Miyakogusa Predicted Gene

Lj0g3v0196829.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0196829.2 tr|Q93X14|Q93X14_VICFA Amino acid permease AAP3
OS=Vicia faba var. minor GN=aap3 PE=2
SV=1,75.44,8.40779e-45,Aa_trans,Amino acid transporter, transmembrane;
AMINO ACID TRANSPORTER,NULL,CUFF.12490.2
         (114 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G09220.1 | Symbols: AAP2 | amino acid permease 2 | chr5:28668...   140   2e-34
AT5G63850.1 | Symbols: AAP4 | amino acid permease 4 | chr5:25551...   126   3e-30
AT1G77380.1 | Symbols: AAP3, ATAAP3 | amino acid permease 3 | ch...   125   4e-30
AT1G44100.1 | Symbols: AAP5 | amino acid permease 5 | chr1:16764...   124   9e-30
AT5G49630.1 | Symbols: AAP6 | amino acid permease 6 | chr5:20142...   114   1e-26
AT1G10010.1 | Symbols: AAP8, ATAAP8 | amino acid permease 8 | ch...   113   2e-26
AT1G58360.1 | Symbols: AAP1, NAT2 | amino acid permease 1 | chr1...   110   1e-25
AT5G23810.2 | Symbols: AAP7 | amino acid permease 7 | chr5:80284...    82   6e-17
AT5G23810.1 | Symbols: AAP7 | amino acid permease 7 | chr5:80284...    82   8e-17
AT5G40780.2 | Symbols:  | lysine histidine transporter 1 | chr5:...    48   2e-06
AT5G40780.1 | Symbols: LHT1 | lysine histidine transporter 1 | c...    48   2e-06
AT1G48640.1 | Symbols:  | Transmembrane amino acid transporter f...    47   4e-06

>AT5G09220.1 | Symbols: AAP2 | amino acid permease 2 |
           chr5:2866867-2868863 FORWARD LENGTH=493
          Length = 493

 Score =  140 bits (352), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 63/91 (69%), Positives = 77/91 (84%)

Query: 24  DGVPIQTDSKFYDDDGRLKRTGNVWTTSSHIITAVVGSGVLSLAWSIAQMGWIAGPGVMI 83
           D VP Q   K +DDDGRLKRTG VWT S+HIITAV+GSGVLSLAW+IAQ+GWIAGP VM+
Sbjct: 27  DFVPPQPAFKCFDDDGRLKRTGTVWTASAHIITAVIGSGVLSLAWAIAQLGWIAGPAVML 86

Query: 84  FFSVVALYTSSILAECYRCGDSHFGKRNYTF 114
            FS+V LY+S++L++CYR GD+  GKRNYT+
Sbjct: 87  LFSLVTLYSSTLLSDCYRTGDAVSGKRNYTY 117


>AT5G63850.1 | Symbols: AAP4 | amino acid permease 4 |
           chr5:25551494-25553374 FORWARD LENGTH=466
          Length = 466

 Score =  126 bits (316), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 56/82 (68%), Positives = 69/82 (84%)

Query: 33  KFYDDDGRLKRTGNVWTTSSHIITAVVGSGVLSLAWSIAQMGWIAGPGVMIFFSVVALYT 92
           K +DDDGRLKR+G VWT S+HIITAV+GSGVLSLAW+I Q+GWIAGP VM+ FS V  Y+
Sbjct: 9   KCFDDDGRLKRSGTVWTASAHIITAVIGSGVLSLAWAIGQLGWIAGPTVMLLFSFVTYYS 68

Query: 93  SSILAECYRCGDSHFGKRNYTF 114
           S++L++CYR GD   GKRNYT+
Sbjct: 69  STLLSDCYRTGDPVSGKRNYTY 90


>AT1G77380.1 | Symbols: AAP3, ATAAP3 | amino acid permease 3 |
           chr1:29075201-29077252 REVERSE LENGTH=476
          Length = 476

 Score =  125 bits (315), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 60/93 (64%), Positives = 74/93 (79%), Gaps = 1/93 (1%)

