI TSKDILMRVVA+NL P  TLVE VMT 
Sbjct: 238 TDTVLTVAKKMVEFQSSCAVVII--EDKLRGIFTSKDILMRVVAENLPPSETLVETVMTQ 295

Query: 121 NPECATLDTTILDALHMMHDGKFLHLPVVDRDG 153
           NPE   +DT I++ALH+MH+GKFLHLPV D++G
Sbjct: 296 NPESTIVDTPIVEALHIMHEGKFLHLPVTDKEG 328



 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 2/109 (1%)

Query: 53  TKAAIASAADPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELT 112
           +KA    A   +Y A K+M   RV+ A++++ S   + GILT KDI  RV++Q L+ E T
Sbjct: 61  SKALTVPATTTIYEACKRMASRRVD-ALLLTDSNEMLCGILTDKDIATRVISQELNVEET 119

Query: 113 LVEKVMTPNPECATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDV 161
            V KVMT NP     +T  ++AL  M  GKF HLPVV+ +G V A +D+
Sbjct: 120 PVSKVMTKNPMFVLSETLAVEALQKMVQGKFRHLPVVE-NGEVIALLDI 167


>AT5G10860.1 | Symbols:  | Cystathionine beta-synthase (CBS) family
           protein | chr5:3429173-3430142 REVERSE LENGTH=206
          Length = 206

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 8/121 (6%)

Query: 44  TLSTIIGDNTKAAIAS-----AADPVYVAAKKMQELRVNSAVIVSLSGTK-IQGILTSKD 97
           T+S ++    K+A  S       D VY A K M +  V + V+V     + + GI+T +D
Sbjct: 56  TISDVMKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERD 115

Query: 98  ILMRVVAQNLSPELTLVEKVMTPNPECATL--DTTILDALHMMHDGKFLHLPVVDRDGYV 155
            L +++ Q  S + T V  +MT   +  T+  +T +L A+ +M D +  H+PV+   G +
Sbjct: 116 YLRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMI 175

Query: 156 A 156
            
Sbjct: 176 G 176