Miyakogusa Predicted Gene

Lj0g3v0196359.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0196359.1 Non Chatacterized Hit- tr|I1MYB3|I1MYB3_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,38.67,1e-18,LRR,Leucine-rich repeat; LEURICHRPT,NULL;
LRR_1,Leucine-rich repeat; LRRNT_2,Leucine-rich
repeat-con,CUFF.12427.1
         (256 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G23750.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    50   2e-06

>AT3G23750.1 | Symbols:  | Leucine-rich repeat protein kinase
          family protein | chr3:8558332-8561263 FORWARD
          LENGTH=928
          Length = 928

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 41 AIADDAVYMSKLLKALTPTPSGWSQNTSFCHWSGVVCDRSSRVTAI 86
          ++ADD   M  L K+  P PS WS  T FC WSGV C    RVT I
Sbjct: 22 SVADDQTAMLALAKSFNPPPSDWSSTTDFCKWSGVRC-TGGRVTTI 66