Query: 22  AIDGVPIQTDSKFYDDDGRLKRTGNVWTTSSHIITAVVGSGVLSLAWSIAQMGWIAGPGV 81
           A+D +P    SK+ DDDG+ KRTG+VWT S+HIITAV+GSGVLSLAW+ AQ+GW+AGP V
Sbjct: 10  AVD-MPQTGGSKYLDDDGKNKRTGSVWTASAHIITAVIGSGVLSLAWATAQLGWLAGPVV 68

Query: 82  MIFFSVVALYTSSILAECYRCGDSHFGKRNYTF 114
           M+ FS V  +TSS+LA CYR GD   GKRNYT+
Sbjct: 69  MLLFSAVTYFTSSLLAACYRSGDPISGKRNYTY 101


>AT1G44100.1 | Symbols: AAP5 | amino acid permease 5 |
           chr1:16764651-16767223 REVERSE LENGTH=480
          Length = 480

 Score =  124 bits (312), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 58/94 (61%), Positives = 71/94 (75%), Gaps = 1/94 (1%)

Query: 21  EAIDGVPIQTDSKFYDDDGRLKRTGNVWTTSSHIITAVVGSGVLSLAWSIAQMGWIAGPG 80
           + +D +P  +   F DDDGR KRTG VWT S+HIITAV+GSGVLSLAW++AQ+GWI GP 
Sbjct: 7   QDLDVLPKHSSDSF-DDDGRPKRTGTVWTASAHIITAVIGSGVLSLAWAVAQIGWIGGPV 65

Query: 81  VMIFFSVVALYTSSILAECYRCGDSHFGKRNYTF 114
            M+ FS V  YTS++L  CYR GDS  GKRNYT+
Sbjct: 66  AMLLFSFVTFYTSTLLCSCYRSGDSVTGKRNYTY 99


>AT5G49630.1 | Symbols: AAP6 | amino acid permease 6 |
           chr5:20142681-20146441 REVERSE LENGTH=481
          Length = 481

 Score =  114 bits (285), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 53/104 (50%), Positives = 75/104 (72%)

Query: 11  LSHRRDSGIEEAIDGVPIQTDSKFYDDDGRLKRTGNVWTTSSHIITAVVGSGVLSLAWSI 70
           +  ++   +E++     I   +K +D+DGR KRTG   T S+HIITAV+GSGVLSLAW+I
Sbjct: 1   MEKKKSMFVEQSFPEHEIGDTNKNFDEDGRDKRTGTWMTGSAHIITAVIGSGVLSLAWAI 60

Query: 71  AQMGWIAGPGVMIFFSVVALYTSSILAECYRCGDSHFGKRNYTF 114
           AQ+GW+AGP V++ FS +  +TS++LA+CYR  D   GKRNYT+
Sbjct: 61  AQLGWVAGPAVLMAFSFITYFTSTMLADCYRSPDPVTGKRNYTY 104


>AT1G10010.1 | Symbols: AAP8, ATAAP8 | amino acid permease 8 |
           chr1:3265976-3268726 FORWARD LENGTH=475
          Length = 475

 Score =  113 bits (283), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 50/79 (63%), Positives = 64/79 (81%)

Query: 36  DDDGRLKRTGNVWTTSSHIITAVVGSGVLSLAWSIAQMGWIAGPGVMIFFSVVALYTSSI 95
           DDDGR KRTG  WT S+HIITAV+GSGVLSLAW+IAQ+GW+AG  V++ F+++  YTS++
Sbjct: 21  DDDGREKRTGTFWTASAHIITAVIGSGVLSLAWAIAQLGWVAGTTVLVAFAIITYYTSTL 80

Query: 96  LAECYRCGDSHFGKRNYTF 114
           LA+CYR  DS  G RNY +
Sbjct: 81  LADCYRSPDSITGTRNYNY 99


>AT1G58360.1 | Symbols: AAP1, NAT2 | amino acid permease 1 |
           chr1:21676623-21680313 FORWARD LENGTH=485
          Length = 485

 Score =  110 bits (276), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/94 (55%), Positives = 69/94 (73%)

Query: 21  EAIDGVPIQTDSKFYDDDGRLKRTGNVWTTSSHIITAVVGSGVLSLAWSIAQMGWIAGPG 80
           E+ D   +   +K  D+DGR KRTG   T S+HIITAV+GSGVLSLAW+IAQ+GWIAG  
Sbjct: 15  ESGDAYTVSDPTKNVDEDGREKRTGTWLTASAHIITAVIGSGVLSLAWAIAQLGWIAGTS 74

