Miyakogusa Predicted Gene

Lj0g3v0196509.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0196509.1 Non Chatacterized Hit- tr|I3SD11|I3SD11_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,97.83,3e-17,
,CUFF.12443.1
         (46 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G44750.3 | Symbols: ATPUP11, PUP11 | purine permease 11 | chr...    58   1e-09
AT1G44750.1 | Symbols: ATPUP11, PUP11 | purine permease 11 | chr...    58   1e-09
AT1G44750.2 | Symbols: ATPUP11, PUP11 | purine permease 11 | chr...    58   1e-09
AT4G18210.1 | Symbols: ATPUP10, PUP10 | purine permease 10 | chr...    52   7e-08
AT4G18220.1 | Symbols:  | Drug/metabolite transporter superfamil...    50   2e-07

>AT1G44750.3 | Symbols: ATPUP11, PUP11 | purine permease 11 |
           chr1:16894257-16895168 FORWARD LENGTH=303
          Length = 303

 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/37 (70%), Positives = 32/37 (86%), Gaps = 2/37 (5%)

Query: 1   MNGVKIISMLVAIWGLASYIYQNYIDDLKAR--RTQA 35
           M+GVKI++ML+AIWG ASY+YQN+IDDLK R  R QA
Sbjct: 258 MSGVKIMAMLIAIWGFASYVYQNHIDDLKVRQARQQA 294


>AT1G44750.1 | Symbols: ATPUP11, PUP11 | purine permease 11 |
           chr1:16892688-16895168 FORWARD LENGTH=379
          Length = 379

 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/37 (70%), Positives = 32/37 (86%), Gaps = 2/37 (5%)

Query: 1   MNGVKIISMLVAIWGLASYIYQNYIDDLKAR--RTQA 35
           M+GVKI++ML+AIWG ASY+YQN+IDDLK R  R QA
Sbjct: 334 MSGVKIMAMLIAIWGFASYVYQNHIDDLKVRQARQQA 370


>AT1G44750.2 | Symbols: ATPUP11, PUP11 | purine permease 11 |
           chr1:16893825-16895168 FORWARD LENGTH=367
          Length = 367

 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/37 (70%), Positives = 32/37 (86%), Gaps = 2/37 (5%)

Query: 1   MNGVKIISMLVAIWGLASYIYQNYIDDLKAR--RTQA 35
           M+GVKI++ML+AIWG ASY+YQN+IDDLK R  R QA
Sbjct: 322 MSGVKIMAMLIAIWGFASYVYQNHIDDLKVRQARQQA 358


>AT4G18210.1 | Symbols: ATPUP10, PUP10 | purine permease 10 |
           chr4:10076175-10077495 FORWARD LENGTH=390
          Length = 390

 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 29/41 (70%)

Query: 1   MNGVKIISMLVAIWGLASYIYQNYIDDLKARRTQAVVSKSS 41
           MNG+K+ISM++AIWG  SY+YQ Y+DD   ++   + +  S
Sbjct: 336 MNGLKVISMILAIWGFTSYVYQQYLDDKNLKKNHEITTTES 376


>AT4G18220.1 | Symbols:  | Drug/metabolite transporter superfamily
           protein | chr4:10078768-10080109 FORWARD LENGTH=344
          Length = 344

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 30/41 (73%)

Query: 1   MNGVKIISMLVAIWGLASYIYQNYIDDLKARRTQAVVSKSS 41
           MNG+K+ISM++AIWG  SY+YQ Y+D+   +++  + +  S
Sbjct: 290 MNGLKVISMILAIWGFVSYVYQQYLDETNLKKSNEIPTTES 330