Query: 81  VMIFFSVVALYTSSILAECYRCGDSHFGKRNYTF 114
           +++ FS +  +TS++LA+CYR  D   GKRNYT+
Sbjct: 75  ILLIFSFITYFTSTMLADCYRAPDPVTGKRNYTY 108


>AT5G23810.2 | Symbols: AAP7 | amino acid permease 7 |
           chr5:8028461-8030138 FORWARD LENGTH=361
          Length = 361

 Score = 82.0 bits (201), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 54/80 (67%)

Query: 30  TDSKFYDDDGRLKRTGNVWTTSSHIITAVVGSGVLSLAWSIAQMGWIAGPGVMIFFSVVA 89
           T ++    D    RTG +WT  +HIIT V+G+GVLSLAW+ A++GWIAGP  +I F+ V 
Sbjct: 13  TPTELQLHDSVTARTGTLWTAVAHIITGVIGAGVLSLAWATAELGWIAGPAALIAFAGVT 72

Query: 90  LYTSSILAECYRCGDSHFGK 109
           L ++ +L++CYR  D + G 
Sbjct: 73  LLSAFLLSDCYRFPDPNNGP 92


>AT5G23810.1 | Symbols: AAP7 | amino acid permease 7 |
           chr5:8028461-8030730 FORWARD LENGTH=467
          Length = 467

 Score = 82.0 bits (201), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 54/80 (67%)

Query: 30  TDSKFYDDDGRLKRTGNVWTTSSHIITAVVGSGVLSLAWSIAQMGWIAGPGVMIFFSVVA 89
           T ++    D    RTG +WT  +HIIT V+G+GVLSLAW+ A++GWIAGP  +I F+ V 
Sbjct: 13  TPTELQLHDSVTARTGTLWTAVAHIITGVIGAGVLSLAWATAELGWIAGPAALIAFAGVT 72

Query: 90  LYTSSILAECYRCGDSHFGK 109
           L ++ +L++CYR  D + G 
Sbjct: 73  LLSAFLLSDCYRFPDPNNGP 92


>AT5G40780.2 | Symbols:  | lysine histidine transporter 1 |
          chr5:16323823-16327082 FORWARD LENGTH=445
          Length = 445

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/50 (40%), Positives = 33/50 (66%)

Query: 43 RTGNVWTTSSHIITAVVGSGVLSLAWSIAQMGWIAGPGVMIFFSVVALYT 92
          R    W ++ H +TA+VG+GVL L ++++Q+GW  G  V++   V+ LYT
Sbjct: 33 RNAKWWYSAFHNVTAMVGAGVLGLPYAMSQLGWGPGIAVLVLSWVITLYT 82


>AT5G40780.1 | Symbols: LHT1 | lysine histidine transporter 1 |
          chr5:16323823-16327082 FORWARD LENGTH=446
          Length = 446

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/50 (40%), Positives = 33/50 (66%)

Query: 43 RTGNVWTTSSHIITAVVGSGVLSLAWSIAQMGWIAGPGVMIFFSVVALYT 92
          R    W ++ H +TA+VG+GVL L ++++Q+GW  G  V++   V+ LYT
Sbjct: 34 RNAKWWYSAFHNVTAMVGAGVLGLPYAMSQLGWGPGIAVLVLSWVITLYT 83


>AT1G48640.1 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr1:17986358-17988991 FORWARD
           LENGTH=453
          Length = 453

 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 16/104 (15%)

Query: 9   ASLSHRRDS--GIEEAIDGVPIQTDSKFYDDDGRLKRTGNVWTTSSHIITAVVGSGVLSL 66
           +SL HR D     +E  D +PI +            R    W ++ H +TA+VG+GVL L
Sbjct: 16  SSLDHRIDELERQKEIDDWLPITSS-----------RNAKWWYSTFHNVTAMVGAGVLGL 64

Query: 67  AWSIAQMGWIAGPGVMIFFSVVALYTSSILAECYRCGDSHFGKR 110
            + +AQ+GW  G  V+I   ++ LYT   + E +       GKR
Sbjct: 65  PFFMAQLGWGPGIAVLILSWIITLYTLWQMVEMHEMVP---GKR 105